View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0172_low_19 (Length: 257)

Name: NF0172_low_19
Description: NF0172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0172_low_19
NF0172_low_19
[»] chr6 (46 HSPs)
chr6 (1-246)||(19303203-19303447)
chr6 (1-244)||(29060757-29060999)
chr6 (1-246)||(18409489-18409733)
chr6 (1-241)||(20593993-20594232)
chr6 (1-246)||(22779889-22780133)
chr6 (1-246)||(17287458-17287702)
chr6 (1-246)||(20637956-20638189)
chr6 (1-242)||(25629017-25629257)
chr6 (1-226)||(18821492-18821705)
chr6 (1-243)||(20360633-20360863)
chr6 (1-147)||(29808545-29808691)
chr6 (1-147)||(28496135-28496280)
chr6 (1-221)||(18456955-18457173)
chr6 (1-225)||(25611385-25611608)
chr6 (1-142)||(1561622-1561762)
chr6 (1-183)||(16920306-16920476)
chr6 (1-146)||(15894092-15894237)
chr6 (1-195)||(22831768-22831950)
chr6 (1-144)||(19652512-19652654)
chr6 (1-146)||(4667875-4668019)
chr6 (1-146)||(21939699-21939842)
chr6 (11-246)||(25603057-25603291)
chr6 (1-145)||(27332946-27333089)
chr6 (1-145)||(27393686-27393829)
chr6 (1-146)||(4185485-4185629)
chr6 (1-89)||(4189327-4189415)
chr6 (1-89)||(4674722-4674810)
chr6 (1-183)||(11185780-11185950)
chr6 (1-78)||(31155060-31155137)
chr6 (1-147)||(23019721-23019866)
chr6 (1-224)||(25644559-25644781)
chr6 (1-75)||(22334544-22334618)
chr6 (1-146)||(22080399-22080543)
chr6 (12-70)||(31164531-31164589)
chr6 (2-70)||(20109605-20109673)
chr6 (11-70)||(22331803-22331862)
chr6 (11-69)||(1538628-1538686)
chr6 (11-69)||(1544727-1544785)
chr6 (12-69)||(16372223-16372280)
chr6 (1-74)||(25956283-25956356)
chr6 (11-55)||(14099005-14099049)
chr6 (11-55)||(14472648-14472692)
chr6 (176-224)||(18453419-18453467)
chr6 (106-146)||(19668688-19668728)
chr6 (94-146)||(22334647-22334699)
chr6 (94-146)||(25641939-25641991)
[»] chr4 (53 HSPs)
chr4 (1-244)||(14038865-14039108)
chr4 (2-246)||(15091111-15091355)
chr4 (1-246)||(44053044-44053288)
chr4 (1-224)||(22636671-22636893)
chr4 (1-246)||(16377184-16377429)
chr4 (1-224)||(44928585-44928807)
chr4 (1-183)||(7798975-7799156)
chr4 (1-224)||(3096880-3097091)
chr4 (1-224)||(12902994-12903204)
chr4 (1-240)||(7089098-7089325)
chr4 (1-220)||(44102451-44102668)
chr4 (1-224)||(14052975-14053186)
chr4 (1-224)||(17047746-17047956)
chr4 (1-246)||(16239654-16239876)
chr4 (84-223)||(7893938-7894077)
chr4 (1-110)||(6190783-6190892)
chr4 (1-136)||(16596971-16597104)
chr4 (1-146)||(8846689-8846834)
chr4 (1-146)||(15552129-15552272)
chr4 (1-146)||(24029057-24029200)
chr4 (2-235)||(15464592-15464825)
chr4 (2-224)||(52242856-52243077)
chr4 (1-146)||(13812471-13812614)
chr4 (1-146)||(20156952-20157095)
chr4 (1-147)||(12774313-12774457)
chr4 (2-146)||(22633876-22634018)
chr4 (1-220)||(21815294-21815511)
chr4 (1-147)||(21814965-21815109)
chr4 (1-147)||(21818387-21818531)
chr4 (105-240)||(23374125-23374259)
chr4 (1-146)||(15099665-15099809)
chr4 (1-74)||(39705950-39706023)
chr4 (1-74)||(43198250-43198323)
chr4 (58-146)||(3332201-3332287)
chr4 (11-55)||(17046721-17046765)
chr4 (1-72)||(15868297-15868368)
chr4 (1-74)||(15190703-15190776)
chr4 (11-70)||(14685534-14685593)
chr4 (2-72)||(13436-13506)
chr4 (6-70)||(14679325-14679389)
chr4 (11-70)||(23838796-23838855)
chr4 (11-69)||(386038-386096)
chr4 (140-226)||(6190697-6190782)
chr4 (11-69)||(7900855-7900913)
chr4 (1-43)||(13844956-13844998)
chr4 (11-69)||(15321778-15321836)
chr4 (2-44)||(32306582-32306624)
chr4 (1-43)||(32851868-32851910)
chr4 (11-69)||(51493502-51493560)
chr4 (5-70)||(40471837-40471902)
chr4 (2-75)||(53081760-53081833)
chr4 (11-55)||(16956334-16956378)
chr4 (5-69)||(40478511-40478575)
[»] chr8 (48 HSPs)
chr8 (1-246)||(6759471-6759716)
chr8 (1-246)||(16092003-16092247)
chr8 (1-246)||(18878899-18879143)
chr8 (1-246)||(22875280-22875524)
chr8 (1-246)||(28648706-28648950)
chr8 (1-246)||(20536423-20536667)
chr8 (1-220)||(23406622-23406840)
chr8 (1-224)||(41598421-41598643)
chr8 (1-246)||(18818072-18818315)
chr8 (1-246)||(22626950-22627194)
chr8 (1-246)||(21923590-21923834)
chr8 (1-246)||(23648768-23649012)
chr8 (1-183)||(21918672-21918843)
chr8 (1-224)||(25362813-25363024)
chr8 (1-125)||(7373084-7373208)
chr8 (1-146)||(5865939-5866082)
chr8 (1-224)||(31971492-31971703)
chr8 (5-224)||(16199324-16199530)
chr8 (1-146)||(17141229-17141372)
chr8 (1-146)||(21249697-21249840)
chr8 (1-146)||(21255535-21255678)
chr8 (1-146)||(21491308-21491451)
chr8 (10-89)||(21674076-21674155)
chr8 (1-74)||(45130693-45130766)
chr8 (1-146)||(26355360-26355504)
chr8 (1-146)||(39834147-39834291)
chr8 (1-147)||(19801089-19801234)
chr8 (1-74)||(38854913-38854986)
chr8 (142-246)||(7372985-7373088)
chr8 (2-71)||(20499049-20499118)
chr8 (10-74)||(23760511-23760575)
chr8 (1-68)||(21414889-21414956)
chr8 (1-71)||(6520757-6520827)
chr8 (2-71)||(37116813-37116882)
chr8 (2-70)||(17266579-17266647)
chr8 (11-70)||(20527812-20527871)
chr8 (138-201)||(45130797-45130859)
chr8 (1-43)||(13507671-13507713)
chr8 (1-43)||(13597203-13597245)
chr8 (2-68)||(16799958-16800024)
chr8 (10-44)||(17085770-17085804)
chr8 (11-69)||(18865695-18865753)
chr8 (170-224)||(22963249-22963303)
chr8 (10-72)||(24353488-24353550)
chr8 (2-71)||(982989-983058)
chr8 (5-69)||(16882850-16882914)
chr8 (106-146)||(37116664-37116704)
chr8 (2-70)||(40492438-40492506)
[»] chr3 (68 HSPs)
chr3 (1-246)||(14973069-14973313)
chr3 (2-246)||(40213384-40213627)
chr3 (1-246)||(18438749-18438993)
chr3 (1-246)||(25476047-25476291)
chr3 (1-246)||(17488071-17488316)
chr3 (1-246)||(11424425-11424669)
chr3 (9-246)||(13442489-13442725)
chr3 (1-246)||(14572803-14573047)
chr3 (1-246)||(26687102-26687346)
chr3 (1-246)||(14576495-14576739)
chr3 (1-222)||(17247948-17248168)
chr3 (1-246)||(17499553-17499798)
chr3 (1-246)||(20698109-20698342)
chr3 (1-246)||(23083023-23083267)
chr3 (1-224)||(53070361-53070582)
chr3 (62-224)||(43841169-43841330)
chr3 (1-146)||(12340068-12340211)
chr3 (1-147)||(12933972-12934117)
chr3 (12-146)||(14669076-14669208)
chr3 (1-142)||(9513228-9513369)
chr3 (1-142)||(9521203-9521344)
chr3 (1-147)||(32307983-32308127)
chr3 (2-146)||(12852027-12852169)
chr3 (1-147)||(49667746-49667890)
chr3 (12-146)||(14665921-14666053)
chr3 (12-146)||(14735434-14735566)
chr3 (1-90)||(14179693-14179781)
chr3 (1-246)||(30030054-30030287)
chr3 (1-143)||(49389306-49389446)
chr3 (1-146)||(13209990-13210133)
chr3 (1-160)||(12399506-12399654)
chr3 (1-146)||(16097645-16097789)
chr3 (13-224)||(42386648-42386858)
chr3 (1-116)||(4588477-4588590)
chr3 (5-147)||(1644349-1644489)
chr3 (2-147)||(324549-324693)
chr3 (2-224)||(52523390-52523611)
chr3 (1-66)||(43842572-43842637)
chr3 (1-89)||(16104151-16104239)
chr3 (1-214)||(2050863-2051073)
chr3 (1-58)||(17247182-17247239)
chr3 (132-240)||(16796768-16796875)
chr3 (1-136)||(16809724-16809844)
chr3 (1-46)||(12171779-12171824)
chr3 (1-171)||(1465071-1465240)
chr3 (1-143)||(14234809-14234949)
chr3 (1-74)||(15471310-15471383)
chr3 (2-44)||(22109938-22109980)
chr3 (2-43)||(43927597-43927638)
chr3 (11-70)||(839609-839668)
chr3 (1-72)||(12378384-12378455)
chr3 (1-44)||(14501615-14501658)
chr3 (1-44)||(23275157-23275200)
chr3 (11-70)||(24188140-24188199)
chr3 (11-70)||(55149341-55149400)
chr3 (2-44)||(316612-316654)
chr3 (2-44)||(45797659-45797701)
chr3 (106-147)||(37250932-37250973)
chr3 (11-55)||(4291150-4291194)
chr3 (5-69)||(15691955-15692019)
chr3 (11-55)||(17710275-17710319)
chr3 (94-146)||(19725668-19725720)
chr3 (106-146)||(22110116-22110156)
chr3 (5-69)||(23704446-23704510)
chr3 (5-69)||(23722902-23722966)
chr3 (5-69)||(23741358-23741422)
chr3 (11-55)||(41092030-41092074)
chr3 (5-69)||(41201475-41201539)
[»] chr5 (49 HSPs)
chr5 (6-246)||(9078167-9078406)
chr5 (1-246)||(21985809-21986053)
chr5 (1-246)||(1096682-1096926)
chr5 (1-246)||(24529435-24529680)
chr5 (1-246)||(13095709-13095953)
chr5 (1-246)||(25421747-25421991)
chr5 (1-246)||(25431609-25431853)
chr5 (1-246)||(13025525-13025769)
chr5 (1-246)||(24493783-24494027)
chr5 (1-246)||(23390158-23390402)
chr5 (1-224)||(11580907-11581129)
chr5 (1-224)||(36154490-36154712)
chr5 (1-246)||(8286515-8286748)
chr5 (1-201)||(21292643-21292831)
chr5 (1-240)||(22075240-22075467)
chr5 (1-146)||(22119855-22119998)
chr5 (2-219)||(22144292-22144508)
chr5 (1-146)||(19660499-19660643)
chr5 (1-142)||(21565863-21566003)
chr5 (2-170)||(22107047-22107204)
chr5 (1-134)||(21871233-21871365)
chr5 (1-134)||(21875513-21875645)
chr5 (1-146)||(24766999-24767142)
chr5 (1-146)||(22959195-22959339)
chr5 (1-141)||(19669219-19669359)
chr5 (1-171)||(21329157-21329326)
chr5 (1-171)||(5888837-5889006)
chr5 (5-74)||(21498683-21498752)
chr5 (2-44)||(20026526-20026568)
chr5 (105-154)||(21501919-21501968)
chr5 (107-147)||(20026706-20026746)
chr5 (5-69)||(41294112-41294176)
chr5 (11-70)||(21294947-21295006)
chr5 (11-69)||(15441638-15441696)
chr5 (11-69)||(25406789-25406847)
chr5 (12-70)||(25535351-25535409)
chr5 (2-44)||(26732421-26732463)
chr5 (2-44)||(26740234-26740276)
chr5 (1-74)||(21741205-21741278)
chr5 (3-44)||(22177807-22177848)
chr5 (11-68)||(22588459-22588516)
chr5 (12-69)||(23336973-23337030)
chr5 (2-43)||(25574056-25574097)
chr5 (2-43)||(25575249-25575290)
chr5 (2-43)||(25576442-25576483)
chr5 (2-147)||(26011697-26011841)
chr5 (5-69)||(17284430-17284494)
chr5 (11-55)||(19992261-19992305)
chr5 (11-55)||(22334501-22334545)
[»] chr7 (53 HSPs)
chr7 (1-246)||(38227695-38227939)
chr7 (1-246)||(3564026-3564270)
chr7 (1-246)||(15143699-15143943)
chr7 (1-246)||(9509404-9509648)
chr7 (1-246)||(12699047-12699291)
chr7 (1-224)||(17061622-17061844)
chr7 (1-240)||(16385920-16386147)
chr7 (1-224)||(44116742-44116963)
chr7 (1-201)||(40443649-40443836)
chr7 (1-224)||(27847506-27847717)
chr7 (1-224)||(12756379-12756600)
chr7 (1-146)||(28504963-28505106)
chr7 (2-224)||(12255454-12255675)
chr7 (1-142)||(15754549-15754689)
chr7 (1-142)||(39267308-39267447)
chr7 (1-240)||(26212217-26212444)
chr7 (1-146)||(9751212-9751355)
chr7 (1-146)||(18302494-18302637)
chr7 (1-146)||(44014489-44014633)
chr7 (1-146)||(2831968-2832110)
chr7 (1-146)||(34201099-34201242)
chr7 (1-147)||(810791-810936)
chr7 (2-222)||(2279781-2280000)
chr7 (10-174)||(16056615-16056778)
chr7 (112-243)||(10589256-10589386)
chr7 (1-174)||(22073203-22073375)
chr7 (1-171)||(68036-68205)
chr7 (1-201)||(16219378-16219578)
chr7 (1-74)||(47832194-47832267)
chr7 (1-46)||(11995720-11995765)
chr7 (10-74)||(16324392-16324456)
chr7 (1-42)||(18006059-18006100)
chr7 (5-74)||(9389361-9389430)
chr7 (3-72)||(14045212-14045281)
chr7 (3-72)||(14355242-14355311)
chr7 (1-74)||(21064824-21064897)
chr7 (1-44)||(2529639-2529682)
chr7 (13-72)||(12901793-12901852)
chr7 (11-70)||(14953560-14953619)
chr7 (11-70)||(14959526-14959585)
chr7 (11-70)||(26420340-26420399)
chr7 (11-70)||(44408043-44408102)
chr7 (2-44)||(9177252-9177294)
chr7 (2-44)||(11768526-11768568)
chr7 (2-68)||(16092185-16092251)
chr7 (170-224)||(17017297-17017351)
chr7 (3-72)||(1867650-1867719)
chr7 (13-70)||(11547953-11548010)
chr7 (13-70)||(11554549-11554606)
chr7 (2-43)||(15008107-15008148)
chr7 (11-55)||(11238655-11238699)
chr7 (5-69)||(20702669-20702733)
chr7 (5-69)||(32768038-32768102)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-246)||(16261-16506)
[»] chr1 (48 HSPs)
chr1 (1-246)||(50209875-50210119)
chr1 (1-246)||(34509995-34510239)
chr1 (1-246)||(22532484-22532728)
chr1 (1-225)||(433243-433466)
chr1 (1-246)||(22354234-22354478)
chr1 (1-224)||(20135424-20135646)
chr1 (1-240)||(27250402-27250629)
chr1 (1-246)||(22355847-22356080)
chr1 (1-246)||(22357533-22357766)
chr1 (1-240)||(20846892-20847119)
chr1 (1-240)||(21026901-21027128)
chr1 (1-169)||(33681301-33681468)
chr1 (2-183)||(38801065-38801234)
chr1 (1-146)||(20918917-20919060)
chr1 (1-147)||(21754350-21754494)
chr1 (1-146)||(20091136-20091281)
chr1 (1-174)||(52927643-52927815)
chr1 (3-146)||(20248592-20248734)
chr1 (1-145)||(22237946-22238088)
chr1 (1-145)||(22921529-22921672)
chr1 (1-71)||(21162117-21162187)
chr1 (1-46)||(21301200-21301245)
chr1 (107-222)||(16758890-16759005)
chr1 (106-224)||(26065176-26065295)
chr1 (5-146)||(28194114-28194254)
chr1 (1-74)||(43697746-43697819)
chr1 (113-224)||(35260852-35260964)
chr1 (5-72)||(35981352-35981419)
chr1 (2-72)||(21895895-21895965)
chr1 (2-75)||(16367873-16367946)
chr1 (2-71)||(35260718-35260787)
chr1 (11-70)||(20524899-20524958)
chr1 (11-70)||(21438157-21438216)
chr1 (11-70)||(23763574-23763633)
chr1 (13-72)||(26065382-26065441)
chr1 (1-72)||(41049630-41049701)
chr1 (2-68)||(16381632-16381698)
chr1 (1-71)||(16759115-16759185)
chr1 (11-69)||(19063884-19063942)
chr1 (11-69)||(19111774-19111832)
chr1 (1-87)||(21342521-21342607)
chr1 (1-87)||(21347386-21347472)
chr1 (2-72)||(21861157-21861227)
chr1 (2-44)||(52940464-52940506)
chr1 (2-75)||(16093479-16093552)
chr1 (105-170)||(21162056-21162121)
chr1 (170-222)||(21342332-21342384)
chr1 (170-222)||(21347197-21347249)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-246)||(33156-33401)
scaffold0122 (1-246)||(25727-25971)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-246)||(4722-4967)
scaffold0228 (1-246)||(12304-12549)
scaffold0228 (1-246)||(22256-22501)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-246)||(16877-17121)
scaffold0056 (1-73)||(79024-79096)
scaffold0056 (121-224)||(79110-79213)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-246)||(38975-39218)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-246)||(52128-52371)
scaffold0011 (1-240)||(167652-167879)
[»] chr2 (29 HSPs)
chr2 (1-246)||(23660237-23660481)
chr2 (1-246)||(27753790-27754034)
chr2 (1-246)||(22737842-22738086)
chr2 (1-226)||(32451591-32451815)
chr2 (1-221)||(22730895-22731114)
chr2 (1-240)||(298477-298714)
chr2 (1-246)||(23076657-23076899)
chr2 (1-246)||(22337330-22337574)
chr2 (1-246)||(23286076-23286309)
chr2 (1-224)||(37789-38000)
chr2 (1-146)||(23071625-23071768)
chr2 (1-183)||(20309383-20309553)
chr2 (1-145)||(22133879-22134020)
chr2 (1-240)||(23654072-23654286)
chr2 (3-143)||(28406297-28406436)
chr2 (2-222)||(23708282-23708500)
chr2 (1-64)||(28291964-28292027)
chr2 (1-74)||(25176228-25176301)
chr2 (170-220)||(19672068-19672118)
chr2 (2-70)||(23207744-23207812)
chr2 (2-46)||(39827602-39827646)
chr2 (11-70)||(24503473-24503532)
chr2 (11-69)||(12829434-12829492)
chr2 (2-72)||(22412722-22412792)
chr2 (2-44)||(23005221-23005263)
chr2 (2-44)||(34137412-34137454)
chr2 (94-146)||(22740716-22740768)
chr2 (11-55)||(23171416-23171460)
chr2 (11-55)||(23582673-23582717)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-246)||(20618-20862)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-201)||(164-363)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-246)||(13307-13551)
scaffold0175 (1-145)||(34437-34579)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-226)||(51546-51770)
scaffold0034 (2-171)||(32826-32994)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-246)||(124800-125041)
scaffold0021 (1-89)||(62932-63020)
scaffold0021 (106-147)||(136132-136173)
scaffold0021 (106-147)||(144840-144881)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-243)||(339613-339853)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-246)||(557-801)
scaffold0292 (2-246)||(3685-3928)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-246)||(40127-40370)
[»] scaffold0026 (5 HSPs)
scaffold0026 (3-246)||(40072-40313)
scaffold0026 (23-131)||(26555-26662)
scaffold0026 (1-88)||(39593-39680)
scaffold0026 (15-146)||(59179-59308)
scaffold0026 (143-246)||(26110-26213)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-246)||(23097-23341)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-220)||(23964-24181)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-246)||(8690-8934)
[»] scaffold0016 (3 HSPs)
scaffold0016 (1-246)||(2066-2310)
scaffold0016 (1-146)||(207181-207324)
scaffold0016 (2-43)||(119214-119255)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-221)||(8198-8413)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-246)||(5783-6027)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-246)||(10378-10617)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-224)||(32621-32843)
scaffold0120 (1-224)||(46162-46384)
scaffold0120 (8-224)||(16324-16539)
[»] scaffold0130 (2 HSPs)
scaffold0130 (67-246)||(28045-28223)
scaffold0130 (1-72)||(28924-28995)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-195)||(1740-1932)
[»] scaffold0413 (2 HSPs)
scaffold0413 (1-224)||(15277-15499)
scaffold0413 (2-71)||(13033-13102)
[»] scaffold0141 (1 HSPs)
scaffold0141 (72-246)||(39691-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-246)||(74948-75121)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-240)||(722-949)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-164)||(675-837)
scaffold0540 (176-246)||(2987-3057)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-246)||(13426-13659)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-147)||(20426-20571)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-224)||(10099-10310)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-243)||(11186-11416)
scaffold0235 (1-44)||(14055-14098)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-217)||(17024-17239)
scaffold0142 (39-146)||(7471-7576)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-246)||(4738-4982)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-125)||(17670-17794)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-245)||(624-868)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-173)||(725-886)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-241)||(2172-2400)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-217)||(13739-13943)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-241)||(6830-7058)
[»] scaffold0114 (1 HSPs)
scaffold0114 (3-201)||(15140-15326)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-224)||(3718-3929)
scaffold0165 (1-224)||(7782-7993)
scaffold0165 (2-44)||(27305-27347)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-146)||(2107-2250)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-224)||(12166-12387)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-147)||(32397-32542)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-154)||(19573-19725)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-224)||(4804-5015)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-224)||(1151-1362)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-224)||(172-384)
scaffold0358 (1-224)||(4948-5160)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-163)||(32361-32512)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-183)||(51857-52023)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-147)||(132967-133112)
scaffold0028 (11-69)||(57408-57466)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-173)||(5135-5296)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-180)||(16560-16727)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-142)||(28942-29081)
scaffold0218 (106-174)||(7841-7909)
[»] scaffold1984 (1 HSPs)
scaffold1984 (10-154)||(437-580)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-93)||(18620-18712)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-143)||(12471-12611)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-173)||(47273-47434)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-146)||(15974-16117)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-146)||(7956-8099)
scaffold0075 (2-72)||(53134-53204)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-147)||(28471-28616)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-146)||(7126-7270)
scaffold0556 (1-147)||(8330-8475)
[»] scaffold0037 (1 HSPs)
scaffold0037 (12-146)||(80005-80137)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-146)||(10226-10369)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-146)||(9496-9639)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-147)||(2465-2609)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-220)||(20088-20305)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-135)||(101721-101853)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-79)||(2747-2825)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-146)||(9391-9535)
[»] scaffold0347 (1 HSPs)
scaffold0347 (12-146)||(344-476)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-146)||(45451-45596)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-146)||(24313-24456)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-146)||(161000-161144)
scaffold0001 (2-44)||(446965-447007)
scaffold0001 (2-44)||(497896-497938)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-246)||(21126-21349)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-147)||(1963-2108)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-71)||(13270-13340)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-147)||(10842-10987)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-68)||(6490-6557)
scaffold0247 (106-170)||(6561-6625)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-74)||(3318-3391)
[»] scaffold0357 (3 HSPs)
scaffold0357 (108-224)||(15866-15983)
scaffold0357 (157-224)||(13367-13435)
scaffold0357 (2-72)||(13595-13665)
[»] scaffold0138 (3 HSPs)
scaffold0138 (1-174)||(13227-13399)
scaffold0138 (12-70)||(29892-29950)
scaffold0138 (12-70)||(41888-41946)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-64)||(10540-10603)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-147)||(7719-7864)
[»] scaffold0106 (4 HSPs)
scaffold0106 (83-201)||(1546-1663)
scaffold0106 (83-201)||(7523-7640)
scaffold0106 (2-43)||(1692-1733)
scaffold0106 (2-43)||(7669-7710)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-73)||(2306-2378)
[»] scaffold0621 (1 HSPs)
scaffold0621 (10-145)||(6852-6987)
[»] scaffold0555 (3 HSPs)
scaffold0555 (1-142)||(897-1038)
scaffold0555 (1-60)||(10230-10289)
scaffold0555 (105-147)||(10305-10347)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-66)||(690-755)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-74)||(5979-6052)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-74)||(43446-43519)
scaffold0116 (1-74)||(47366-47439)
[»] scaffold0010 (4 HSPs)
scaffold0010 (5-146)||(130222-130362)
scaffold0010 (106-224)||(60479-60598)
scaffold0010 (2-44)||(60301-60343)
scaffold0010 (11-55)||(242435-242479)
[»] scaffold0320 (1 HSPs)
scaffold0320 (2-74)||(12381-12453)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-74)||(15492-15565)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-69)||(5784-5852)
[»] scaffold0012 (2 HSPs)
scaffold0012 (10-74)||(227878-227942)
scaffold0012 (170-224)||(225644-225698)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-143)||(6931-7072)
scaffold0333 (1-143)||(14311-14452)
[»] scaffold0022 (3 HSPs)
scaffold0022 (2-72)||(80726-80796)
scaffold0022 (2-75)||(128557-128630)
scaffold0022 (106-146)||(128735-128775)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-37)||(10934-10970)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-68)||(2245-2312)
[»] scaffold0123 (1 HSPs)
scaffold0123 (2-75)||(25567-25640)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-74)||(24182-24255)
[»] scaffold0040 (1 HSPs)
scaffold0040 (13-72)||(103257-103316)
[»] scaffold0004 (2 HSPs)
scaffold0004 (11-70)||(58102-58161)
scaffold0004 (2-68)||(332784-332850)
[»] scaffold0601 (1 HSPs)
scaffold0601 (2-72)||(7118-7188)
[»] scaffold0525 (1 HSPs)
scaffold0525 (11-69)||(3560-3618)
[»] scaffold0259 (1 HSPs)
scaffold0259 (11-69)||(10541-10599)
[»] scaffold0233 (1 HSPs)
scaffold0233 (11-69)||(14224-14282)
[»] scaffold0109 (1 HSPs)
scaffold0109 (11-69)||(27006-27064)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-44)||(55271-55313)
[»] scaffold0029 (1 HSPs)
scaffold0029 (11-69)||(125797-125855)
[»] scaffold0013 (1 HSPs)
scaffold0013 (11-69)||(9704-9762)
[»] scaffold0005 (2 HSPs)
scaffold0005 (2-72)||(268116-268186)
scaffold0005 (5-69)||(307460-307524)


Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19303203 - 19303447
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| |     
T  19303203 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaaa 19303301  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19303302 tctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 19303401  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19303402 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 19303447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 29060999 - 29060757
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| |     
T  29060999 cttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 29060901  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  29060900 tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 29060801  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgat 244  Q
    |||||||| ||||||||||||||| | ||||| |||||||||||    
T  29060800 gctaagagctgaaccttggggtagtattgagacttaatgatgat 29060757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18409489 - 18409733
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  18409489 cttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattt-agaatgaaactttttgaat 18409587  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||| || ||| |||| ||||    
T  18409588 tctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgcacgagtt 18409687  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
      | ||||||||||||| |||||| | ||||| |||||||||||||    
T  18409688 attgagagttgaaccttagggtagtattgagacttaatgatgatgt 18409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 20594232 - 20593993
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||| |||||||||||  ||||||||| | |||||||| ||||||||||||||||||||||| |||||| |||||||||| |     
T  20594232 cttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattgtagaat-aaacttttggaaa 20594134  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  20594133 tctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 20594034  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    | |||| ||||||||||||||||| | ||||| ||||||||    
T  20594033 gttaagggttgaaccttggggtagtattgagacttaatgat 20593993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22779889 - 22780133
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  22779889 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 22779988  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||| |||||||||| || |||| |||||||| |||||||||| ||| |||||||||||| | ||||||| ||||| || || ||| |||||||||    
T  22779989 tctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgttagg-ttttgtgacctttgttgcacaagtt 22780087  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||  |||||||||||||||||||| |   ||| |||||||||||||    
T  22780088 gccgagagttgaaccttggggtagtataaagacttaatgatgatgt 22780133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17287458 - 17287702
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  17287458 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaacttgtgggat 17287557  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||| |||||||||| ||||  |||||||||   |||| ||||||||||||||||||||| |||||||||  ||||| |||| ||| |||| ||||    
T  17287558 tctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgttagg-gtttgctatctttgttgcacgagtt 17287656  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||||| ||||| ||||||| |||||    
T  17287657 gttgagagttgaaccttggggtagcattgagacttaatgaggatgt 17287702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20637956 - 20638189
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  20637956 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 20638044  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| ||||    
T  20638045 tctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagtt 20638143  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| || || | ||| |||||||||||||    
T  20638144 gtcgagagttgaaccttgggataacattaagacttaatgatgatgt 20638189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 25629017 - 25629257
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| | || || |||| ||||| |||| |||||||||||||  | ||||||||||||||||||||||||| |||||||||| ||||||||| |||    
T  25629017 cttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattttagaat-aaacttttgtgat 25629115  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||| |||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| ||||    
T  25629116 tatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagtt 25629215  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatg 242  Q
    | |||||||||||||||||||||| | ||||| |||||||||    
T  25629216 gttaagagttgaaccttggggtagtattgagacttaatgatg 25629257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18821492 - 18821705
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||           |||||||| ||||||    
T  18821492 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 18821580  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  18821581 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 18821679  T
Q  201 gctaagagttgaaccttggggtagca 226  Q
    |   ||||||||||||||||||||||    
T  18821680 gtcgagagttgaaccttggggtagca 18821705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 20360633 - 20360863
