View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0174_low_14 (Length: 226)
Name: NF0174_low_14
Description: NF0174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0174_low_14 |
 | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0485 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 15349357 - 15349501
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15349357 |
tccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
15349456 |
T |
|
| Q |
101 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15349457 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
15349501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 14687292 - 14687435
Alignment:
| Q |
8 |
atattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctcttgatccct |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
14687292 |
atattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcctcttgatccct |
14687391 |
T |
|
| Q |
102 |
tgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
14687392 |
tgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14687435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 42711288 - 42711434
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| ||||||||||||| |||||| ||||||||||| ||||| | ||||||||||| ||| |||||| ||||||| || |||||||||||||| |
|
|
| T |
42711288 |
tccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctctt |
42711387 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtga |
141 |
Q |
| |
|
||||| |||||||| |||||||| |||| |||||||||||||||||| |
|
|
| T |
42711388 |
gatcctttgattcacactcaccctaaacctcttagcaataaaagtga |
42711434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 27045568 - 27045424
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27045568 |
tccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
27045469 |
T |
|
| Q |
101 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27045468 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
27045424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 540278 - 540416
Alignment:
| Q |
7 |
catattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
540278 |
catattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgatt |
540377 |
T |
|
| Q |
107 |
catactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
540378 |
cacactcaccccaaacttcttagcaataaaagtgatgat |
540416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 14223163 - 14223313
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||| ||| ||||||| |
|
|
| T |
14223163 |
tccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctttcctctt |
14223262 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
14223263 |
gatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14223313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16327280 - 16327430
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagta------taaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||| || ||||||||||||||||| || ||||||||||| |
|
|
| T |
16327280 |
tccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcctctt |
16327379 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
16327380 |
gatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
16327430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 9581603 - 9581453
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||||||| ||||| | ||||||||||| ||| |||||| ||||||| || |||||||||||||| |
|
|
| T |
9581603 |
tccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctctt |
9581504 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
9581503 |
gatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9581453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 9729455 - 9729305
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||||||| ||||| | ||||||||||| ||| |||||| ||||||| || |||||||||||||| |
|
|
| T |
9729455 |
tccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctctt |
9729356 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
9729355 |
gatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9729305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 8783608 - 8783752
Alignment:
| Q |
7 |
catattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctcttgatccc |
100 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| ||||| | | ||||||||| ||| |||| ||||||||||||| | ||||||| |||||||| |
|
|
| T |
8783608 |
catatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatccccttgatcca |
8783707 |
T |
|
| Q |
101 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
8783708 |
ttgattcacactcaccccaaacttcctagcaataaaggtgatgat |
8783752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4311428 - 4311279
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |||| | ||||||||||| ||| |||| ||||||||||||| | ||||||||||| |
|
|
| T |
4311428 |
tccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcctctt |
4311329 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||| ||||||||| |||| ||||||||||| ||| |||||| |||||||| |
|
|
| T |
4311328 |
gatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgat |
4311279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22063024 - 22063168
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
100 |
Q |
| |
|
||||| ||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22063024 |
tccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
22063123 |
T |
|
| Q |
101 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22063124 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
22063168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 19587079 - 19587222
Alignment:
| Q |
8 |
atattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctcttgatccct |
101 |
Q |
| |
|
|||||||||||||| |||||| |||||||| ||||| | ||||||||||| ||| |||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
19587079 |
atattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcctctctatcctcttgatccct |
19587178 |
T |
|
| Q |
102 |
tgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
19587179 |
tgattcagactcaccccaaacttcctagcaataaaggtgatgat |
19587222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 29685112 - 29685084
Alignment:
| Q |
117 |
ccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
29685112 |
ccaaacttcttagcaataaaagtgatgat |
29685084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 6813563 - 6813419
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
100 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6813563 |
tccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatccc |
6813464 |
T |
|
| Q |
101 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6813463 |
ttgattcatactcacctcaaacttcttagcaataaaagtgatgat |
6813419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15024404 - 15024254
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||| |||| ||||||||||| | | ||||||||||| |
|
|
| T |
15024404 |
tccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcctctt |
15024305 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15024304 |
gatcccttgattcacactcaccccaaactttctagcaataaaagtgatgat |
15024254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12778017 - 12778170
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| ||||| | ||||||||||| | | |||||| ||||||| || || ||||||||||| |
|
|
| T |
12778017 |
tccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcctctt |
12778116 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgatgtc |
148 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
12778117 |
gatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtc |
12778170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 29462 - 29312
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
29462 |
tccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcctctt |
29363 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29362 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
29312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 20000999 - 20000852
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20000999 |
tccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcctctt |
20000900 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
20000899 |
gatcccttgattcacactcaccccaaa---cttagcaataaaagtgatgat |
20000852 |
T |
|
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Target: scaffold0035 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 52066 - 52216
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagta------taaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||| || ||||||||||||||||| || ||||||||||| |
|
|
| T |
52066 |
tccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcctctt |
52165 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
52166 |
gatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
52216 |
T |
|
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Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 23712220 - 23712370
Alignment:
| Q |
1 |
tccatccatattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctctt |
94 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| ||||| | ||||||||||| ||| |||||| ||||||| || |||||||||||||| |
|
|
| T |
23712220 |
tccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctctt |
23712319 |
T |
|
| Q |
95 |
gatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||||||||| |||||||||||| |
|
|
| T |
23712320 |
gatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgat |
23712370 |
T |
|
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Target: scaffold0485 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 11424 - 11568
Alignment:
| Q |
7 |
catattggtaattgtgagtagggtcatgggttttaaggtatgacaaagtagt------ataaaagtttagataatagttctcatctatcctcttgatccc |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||| | ||||||||||| ||| |||| ||||||||||||| | ||||||||||||||||| |
|
|
| T |
11424 |
catattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatcctcttgatccc |
11523 |
T |
|
| Q |
101 |
ttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
145 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||| |||||||| |
|
|
| T |
11524 |
ttgattcacactcaccccaaactttctagcaataaaggtgatgat |
11568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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