View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0175-Insertion-14 (Length: 936)
Name: NF0175-Insertion-14
Description: NF0175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0175-Insertion-14 |
 | |
|
| [»] chr8 (1 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 871; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 871; E-Value: 0
Query Start/End: Original strand, 8 - 936
Target Start/End: Original strand, 37346865 - 37347808
Alignment:
| Q |
8 |
ccaacaccgtcggcggcggtgaaaaacaaacaacgatcgttgcttccaccgcttcgtcctctttccatcaacaaacgcagcattggagaatggccaagtg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37346865 |
ccaacaccgtcggcggcggtgaaaaacaaacaacgatcgttgcttccaccgcttcgtcctctttccatcaacaaacgcagcattggagaatggccaagtg |
37346964 |
T |
|
| Q |
108 |
ctggatctgacgatctcggtgtttggccagagacaccaagaggaagaggttcaatcactggttcagagtttcagttcacaagagacaggttagctttcta |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37346965 |
ctggatctgacgatctcggtgtttggccagagacaccaagaggaagaggttcaatcactggttcagagtttcagttcacaagagacaggttagctttcta |
37347064 |
T |
|
| Q |
208 |
tgacaaagaatgttccagaatcgctgaacatgtttacctaggaagcgacacagtggcgaagaatcatgaggttttaagaaagaatgggattactcacgtg |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37347065 |
tgacaaagaatgttccagaatcgctgaacatgtttacctaggaagcgacacagtggcgaagaatcatgaggttttaagaaagaatgggattactcacgtg |
37347164 |
T |
|
| Q |
308 |
cttaattgtgttgggtttgtctgtcctgaatatttcaaaagtgaatttgtttataaaactctttggttgcaggatagtccaacagaagatataacaagta |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37347165 |
cttaattgtgttgggtttgtctgtcctgaatatttcaaaagtgaatttgtctataaaactctttggttgcaggatagtccaacagaagatataacaagta |
37347264 |
T |
|
| Q |
408 |
ttttgtatgatgtttttgattattttgaggatgttagattacaaggtggtcgtgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggt |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37347265 |
ttttgtatgatgtttttgattattttgaggatgttagattacaaggtggtcgtgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggt |
37347364 |
T |
|
| Q |
508 |
tattgcttatcttatgtggagagaaggacaaagctttgaagatgcttttcattatgtcaagaatgctcgtggtgttacaaatcctaacatgggttttgct |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37347365 |
tattgcttatcttatgtggagagaaggacaaagctttgaagatgcttttcattatgtcaagaatgctcgtggtgttacaaatcctaacatgggttttgct |
37347464 |
T |
|
| Q |
608 |
tgtcaacttttgcagtgtcagaaaagagtggtaaatgttaatt------------caaatgttaatgctatgccttcaagtcctaattctgttcttagga |
695 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37347465 |
tgtcaacttttgcagtgtcagaaaagagtggtaaatgttaattcaaatgctaatgcaaatgttaatgctatgccttcaagtcctaattctgttcttagga |
37347564 |
T |
|
| Q |
696 |
tgtttagaatggcacctcattcaccttatgatcctcttcatttggtacctaaaatggttaataagccttgtgctaaagagcttgattctcgcggtgcttt |
795 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37347565 |
tgtttagaatggcacctcattcaccttatgatcctcttcatttggtacctaaaatggttaataagccttgtgctaaagagcttgattctcgcggtgcttt |
37347664 |
T |
|
| Q |
796 |
tattgttcatgtaccttctgctatatatgtttggattggtaaaaattgtagttctgttatgtgttgtaatgcacgattggcagctacacaggttg-tcgt |
894 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
37347665 |
tattgttcatgtaccttctgctatatatgtttggattggtaaaaattgtagttctgttatgtgttgtaatgcacgatcggcagctacacaggttgttcgt |