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  20360633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 20360721  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  20360722 tctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagg-ttttgcgacctttgttgcacgagtt 20360820  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatga 243  Q
    | | ||  ||||||||| |||||| | | ||| ||||||||||    
T  20360821 gttgaggattgaacctttgggtagtattaagacttaatgatga 20360863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29808545 - 29808691
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaaga-ttttagaatgaaacttttggga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  29808545 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaac-tttggga 29808643  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||||||||||||||||||  |||||||||||||||| ||||||||||    
T  29808644 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28496135 - 28496280
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||||||||||||||| ||     
T  28496135 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaaga-cttagaatgaaacttttgagaa 28496233  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||    
T  28496234 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18457173 - 18456955
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |  | || |||||| ||||||| |||     
T  18457173 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attaattaagaatg-aactttttggaa 18457076  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||| ||||  ||||| |||||||||| ||||||||||  ||||   |||||  |||||||| ||||||||||||||| |||||||| |||    
T  18457075 gctgacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgttcaggattttgcgatctttgtcgcacgagt 18456977  T
Q  200 tgctaagagttgaaccttgggg 221  Q
     | | |||||||||||||||||    
T  18456976 cgttgagagttgaaccttgggg 18456955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 25611385 - 25611608
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttggga 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  ||||| || ||||||||| |||||||||||  ||||||||||||   || |||    
T  25611385 cttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaaga-cttagaatgaaacaacttagga 25611483  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||  | |||||||||||||| |||||||||  |  |   |||||||||| |||| ||||  ||||||||| |||||||  |||    
T  25611484 ttctgacctgaactcgccatggagagcagaggctctcgcctcgcgagctagtctagaacagagtgcattgtgagga-cttgcgatctgtgtcgcatgagt 25611582  T
Q  200 tgctaagagttgaaccttggggtagc 225  Q
    | || ||||||||||||| |||||||    
T  25611583 tacttagagttgaacctttgggtagc 25611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1561762 - 1561622
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatg-aaacttttggga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |  |||||||| ||||||||| ||    
T  1561762 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaa-aacttagaatgaaaacttttgaga 1561664  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
     ||||||| ||||| ||||| ||||||| |||||||| |||||    
T  1561663 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16920306 - 16920476
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||||||| || |||||| ||||||||           | |||||| ||| ||    
T  16920306 cttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctggaa-----------ttaaacttatggaat 16920394  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||| |||| |||||| |||||||||||    
T  16920395 tctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgtt-ggattttgcga 16920476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15894092 - 15894237
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaa-cttttggga 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  |||||||  ||||||||| |||||||||||  |||||||||||    ||||||    
T  15894092 cttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaaga-cttagaatgaaagaacttggga 15894190  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||    
T  15894191 ttctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 22831950 - 22831768
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||  ||||||||||||||| |||||||  | |||| ||| | ||||||||||||||||           | |||||  ||||||    
T  22831950 cttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctggaa-----------ttaaactgatgggat 22831862  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcac 195  Q
    ||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||| || ||||||||    
T  22831861 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgtt-ggattttgcgacctttgtcgcac 22831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19652654 - 19652512
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||  |||  | ||    
T  19652654 cttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaat 19652555  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcg 144  Q
    | | ||||||||||||||  ||||| |||||||||| |||||||    
T  19652554 tgt-acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4667875 - 4668019
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||||||||| || ||||| ||     
T  4667875 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatg-aatttttgtga- 4667972  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||||||||||||||  ||||| |||||||||| |||||||||    
T  4667973 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21939842 - 21939699
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||  |||||||||||||||||| ||||| |||||||||| |||||||| |||||||||| ||||||||||  ||||||| ||||||| | ||     
T  21939842 cttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaaga-cttagaataaaactttggagaa 21939744  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  21939743 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 25603057 - 25603291
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttgggattctgacctg 109  Q
    |||||||||||||||||||||||||||||||||||  ||||| |  ||||||||| |||||||||||  ||||||||||||   || |||||||||| ||    
T  25603057 tttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaaga-cttagaatgaaacaacttaggattctgacttg 25603155  T
Q  110 aactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagt 209  Q
    ||||| |||  |||||||||||||||| ||||| |||  |  |   |||||||||| |||| ||||  ||||||||| |||||||  ||||||| |||||    
T  25603156 aactcaccatggcgagcagaggctctcgcctcgtgagctagtctagaacagagtgcattgtgagga-cttgcgatctgtgtcgcatgagttgcttagagt 25603254  T
Q  210 tgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||| |||||||  | ||| ||||||| |||||    
T  25603255 tgaacctttgggtagctttaagacttaatgacgatgt 25603291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27332946 - 27333089
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||| || | ||||||||| |||||||||||||||||||||||||||  ||||| ||     
T  27332946 cttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaag-ttttgtgag 27333044  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcga 145  Q
    |   ||||||||||||||  ||||| |||||||||| ||||||||    
T  27333045 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27393686 - 27393829
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||| || | ||||||||| |||||||||||||||||||||||||||  ||||| ||     
T  27393686 cttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaag-ttttgtgag 27393784  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcga 145  Q
    |   ||||||||||||||  ||||| |||||||||| ||||||||    
T  27393785 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4185485 - 4185629
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||| |||||| ||||||||| ||||| ||| ||||||||| |||||||||||||||||||| ||||||||| || ||||| ||     
T  4185485 cttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtttagaatg-aatttttgtga- 4185582  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||||||||||||||  ||||| |||||||||| |||||||||    
T  4185583 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4189415 - 4189327
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaa 89  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| ||||||||||| |||||||||||    
T  4189415 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa 4189327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4674722 - 4674810
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaa 89  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| ||||||||||| |||||||||||    
T  4674722 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa 4674810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 11185950 - 11185780
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||| |||| |||||||  | || ||||| | ||||||||||||||||           | |||||| ||||||    
T  11185950 cttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctggaa-----------ttaaacttatgggat 11185862  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||| ||||||||||||||| |||||||||||| ||| ||||| |||||||||||||||| |||| ||||||| ||||||||||    
T  11185861 tctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgtta-gattttgcga 11185780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31155060 - 31155137
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagat 78  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  31155060 cttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23019866 - 23019721
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| || | |||| |||||||||||||||||   ||| |||||| || ||||||||     
T  23019866 cttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaatattttaagaatg-aatttttgggag 23019768  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |   ||||||||||||||  ||||| |||||| ||  ||||||||||    
T  23019767 ttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagt 23019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 25644781 - 25644559
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||  ||||| |||   |||||||||| || | |||| |||||||||||||| ||   ||| |||||| |  ||||||||     
T  25644781 cttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggat-ttttgggag 25644683  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |   ||| |||||||||| |||||| |||||| ||| ||||||||||  ||| |   |||| ||| |  ||||| ||||||||||| |||||||| ||||    
T  25644682 ttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtttttgcgatctttgtcgcacgagtt 25644583  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    ||| ||||||||||||||||||||    
T  25644582 gctgagagttgaaccttggggtag 25644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22334544 - 22334618
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaa 75  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  |||||||  ||||||||| |||||||||    
T  22334544 cttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaa 22334618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22080399 - 22080543
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||| || || |  ||| | |||||||||||||||   ||| |||| | ||||| |||||     
T  22080399 cttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacg-aacttatgggag 22080497  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   ||||||||||||||  ||||| |||||||||| |||||||||    
T  22080498 ttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 31164531 - 31164589
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| ||||||||| ||||    
T  31164531 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 20109673 - 20109605
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||| || ||||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 22331862 - 22331803
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  22331862 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 16372280 - 16372223
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||| |||| ||||||||||| | |||||||| |  ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtaggacaagattgaacc 16372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25956283 - 25956356
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||  ||||||||||||||||||||||||| | |||| | || || | |||| ||||||| |||||||||    
T  25956283 cttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctggaa 25956356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 14099049 - 14099005
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  14099049 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 14472692 - 14472648
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  14472692 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14472648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 18453467 - 18453419
Alignment:
Q  176 ttttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  18453467 ttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtag 18453419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 19668728 - 19668688
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||| |||||| |||||||||| |||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 19668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22334647 - 22334699
Alignment:
Q  94 ttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||||| |||||||||  | ||||||| |||||| |||||||||    
T  22334647 ttgggattctgacctaaactcgccatggtgagcagatgctctcgcctcgcgag 22334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 25641939 - 25641991
Alignment:
Q  94 ttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||| |||| | |||||||||||| ||||||||| |||||| |||||||||    
T  25641939 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14039108 - 14038865
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |     
T  14039108 cttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaaa 14039009  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14039008 tctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 14038909  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgat 244  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  14038908 gctaagagttgaaccttggggtagtattgagacttaatgatgat 14038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 15091355 - 15091111
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  15091355 ttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaat 15091256  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  15091255 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttt 15091156  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||||    
T  15091155 ctaagagttgaaccttggggtagtattgagacttaatgaagatgt 15091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44053288 - 44053044
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||    
T  44053288 cttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtgggat 44053189  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| ||||    
T  44053188 tctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagtt 44053090  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| ||||| | ||| |||||||||||||    
T  44053089 gtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 44053044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22636893 - 22636671
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  22636893 cttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattgtagaatgaaacttgtgggat 22636794  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| ||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  22636793 tctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagtt 22636695  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||| ||||||||||||||||    
T  22636694 gttgagaattgaaccttggggtag 22636671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16377184 - 16377429
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||| | |||||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||  ||||||||| |||||||||     
T  16377184 cttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaa-cttttgggaa 16377282  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag-t 199  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| | || ||| |||| || |    
T  16377283 tctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgcacgagtt 16377382  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |  | |||||||||||||||||||| | ||||| |||||||||||||    
T  16377383 ttatgagagttgaaccttggggtagtattgagacttaatgatgatgt 16377429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 44928585 - 44928807
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  44928585 cttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttgggaa 44928683  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||||||||||  ||||| ||| |  ||||||||||||||||| |||||||| |||     
T  44928684 tctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtc 44928783  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | |||||||||||||| |||||    
T  44928784 gttgagagttgaaccttgtggtag 44928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7799156 - 7798975
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||   ||||||| |||||||||||||||||||| || ||||||||||||| | | ||    
T  7799156 cttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttgtagaatgaaacttgtagtat 7799057  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  7799056 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgttagg-ttttgcga 7798975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 3097091 - 3096880
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  3097091 cttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 3097003  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  3097002 tctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 3096904  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||||| ||||||    
T  3096903 gtcgagagttgaacctttgggtag 3096880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 12903204 - 12902994
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  12903204 cttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 12903117  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| || |    
T  12903116 tctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagct 12903018  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  12903017 gttgagagttgaacctttgggtag 12902994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7089325 - 7089098
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  7089325 cttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttatgggat 7089237  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||| || ||| |||  ||||    
T  7089236 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgtta-gattttgcgacctttgttgcaagagtt 7089138  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| | |||||| | ||| |||||||    
T  7089137 gtcgagagttgaacctttgagtagcattaagacttaatga 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44102668 - 44102451
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||| ||||||| | ||     
T  44102668 cttagatgcttttgagtgcctgagcatgtttaataatgattatgaag-aatgtaggatgagattgaacctggatagattttagaataaaacttt-gagaa 44102571  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||| |   ||||| | | |  ||||||||||||||||| ||| |||| |||     
T  44102570 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagtc 44102471  T
Q  201 gctaagagttgaaccttggg 220  Q
    | | ||||||||||||||||    
T  44102470 gttgagagttgaaccttggg 44102451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14052975 - 14053186
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||           | |||||| ||||||    
T  14052975 cttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaa-----------ttaaacttgtgggat 14053063  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||| |||  |||||||||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  14053064 tctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 14053162  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  14053163 gtcgagagttgaacccttgggtag 14053186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17047746 - 17047956
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||  ||||||| ||||||||||||            | ||||||||||| ||||||    
T  17047746 cttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac------------tggaatgaaacttgtgggat 17047833  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||||||| | || ||||||| || ||| |||| ||||    
T  17047834 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtga-gactttgcgacctttgttgcacgagtt 17047932  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  17047933 gttgagagttgaacctttgggtag 17047956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16239654 - 16239876
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg-aaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttggga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  16239654 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaaga-tttagaatgaaacttgt-gga 16239751  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||| ||||||||||||                      |||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  16239752 ttctaacctgaactcgc----------------------ctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagt 16239829  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||| ||||||||| | | ||| |||||||||||||    
T  16239830 tgttgagagttgaactttggggtagtattaagacttaatgatgatgt 16239876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 7894077 - 7893938
Alignment:
Q  84 aatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| | ||||||||| ||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T
Q  184 tctatgtcgcacaagttgctaagagttgaaccttggggta 223  Q
     || ||| |||  ||||||  |||||||||||||||||||    
T  7893977 cctttgttgcatgagttgccgagagttgaaccttggggta 7893938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6190892 - 6190783
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  6190892 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 6190793  T
Q  101 tctgacctga 110  Q
    | ||||||||    
T  6190792 tttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16597104 - 16596971
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| ||| | ||     
T  16597104 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaaga-cttagaatgaaaatttagagaa 16597006  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctc 136  Q
    ||||||| ||||||||||  ||||| ||||| ||||    
T  16597005 tctgacc-gaactcgccatggcgagtagaggttctc 16596971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8846834 - 8846689
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||| |||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||  ||||| ||     
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgag 8846735  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   |||| |||||||||  ||||| |||||||||| |||||||||    
T  8846734 ttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15552272 - 15552129
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||  ||||||| ||| ||| | ||     
T  15552272 cttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaaga-cttagaatcaaaatttggagaa 15552174  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||| |||||||||||||| | |||||||||    
T  15552173 tctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24029200 - 24029057
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||  ||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  24029200 cttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 24029102  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  24029101 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 15464592 - 15464825
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||| || | |||| |||||||||||||| ||   ||| |||||| |  |||||||  |    
T  15464592 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggat-ttttgggtgt 15464690  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagtt 200  Q
       |||||||||| ||| |||||| |||||||||| ||||||||||  |||||  ||||| || |||||| |||||||||| |||| |||||||||||||    
T  15464691 tacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagtt 15464790  T
Q  201 gctaagagttgaaccttggggtagcactgagaatt 235  Q
    | || |||||||||||||| |||| | ||||||||    
T  15464791 gttatgagttgaaccttggagtagtaatgagaatt 15464825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 52242856 - 52243077
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| ||| |||||||||||||||| |||||||||| ||||| || | ||||||||||||||||||||||   ||| |||||| |  | |||||| |    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcat-tgttgggagt 52242954  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       |||||||||||||| |||||| |||||||||| ||||||||||  |||||  ||||| ||| |  ||||||||||||||||| |||||||| ||| |    
T  52242955 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 52243054  T
Q  202 ctaagagttgaaccttggggtag 224  Q
      ||||||||||| |||||||||    
T  52243055 taaagagttgaactttggggtag 52243077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13812471 - 13812614
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  13812471 cttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 13812569  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| || |||||||||  |||||||||||||||| |||||||||    
T  13812570 tctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20156952 - 20157095
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||   |||||||||||||||   ||     
T  20156952 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaag-gcttagaatgaaactttgaagaa 20157050  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    | ||| ||||||||||||  ||| |||||||||||| |||||||||    
T  20157051 tatga-ctgaactcgccatggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12774457 - 12774313
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||| || || || |||||||||||||||||||| |||  ||||||||||  ||||| ||     
T  12774457 cttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgttagaatgaa--ttttgtga- 12774361  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  12774360 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 22633876 - 22634018
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||||  |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |  | |    
T  22633876 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggataat 22633974  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    | ||  |||||||||||  |||||||||||||||| |||||||||    
T  22633975 caga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21815294 - 21815511
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||  ||| |||||||| | ||||||||| |  | || |||||| ||||||| |||     
T  21815294 cttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctgg-attaattaagaatg-aactttttggaa 21815391  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||  ||||| |||||||||| ||||||||||  ||||   |||||  |||||| |||||||||||||||||   |||||| |||    
T  21815392 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatcttcatcgcacgagt 21815490  T
Q  200 tgctaagagttgaaccttggg 220  Q
     | | ||||||||||||||||    
T  21815491 cgttgagagttgaaccttggg 21815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21814965 - 21815109
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| | ||||||||| |  | || |||||| ||||||| |||     
T  21814965 cttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctgg-attaattaagaatg-aactttttggaa 21815062  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||||| |||||||||||  ||||| |||||||||| ||||||||||    
T  21815063 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21818387 - 21818531
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| | ||||||||| |  | || |||||| ||||||| |||     
T  21818387 cttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctgg-attaattaagaatg-aactttttggaa 21818484  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||||| |||||||||||  ||||| |||||||||| ||||||||||    
T  21818485 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 23374125 - 23374259
Alignment:
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||| | || ||| |||| ||||| |     
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgtta-gattttgcaacctttgttgcacgagttgttg 23374223  T
Q  205 agagttgaaccttggggtagcactgagaattaatga 240  Q
    ||  || |||||| |||||||| | ||| |||||||    
T  23374224 aggattaaacctttgggtagcattaagacttaatga 23374259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15099809 - 15099665
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||||| ||| | || ||||||||||| || |||||| |||||||||||||||||   ||| |||||| || ||||| ||     
T  15099809 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatg-aatttttgtgag 15099711  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   ||||||||||||||  ||||| |||||||||| |||||||||    
T  15099710 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39705950 - 39706023
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || ||| | |||||||||||||||    
T  39705950 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaa 39706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43198250 - 43198323
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| || | |||| ||||||||||| |||||    
T  43198250 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaa 43198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 3332287 - 3332201
Alignment:
Q  58 tgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||||||||||||||||| || ||||||||||||| | || |||||| |||||||||||  |||||||||||||||| |||||||||    
T  3332287 tgagattgaacctggaaagactt-agaatgaaactttggagaatctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 17046765 - 17046721
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 17046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15868297 - 15868368
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||| |  | |||| |||||||||||||||    
T  15868297 cttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15190776 - 15190703
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||| |||||||| || |  | |||| ||||||| |||||||||    
T  15190776 cttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaa 15190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 14685593 - 14685534
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| || |||||||||||    
T  14685593 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggataagattgaacct 14685534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 13436 - 13506
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| ||||||||||||||||| || |||||||||||||| | |  | |||| |||||||||||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 13506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 14679389 - 14679325
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||| |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14679389 atgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 23838855 - 23838796
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  23838855 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 6190782 - 6190697
Alignment:
Q  140 tcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagca 226  Q
    |||||||||||||| ||| |||||| ||||||| |||||||||| || ||| |||| || ||   ||||||||||||||| ||||||    
T  6190782 tcgcgagtgacccaaaaatagagtgacttgtta-gattttgcgacctttgttgcacgagctgtcgagagttgaaccttggcgtagca 6190697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13844998 - 13844956
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||    
T  13844998 cttagatgtttttgagtgtctgaacatgtctaattatgattag 13844956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 32306582 - 32306624
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattagg 32306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32851910 - 32851868
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  32851910 cttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40471902 - 40471837
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || |||||||||||    
T  40471902 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 53081760 - 53081833
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaa 75  Q
    ||||||| || ||||||||| ||||||| |||||||||||| | | |  | |||| ||||||||||||||||||    
T  53081760 ttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaaa 53081833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 16956334 - 16956378
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  16956334 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 16956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 40478575 - 40478511
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  40478575 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 6759716 - 6759471
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| |     
T  6759716 cttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaaa 6759617  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  6759616 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttgcaatctgtgtcgcacaagtt 6759517  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||    
T  6759516 gctaagagttgaaccttggggtagtattgagacttaatgatgatgt 6759471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16092003 - 16092247
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| | ||  |||||||||| ||    
T  16092003 cttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagatttaaaaaa-aaacttttggaat 16092101  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  16092102 tctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagtt 16092201  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||||||||  | ||||| |||| ||||||||    
T  16092202 gttaagagttgaaccttggggtaatattgagacttaaggatgatgt 16092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18878899 - 18879143
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  18878899 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 18878998  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  || ||| |||| ||||    
T  18878999 tctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcggcctttgttgcacgagtt 18879097  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| |||||   ||| |||||||||||||    
T  18879098 gtcgagagttgaaccttgggatagcatcaagacttaatgatgatgt 18879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22875524 - 22875280
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||| | || ||||||| |||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| ||||     
T  22875524 cttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaacttt-gggaa 22875426  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  22875425 tctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaagtt 22875326  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||||||||| | |||||  ||||| ||||||    
T  22875325 gttaagagttgaaccttggggtagtattgagatgtaatggtgatgt 22875280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 28648706 - 28648950
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||| |||||||||| ||| | ||    
T  28648706 cttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagattt-agaatgaaaccttttgaat 28648804  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||||||||||||| |||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  28648805 tttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 28648904  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||||| |||||||||||||    
T  28648905 gttgagagttgaaccttggggtagtattgagacttaatgatgatgt 28648950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20536667 - 20536423
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  20536667 cttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatgggat 20536568  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||| || ||| |||| ||||    
T  20536567 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattagg-ttttgcgacctttgttgcacgagtt 20536469  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   || ||||||||||||||||| | | ||| ||||||| |||||    
T  20536468 gtcgagtgttgaaccttggggtagtattaagacttaatgaggatgt 20536423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 23406840 - 23406622
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||    
T  23406840 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtgggat 23406741  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || || ||| |||| ||||    
T  23406740 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgtgacctttgttgcacgagtt 23406642  T
Q  201 gctaagagttgaaccttggg 220  Q
      | |||||||||| |||||    
T  23406641 attgagagttgaactttggg 23406622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 41598643 - 41598421
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  41598643 cttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttgggaa 41598545  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||| ||  ||||| ||| |  ||||||||||||||||| || ||||| |||     
T  41598544 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaatgcttgtttaggattttgcgatctttgccgcacgagtc 41598445  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||||||||||    
T  41598444 gttgagagttgaaccttggggtag 41598421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18818072 - 18818315
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||||| || |    
T  18818072 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtaaaatgaaactttt-ggtt 18818170  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  18818171 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagtt 18818269  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||  || |||||| | | ||| ||||||| |||||    
T  18818270 gttgagagttgaaatttagggtagtattaagacttaatgaggatgt 18818315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22627194 - 22626950
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||| |||| || |     
T  22627194 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattgtagaatgaaccttt-ggaaa 22627096  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||| ||||| ||||| |||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  22627095 tctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 22626996  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||||| ||||||| |||||    
T  22626995 gttgagagttgaaccttggggtagtattgagacttaatgaggatgt 22626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21923590 - 21923834
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||    
T  21923590 cttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaaga-tttagaatgaaactttttggat 21923688  T
Q  101 tctga-cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||| || | |||    
T  21923689 tctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcccgagt 21923787  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | | |||||||||||||| ||||| | | ||| |||||||||||||    
T  21923788 agttgagagttgaaccttgaggtagtattaagacttaatgatgatgt 21923834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23649012 - 23648768
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttggga 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| || |||||||||| |||||| |    
T  23649012 cttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagactt-agaatgaaacattttggaa 23648914  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||| ||||||||||  |||| ||||||||||| ||||| |||| |||||||||||||||| ||||||||| || ||||| || ||| |||| |||    
T  23648913 ttctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgcacgagt 23648815  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | | |||  ||||||||||||    
T  23648814 tgttgagagttgaaccttggggtagtattaagacctaatgatgatgt 23648768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21918672 - 21918843
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||||| | |||||||||||||||||          |||||||| ||||||    
T  21918672 cttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaa----------tgaaacttgtgggat 21918761  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  21918762 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcga 21918843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 25362813 - 25363024
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  25362813 cttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 25362901  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||| ||||||||| ||||||||||||||||| | || ||||||| || | | |||| ||||    
T  25362902 tctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtga-gactttgcgacctttcttgcacgagtt 25363000  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  25363001 gttgagagttgaacctttgggtag 25363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 7373208 - 7373084
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||||| ||  ||    
T  7373208 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaaat 7373109  T
Q  101 tctgacctgaactcgccacagcgag 125  Q
    ||||||||||||||||||| |||||    
T  7373108 tctgacctgaactcgccacggcgag 7373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 5865939 - 5866082
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  5865939 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaa 5866037  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||    
T  5866038 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 31971703 - 31971492
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||           | |||||| || |||    
T  31971703 cttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaa-----------ttaaacttgtgagat 31971615  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||| |||||||||| |||||| ||||||| |||||||||| || ||| |||| ||||    
T  31971614 tctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgtta-gattttgcgacctttgttgcacgagtt 31971516  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   |||| |||||||| ||||||    
T  31971515 gtcgagagctgaacctttgggtag 31971492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 16199324 - 16199530
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctg 104  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||           ||||| ||||| | |||||||||    
T  16199324 gatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct-----------agaattaaactgt-gggattctg 16199411  T
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||| ||| || ||||||||||| || ||| |||| |||||       
T  16199412 acctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttatt-ggattttgcgacctttgttgcacgagttgtcg 16199510  T
Q  205 agagttgaaccttggggtag 224  Q
    ||||||||||| | ||||||    
T  16199511 agagttgaacccttgggtag 16199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17141372 - 17141229
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  17141372 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaa 17141274  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    || |||| ||||||||||  |||||||||||||||| |||||||||    
T  17141273 tcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21249840 - 21249697
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||  || |||||||| ||| | ||     
T  21249840 cttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaaga-cttggaatgaaaatttggagaa 21249742  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||    
T  21249741 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21255678 - 21255535
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||  || |||||||| ||| | ||     
T  21255678 cttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaga-cttggaatgaaaatttggagaa 21255580  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||| ||||||| |||||||||    
T  21255579 tctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21491451 - 21491308
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||| | ||     
T  21491451 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaaga-cttagaatgaaaatttagagaa 21491353  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||||  |||| ||||  ||||| |||||||||  |||||||||    
T  21491352 tctgacc-aaacttgccatggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 21674155 - 21674076
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaa 89  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  21674155 ttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaa 21674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45130693 - 45130766
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  45130693 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26355360 - 26355504
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||  || || ||| |||||||||||||||||||| ||||||||| || ||||| ||     
T  26355360 cttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatg-aatttttgtgaa 26355458  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   ||||||||| ||||  ||||| |||||||||| |||| ||||    
T  26355459 ttgtacctgaacttgccatggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39834291 - 39834147
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||| ||| ||| | |||||||||||||| || |||||| |||||||||||||||||   ||| |||||||| | |||| ||     
T  39834291 cttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatc-tttgtgag 39834193  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   ||||||||||||||  ||||| |||||||||| |||||||||    
T  39834192 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19801089 - 19801234
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| || |  ||||| |||||||||||||||   ||| |||| | ||||| |||||     
T  19801089 cttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaatagtttaagaacg-aacttgtgggag 19801187  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |   ||||||||||||||  ||||| |||||  ||| ||||||||||    
T  19801188 ttatacctgaactcgccatggcgagtagaggtcctcgcctcgcgagt 19801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38854913 - 38854986
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || ||| | ||||| |||||||||    
T  38854913 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaa 38854986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 7373088 - 7372985
Alignment:
Q  142 gcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    ||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||| | |||||||||| ||||||| | | ||||| |||||||     
T  7373088 gcgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtggtagtgagacttaatgag 7372990  T
Q  242 gatgt 246  Q
    |||||    
T  7372989 gatgt 7372985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 20499118 - 20499049
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | |  | |||| ||||||||||||||    
T  20499118 ttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 23760511 - 23760575
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||||||  | || | | |||||||||||||||||    
T  23760511 ttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaa 23760575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21414889 - 21414956
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    |||||||| ||||||||||||||| |||   | ||||||||||||| || ||||||||||||||||||    
T  21414889 cttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6520827 - 6520757
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||| || || ||| | ||| ||||||||    
T  6520827 cttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctg 6520757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 37116882 - 37116813
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| | |  | |||| ||||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 37116813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 17266579 - 17266647
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| | |  | |||| |||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 20527871 - 20527812
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  20527871 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 45130797 - 45130859
Alignment:
Q  138 cctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||| || ||| |||| |||||    
T  45130797 cctcgcgagtgacccagaaacagagtgacttatta-gattttgcgacctttgttgcacgagttg 45130859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13507671 - 13507713
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  13507671 cttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13597203 - 13597245
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  13597203 cttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 16800024 - 16799958
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||    
T  16800024 ttagatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaac 16799958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 17085770 - 17085804
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||||||||||||||| ||||||||||||||    
T  17085770 ttttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 22963249 - 22963303
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||||||||||||||| |||||||| || || || ||||||| |||||||||||    
T  22963249 ttaggattttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 22963303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 24353550 - 24353488
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||||||||||| |||| |||||||||||||| | |  | |||| |||||||||||||||    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 24353488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 982989 - 983058
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    ||||||| ||||||||| |||||||||| || || |||||||||| |  | |||| ||||||||||||||    
T  982989 ttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctg 983058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 16882850 - 16882914
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||| ||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  16882850 gatgccttagagtgtctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 16882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||| |||||| |||||||||| |||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 40492438 - 40492506
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| | |  | |||| |||||||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

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Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14973313 - 14973069
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||| ||| ||||||| ||    
T  14973313 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaa-cttttggaat 14973215  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  14973214 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 14973115  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||    
T  14973114 gctaagagttgaaccttggggtagtattgagacttaatgatgatgt 14973069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 40213384 - 40213627
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||||| |    
T  40213384 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttgggaat 40213482  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    || ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||    
T  40213483 ctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 40213582  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | |||||| ||||||||||||| | ||||| |||||||||||||    
T  40213583 ttgagagtttaaccttggggtagtattgagacttaatgatgatgt 40213627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18438993 - 18438749
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||    
T  18438993 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagattt-agaatgaaacttttggaat 18438895  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  18438894 tctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 18438795  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | || ||||||||||||||||| | ||||| |||||||||||||    
T  18438794 gttgagtgttgaaccttggggtagtattgagacttaatgatgatgt 18438749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25476047 - 25476291
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  25476047 cttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttggaat 25476146  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     ||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  25476147 -ctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 25476245  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||| ||||| | ||||| ||||||| |||||    
T  25476246 gttgagagttgaaccttgaggtagtattgagacttaatgaggatgt 25476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17488316 - 17488071
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| | ||||    
T  17488316 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtaggat 17488217  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |||| |||    
T  17488216 tctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgtta-gattttgcgacctttgttgcacgagt 17488118  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  17488117 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 17488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 11424425 - 11424669
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| | |     
T  11424425 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagattt-agaatgaaactttttgaac 11424523  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||| |||| |||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  11424524 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 11424623  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||| ||||||||| | ||||| |||||| ||||||    
T  11424624 gttgagagttgaactttggggtagtattgagacttaatgttgatgt 11424669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 13442725 - 13442489
Alignment:
Q  9 cttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacct 108  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  109 gaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagag 208  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| |||||   ||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagag 13442527  T
Q  209 ttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||||||| |  || | ||| |||||||||||||    
T  13442526 ttgaaccttgggatgacattaagacttaatgatgatgt 13442489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14573047 - 14572803
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| ||||| |     
T  14573047 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagactt-agaatgaaacctttggaaa 14572949  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  ||||| |||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||| || ||| |||| ||||    
T  14572948 tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagtt 14572849  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  14572848 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 14572803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 26687346 - 26687102
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  26687346 cttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 26687247  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| || ||| |||| | |     
T  26687246 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttacgacctttgttgcacgaatc 26687148  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||| ||||||||| | || || ||||||| |||||    
T  26687147 gttgagagttgaactttggggtagtattgggacttaatgaggatgt 26687102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14576495 - 14576739
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||| || |||||||||| ||||| |     
T  14576495 cttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagactt-agaatgaaacctttggaaa 14576593  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| || ||| |||| ||||    
T  14576594 tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagtt 14576693  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  14576694 gttgagagttgaaccttggggtagtattaagatttaatgatgatgt 14576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17247948 - 17248168
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  17247948 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttgggaa 17248046  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||  ||||| ||| |  |||| |||||||||||| |||||||| |||     
T  17248047 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttagaattttgcgatctttgtcgcacgagtc 17248146  T
Q  201 gctaagagttgaaccttggggt 222  Q
    | | |||||| |||||||||||    
T  17248147 gttgagagttaaaccttggggt 17248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17499798 - 17499553
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| | ||||    
T  17499798 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgttggat 17499699  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||| ||||||| | |||||||||||||| |||| | ||||||| || |||||||||||||||||| |||||||||| || ||| |||| |||    
T  17499698 tctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgtta-gattttgcgacctttgttgcacgagt 17499600  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  17499599 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 17499553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20698109 - 20698342
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  20698109 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 20698197  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  20698198 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgtggcacgagtt 20698296  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   ||||||||||||| || ||| | | ||| |||||||||||||    
T  20698297 gtcgagagttgaacctttggatagaattaagacttaatgatgatgt 20698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23083023 - 23083267
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||| | |||||||||| |||||||||   ||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  23083023 cttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaaga-tttagaatgaaactttttggat 23083121  T
Q  101 tctga-cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||| ||| |||||||||  ||||| |||||||||| |||||||| ||||||||||||| |||| ||||||||| |||||||| || ||| |||| |||    
T  23083122 tctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgttagg-ttttgcgacctttgttgcacgagt 23083220  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||| ||||| | | ||| ||| |||||||||    
T  23083221 tgttcagagttgaaccttgaggtagtattaagacttagtgatgatgt 23083267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 53070361 - 53070582
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |  | || |||||| ||||||| |||     
T  53070361 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attaattaagaatg-aactttttggaa 53070458  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||  ||||| |||||||||| ||||||||||  ||||   |||||  |||||| ||||||||||||||||| |||||||| |||    
T  53070459 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatctttgtcgcacgagt 53070557  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  53070558 cgttgagagttgaaccttggggtag 53070582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 43841330 - 43841169
Alignment:
Q  62 attgaacctggaaagattttagaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacaga 161  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  43841330 attgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacaga 43841231  T
Q  162 gtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||| ||||||||| |||||||| || |||  ||| ||||| | ||||||  || |||||||||    
T  43841230 gtgtcttgttagg-ttttgcgacctttgttacacgagttgttgagagtttgactttggggtag 43841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12340211 - 12340068
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  12340211 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 12340113  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||| | ||||||||||||  |||||||||||||||| |||||||||    