37347764 |
T |
|
| Q |
895 |
tacgagaaagc-aatgct-caattctttgcatttgtgaagatga |
936 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
37347765 |
tacgagaaagcaaatgctccaattctttgcatttgtgaagatga |
37347808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 184; Significance: 4e-99; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 176 - 631
Target Start/End: Original strand, 39219862 - 39220317
Alignment:
| Q |
176 |
tttcagttcacaagagacaggttagctttctatgacaaagaatgttccagaatcgctgaacatgtttacctaggaagcgacacagtggcgaagaatcatg |
275 |
Q |
| |
|
|||||||||| |||||| | |||||||||| ||||||||| ||||| ||||| ||||||||| ||||| | ||||| ||||||||||| || || |||| |
|
|
| T |
39219862 |
tttcagttcaaaagagataaattagctttctttgacaaagagtgttcaagaattgctgaacatatttacttgggaagtgacacagtggccaaaaaccatg |
39219961 |
T |
|
| Q |
276 |
aggttttaagaaagaatgggattactcacgtgcttaattgtgttgggtttgtctgtcctgaatatttcaaaagtgaatttgtttataaaactctttggtt |
375 |
Q |
| |
|
| || | ||| | || || || || || |||||||| |||||||| ||||| ||||| || |||||||||||||| |||| || ||||| |||||||| |
|
|
| T |
39219962 |
aacttctcagagaaaaaggaataacacatgtgcttaactgtgttggttttgtttgtcccgagtatttcaaaagtgattttgagtacaaaacactttggtt |
39220061 |
T |
|
| Q |
376 |
gcaggatagtccaacagaagatataacaagtattttgtatgatgtttttgattattttgaggatgttagattacaaggtggtcgtgttcttgttcattgt |
475 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||| | |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
39220062 |
gcaggacagtccaactgaagatataacaagtattctctatgatgtgtttgattactttgaggatgttagagaacaaggtggtcgtgttcttgttcattgt |
39220161 |
T |
|
| Q |
476 |
tgtcaaggtgtttctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaagatgcttttcattatgtcaagaatgctc |
575 |
Q |
| |
|
|||||||| ||||| ||||||| ||||||| || |||||||| |||||||| | ||||| |||||||||||||||||||| | ||| || | ||| |
|
|
| T |
39220162 |
tgtcaaggggtttcgcgatcaacggctttggtgatagcttatctcatgtggaggaagggacagagctttgaagatgcttttcagtttgttaaaactgcaa |
39220261 |
T |
|
| Q |
576 |
gtggtgttacaaatcctaacatgggttttgcttgtcaacttttgcagtgtcagaaa |
631 |
Q |
| |
|
| || || |||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
39220262 |
ggggagtcacaaatccaaacatgggttttgcttgtcaactcttgcagtgtcagaaa |
39220317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 660 - 844
Target Start/End: Original strand, 39220325 - 39220509
Alignment:
| Q |
660 |
atgctatgccttcaagtcctaattctgttcttaggatgtttagaatggcacctcattcaccttatgatcctcttcatttggtacctaaaatggttaataa |
759 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||| | ||||||| ||||| || |||||||| ||||||||| | || ||||| |||||||| | |
|
|
| T |
39220325 |
atgctatgcctgcaagtcctaattctgttttaaggatgtatcgaatggctcctcactctccttatgaccctcttcatcttgttcctaagatggttaacca |
39220424 |
T |
|
| Q |
760 |
gccttgtgctaaagagcttgattctcgcggtgcttttattgttcatgtaccttctgctatatatgtttggattggtaaaaattgt |
844 |
Q |
| |
|
|| || | || |||||||| || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
39220425 |
accaggttcactagcacttgattcgcgtggtgcttttattgttcatgttccttctgctatctatgtgtggattgggaaaaattgt |
39220509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 450 - 558
Target Start/End: Complemental strand, 45146510 - 45146402
Alignment:
| Q |
450 |
aaggtggtcgtgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaaga |
549 |
Q |
| |
|
|||||| || ||||||||||| ||||| |||||| ||| |||||||||||||| || ||||||||||||||||||||| ||||||| |||||| | || |
|
|
| T |
45146510 |
aaggtgatcttgttcttgttctatgttgacaaggtatttggagatcaacctcttttgtcattgcttatcttatgtggagaaaaggacagagctttaagga |
45146411 |
T |
|
| Q |
550 |
tgcttttca |
558 |
Q |
| |
|
||||||||| |
|
|
| T |
45146410 |
tgcttttca |
45146402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 39219739 - 39219809
Alignment:
| Q |
65 |
cctctttccatcaacaaacgcagcattggagaatggccaagtgctggatctgacgatctcggtgtttggcc |
135 |
Q |
| |
|
|||||||| ||||| ||||| ||| ||| |||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
39219739 |
cctctttcaatcaataaacgtagcgttgaagaatggccaagtgctggatctgatgatcttggtgtttggcc |
39219809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 620 - 716
Target Start/End: Complemental strand, 45146351 - 45146248
Alignment:
| Q |
620 |
cagtgtcagaaaagagtggtaaatgttaatt------caaatgttaatgctatgccttcaagtcctaattctgttcttaggatgtt-tagaatggcacct |
712 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||| ||| | |||||||||||||||||||| |||||| |||||||| ||||||||| ||| |
|
|
| T |
45146351 |
cagtgtcagaaaagagtagtaaatgtaaatttaagtgcaaatgctaaagttatgccttcaagtcctaattatgttctcaggatgttatagaatggctcct |
45146252 |
T |
|
| Q |
713 |
catt |
716 |
Q |
| |
|
|||| |
|
|
| T |
45146251 |
catt |
45146248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 791 - 856
Target Start/End: Complemental strand, 45146185 - 45146121
Alignment:
| Q |
791 |
gcttttattgttcatgtaccttctgctatatatgtttggattggtaaaaattgtagttctgttatg |
856 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
45146185 |
gcttttagtgttcatgtttcttctgctatatatgtttgaatt-ttaaaaattgtagttctgttatg |
45146121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 129; Significance: 3e-66; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 460 - 753
Target Start/End: Original strand, 24153381 - 24153686
Alignment:
| Q |
460 |
tgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaagatgcttttca- |
558 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||||||| ||||||| | | |||||||||||||||| |
|
|
| T |
24153381 |
tgttcttattcattgttgacaaggtgtttctaaatcaaactcttttgtcattgcttatctcatgtggagaaaaggacagacccttgaagatgcttttcaa |
24153480 |
T |
|
| Q |
559 |
--------ttatgtcaagaatgctcgtggtgttacaaatcctaacatgggttttgcttgtcaacttttgcagtgtcagaaaagagtggtaaatgttaatt |
650 |
Q |
| |
|
|||||| ||||||||| | | | |||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||| |||| |
|
|
| T |
24153481 |
tttcaatattatgtgaagaatgcttgcgct---acaaatcctaacatgggttt-gcttgtcaacttttacagtgttagaaaagagtagtaaatgtaaatt |
24153576 |
T |
|
| Q |
651 |
------caaatgttaatgctatgccttcaagtcctaattctgttcttaggatgtt-tagaatggcacctcattcaccttatgatcctcttcatttggtac |
743 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
24153577 |
gaagtgcaaatgctaatgctatgccttcaagtcctaattatgttcttcggatgttatagaatggctcctcattcaccttatgaccctcttcatttggtac |
24153676 |
T |
|
| Q |
744 |
ctaaaatggt |
753 |
Q |
| |
|
|||||||||| |
|
|
| T |
24153677 |
ctaaaatggt |
24153686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 777 - 853
Target Start/End: Original strand, 24153719 - 24153794