T  12340112 tct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12933972 - 12934117
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||| ||||| ||     
T  12933972 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa-ttttgtga- 12934069  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||| ||||| ||||||||||    
T  12934070 actgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 14669208 - 14669076
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaa 111  Q
    |||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | || ||||| |||||    
T  14669208 ttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaa 14669111  T
Q  112 ctcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||||  ||||||||||||||||||||||||||    
T  14669110 ctcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9513369 - 9513228
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||| |||||||||||||||||| ||||| ||     
T  9513369 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaa 9513270  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
        |||||||||| |||  |||||||||||||||| |||||    
T  9513269 ctaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9521344 - 9521203
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||| |||||||||||||||||| ||||| ||     
T  9521344 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaa 9521245  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
        |||||||||| |||  |||||||||||||||| |||||    
T  9521244 ctaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32308127 - 32307983
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||||||||| | |||| |||||||||||  ||||||||     
T  32308127 cttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttggga- 32308031  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  32308030 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 12852027 - 12852169
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||||  |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||||  |||||||||||||||||  | |    
T  12852027 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaaga-cttagaatgaaacttttgataat 12852125  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||| ||||||||||||  |||||||||||||||  |||||||||    
T  12852126 ctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 49667746 - 49667890
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||| | ||| ||     
T  49667746 cttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa-tattgtga- 49667842  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  49667843 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 14666053 - 14665921
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaa 111  Q
    ||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | || ||||| |||||    
T  14666053 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaa 14665956  T
Q  112 ctcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| |  |||||||||||||||| |||||||||    
T  14665955 ctcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 14735566 - 14735434
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaa 111  Q
    ||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | || ||||| |||||    
T  14735566 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaa 14735469  T
Q  112 ctcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| |  |||||||||||||||| |||||||||    
T  14735468 ctcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14179781 - 14179693
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaa 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||    
T  14179781 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaaga-cttagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30030287 - 30030054
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaact-tttggga 99  Q
    ||||||||| |||||||| ||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||           ||||||  ||||| |    
T  30030287 cttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctggaa-----------tgaaacagtttggaa 30030199  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtga-cccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
    ||||||||| |||||||||  |||||||||||||||| |||||||||| | ||||| |||||| |||||||||| |||||||||| || ||| |||| ||    
T  30030198 ttctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccag-aacagaatgccttgtta-gattttgcgacctttgttgcacgag 30030102  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||   ||||||||||||| |||||||  | ||| |||||||||||||    
T  30030101 ttgtcgagagttgaacctttgggtagctttaagacttaatgatgatgt 30030054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49389306 - 49389446
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||  ||||| ||     
T  49389306 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtga- 49389402  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgc 143  Q
     ||| ||||||||||||||  ||||||||||| |||| ||||||    
T  49389403 actgaacctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13209990 - 13210133
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatg-aaacttttggga 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||  |||||||| ||||| ||| ||    
T  13209990 cttagatgcttttgagtgcctaaacatgtctaata-tgattaggaaagaaagtagaatgagattgaacctggaaaga-cttagaatgaaaactcttgaga 13210087  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     | ||||| ||||||||||  ||||| |||||||||| |||||||||    
T  13210088 atgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 12399654 - 12399506
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||| | |||||||||           ||||||||||| || | |    
T  12399654 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctg-----------gaatgaaacttgtgaggt 12399566  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacag 160  Q
    ||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||    
T  12399565 tctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaacag 12399506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16097789 - 16097645
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| ||||||||| |||||||||||||||||| |||||||| || || |||||||||||||||||| ||||||||||||||| || ||||| ||     
T  16097789 cttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatg-aatttttgtgaa 16097691  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |  |||||||||||||||  | ||| |||||||||| |||||||||    
T  16097690 ttggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 42386858 - 42386648
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaac 112  Q
    ||||||| ||||||||  |||||||||||||| | || | |||| || ||||||||||| ||| | || |||||||||||||||||| |   ||||||||    
T  42386858 tgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctg-aaatagttaagaatgaaacttttgggagttatacctgaac 42386760  T
Q  113 tcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgctaagagttg 211  Q
    ||||||  ||||| |||||||||||||||||||||  ||||   |||||  |||||| |||||||||||||| || |||||||| ||||| |  ||||||    
T  42386759 tcgccatggcgagtagaggctctcacctcgcgagttgcccaattacaga-agccttgtttaggattttgcgaactttgtcgcacgagttgttgtgagttg 42386661  T
Q  212 aaccttggggtag 224  Q
    |||||||||||||    
T  42386660 aaccttggggtag 42386648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4588477 - 4588590
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||| | ||     
T  4588477 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaaga-cttagaatgaaactttggagaa 4588575  T
Q  101 tctgacctgaactcgc 116  Q
    ||||| ||||||||||    
T  4588576 tctga-ctgaactcgc 4588590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 1644349 - 1644489
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctg 104  Q
    |||| |||||||||||||||||||||| |||||||||||||| || |  ||||||||||||||||||  |||| |||||||||||  ||||| ||  |||    
T  1644349 gatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactttagaatgaa--ttttgtga-actg 1644445  T
Q  105 -acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||||||||||||||  |||||||||||||||| ||||||||||    
T  1644446 aacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 324693 - 324549
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||| || ||||||||||||||||||   |||   ||| |||||| || |||||||| |    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatg-aatttttgggagt 324595  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
       |||||||||||||| |||||| |||||||||| ||||||||||    
T  324594 tgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 52523390 - 52523611
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||| || | |||  ||| |||||||||||||   ||| ||||||  | |||||||| |    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatg-gatttttgggagt 52523488  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       |||||||||||||| |||||| |||||| ||| |||  |||||  |||||  ||||| ||| |  ||||||||||||||||| |||||||| |||      
T  52523489 tacacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtca 52523588  T
Q  202 ctaagagttgaaccttggggtag 224  Q
     | |||||||||| |||||||||    
T  52523589 ttgagagttgaactttggggtag 52523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43842637 - 43842572
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattga 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  43842637 cttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16104239 - 16104151
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaa 89  Q
    |||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| |||||||||| |||| |||||| ||||    
T  16104239 cttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactttagattgaa 16104151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 2050863 - 2051073
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||| || | |||| ||||||||||||  |||   ||| ||||||  | ||||||||     
T  2050863 cttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc--gaatagtttaagaatg-gatttttgggag 2050959  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |   |||||||||| ||| |||||| |||||||||| ||||| ||||  |||||  ||| | ||| |  ||||||||||||||||| |||||||  ||||    
T  2050960 ttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgcttgtttaggattttgcgatctttgtcgcatgagtt 2051059  T
Q  201 gctaagagttgaac 214  Q
    | | ||||||||||    
T  2051060 gttgagagttgaac 2051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17247182 - 17247239
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaat 58  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  17247182 cttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 16796875 - 16796768
Alignment:
Q  132 ctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgag 231  Q
    ||||| ||||||||||||||| ||||||||||||||||| | || ||||||| || ||| |||| | ||| ||||||||||||||| |||||||| | ||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtga-gactttgcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaag 16796777  T
Q  232 aattaatga 240  Q
    | |||||||    
T  16796776 acttaatga 16796768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16809844 - 16809724
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| |||||||||||||| |||||||    ||||||||||||||| |||||||| |||||||||| |||||||           |||||||| ||||||    
T  16809844 cttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctggaa-----------tgaaacttgtgggat 16809760  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctc 136  Q
    ||||||||||||||||||  ||||||||| ||||||    
T  16809759 tctgacctgaactcgccatggcgagcagatgctctc 16809724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12171779 - 12171824
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 46  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  12171779 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaa 12171824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 1465071 - 1465240
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||||| ||| | || ||||||| ||| || |||||| |||||||||||||||||  |||| |||| | || || || ||     
T  1465071 cttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctggaataatttaagaacg-aatttgtgtgag 1465169  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   ||||||||| ||||  ||||| |||||||||| |||||||||  | ||||  ||||| |||||||||    
T  1465170 ttgcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 1465240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14234949 - 14234809
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||  |||||||||||||||||||| |||| ||||||||||| || | |||| ||||||||||||  |||| | || |||||| || ||||||||     
T  14234949 cttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacc-cgaaatagttaagaatg-aatttttgggag 14234852  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgc 143  Q
    |   ||||||||||||||  ||||| |||||| ||| ||||||    
T  14234851 ttgcacctgaactcgccatggcgagtagaggccctcgcctcgc 14234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15471383 - 15471310
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||| || || ||| | |||||||||||||||    
T  15471383 cttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaa 15471310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 22109938 - 22109980
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattagg 22109980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 43927638 - 43927597
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattag 43927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 839668 - 839609
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  839668 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12378455 - 12378384
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||||||| ||||||||||||||| ||||  ||||||||||||| | |  | |||| |||||||||||||||    
T  12378455 cttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctgg 12378384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14501658 - 14501615
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  14501658 cttagatgattttgagtgcctgaatatgtataataatgattagg 14501615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23275200 - 23275157
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  23275200 cttagatgattttgagtgcctgaatatgtataataatgattagg 23275157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 24188199 - 24188140
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  24188199 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 55149400 - 55149341
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  55149400 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 316654 - 316612
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 45797701 - 45797659
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattagg 45797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 37250932 - 37250973
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    ||||||||||||| |||||| |||||||||| ||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 37250973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 4291194 - 4291150
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  4291194 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 4291150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 15691955 - 15692019
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  15691955 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 17710275 - 17710319
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  17710275 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 17710319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 19725668 - 19725720
Alignment:
Q  94 ttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||| || ||||||||  ||||||||| |||||| |||||||||    
T  19725668 ttgggattctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 19725720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||| |||||| |||||||||| |||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23704446 - 23704510
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23704446 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23722902 - 23722966
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23722902 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23741358 - 23741422
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23741358 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 41092030 - 41092074
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  41092030 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 41092074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41201475 - 41201539
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  41201475 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 9078406 - 9078167
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctga 105  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||| | |||||||    
T  9078406 atgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagattt-agaatgaaaccttttgaattctga 9078308  T
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaa 205  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  9078307 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaa 9078208  T
Q  206 gagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | ||||||||||||||||| | ||||| |||||||||||||    
T  9078207 gggttgaaccttggggtagtattgagacttaatgatgatgt 9078167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21985809 - 21986053
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  21985809 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt-agaatgaaacttttggaat 21985907  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  21985908 tctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 21986007  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| || ||||||||||    
T  21986008 gttgagagttgaaccttggggtagtattcagacttgatgatgatgt 21986053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1096926 - 1096682
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||  |||||||| ||||||| |     
T  1096926 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaa-cttttggaaa 1096828  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||| |||||||||||||    
T  1096827 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagtt 1096728  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | ||| ||||| |||||||||||| | ||||| ||||||| |||||    
T  1096727 gttaaaagttggaccttggggtagtattgagacttaatgaggatgt 1096682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 24529680 - 24529435
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| ||    
T  24529680 cttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttggaat 24529581  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||| || ||| |||| |||     
T  24529580 tctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcactagta 24529481  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||| | |||||||||||||    
T  24529480 gttgagagttgaaccttggggtagtattgaaacttaatgatgatgt 24529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13095953 - 13095709
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||    
T  13095953 cttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattt-agaatgaaacttgtgggat 13095855  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||| |||     
T  13095854 tctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagtc 13095755  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  13095754 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 13095709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25421991 - 25421747
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||  ||| ||||||||| |||||||||||||| ||||||||||||| || |     
T  25421991 cttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagattt-agaatgaaactttcggaaa 25421893  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| |||||||||||| ||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| || ||| |||| ||||    
T  25421892 tctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagtt 25421793  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||||| ||||| |||||||||||||    
T  25421792 gttgagagttgaaccttggggtagcattgagacttaatgatgatgt 25421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25431853 - 25431609
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| |||| ||| ||||||||| |||||||||||||| |||||||||||||||| |     
T  25431853 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagattt-agaatgaaacttttggaaa 25431755  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || |||  ||| ||||    
T  25431754 tctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagtt 25431655  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||| ||||||| ||||| |||||||||||||    
T  25431654 gttgagagttgaaccttgaggtagcattgagacttaatgatgatgt 25431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13025769 - 13025525
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||    
T  13025769 cttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattt-agaatgaaacttgtgggat 13025671  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||| | ||    
T  13025670 tctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgattt 13025571  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  13025570 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 13025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 24494027 - 24493783
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  24494027 cttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt-agaatgaaactttttggat 24493929  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||||||||||| || ||||| |||| ||||| |||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  24493928 tctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 24493829  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| ||||| |||||||    
T  24493828 gttgagagttgaaccttggggtagtattaagacttaataatgatgt 24493783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23390158 - 23390402
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  23390158 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 23390257  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  ||||| ||||||| || |||| ||||||||||  |||||||||||||||||| ||||||| || || ||| |||| ||||    
T  23390258 tctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtta-gattttgtgacctttgttgcacgagtt 23390356  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| ||| | | ||| ||||||| |||||    
T  23390357 gtcgagagttgaaccttgggatagtattaagacttaatgaggatgt 23390402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 11580907 - 11581129
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||| ||     
T  11580907 cttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgagaa 11581005  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||   ||||| ||| |  ||||||||||||||||| ||||| || |||     
T  11581006 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgcttgtttaggattttgcgatctttgtcgtacgagtc 11581105  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||||||||||    
T  11581106 gttgagagttgaaccttggggtag 11581129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 36154490 - 36154712
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||| |||| ||     
T  36154490 cttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaataaaac-tttgagaa 36154588  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  ||||| |||||||||| |||||||||||||| |   ||||| ||| |  ||||||||||||||||| |||||||| |||     
T  36154589 tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtc 36154688  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||||||||||    
T  36154689 gttgagagttgaaccttggggtag 36154712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 8286515 - 8286748
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  8286515 cttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 8286603  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||| |||| ||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| ||   ||||    
T  8286604 tctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcttgagtt 8286702  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | | ||| ||||||| |||||    
T  8286703 gttgagagttgaacctttgggtagtattaagacttaatgaagatgt 8286748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21292643 - 21292831
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||           | |||||| ||| ||    
T  21292643 cttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggaat 21292731  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| ||| ||| |||||||||| || ||| |||| ||||    
T  21292732 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgacttttta-gattttgcgacctttgttgcacgagtt 21292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 22075467 - 22075240
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| | |||||||||||           |||||||| || | |    
T  22075467 cttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctggaa-----------tgaaacttgtgaggt 22075379  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||  |||||||| || ||| |||| |||    
T  22075378 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgttag--ttttgcgacctttgttgcacgagt 22075281  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    || | ||  || |||||| |||||||| | ||| |||||||    
T  22075280 tgttgaggattaaacctttgggtagcattaagacttaatga 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22119855 - 22119998
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  22119855 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 22119953  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  22119954 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 22144508 - 22144292
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||| || | |||| |||||||||||||||||  |||| |||||| |  |||||||| |    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggat-ttttgggagt 22144410  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       |||||||||||||| |||||| |||||||||| ||||||||||  |||||  ||||| ||| |  ||||||||||||||||| |||||||| |||||    
T  22144409 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttg 22144310  T
Q  202 ctaagagttgaaccttgg 219  Q
     | |||||||||||||||    
T  22144309 ttgagagttgaaccttgg 22144292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19660499 - 19660643
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatg-aaacttttggga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||  |||||||| ||||||| | ||    
T  19660499 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaaga-cttagaatgaaaactttggaga 19660597  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||| ||||||||||  |||||||||||||||| |||||||||    
T  19660598 atctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21566003 - 21565863
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| || ||| | ||     
T  21566003 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aattttcgtgaa 21565905  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
    |   ||||||||||||||  |||||||||||||||| |||||    
T  21565904 ttgtacctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 22107047 - 22107204
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||           | |||||| |||||||    
T  22107047 ttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaa-----------ttaaacttgtgggatt 22107135  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgt 170  Q
    ||||||||||||| |||  |||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  22107136 ctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgt 22107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 21871233 - 21871365
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| || ||||| ||||||||||||||||||||||| | |||||  ||||||| |||    
T  21871233 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtgat 21871331  T
Q  101 tctgacctgaactcgccacagcgagcagaggctc 134  Q
    ||||||||| ||||||||  ||||| ||||||||    
T  21871332 tctgacctgtactcgccatggcgagtagaggctc 21871365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 21875513 - 21875645
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| || ||||| ||||||||||||||||||||||| | |||||  ||||||| |||    
T  21875513 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtgat 21875611  T
Q  101 tctgacctgaactcgccacagcgagcagaggctc 134  Q
    ||||||||| ||||||||  ||||| ||||||||    
T  21875612 tctgacctgtactcgccatggcgagtagaggctc 21875645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24766999 - 24767142
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||| |||||||||  ||||||||||||||| | ||     
T  24766999 cttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaaga-cttagaatgaaactttggagaa 24767097  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||| ||  |||||||||||||||| |||||||||    
T  24767098 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22959195 - 22959339
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| ||||||||| || ||||| ||     
T  22959195 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatg-aatttttgtga- 22959292  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||||||||||||||  ||||| |||||||||| |||||||||    
T  22959293 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19669359 - 19669219
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| || ||  |||||||||||||| |||||||| |||||||||||  ||||| ||     
T  19669359 cttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtgaa 19669260  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctc 141  Q
    |   ||||||||||||||  ||| | |||||||||| ||||    
T  19669259 ttgtacctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21329157 - 21329326
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||| | |||||||| || || | |||| |||||||||||||||||  ||||  ||||| || ||||||||     
T  21329157 cttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatg-aatttttgggag 21329255  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   || ||||||||||| |||||| |||||||||| |||||||| | ||| ||  ||||| |||||||||    
T  21329256 ttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtt 21329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 5888837 - 5889006
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||||| ||| | || ||||||||||| || |||||| ||||||||||| |||||   ||| |||||||| | |||| ||     
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatc-tttgtgag 5888935  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   ||||||||||||||  ||||| |||||||||| |||||||||  |||||   ||||| |||||||||    
T  5888936 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtt 5889006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 21498683 - 21498752
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||| |||||||||||||||||||| ||||||| |||||||  || |||||| |||||||||||||||||    
T  21498683 gatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaa 21498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 20026526 - 20026568
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  20026526 ttagatgattttgagtgcctgaacatgtataataatgattagg 20026568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccag 154  Q
    |||||||||||||| |||||| |||||||||| |||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  107 ctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41294112 - 41294176
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||| ||| || |||||||||| |||||||| || ||||||||||    
T  41294112 gatgccttagagtgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 21294947 - 21295006
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  21294947 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 15441638 - 15441696
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  15441638 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 15441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26732421 - 26732463
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26740234 - 26740276
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26740276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21741205 - 21741278
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||  |||||||||||||||| ||| | || |||| |||||| || | |||| |||||||||||||||||    
T  21741205 cttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctggaa 21741278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 22177807 - 22177848
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||| ||||||||||||||| |||| ||||||||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattagg 22177848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 22588516 - 22588459
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || |||||||||    
T  22588516 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23336973 - 23337030
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 23337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25574056 - 25574097
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25574056 ttagatggttttgagtgcctgaacatgtataagaatgattag 25574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25575249 - 25575290
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25575249 ttagatggttttgagtgcctgaacatgtataagaatgattag 25575290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25576442 - 25576483
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25576442 ttagatggttttgagtgcctgaacatgtataagaatgattag 25576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 26011697 - 26011841
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| || |||||| || ||||||| |||||||||||| ||| || | || | |||||||||||||||||   ||| ||||||  | |||||||| |    
T  26011697 ttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctggaatagtttaagaatg-gatttttgggagt 26011795  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
       ||||||||||||||  ||||| ||||||  || ||||||||||    
T  26011796 tacacctgaactcgccatggcgagtagaggccttcgcctcgcgagt 26011841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 17284494 - 17284430
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  17284494 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 19992305 - 19992261
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  19992305 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 19992261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 22334501 - 22334545
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  22334501 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 22334545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38227939 - 38227695
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  38227939 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt-agaatgaaactttttggat 38227841  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| || ||| |||| ||||    
T  38227840 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagtt 38227741  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||||||||| | | ||| |||||||||||||    
T  38227740 gttaagagttgaaccttggggtagtattaagacttaatgatgatgt 38227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 3564026 - 3564270
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| |     
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 3564124  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  3564125 tctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 3564224  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||| ||||||||||||| | ||||| |||||||||||||    
T  3564225 gttaagagtttaaccttggggtagtattgagacttaatgatgatgt 3564270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 15143699 - 15143943
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  15143699 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaa-cttttgtgat 15143797  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  15143798 tctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 15143897  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||    
T  15143898 gctaagagttgaacctcggggtagtactaagacttaatgatgatgt 15143943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9509648 - 9509404
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  9509648 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 9509549  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||  ||||    
T  9509548 tctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcaagagtt 9509450  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| ||||| | ||| ||||||| |||||    
T  9509449 gtcgagagttgaaccttgggatagcattaagacttaatgaggatgt 9509404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12699291 - 12699047
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| | ||||||||||  ||||||    
T  12699291 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgttgaatgaaactcgtgggat 12699192  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||| |||||||| || ||| |||| ||||    
T  12699191 tctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgttagg-ttttgcgacctttgttgcacgagtt 12699093  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   | |||||||||||||||||| | | ||| ||||||| |||||    
T  12699092 gtcgatagttgaaccttggggtagtattaagagttaatgaggatgt 12699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17061622 - 17061844
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||| ||     
T  17061622 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgagaa 17061720  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||| |  ||||| |||||||||| |||||||||||||| |   ||||| ||| |  ||||||||||||||||| |||||||| |||     
T  17061721 tctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtc 17061820  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||| ||||||||    
T  17061821 gttgagagttgaaccatggggtag 17061844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 16385920 - 16386147
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           | |||||| ||||||    
T  16385920 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 16386008  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||| ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||  ||||    
T  16386009 tctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcatgagtt 16386107  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| ||||| || | ||| |||||||    
T  16386108 gtccagagttgaacctttgggtaacattaagacttaatga 16386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 44116963 - 44116742
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||||     
T  44116963 cttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaaga-tttagaatgaaac-tttgggaa 44116866  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| |||  |||||  ||    ||||||||||||||||| | | |||| |||     
T  44116865 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgactcagttacagaacgctagtttaggattttgcgatctttattgcacgagtc 44116766  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | || |||||||||||||||||    
T  44116765 gttgagggttgaaccttggggtag 44116742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 40443836 - 40443649
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||     |||       |||| ||||||    
T  40443836 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaa-----tta-------acttgtgggat 40443749  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||| || ||| |||| ||||    
T  40443748 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttatt-ggattttgcgacctttgttgcacgagtt 40443650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27847506 - 27847717
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||           | |||||| ||||||    
T  27847506 cttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaa-----------ttaaacttatgggat 27847594  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  27847595 tttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 27847693  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  27847694 gtcgagagttgaacccttgggtag 27847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 12756379 - 12756600
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |  |||| |||||| ||||||| |||     
T  12756379 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attatttaagaatg-aactttttggaa 12756476  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||| |||  ||||| |||||||||| ||||||||||  ||||   ||| |  |||||| ||||||||||||||||| |||||||| |||    
T  12756477 gctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca-aaagccttgtttaggattttgcgatctttgtcgcacgagt 12756575  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  12756576 cgttgagagttgaaccttggggtag 12756600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28504963 - 28505106
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  28504963 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaa 28505061  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||    
T  28505062 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 12255454 - 12255675
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||| || | |||| |||||||||||||||||   ||| ||||||||  |||||||| |    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaat-ttttgggagt 12255552  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       |||||||||||||| |||||| |||||||||| ||||||||||  |||||  ||||| ||| |  ||||||||||||||||| |||| ||| |||||    
T  12255553 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttg 12255652  T
Q  202 ctaagagttgaaccttggggtag 224  Q
     | |||||||||  |||||||||    
T  12255653 ttgagagttgaattttggggtag 12255675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15754549 - 15754689
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatg-aaacttttggga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |  |||||||| ||||||||| ||    
T  15754549 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaa-aacttagaatgaaaacttttgaga 15754647  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
     ||||||| ||||| ||||| ||||||| |||||||| |||||    
T  15754648 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39267308 - 39267447
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  39267308 cttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 39267406  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
    ||||| ||||||||||||  |||||||||||||||| |||||    
T  39267407 tctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26212444 - 26212217
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| | |||||||| ||||||||||||||||||           |||||||| || | |    
T  26212444 cttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 26212356  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||  |||||||  |||||||| || ||| |||| |||    
T  26212355 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgttag--ttttgcgacctttgttgcacgagt 26212258  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    || | ||  || |||||| |||||||| | ||| |||||||    
T  26212257 tgttgaggattaaacctttgggtagcattaagacttaatga 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9751212 - 9751355
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||  ||||||||||||||| | ||     
T  9751212 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaaga-cttagaatgaaactttggagaa 9751310  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    | ||| ||||||||||||  | |||||||||||||| |||||||||    
T  9751311 tttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18302637 - 18302494
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||  |||||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |  |     
T  18302637 cttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggataa 18302539  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  18302538 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 44014633 - 44014489
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| || |||||  |     
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgttag 44014535  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   ||||||||||||||  | ||| |||||||||| |||||||||    
T  44014534 ttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2831968 - 2832110
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||  |||||||| |||||| | ||     
T  2831968 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaaga-cttagaatg-aactttggagaa 2832065  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| |||||||| |||  |||||||||||||||| |||||||||    
T  2832066 tctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 34201242 - 34201099
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  34201242 cttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaaga-cttagaatgaaaatttggagaa 34201144  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||  |||||||||    
T  34201143 tctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 810791 - 810936
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| || || ||||| |||||||||||||||||| ||||||||| || ||||| ||     
T  810791 cttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatg-aatttttgtga- 810888  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  ||||| |||||||||| ||||||||||    
T  810889 actgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 2279781 - 2280000
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| || | |||| |||||||||||||| ||   ||| ||||||  | |||||||  |    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatg-gatttttgggtgt 2279879  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       |||||||||||||| |||||| |||||| ||| ||||||||||  || ||  | ||| ||| |  ||||||||||||||||| |||| ||| |||||    
T  2279880 tacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggattttgcgatctttgtcacacgagttg 2279979  T
Q  202 ctaagagttgaaccttggggt 222  Q
     | ||||||||||||||||||    
T  2279980 ttgagagttgaaccttggggt 2280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 16056778 - 16056615
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctg 109  Q
    ||||| || ||||||||||| ||||||||| |||||| || | |||| |||||||||||||||||   ||| |||||| |  |||||||| |   |||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggat-ttttgggaattacacctg 16056680  T
Q  110 aactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    ||||||||| |||||| |||||||||| |||||||||| ||||||  ||||| ||||||||||||    
T  16056679 aactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttagg 16056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 10589386 - 10589256
Alignment:
Q  112 ctcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttg 211  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || | | |||| |||||   |||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgaccttttttgcacgagttgtctagagttg 10589288  T
Q  212 aaccttggggtagcactgagaattaatgatga 243  Q
     ||||| |||||| | | ||| ||||||||||    
T  10589287 gacctttgggtaggattaagacttaatgatga 10589256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22073375 - 22073203
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||| | |||||||||||||||||||| ||||||||||||| || || | |||||||||||||||||| |||   ||| ||||||  | ||||||||     
T  22073375 cttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatg-gatttttgggag 22073277  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    |   ||||||||||||||  ||||| |||||| ||| |||||||||| ||||||  ||||| ||| ||||||||    
T  22073276 ttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgttagg 22073203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 68205 - 68036
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| ||| ||||||||||| ||||||||||||||||||||| || || ||| |||||||||||||||||  |||| ||||  |||||| |||||     
T  68205 cttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaataatttaagaa-caaacttgtgggag 68107  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   |  |||||||||||  ||||| |||||||||| |||||||||  | ||||  ||||| |||||||||    
T  68106 ttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16219378 - 16219578
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||| || ||| ||| |||||||||||||||| || | |||| |||||||||||||||||   ||| |||||| || ||||||||     
T  16219378 cttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatg-aatttttgggag 16219476  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggat-tttgcgatctatgtcgcacaagt 199  Q
    |   || |||||||||||  ||||| |||||| ||| ||||||||||   | ||  ||||| |||||||||||| |   |||||||| ||||||||||||    
T  16219477 ttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgttaggttaaatgcgatctttgtcgcacaagt 16219576  T
Q  200 tg 201  Q
    ||    
T  16219577 tg 16219578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47832267 - 47832194
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || ||| | |||||||| ||||||    
T  47832267 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatctggaa 47832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11995720 - 11995765
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 46  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  11995720 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaa 11995765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 16324456 - 16324392
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||||| |||||||||||||||||||||||||| || || ||  |||||||||||||||||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaa 16324392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18006100 - 18006059
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgatta 42  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  18006100 cttagatgtttttgagtgcctgaacatgtctaataatgatta 18006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 9389361 - 9389430
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||| ||||||||| ||| || ||| |||| ||||||||||| || |||||| |||||||||||||||||    
T  9389361 gatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaa 9389430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 14045281 - 14045212
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||||| ||||||||||||||| |||| |||||||||||||| | |  | |||| |||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 14045212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 14355311 - 14355242
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||||| ||||||||||||||| |||| |||||||||||||| | |  | |||| |||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 14355242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21064824 - 21064897
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| || |||| ||||||||||||  |||||||||||||||  | | |||||||||||||||| |||||    
T  21064824 cttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaacttggaa 21064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2529639 - 2529682
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  2529639 cttagatgattttgagtgcctgaatatgtataataatgattagg 2529682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 12901852 - 12901793
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 12901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 14953619 - 14953560
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14953619 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 14959585 - 14959526
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14959585 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 26420399 - 26420340
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  26420399 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 44408043 - 44408102
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  44408043 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 9177252 - 9177294
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattagg 9177294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 11768526 - 11768568
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattagg 11768568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 16092251 - 16092185
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||    
T  16092251 ttagatgattttgagtgcctgaatatgtataagaatgattaggtaggtttttagattgagattgaac 16092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 17017297 - 17017351
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||| ||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  17017297 ttagggttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtag 17017351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 1867650 - 1867719
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||||| |||| |||||||||| |||| |||||||||||||| | |  | |||| |||||||||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 1867719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 11547953 - 11548010
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  11547953 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 11554549 - 11554606
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  11554549 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 15008107 - 15008148
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| || ||||||||||||||||| |||||||||||||    
T  15008107 ttagatgattctgagtgcctgaacatgtataataatgattag 15008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 11238655 - 11238699
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  11238655 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 11238699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 20702669 - 20702733
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  20702669 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 32768102 - 32768038
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  32768102 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16261 - 16506
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| ||||| |     
T  16261 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaaa 16360  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||| ||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  16361 tctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagtt 16460  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | || ||||||||||||||||||| | ||||| |||||||||||||    
T  16461 gttaggagttgaaccttggggtagtattgagacttaatgatgatgt 16506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 50209875 - 50210119
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  50209875 cttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt-agaatgaaacttttggaat 50209973  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  50209974 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 50210073  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | ||||| |||||||||||||    
T  50210074 gttgagagttgaacctttgggtagtattgagacttaatgatgatgt 50210119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 34510239 - 34509995
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| |     
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 34510141  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||| | ||||||| |||||||| || ||| |||| ||||    
T  34510140 tctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttgcgacctttgttgcacgagtt 34510041  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | || ||||||||||||||||| | ||||| |||||||||||||    
T  34510040 gttgagggttgaaccttggggtagtattgagacttaatgatgatgt 34509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22532728 - 22532484
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||| |     
T  22532728 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaa-cttttggaaa 22532630  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| |||||||||||| | |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| || ||| |||| || |    
T  22532629 tctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcgacctttgttgcacgagct 22532530  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||| ||||| | ||||| |||||||||||||    
T  22532529 gttgagagttgaaccttgaggtagtattgagacttaatgatgatgt 22532484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 433466 - 433243
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  433466 cttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttgggaa 433368  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||   || | ||| |  ||||||||||||||||| |||||||| |||     
T  433367 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatgcttgtttaggattttgcgatctttgtcgcacgagtc 433268  T
Q  201 gctaagagttgaaccttggggtagc 225  Q
    | | |||||||||||||||||||||    
T  433267 gttgagagttgaaccttggggtagc 433243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22354234 - 22354478
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||  || |||| ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  22354234 cttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtgggat 22354333  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  22354334 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttagg-ttttgcgacctttgttgcacgagtt 22354432  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||| |||||||||  ||||| | | ||| ||||||| |||||    
T  22354433 gttgagaattgaacctttaggtagtattaagacttaatgaggatgt 22354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20135646 - 20135424
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttggga 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||  |||||||||||| |||||| |    
T  20135646 cttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaaga-cttagaatgaaacattttggaa 20135548  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| || ||||| || ||| | || |||    
T  20135547 ttctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgtacgagt 20135449  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    || | ||||||||||||| ||||||    
T  20135448 tgttgagagttgaaccttagggtag 20135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 27250402 - 27250629
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||           |||||| | ||||||    
T  27250402 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaa-----------tgaaacctgtgggat 27250490  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||||||| ||||||||  ||||||||| || ||| |||| ||||    
T  27250491 tctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgtta-tattttgcgacctttgttgcacgagtt 27250589  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| ||| | |||||||    
T  27250590 gtcgagagttgaacctttgggtagcattgatacttaatga 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22355847 - 22356080
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||           |||||||| || ||||||    
T  22355847 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaatgaaatttgtgggat 22355935  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtg-ccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| ||||||||||||| || | |||||||||||| |||||||||||| | |||||| ||||||| || || ||| |||| |||    
T  22355936 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgtta-gattttgagacctttgttgcacgagt 22356033  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  22356034 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 22356080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22357533 - 22357766
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||           |||||||| || ||||||    
T  22357533 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaatgaaatttgtgggat 22357621  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtg-ccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| ||||||||||||| || | |||||||||||| |||||||||||| | |||||| ||||||| || || ||| |||| |||    