Alignment:
| Q |
777 |
ttgattctcgcggtgcttttattgttcatgtaccttctgctatatatgtttggattggtaaaaattgtagttctgtt |
853 |
Q |
| |
|
|||||||||| |||||||||| |||| |||| ||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
24153719 |
ttgattctcgtggtgcttttactgttaatgtttcttctgctatatatgtttggatt-gtaaaatttgtagttctgtt |
24153794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 24904335 - 24904384
Alignment:
| Q |
642 |
atgttaattcaaatgttaatgctatgccttcaagtcctaattctgttctt |
691 |
Q |
| |
|
|||| |||| |||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
24904335 |
atgtaaatttaaatgttaatactatgccttcaagtcctaattatgttctt |
24904384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 118; Significance: 1e-59; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 448 - 753
Target Start/End: Original strand, 26670891 - 26671208
Alignment:
| Q |
448 |
acaaggtggtcgtgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaa |
547 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||| | ||| |||| ||||||||| |||||| |
|
|
| T |
26670891 |
acaaggtggtcttgttcttgttcattgttgacaaggtatttctagatcaacctcttttgtcattgcttatc-tctgtagagaaaaggacaaatatttgaa |
26670989 |
T |
|
| Q |
548 |
gatgcttttc---------attatgtcaagaatgctcgtggtgttacaaatcctaacatgggttttgcttgtcaacttttgc-agtgtcagaaaagagtg |
637 |
Q |
| |
|
|||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||| | |||||||||||||||| |
|
|
| T |
26670990 |
gatgcttttcaatttcaatattatgtgaagaatgctc---gtgttacaaatcctaacatggattttgcttgtcaaattttacaagtgtcagaaaagagtt |
26671086 |
T |
|
| Q |
638 |
gtaaatgttaatt------caaatgttaatgctatgccttcaagtcctaattctgttcttaggatgtt-tagaatggcacctcattcaccttatgatcct |
730 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||||||||| || ||||||| ||||||| || |||||| |||||||||||| ||| ||| |
|
|
| T |
26671087 |
gtaaatgtaaattcaaatgcaaatgttaatgcta-gccttcaagtcctatttatgttcttgggatgttataaaatggctcctcattcacctaatggccct |
26671185 |
T |
|
| Q |
731 |
cttcatttggtacctaaaatggt |
753 |
Q |
| |
|
||| ||||||| ||||||||||| |
|
|
| T |
26671186 |
cttaatttggtgcctaaaatggt |
26671208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 448 - 753
Target Start/End: Original strand, 26673419 - 26673736
Alignment:
| Q |
448 |
acaaggtggtcgtgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaa |
547 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||| | ||| |||| ||||||||| |||||| |
|
|
| T |
26673419 |
acaaggtggtcttgttcttgttcattgttgacaaggtatttctagatcaacctcttttgtcattgcttatc-tctgtagagaaaaggacaaatatttgaa |
26673517 |
T |
|
| Q |
548 |
gatgcttttc---------attatgtcaagaatgctcgtggtgttacaaatcctaacatgggttttgcttgtcaacttttgc-agtgtcagaaaagagtg |
637 |
Q |
| |
|
|||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||| | ||||| |||||||||| |
|
|
| T |
26673518 |
gatgcttttcaatttcaatattatgtgaagaatgctc---gtgttacaaatcctaacatggattttgcttgtcaaattttacaagtgttagaaaagagtt |
26673614 |
T |
|
| Q |
638 |
gtaaatgttaatt------caaatgttaatgctatgccttcaagtcctaattctgttcttaggatgtt-tagaatggcacctcattcaccttatgatcct |
730 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||||||||| || ||||||| ||||||| || |||||| |||||||||||| ||| ||| |
|
|
| T |
26673615 |
gtaaatgtaaattcaaatgcaaatgttaatgcta-gccttcaagtcctatttatgttcttgggatgttataaaatggcccctcattcacctaatggccct |