T  22357622 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgtta-gattttgagacctttgttgcacgagt 22357719  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  22357720 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 22357766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 20846892 - 20847119
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||           |||||||| || | |    
T  20846892 cttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 20846980  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  20846981 tttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 20847079  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    | | ||  || |||||| |||||||| | ||| |||||||    
T  20847080 gttgaggattaaacctttgggtagcattaagacttaatga 20847119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21027128 - 21026901
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||||||||||||||||||           |||||||| || | |    
T  21027128 cttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 21027040  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||| || ||| |||| ||||    
T  21027039 tctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta-gattttgcgacctttgttgcacgagtt 21026941  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    | | ||  || |||||| |||||||| | ||| |||||||    
T  21026940 gttgaggattaaacctttgggtagcattaagacttaatga 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33681468 - 33681301
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||  ||||| ||     
T  33681468 cttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaat-ttttgtgag 33681370  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg 169  Q
    |   ||||||||||||||  |||||||||||||||| |||||||| | ||||||  |||||||||||||    
T  33681369 ttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 38801065 - 38801234
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||           |  ||||| |||||||    
T  38801065 ttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaa-----------ttgaacttgtgggatt 38801153  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  38801154 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcga 38801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20919060 - 20918917
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||  || ||| | ||     
T  20919060 cttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatttaaatttggagaa 20918962  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  20918961 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21754494 - 21754350
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||| |||||||||||||| |||| |||||||||||  ||||| ||     
T  21754494 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactttagaatgaa--ttttgtga- 21754398  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  21754397 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20091136 - 20091281
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttggga 99  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||| |||||  ||||||||||||   ||||||    
T  20091136 cttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaaga-cttagaatgaaacaacttggga 20091234  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||||||||||||||||  ||||||||| | ||||||||||||||    
T  20091235 ttctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 52927643 - 52927815
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||||||||||||||| ||||| || ||||   |     
T  52927643 cttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatg-aattttttaaag 52927741  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    |  |||||||||||||||  ||||| |||||| ||| |||||||| |   ||||  ||||| ||||||||||||    
T  52927742 ttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttgttagg 52927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 20248734 - 20248592
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattc 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||||||| ||| ||||||||| || ||||| ||  |    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactttagaatg-aatttttgtga-ac 20248637  T
Q  103 tg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    || ||||||||||||||  ||||| ||||||| || |||||||||    
T  20248636 tgaacctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 22238088 - 22237946
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||| || || ||||||||||| |||||||||||||||| |||||||  ||||| ||     
T  22238088 cttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattttggaatgaa--ttttgtgag 22237991  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcga 145  Q
    |   || |||||||||||  ||||| |||||| ||| ||||||||    
T  22237990 ttgcacttgaactcgccatggcgagtagaggccctcgcctcgcga 22237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22921529 - 22921672
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||| ||||   ||| |||| | || ||||| ||     
T  22921529 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagtttaagaacg-aatttttgagag 22921627  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcga 145  Q
    |  ||| |||||||||||  ||||| |||||||||| ||||||||    
T  22921628 ttagacttgaactcgccatggcgagtagaggctctcgcctcgcga 22921672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21162187 - 21162117
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    |||| ||||||||||||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||    
T  21162187 cttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21301200 - 21301245
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21301200 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 16759005 - 16758890
Alignment:
Q  107 ctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaag 206  Q
    |||||||||||| ||| || |||||| ||||||||||||||  || ||  ||||| |||    ||||||||||||||||| |||||||| ||||| | ||    
T  16759005 ctgaactcgccatagcaagtagaggccctcacctcgcgagttgcctagttacagaatgctcgtttaggattttgcgatctttgtcgcacgagttgttgag 16758906  T
Q  207 agttgaaccttggggt 222  Q
    ||||||||||||||||    
T  16758905 agttgaaccttggggt 16758890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 26065295 - 26065176
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    ||||||||||||| |||||| |||||||||| ||||||||||  |||||  ||||| | ||||| ||||| ||||||||||| |||||||| || || ||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 26065196  T
Q  205 agagttgaaccttggggtag 224  Q
     ||||| | |||||||||||    
T  26065195 tgagtttatccttggggtag 26065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 28194114 - 28194254
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctg 104  Q
    |||| |||||||||||||||| ||| | || ||||||||||| || |||||| |||||||||||||| ||   ||| |||||||| | |||| || |       
T  28194114 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatc-tttgtgagttgc 28194212  T
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||||  || || |||||||||| |||||||||    
T  28194213 acctgaactcgccatggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43697819 - 43697746
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||| | |||||||| || || | |||| ||||||| |||||||||    
T  43697819 cttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaa 43697746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 35260852 - 35260964
Alignment:
Q  113 tcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgctaagagttg 211  Q
    |||||| |||||| |||||| ||| ||||||||||  |||||  ||| | | ||||| ||||||||||||||||| |||||||| || || || ||||||    
T  35260852 tcgccatagcgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggattttgcgatctttgtcgcacgagatgttatgagttg 35260951  T
Q  212 aaccttggggtag 224  Q
    ||| |||||||||    
T  35260952 aacattggggtag 35260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 35981352 - 35981419
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||| |||||||||||||||| ||| | || ||||||||||| || |||||| |||||||||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgg 35981419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 21895895 - 21895965
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| || |||||||||||||| || |||||||||||||||| |  | |||| |||||||||||||||    
T  21895895 ttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgg 21895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 16367873 - 16367946
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaa 75  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| | |  | |||| ||||| ||||||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaa 16367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 35260718 - 35260787
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    ||||||| || ||||||||||||||||| |||||||||||||| | |  | |||| ||||||||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 35260787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 21438216 - 21438157
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  21438216 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 23763633 - 23763574
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  23763633 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 26065441 - 26065382
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 26065382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41049630 - 41049701
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    |||||||| || ||||||||||||||||| |||||||| ||||| | |  | |||| |||||||||||||||    
T  41049630 cttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgg 41049701  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 16381698 - 16381632
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    ||||||| ||||||||||||| |||||| ||| |||||||||||| |  | |||||||| |||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16759185 - 16759115
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    |||||||| |||||||||||| |||| || |||||||||||||| | |  | |||| ||||||||||||||    
T  16759185 cttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctg 16759115  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 19063942 - 19063884
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  19063942 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 19111832 - 19111774
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  19111832 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21342607 - 21342521
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatg 87  Q
    |||||||| ||||||||| ||||| |||| |||||||||||||| | |  | |||| ||||| ||||||||| || |||||| ||||    
T  21342607 cttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctgggaaaattttaaaatg 21342521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21347472 - 21347386
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatg 87  Q
    |||||||| ||||||||| ||||| |||| |||||||||||||| | |  | |||| ||||| ||||||||| || |||||| ||||    
T  21347472 cttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctgggaaaattttaaaatg 21347386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 21861157 - 21861227
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| || |||||||||||||| || |||||||||||||| | |  | |||| |||||||||||||||    
T  21861157 ttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 21861227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 16093479 - 16093552
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaa 75  Q
    ||||||| ||||||||||||| | |||| ||||||||||| || | |  | |||| ||||||||||||||||||    
T  16093479 ttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaa 16093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 21162121 - 21162056
Alignment:
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgt 170  Q
    ||||| ||||||||  |||||||||||||||| |||||||||  |||| ||| |||| ||||||||    
T  21162121 acctgtactcgccatggcgagcagaggctctcgcctcgcgagcaaccctgaaccagaatgccttgt 21162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21342384 - 21342332
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggt 222  Q
    ||||| ||||||||||  |||||||| ||||| | ||||||||||||||||||    
T  21342384 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21347249 - 21347197
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggt 222  Q
    ||||| ||||||||||  |||||||| ||||| | ||||||||||||||||||    
T  21347249 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33156 - 33401
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |     
T  33156 cttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaacttttggaag 33255  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||| ||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||    
T  33256 tcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcatacaagtt 33355  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||||||||| | ||||| |||||||||||||    
T  33356 gttaagagttgaaccttggggtagtattgagacttaatgatgatgt 33401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25727 - 25971
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||  |||||| |     
T  25727 cttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaat-ttttggaaa 25825  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  25826 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 25925  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||| ||||||||||||||| | ||||| |||||||||||||    
T  25926 gctaagagctgaaccttggggtagtattgagacttaatgatgatgt 25971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 167; Significance: 2e-89; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4967 - 4722
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagatttt-agaatgaaacttttggga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4967 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggga 4869  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||| || ||| |||||||||||||||||  ||||||||||||    
T  4868 atctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagt 4769  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||||||||| | ||||| |||||||||||||    
T  4768 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12549 - 12304
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagatttt-agaatgaaacttttggga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  12549 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggga 12451  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||| || ||| |||||||||||||||||  ||||||||||||    
T  12450 atctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagt 12351  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||||||||| | ||||| |||||||||||||    
T  12350 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 12304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22501 - 22256
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagatttt-agaatgaaacttttggga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  22501 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggga 22403  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||| || ||| |||||||||||||||||  ||||||||||||    
T  22402 atctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagt 22303  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||||||||| | ||||| |||||||||||||    
T  22302 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 22256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 166; Significance: 6e-89; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16877 - 17121
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  16877 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt-agaatgaaacttttggaat 16975  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| || ||| |||| ||||    
T  16976 tctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagtt 17075  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||| ||||||||||||| | ||||| ||||| |||||||    
T  17076 gttgagagttaaaccttggggtagtattgagacttaatcatgatgt 17121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 79024 - 79096
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgga 73  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  79024 cttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 79110 - 79213
Alignment:
Q  121 gcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgctaagagttgaaccttgg 219  Q
    ||||| |||||||||| ||||||||||  ||||   |||||  |||||||| ||||||||||||||| |||||||| |||   | |||||||||||||||    
T  79110 gcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtttaggattttgcgatctttgtcgcacgagtcattgagagttgaaccttgg 79208  T
Q  220 ggtag 224  Q
    |||||    
T  79209 ggtag 79213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 39218 - 38975
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||    
T  39218 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttt-gaatgaaacttgtgg-at 39121  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||| || ||| |||| ||||    
T  39120 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagtt 39021  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  39020 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 38975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 162; Significance: 1e-86; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 52371 - 52128
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  52371 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 52272  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||| || ||| |||| ||||    
T  52271 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg-ttttgcgacct-tgttgcacgagtt 52174  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  52173 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 52128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 167652 - 167879
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||           ||| |||||||| ||||||    
T  167652 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct-----------agattgaaacttgtgggat 167740  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| | ||    
T  167741 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgaatt 167839  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| | ||| |||||||    
T  167840 gtcgagagttgaacctttgggtagcattaagacttaatga 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23660481 - 23660237
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  23660481 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttt-ggaa 23660383  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| || || | | |||| ||||    
T  23660382 tctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttttgtgacctttattgcacgagtt 23660283  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
      | |||||||||||||||||||| | ||||| ||| |||||||||    
T  23660282 attgagagttgaaccttggggtagtattgagacttattgatgatgt 23660237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27754034 - 27753790
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  27754034 cttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 27753935  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||  || |||| ||||    
T  27753934 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgtta-gattttgcgaccttcgttgcacgagtt 27753836  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   ||||||||| |||||| ||||| | ||| |||||||||||||    
T  27753835 gtcgagagttgaagcttgggatagcattaagacttaatgatgatgt 27753790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22737842 - 22738086
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||| ||||||    
T  22737842 cttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtgggat 22737941  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| || ||| |||| ||||    
T  22737942 tctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagtt 22738040  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||| |||||||||||||||| | | ||| ||||||| |||||    
T  22738041 gttgagaattgaaccttggggtagtattaagacttaatgaggatgt 22738086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32451591 - 32451815
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  32451591 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtgggat 32451690  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  32451691 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 32451789  T
Q  201 gctaagagttgaaccttggggtagca 226  Q
    |   |||| |||||||||||||||||    
T  32451790 gtcgagagatgaaccttggggtagca 32451815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22730895 - 22731114
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  22730895 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 22730994  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| | ||||| |||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| |||| || |    
T  22730995 tctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgttagg-ttttgcgatctttgttgcacgagct 22731093  T
Q  201 gctaagagttgaaccttgggg 221  Q
    | | | | |||||||||||||    
T  22731094 gttgataattgaaccttgggg 22731114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 298477 - 298714
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  298477 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagattt-agaatgaaacttgtgggat 298575  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  298576 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 298674  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    | | ||  || |||||| |||||||| | ||| |||||||    
T  298675 gttgaggattaaacctttgggtagcattaagacttaatga 298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23076899 - 23076657
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||| ||||||||||||| ||||| ||    
T  23076899 cttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaaga-tttagaatgaaac-tttggaat 23076802  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| || ||| |||| ||||    
T  23076801 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagtt 23076703  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||| ||||||||| | || || || ||||||||||    
T  23076702 gttgagagttgaactttggggtagtattgggattttatgatgatgt 23076657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22337574 - 22337330
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |  |    
T  22337574 cttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt-agaatgaaactttttgagt 22337476  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||| | ||||||||| ||||| || || ||| |||| ||||    
T  22337475 tctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagtt 22337376  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||||| |||| | | ||| |||||||||||||    
T  22337375 gttgagagttgaaccttggagtagtattaagacttaatgatgatgt 22337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23286309 - 23286076
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||           ||||| || || |||    
T  23286309 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaa-----------tgaaaattgtgagat 23286221  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||| || ||| |||  ||||    
T  23286220 tatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcgacctttgttgcatgagtt 23286122  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | | ||| ||||||| |||||    
T  23286121 gttgagagttgaacctttgggtagtattaagacttaatgaagatgt 23286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37789 - 38000
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||           | |||||| || |||    
T  37789 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctggaa-----------ttaaacttgtgagat 37877  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||||||| |||| ||||||| || ||||||| || ||| |||| ||||    
T  37878 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgtta-gactttgcgacctttgttgcacgagtt 37976  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||||| ||||||    
T  37977 gtcgagagttgaacctttgggtag 38000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 23071625 - 23071768
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  23071625 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaa 23071723  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||    
T  23071724 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20309553 - 20309383
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||||           | |||||| ||||||    
T  20309553 cttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 20309465  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  20309464 tctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta-gattttgcga 20309383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22133879 - 22134020
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| | |||| |||||||||||  ||||| ||     
T  22133879 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgtga- 22133975  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcga 145  Q
     |||| ||||||||||||  |||||||||||||||| ||||||||    
T  22133976 actgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 23654072 - 23654286
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||           |||| ||||| |||||||    
T  23654072 cttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaactgttgggat 23654160  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| |||||||||||| |||||||             |||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  23654161 tctgacttgaactcgccacggcgagca-------------cgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 23654246  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| | ||| |||||||    
T  23654247 gtcgagagttgaacctttgggtagcattaagacttaatga 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 28406436 - 28406297
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattc 102  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||||||| |||||||||||||| ||| ||||| ||  |    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaat-aaaattttgtga-ac 28406339  T
Q  103 tg-acctgaactcgccacagcgagcagaggctctcacctcgc 143  Q
    || ||||||||||||||  ||||| |||||||||| ||||||    
T  28406338 tgaacctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 23708282 - 23708500
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| ||||||||| |||||||| | || ||||||||||||| |   ||||| |||||||||| | | | || ||| |||||| |  |||||||| |    
T  23708282 ttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatcggaatag-tttaagaatggat-ttttgggagt 23708379  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       |||||||||||||| |||||| |||||||||| ||| |||||| ||||||  ||||| ||| |  ||||||||||||||||| |||||||| |||||    
T  23708380 tacacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttg 23708479  T
Q  202 ctaagagttgaaccttggggt 222  Q
     | | ||||||||||||||||    
T  23708480 ttgatagttgaaccttggggt 23708500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28291964 - 28292027
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagatt 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  28291964 cttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25176301 - 25176228
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |  || ||| |||||||||||||||||    
T  25176301 cttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaa 25176228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 19672118 - 19672068
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggg 220  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||||||||    
T  19672118 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggg 19672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 23207812 - 23207744
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||| || ||||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 23207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 39827602 - 39827646
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 46  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaa 39827646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 24503532 - 24503473
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  24503532 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 22412722 - 22412792
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| || ||||||||||||||||| | |||||||||||| | |  | |||| |||||||||||||||    
T  22412722 ttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgg 22412792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 23005263 - 23005221
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattagg 23005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 34137454 - 34137412
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  34137454 ttagatggttttgagtgcctgaacatgtataagaatgattagg 34137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22740716 - 22740768
Alignment:
Q  94 ttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||| |||| | |||||||||||| ||||||||| |||||| |||||||||    
T  22740716 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 23171460 - 23171416
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  23171460 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 23171416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 23582717 - 23582673
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  23582717 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 23582673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20862 - 20618
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  20862 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtgggat 20763  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||| || ||| |||| ||||    
T  20762 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagtt 20664  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||  ||||| | ||| |||||||||||||    
T  20663 gtcgagagttgaaccttggaatagcattaagacttaatgatgatgt 20618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 363 - 164
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |  |    
T  363 cttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt-agaatgaaactttttgagt 265  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  264 tctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13551 - 13307
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  13551 cttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtgggat 13452  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||| || ||| |||| ||||    
T  13451 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg-ttttgcgacctttgttgcacgagtt 13353  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||| ||||||||| | || || ||||||| |||||    
T  13352 gttgagagttgaactttggggtagtattgggacttaatgaagatgt 13307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 34579 - 34437
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  34579 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttggagaa 34481  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcga 145  Q
    ||||||| ||||||||||  |||||||||||||||| ||||||||    
T  34480 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 51546 - 51770
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||||||| | ||||||||||| ||||||    
T  51546 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtcgaatgaaacttgtgggat 51645  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  51646 tttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 51744  T
Q  201 gctaagagttgaaccttggggtagca 226  Q
    |   ||||||||||||||||||||||    
T  51745 gtcgagagttgaaccttggggtagca 51770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 32994 - 32826
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||| || ||||||||||||||||| |||||||||||||||| || | |||| ||||||||||| |||||   | | ||||||  | |||||||| |    
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatg-gatttttgggagt 32896  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
       ||||||||||||||  ||||| |||||| ||| |||||||||  ||||||  ||||| |||||||||    
T  32895 tacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 144; Significance: 8e-76; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 125041 - 124800
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||   ||||||||||||||| ||||||||||||| ||||||    
T  125041 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtgggat 124945  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||| || ||| |||| ||||    
T  124944 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgtta-gattttgcgacctttgttgcacgagtt 124846  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| ||||| | ||| ||||||| |||||    
T  124845 gtcgagagttgaaccttgggatagcattaagacttaatgaggatgt 124800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 63020 - 62932
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaa 89  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||||||||||    
T  63020 cttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 136132 - 136173
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    ||||||||||||| |||||| |||||||||| ||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 144840 - 144881
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    ||||||||||||| |||||| |||||||||| ||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 339613 - 339853
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| |||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||     
T  339613 cttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttgggaa 339711  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||| || ||| |||| |||     
T  339712 tctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgttagg-ttttgcgacctttgttgcacgagtc 339810  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatga 243  Q
    | |||| ||||||||||||||||| | ||||| ||||||||||    
T  339811 gttaagggttgaaccttggggtagtattgagacttaatgatga 339853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 801 - 557
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||||||||||||| |||     
T  801 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaactttt-ggaa 703  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||| ||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||||| | || ||| |||  ||||    
T  702 tctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcaacctttgttgcatgagtt 603  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||||| ||||||| |||||    
T  602 gttgagagttgaaccttggggtagtattgagacttaatgaggatgt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 3928 - 3685
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggatt 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| |||||| |||||| |||||||    
T  3928 ttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggatt 3829  T
Q  102 ctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||  |||||||| |||||||| || ||| |||| |||||    
T  3828 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttagg-ttttgcgacctttgttgcacgagttg 3730  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | ||| |||||| ||||||||| | | ||| ||||||| |||||    
T  3729 ttgagaattgaactttggggtagtattaagacttaatgaggatgt 3685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 40370 - 40127
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||| ||||||| |     
T  40370 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctg-acagattgtagaatgaa-cttttggaaa 40273  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||| || ||| |||| ||||    
T  40272 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagtt 40173  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||||| |||||||||||||    
T  40172 gttgagagttgaaccttggggtagtattgagacttaatgatgatgt 40127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 140; Significance: 2e-73; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 40313 - 40072
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||| || |||    
T  40313 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaactttt-ggtttc 40215  T
Q  103 tgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgc 202  Q
    | ||||| ||||||||| |||||||||||||||| ||||||| |||||| |||||| ||||||||||||| |||||||||| || ||| |||||| |||     
T  40214 taacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttgcgacctttgttgcacaatttgt 40115  T
Q  203 taagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | ||||||||||||| |||||||| ||||| ||||||| |||||    
T  40114 tgagagttgaacctt-gggtagcattgagacttaatgaggatgt 40072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  23 aacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaactcgccacagc 122  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaactttt-ggattctgacctgaagtcgccacggc 26564  T
Q  123 gagcagagg 131  Q
    |||||||||    
T  26563 gagcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39593 - 39680
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatga 88  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  39593 cttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagaatgtagaatga 39680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 59179 - 59308
Alignment:
Q  15 agtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaactc 114  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||  |||||| ||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaacctgacc-gaactc 59276  T
Q  115 gccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||  |||||||||||||||| |||||||||    
T  59277 gccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 26213 - 26110
Alignment:
Q  143 cgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatg 242  Q
    ||||||||||||||||  ||||||||||||||||||||||| || ||| |||| | ||| | |||||||||||||||||||||| ||||| ||||||| |    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgagg 26114  T
Q  243 atgt 246  Q
    ||||    
T  26113 atgt 26110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23341 - 23097
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||| ||||||  || |||||| ||    
T  23341 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattgtagaattgaa-ttttggaat 23243  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||| |||| ||||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  23242 tctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 23143  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||||| |||||||||||||    
T  23142 gttgagagttgaaccttggggtagtattgagacttaatgatgatgt 23097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23964 - 24181
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  23964 cttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaa-attgtagaatgaaacttgtgggat 24062  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||| || ||| |||| ||||    
T  24063 tctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgtta-gattttgcgacctttgttgcacgagtt 24161  T
Q  201 gctaagagttgaaccttggg 220  Q
    |   |||||||||| |||||    
T  24162 gtcgagagttgaactttggg 24181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8934 - 8690
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||| |||||||| || |||| ||||| ||||||    
T  8934 cttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattgtaaaatggaacttgtgggat 8835  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| || || |||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  8834 tctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagtt 8736  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||||| |||| | | ||| |||||||||||||    
T  8735 gttgagagttgaaccttggagtagtattaagacttaatgatgatgt 8690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 134; Significance: 8e-70; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2310 - 2066
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  2310 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 2211  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  ||||| ||||||| || |||| ||||||||||  |||||||||||||||||| ||||||| || || ||| |||| ||||    
T  2210 tctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtta-gattttgtgacctttgttgcacgagtt 2112  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| ||| | | ||| ||||||| |||||    
T  2111 gtcgagagttgaaccttgggatagtattaagacttaatgaggatgt 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 207181 - 207324
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  207181 cttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 207279  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  207280 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 119214 - 119255
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattag 119255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 8198 - 8413
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctg 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  8198 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttttggaattctg 8297  T
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgcta 204  Q
     ||| |||||||||| | ||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||  || |||| ||||| |     
T  8298 gcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttgcgaccttcgttgcacgagttgttg 8396  T
Q  205 agagttgaaccttgggg 221  Q
    |||||||||| ||||||    
T  8397 agagttgaacgttgggg 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 5783 - 6027
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||| | |||||||| ||  |||||    
T  5783 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagattattgaatgaaatttgcgggat 5882  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||| ||||| |||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||| || ||| |||| ||||    
T  5883 tctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagtt 5981  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
        ||||| |||||||||| ||||| | ||| |||||||||||||    
T  5982 atcgagagtggaaccttgggatagcattaagacttaatgatgatgt 6027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10617 - 10378
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttggga 99  Q
    ||||||||||||||||||||| |||||| ||| || ||||||||||       |||||||||||||||||||||||||||||||||||||  ||||   |    
T  10617 cttagatgcttttgagtgccttaacatgcctagtagtgattaggaa-------agaatgagattgaacctggaaagattttagaatgaaaaattttcaaa 10525  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||| ||||||||||  || | |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  10524 ttctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaagt 10425  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||||||||| | ||||| ||||| |||||||    
T  10424 tgttaagagttgaaccttggggtagtattgagacttaataatgatgt 10378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 128; Significance: 3e-66; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32621 - 32843
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||  ||||| ||     
T  32621 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaat-ttttgtgag 32719  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |   |||  |||||||||||||||| |||||||| | |||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| | ||    
T  32720 ttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaatt 32819  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | ||||||||||||||||||||||    
T  32820 gttaagagttgaaccttggggtag 32843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 46384 - 46162
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||  ||||| ||     
T  46384 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaat-ttttgtgag 46286  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |   |||  |||||||||||||||| |||||||| | |||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| | ||    
T  46285 ttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaatt 46186  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | ||||||||||||||||||||||    
T  46185 gttaagagttgaaccttggggtag 46162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 16539 - 16324
Alignment:
Q  8 gcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacc 107  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||||  || |||||| ||||||| |    
T  16539 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattgtagaattgaa-ttttggaattctgaac 16441  T
Q  108 tgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaaga 207  Q
    ||| |||||||| |||| ||||||| |||||||||| |||||||||||||||||| | ||||||||| |||||||| || ||| |||| ||||| | |||    
T  16440 tgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgaga 16341  T
Q  208 gttgaaccttggggtag 224  Q
    ||||||||||| |||||    
T  16340 gttgaaccttgaggtag 16324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 67 - 246
Target Start/End: Complemental strand, 28223 - 28045
Alignment:
Q  67 acctggaaagattttagaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgcc 166  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||    
T  28223 acctggaaagattt-agaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcc 28125  T
Q  167 ttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||    
T  28124 ttgtcaggattttgcaatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 28045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28995 - 28924
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28995 cttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 1740 - 1932
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  1740 cttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggaaa 1837  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcac 195  Q
    ||||||||||| ||||||  |||||||||||||||| |||||||||||||||||  ||||| ||| |  ||||||||||||||||| ||||||||    
T  1838 tctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcac 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15277 - 15499
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||     
T  15277 cttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaac-tttgggaa 15375  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||| |   ||| | | | |  |||||||||| |||||| |||||||| | |     
T  15376 tctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacctatttacaaaatacttgcttaggatttttcgatctttgtcgcacgaatc 15475  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||||||||||    
T  15476 gttgagagttgaaccttggggtag 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 13102 - 13033
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    ||||||| |||||||||||||| ||||| || ||||||||||| | |  | |||| ||||||||||||||    
T  13102 ttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctg 13033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 39864 - 39691
Alignment:
Q  72 gaaagattttagaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |||||||| ||||||||| ||||||| | ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||     
T  39864 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 39766  T
Q  172 aggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||| | ||||| ||||| |||||||    
T  39765 aggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgt 39691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 74948 - 75121
Alignment:
Q  72 gaaagattttagaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |||||||| ||||||||| ||||||| | ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||     
T  74948 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 75046  T
Q  172 aggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||| | ||||| ||||| |||||||    
T  75047 aggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgt 75121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 722 - 949
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||           ||| |||||||| ||||||    
T  722 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct-----------agattgaaacttgtgggat 810  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| | ||    
T  811 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgaatt 909  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| | ||| |||||||    
T  910 gtcgagagttgaacctttgggtagcattaagacttaatga 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 675 - 837
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||| ||||||||| |     
T  675 cttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatg-aacttttggaaa 773  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtg 164  Q
    ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||    
T  774 tctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 2987 - 3057
Alignment:
Q  176 ttttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||| || ||| |||| ||||| | |||||||||||||||||||| | ||||| |||||||||||||    
T  2987 ttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13659 - 13426
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||           |||||||| ||| ||    
T  13659 cttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa-----------tgaaacttgtggcat 13571  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||| || ||| |||| ||||    
T  13570 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgtta-gattttgcgacctttgttgcacgagtt 13472  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   | |||||||||||||| ||||| | ||| |||||||||||||    
T  13471 gtcgacagttgaaccttgggatagcattaagacttaatgatgatgt 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20571 - 20426
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||  |    
T  20571 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaaga-tttagaatgaaacttttggagt 20473  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |||||||||| ||||||||  ||||||||||||||| ||||||||||    
T  20472 tctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10099 - 10310
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           | |||||| ||||||    
T  10099 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 10187  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |  ||| |||| ||||    
T  10188 tctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgaccattgttgcacgagtt 10286  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  10287 gtcgagagttgaacccttgggtag 10310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 11186 - 11416
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  11186 cttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 11274  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     |||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||| || ||| |||| ||||    
T  11275 actgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgtta-gattttgcgacctttgttgcacgagtt 11373  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatga 243  Q
    |   ||||||||||||| |||||| | | ||| ||||||||||    
T  11374 gtagagagttgaacctttgggtagaattaagacttaatgatga 11416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14098 - 14055
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  14098 cttagatgattttgagtgcctgaatatgtataataatgattagg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17239 - 17024
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||| ||     
T  17239 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgagaa 17141  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | ||||||||||||||||  |||||||||||||||| |||||||||||||| |   ||||| | | |  ||||||||||||||||| ||| |||| |||     
T  17140 tatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagtc 17041  T
Q  201 gctaagagttgaacctt 217  Q
    | | | |||||||||||    
T  17040 gttgatagttgaacctt 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  39 attaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcac 138  Q
    |||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |  | ||||| ||||||||||||  || ||||||||||||| |    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggataatctga-ctgaactcgccatggcaagcagaggctctcgc 7568  T
Q  139 ctcgcgag 146  Q
    ||||||||    
T  7569 ctcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4982 - 4738
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||| |||||||||| |||||| |||| | || ||||||||||||||||||||| ||||||||||||||| ||||||||        
T  4982 cttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaatg-aacttttgtcga 4884  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    || ||||||  |||||||  ||||||| |||||||| |||||| ||  ||||||||||||| |||| |||||||||||||||| || ||| |||| ||||    
T  4883 tcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagtt 4784  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||| ||||| | ||||| ||| ||| |||||    
T  4783 gttaagagttgaaccttgaggtagtattgagacttattgaagatgt 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17670 - 17794
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  17670 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtgggat 17769  T
Q  101 tctgacctgaactcgccacagcgag 125  Q
    ||||||||||||||||||| |||||    
T  17770 tctgacctgaactcgccacggcgag 17794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 624 - 868
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaactt-ttggga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    | |  |||||||||||| |||| |    
T  624 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctggttt-agtagagaatgaaacttgttggaa 722  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||||  ||||||||||| || | ||||| |||||||| |||||||||| | |||||||||||||| ||| || ||| |||| ||     
T  723 atctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttttcgacctttgttgcacgagc 822  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatg 245  Q
    || | |||||||||||||| ||||| | ||||| |||||| |||||    
T  823 tgttgagagttgaaccttgaggtagtattgagacttaatggtgatg 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 725 - 886
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||           | |||||| ||| ||    
T  725 cttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggaat 813  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttag 173  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  814 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgttag 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 2400 - 2172
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||           | ||||||  |||||    
T  2400 cttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctggaa-----------ttaaacttgagggat 2312  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| | ||||| |||||||||| || ||| |||| ||||    
T  2311 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgtta-gattttgcgacctttgttgcacgagtt 2213  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    |   ||||||||||||| |||||| | | ||| ||||||||    
T  2212 gtcgagagttgaacctttgggtaggattaagacttaatgat 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13943 - 13739
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||           | |||||| || |||    
T  13943 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaa-----------ttaaacttgtgagat 13855  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  13854 tctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta-gattttgcgacttttgttgcacgagtt 13756  T
Q  201 gctaagagttgaacctt 217  Q
    |   |||||||||||||    
T  13755 gtcgagagttgaacctt 13739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7058 - 6830
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||           | ||||||  |||||    
T  7058 cttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctggaa-----------ttaaacttgagggat 6970  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     |||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| | ||||| |||||||||| || ||| |||| ||||    
T  6969 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgtta-gattttgcgacctttgttgcacgagtt 6871  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    |   ||||||||||||| |||||| | | ||| ||||||||    
T  6870 gtcgagagttgaacctttgggtaggattaagatttaatgat 6830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 201
Target Start/End: Original strand, 15140 - 15326
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattc 102  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||||| ||||||||||||||||||           | |||||| | ||||||    
T  15140 tagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------taaaacttgtaggattc 15228  T
Q  103 tgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| |||||    
T  15229 tgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagttg 15326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 3929 - 3718
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  3929 cttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 3841  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  ||||||||||||||||  |||||||||||||| ||||||||||||||||| | || |||| || || ||| |||| ||||    
T  3840 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtga-gactttgtgacctttgttgcacgagtt 3742  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  3741 gttgagagttgaacctttgggtag 3718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 7993 - 7782
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  7993 cttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 7905  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  ||||||||||||||||  |||||||||||||| ||||||||||||||||| | || |||| || || ||| |||| ||||    
T  7904 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtga-gactttgtgacctttgttgcacgagtt 7806  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  7805 gttgagagttgaacctttgggtag 7782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27305 - 27347
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattagg 27347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2107 - 2250
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||| | ||     
T  2107 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaa 2205  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||    
T  2206 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 12387 - 12166
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||||| |  | || |||||| ||||||| |||     
T  12387 cttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attaattaagaatg-aactttttggaa 12290  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     |||||||||||||||||  ||||| |||||||||||||||||||||  ||||   |||||   |||  ||||||||||||||||| |||| ||| |||     
T  12289 actgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaagccctgtttaggattttgcgatctttgtcacacgagtc 12190  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||||||||||    
T  12189 gttgagagttgaaccttggggtag 12166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32542 - 32397
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||| ||||| ||     
T  32542 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa-ttttgtga- 32445  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||||||||||||||    
T  32444 actgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19725 - 19573
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttt-tggga 99  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  ||| || |     
T  19725 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatgaatttttatgtgt 19626  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccag 154  Q
    | |  ||||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  19625 tgc--acctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4804 - 5015
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||           ||||  ||||| ||||||    