26673713 |
T |
|
| Q |
731 |
cttcatttggtacctaaaatggt |
753 |
Q |
| |
|
||| ||| ||| ||||||||||| |
|
|
| T |
26673714 |
cttaattgggtgcctaaaatggt |
26673736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 110; Significance: 6e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 448 - 753
Target Start/End: Original strand, 1300236 - 1300553
Alignment:
| Q |
448 |
acaaggtggtcgtgttcttgttcattgttgtcaaggtgtttctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaa |
547 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||| | ||| |||| ||||||||| |||||| |
|
|
| T |
1300236 |
acaaggtggtcttgttcttgttcattgttgacaaggtatttctagatcaacctcttttgtcattgcttatc-tctgtagagaaaaggacaaatatttgaa |
1300334 |
T |
|
| Q |
548 |
gatgcttttc---------attatgtcaagaatgctcgtggtgttacaaatcctaacatgggttttgcttgtcaacttttgc-agtgtcagaaaagagtg |
637 |
Q |
| |
|
|||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||| | ||||| |||||||||| |
|
|
| T |
1300335 |
gatgcttttcaatttcaatattatgtgaagaatgctc---gtgttacaaatcctaacatggattttgcttgtcaaattttacaagtgttagaaaagagtt |
1300431 |
T |
|
| Q |
638 |
gtaaatgttaatt------caaatgttaatgctatgccttcaagtcctaattctgttcttaggatgtt-tagaatggcacctcattcaccttatgatcct |
730 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||||||||| || ||||||| ||||||| || |||||| |||||||||||| ||| ||| |
|
|
| T |
1300432 |
gtaaatgtaaattcaaatgcaaatgttaatgcta-gccttcaagtcctatttatgttcttgggatgttataaaatggcccctcattcacctaatggccct |
1300530 |
T |
|
| Q |
731 |
cttcatttggtacctaaaatggt |
753 |
Q |
| |
|
||| ||| ||| ||||||||||| |
|
|
| T |
1300531 |
cttaattgggtgcctaaaatggt |
1300553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 289 - 558
Target Start/End: Original strand, 7599096 - 7599365
Alignment:
| Q |
289 |
gaatgggattactcacgtgcttaattgtgttgggtttgtctgtcctgaatatttcaaaagtgaatttgtttataaaactctttggttgcaggatagtcca |
388 |
Q |
| |
|
||||||||||||||| || | ||||||||||| ||||| |||||||| ||||| ||| |||| ||||| |||| ||| | ||||| || || ||||| |
|
|
| T |
7599096 |
gaatgggattactcatgttttgaattgtgttggttttgtgtgtcctgagtattttaaaggtgattttgtgtataggactttgtggttacaagacagtcct |
7599195 |
T |
|
| Q |
389 |
acagaagatataacaagtattttgtatgatgtttttgattattttgaggatgttagattacaaggtggtcgtgttcttgttcattgttgtcaaggtgttt |
488 |
Q |
| |
|
| || ||||| || ||||| ||||||||||| |||||||| |||||||||||||| | | ||| | || ||||||||||||||||||| || | |
|
|
| T |
7599196 |
agtgaggatattactagtatattgtatgatgtgtttgattactttgaggatgttagggaaaagaatgggagggtgtttgttcattgttgtcaaggggtgt |
7599295 |
T |
|
| Q |
489 |
ctagatcaacctctttggttattgcttatcttatgtggagagaaggacaaagctttgaagatgcttttca |
558 |
Q |
| |
|
| || || || ||| | ||||||||||||||||||||||| |||||||| || ||||| ||||||||||| |
|
|
| T |
7599296 |
cgaggtcgacgtctcttgttattgcttatcttatgtggagggaaggacagagttttgatgatgcttttca |
7599365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 48621353 - 48621407
Alignment:
| Q |
32 |
aacaaacaacgatcgttgcttccaccgcttcgtcctctttccatcaacaaacgca |
86 |
Q |
| |
|
||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
48621353 |
aacaaacctcgatcattgctttcactgcttcgtcctctttccatcaacaaacgca |
48621407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 642 times since January 2019
Visitors: 2235