T  4804 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattgaacttatgggat 4892  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| || ||||||||| |||| ||||||||||||| ||||||||||||| ||| || |||||||| || || ||| |||| ||||    
T  4893 tctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaacagagtgacttatt-ggattttgagacctttgttgcacgagtt 4991  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  4992 gtcgagagttgaacccttgggtag 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1362 - 1151
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||           |||||||| ||||||    
T  1362 cttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 1274  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||| ||||||||||  |||||||||||||||| |||| |||||||||| |||||| |||||||||| | || ||||||| || ||| |||| ||||    
T  1273 tctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtga-gactttgcgacctttgttgcacgagtt 1175  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | |||||||||| || ||||||    
T  1174 gttgagagttgaacttttgggtag 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 384 - 172
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||           |||| |||||| ||||||    
T  384 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg-----------gaattaaacttgtgggat 296  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| |||||| ||||||||| ||  |||||| ||||||||  |||||| | || ||| |||| ||||    
T  295 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 196  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   | ||||||||||| ||||||    
T  195 gtcgacagttgaacctttgggtag 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 5160 - 4948
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||           |||| |||||| ||||||    
T  5160 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg-----------gaattaaacttgtgggat 5072  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||  |||||||||||||||| |||||| ||||||||| ||  |||||| ||||||||  |||||| | || ||| |||| ||||    
T  5071 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 4972  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   | ||||||||||| ||||||    
T  4971 gtcgacagttgaacctttgggtag 4948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32512 - 32361
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |||||||||||||||           |||| |||||| ||||||    
T  32512 cttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctg-----------gaattaaacttgtgggat 32424  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagt 163  Q
    |||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  32423 tctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagt 32361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 52023 - 51857
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctg 104  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||           ||||||||  ||||||||     
T  52023 gatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaa-----------tgaaacttacgggattcta 51935  T
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  51934 acctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 51857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 133112 - 132967
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||| ||||| ||     
T  133112 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa-ttttgtga- 133015  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  133014 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 57466 - 57408
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  57466 tttgagtgcctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 57408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 5296 - 5135
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||||||           ||||||||||| || | |    
T  5296 cttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaatgaaacttgtgaggt 5208  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttag 173  Q
    ||||||||||||||||||| ||||| |||||||||  |||||||||||||| |||||||||||| ||||||||    
T  5207 tctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgttag 5135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16727 - 16560
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||            ||| |||||| ||||||    
T  16727 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctg-----------aaattaaacttatgggat 16639  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttg 180  Q
    | ||||| ||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||    
T  16638 tttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggattttg 16560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 28942 - 29081
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||| | ||     
T  28942 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaaga-cttagaatgaaaatttagagaa 29040  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
    ||||||| ||||| ||||  |||||||||||||||| |||||    
T  29041 tctgacc-gaactagccatggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 7841 - 7909
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    ||||||||||||| |||||| | |||||||| ||||||||||  |||||  ||| | ||||||||||||    
T  7841 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagg 7909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 580 - 437
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctg 109  Q
    |||||||||||| |||||||||||||||||||||||| || || ||||||||||||||| ||||||||||||||||||||  ||||| || |   |||||    
T  580 ttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaat-ttttgtgagttgcacctg 482  T
Q  110 aactcgccacagcgagcagaggctctcacctcgcgagtgacccag 154  Q
    |||||||||  |||||||||||||||| |||||||||||||||||    
T  481 aactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18620 - 18712
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaactt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  18620 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12471 - 12611
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||   |||||||||||||| | ||     
T  12471 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-catagaatgaaactttggagaa 12569  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgc 143  Q
    ||||| ||||||||||||  |||||||||||||||| ||||||    
T  12570 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 47434 - 47273
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||           |||| |||||| ||||||    
T  47434 cttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctg-----------gaattaaacttgtgggat 47346  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttag 173  Q
    |||||||||| |||||||| | | |||||||||||| |||||||||||||||| || ||||||| ||||||||    
T  47345 tctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgttag 47273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16117 - 15974
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||  | | ||||||| ||| | ||     
T  16117 cttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-ctcaaaatgaaaatttagagaa 16019  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||||    
T  16018 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7956 - 8099
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | ||     
T  7956 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaa 8054  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||| | | ||||||||||  |||||||||||||||| |||||||||    
T  8055 tct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 53134 - 53204
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| ||||||||||||||||| || |||||||||||||| | |  | |||| |||||||||||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28471 - 28616
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||   |||| |||||||||||| ||||| ||     
T  28471 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactttagaatgaaa-ttttgtga- 28568  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  28569 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 7270 - 7126
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| || ||||| ||     
T  7270 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgtga- 7173  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||||||||||||||  ||||| |||||||||| ||| |||||    
T  7172 actgaacctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8475 - 8330
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||| ||| ||||| ||| ||||| |||| ||||||||||||| || || | |||| |||||||||||||||||   ||| ||||||  | ||||||||     
T  8475 cttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttgggag 8377  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |   ||||||||||||||  |||||  ||||| ||| ||||||||||    
T  8376 ttacacctgaactcgccatggcgagtggaggccctcgcctcgcgagt 8330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 80005 - 80137
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaa 111  Q
    |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| | || ||||| |||||    
T  80005 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaa 80102  T
Q  112 ctcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||| ||  |||||||||||||||| |||||||||    
T  80103 ctcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10369 - 10226
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||| |||||||| |||||||||||||||||||||  |||||| |||||||| | ||     
T  10369 cttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaaga-cttagaaggaaactttggagaa 10271  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  10270 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9496 - 9639
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||| |||||||||  ||||||||||||||| | ||     
T  9496 cttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaaga-cttagaatgaaactttggagaa 9594  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||| ||  |||||||||||||||| |||||||||    
T  9595 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 2465 - 2609
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || || |||||||| ||||||||| ||||||||||||||||||  |||| ||     
T  2465 cttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaa--tttgtga- 2561  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  ||||| |||||||||| ||||||||||    
T  2562 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20088 - 20305
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| |  | || |||||| ||||||| |||     
T  20088 cttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctgg-attaattaagaatg-aactttttggaa 20185  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||  ||||| |||||||||| |||||| |||  || |   |||||  |||||| ||||||||||||| ||| |||||||| |||    
T  20186 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacaga-agccttgtttaggattttgcggtctttgtcgcacgagt 20284  T
Q  200 tgctaagagttgaaccttggg 220  Q
     | | ||||||||||||||||    
T  20285 cgttgagagttgaaccttggg 20305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 101853 - 101721
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||  ||||| ||     
T  101853 cttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtgaa 101756  T
Q  101 tctgacctgaactcgccacagcgagcagaggctct 135  Q
      ||||||||||||||||  |||||||||||||||    
T  101755 cttgacctgaactcgccatggcgagcagaggctct 101721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2747 - 2825
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagatt 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  2747 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 9535 - 9391
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||||||||| || ||||| ||     
T  9535 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatg-aatttttgtga- 9438  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||||||||||||||  ||||| |||||||||| |||||||||    
T  9437 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 476 - 344
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctgaa 111  Q
    |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |  |||||||| |||||| | || ||||| |||||    
T  476 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaata-cttagaatggaactttggagaatctga-ctgaa 379  T
Q  112 ctcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||||||  |||||||||||||||| |||||||||    
T  378 ctcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 45451 - 45596
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| || ||  |||||||||||||||||| |||| |||||||||||  ||||| ||     
T  45451 cttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaatgaattttttgtgaa 45550  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |   ||||||||||||||  ||||| |||||||||| |||||||||    
T  45551 ttgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24313 - 24456
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||||  |||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||| ||||||  ||||||||||||||| |  |     
T  24313 cttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaaga-cttagaatgaaactttggataa 24411  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||    
T  24412 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 161144 - 161000
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| ||||||||| || ||||| ||     
T  161144 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatg-aatttttgtga- 161047  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
     ||| ||||||| ||||||  ||||| ||||||||||||||| ||||    
T  161046 actgaacctgaagtcgccatggcgagtagaggctctcacctcacgag 161000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 447007 - 446965
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  447007 ttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 497938 - 497896
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  497938 ttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21349 - 21126
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||           |||||||| |         
T  21349 cttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaa-----------tgaaacttgt----- 21266  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
         |||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| |||||| |  |||||||| || ||| |||| ||||    
T  21265 -----cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgtt-gagttttgcgacctttgttgcacgagtt 21172  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | | ||| ||||||| |||||    
T  21171 gatcagagttgaacctttgggtagtattaagacttaatgaagatgt 21126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1963 - 2108
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||| |  ||||| |||||||||||| ||||| ||     
T  1963 cttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaa-ttttgtga- 2060  T
Q  101 tctg-acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
     ||| ||||||||||||||  || ||||||||||||| ||||||||||    
T  2061 actgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13270 - 13340
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctg 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  13270 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctg 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10987 - 10842
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||   |||| |||||||||||||||||   ||| |||||| || ||||| ||     
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatg-aatttttgtgag 10889  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |   |||||||||||||| |||||| |||||||||| ||||||||||    
T  10888 ttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6490 - 6557
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6490 cttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgt 170  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3391 - 3318
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||    
T  3391 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaa 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 15866 - 15983
Alignment:
Q  108 tgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgctaag 206  Q
    ||||||||||| |||||| | |||| ||| ||||||||||  |||||  ||||| ||||||||| ||||||||||||||| |||||||||||||| || |    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatg 15965  T
Q  207 agttgaaccttggggtag 224  Q
    ||||||||||| ||||||    
T  15966 agttgaacctttgggtag 15983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 13435 - 13367
Alignment:
Q  157 acagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||| ||||||||| ||||||||||||||| |||||||| ||||| || ||||| |||||||||||||    
T  13435 acagaatgccttgtttaggattttgcgatctttgtcgcacgagttgttatgagttaaaccttggggtag 13367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 13665 - 13595
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| || | ||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  13665 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 13595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 13399 - 13227
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| || || ||| | |||||||||||||||   ||| |||||| || ||||| ||     
T  13399 cttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatg-aatttttgtgag 13301  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    |   ||||||||||||||  ||||| |||||| ||| |||||||||  | ||||  ||||| ||||||||||||    
T  13300 ttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgttagg 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 29892 - 29950
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  29892 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 41888 - 41946
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  41888 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 41946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10603 - 10540
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagatt 64  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  10603 cttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7719 - 7864
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||| ||   |||| ||||||||||||| |||   ||| |||||| || |||||||      
T  7719 cttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatg-aatttttggggg 7817  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |   |||||||||||||| |||||| |||||||||| ||||||||||    
T  7818 ttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 1663 - 1546
Alignment:
Q  83 gaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcg 182  Q
    |||| |||||| ||| ||||| | |||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| |||||| ||| ||||||    
T  1663 gaattaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcg 1565  T
Q  183 atctatgtcgcacaagttg 201  Q
    | || ||| |||| |||||    
T  1564 acctttgttgcacgagttg 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 7640 - 7523
Alignment:
Q  83 gaatgaaacttttgggattctgacctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttgttaggattttgcg 182  Q
    |||| |||||| ||| ||||| | |||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| |||||| ||| ||||||    
T  7640 gaattaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcg 7542  T
Q  183 atctatgtcgcacaagttg 201  Q
    | || ||| |||| |||||    
T  7541 acctttgttgcacgagttg 7523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 1733 - 1692
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  1733 ttagatgcttttgcgtgcctgaacatgtctaatattgattag 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 7710 - 7669
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  7710 ttagatgcttttgcgtgcctgaacatgtctaatattgattag 7669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2306 - 2378
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgga 73  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||||    
T  2306 cttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgga 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 6987 - 6852
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctgacctg 109  Q
    ||||||||||||| |||||||||||||| |||||||| || || ||| |||||||||||||||||   ||| |||| ||||||| ||||| |   |||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagtttaagaacgaaacttgtgggagttatacctg 6888  T
Q  110 aactcgccacagcgagcagaggctctcacctcgcga 145  Q
    |||||||||  |||||  ||||| ||| ||||||||    
T  6887 aactcgccatggcgagtggaggccctcccctcgcga 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1038 - 897
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaac-ttttggga 99  Q
    ||||||||  |||||||||  |||||||||||||| |||||||||  |||||||  ||||||| | |||||||||||  ||||||||||||   ||||||    
T  1038 cttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaaaga-cttagaatgaaacaacttggga 940  T
Q  100 ttctgacctgaactcgccacagcgagcagaggctctcacctcg 142  Q
    ||||| |||||||||||||  ||||||||| | |||| |||||    
T  939 ttctgccctgaactcgccatggcgagcagatgttctcgcctcg 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10230 - 10289
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatga 60  Q
    |||||||| |||||||||||||||||||||||||||||||||| || || | ||||||||    
T  10230 cttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 10305 - 10347
Alignment:
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgagt 147  Q
    |||||||||||||| |||||| |||||||||| ||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagt 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 690 - 755
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattga 66  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| || |||||| |||||||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6052 - 5979
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| || || ||| ||||||||||| |||||    
T  6052 cttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaa 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43446 - 43519
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||| |||||||| || || | |||| |||||||||||||||||    
T  43446 cttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 43519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47366 - 47439
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||| |||||||| || || | |||| |||||||||||||||||    
T  47366 cttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 47439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 130362 - 130222
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggattctg 104  Q
    |||| ||||||||||||||||||||||| | |||||||| || || | |||| |||||||||||||||||   ||| ||||||  | |||||||| |       
T  130362 gatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttgggaattac 130264  T
Q  105 acctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    |||| |||||||||  |||||||||||||||| |||||||||    
T  130263 acctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 224
Target Start/End: Original strand, 60479 - 60598
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    ||||||||||||| |||||| |||||||||| ||||||||||  |||||  ||||| | | ||| ||||| ||||| ||||| |||||||| || || ||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgagatgtta 60578  T
Q  205 agagttgaaccttggggtag 224  Q
     |||||||||||||||||||    
T  60579 tgagttgaaccttggggtag 60598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 60301 - 60343
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattagg 60343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 242479 - 242435
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtag 55  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  242479 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 12453 - 12381
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||| || | |||| |||||||||||||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaa 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15492 - 15565
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||| || | |||| |||||||||||||||||    
T  15492 cttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaa 15565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5784 - 5852
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||  | |||||| ||||||||||||    
T  5784 cttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 227942 - 227878
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||||||| ||||||| |||||||||||||||| || | |||| |||||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaa 227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 225698 - 225644
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  225698 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggtag 225644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7072 - 6931
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||| || | |||| | |||||||||||||||   ||| ||||||  | ||||||||     
T  7072 cttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatg-gatttttgggaa 6974  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgc 143  Q
    |   ||||||||||||||  ||||| |||||| ||| ||||||    
T  6973 ttacacctgaactcgccatggcgagtagaggccctcgcctcgc 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14452 - 14311
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgggat 100  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||| || | |||| | |||||||||||||||   ||| ||||||  | ||||||||     
T  14452 cttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatg-gatttttgggaa 14354  T
Q  101 tctgacctgaactcgccacagcgagcagaggctctcacctcgc 143  Q
    |   ||||||||||||||  ||||| |||||| ||| ||||||    
T  14353 ttacacctgaactcgccatggcgagtagaggccctcgcctcgc 14311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 80796 - 80726
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 80726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 128557 - 128630
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg-aaggaatgtagaatgagattgaacctggaaa 75  Q
    ||||||| |||| |||||||||| |||| |||||||||||||| |||  ||| ||| ||||||||||||||||||    
T  128557 ttagatgattttaagtgcctgaatatgtataataatgattaggcaagttatg-agattgagattgaacctggaaa 128630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  106 cctgaactcgccacagcgagcagaggctctcacctcgcgag 146  Q
    ||||||||||||| |||||| |||||||||| |||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

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Target: scaffold0423 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10934 - 10970
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  10934 cttagatgcttttgagtgcctgaacatgtctaataat 10970  T

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Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2312 - 2245
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    |||||||| ||||||||||||||| |||   | ||||||||||||| || ||||||||||||||||||    
T  2312 cttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 25640 - 25567
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaaa 75  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| | |  | |||| ||||||||||| ||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaa 25567  T

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Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24182 - 24255
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctggaa 74  Q
    |||||||| ||||||||||||||| || | |||||||||||||| | |  | |||| |||||||||||||||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaa 24255  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 103257 - 103316
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  103257 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 103316  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 332850 - 332784
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaac 68  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||||| |  | |||| |||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

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Target: scaffold0601 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 7188 - 7118
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||| | |  | |||| |||||||||||||||    
T  7188 ttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 7118  T

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Target: scaffold0525 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 3560 - 3618
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||| | |||||||| || ||||||||||    
T  3560 tttgagtgcctgaacatacctagtaatgattagggatgaatgtaggatcagattgaacc 3618  T

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Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 10599 - 10541
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 10541  T

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Target: scaffold0233 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 14224 - 14282
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  14224 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 14282  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 55271 - 55313
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  55271 ttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 9762 - 9704
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 9704  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 268186 - 268116
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacctgg 72  Q
    ||||||| || | ||||||||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  268186 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 268116  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 307524 - 307460
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaggaatgtagaatgagattgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  307524 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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