View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0178_high_1 (Length: 376)

Name: NF0178_high_1
Description: NF0178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0178_high_1
NF0178_high_1
[»] chr5 (47 HSPs)
chr5 (189-295)||(4789521-4789627)
chr5 (188-268)||(6804891-6804971)
chr5 (188-254)||(35262452-35262518)
chr5 (189-257)||(26712367-26712435)
chr5 (189-257)||(26982105-26982173)
chr5 (188-251)||(4790203-4790265)
chr5 (188-254)||(9923388-9923454)
chr5 (188-292)||(4554657-4554761)
chr5 (188-256)||(32943517-32943585)
chr5 (188-256)||(42650757-42650825)
chr5 (188-259)||(6803948-6804019)
chr5 (195-237)||(1970513-1970555)
chr5 (187-237)||(12201376-12201426)
chr5 (195-240)||(9142054-9142099)
chr5 (188-236)||(16689593-16689641)
chr5 (195-254)||(6804815-6804874)
chr5 (188-254)||(1969779-1969845)
chr5 (104-154)||(1970514-1970564)
chr5 (186-268)||(4555357-4555439)
chr5 (188-238)||(4555458-4555508)
chr5 (195-237)||(4607135-4607177)
chr5 (188-234)||(4820454-4820500)
chr5 (89-151)||(6804818-6804880)
chr5 (202-260)||(8204134-8204192)
chr5 (185-258)||(12330145-12330218)
chr5 (202-260)||(15183993-15184051)
chr5 (187-237)||(21771273-21771323)
chr5 (187-276)||(26711567-26711657)
chr5 (91-145)||(26712375-26712429)
chr5 (187-276)||(26981304-26981394)
chr5 (91-145)||(26982113-26982167)
chr5 (188-238)||(32944482-32944532)
chr5 (202-260)||(33002792-33002850)
chr5 (194-258)||(3595783-3595847)
chr5 (104-145)||(4789527-4789568)
chr5 (188-237)||(5747921-5747970)
chr5 (188-237)||(6007653-6007702)
chr5 (89-122)||(6353714-6353747)
chr5 (194-258)||(7858333-7858397)
chr5 (194-258)||(8321365-8321429)
chr5 (194-258)||(12330640-12330704)
chr5 (19-72)||(32944399-32944452)
chr5 (188-237)||(36912246-36912294)
chr5 (197-234)||(42651581-42651618)
chr5 (89-145)||(4555445-4555501)
chr5 (185-237)||(9924123-9924174)
chr5 (89-145)||(16689600-16689656)
[»] chr8 (32 HSPs)
chr8 (24-145)||(37562302-37562423)
chr8 (24-152)||(13934973-13935101)
chr8 (188-295)||(27321599-27321706)
chr8 (188-251)||(27322572-27322635)
chr8 (89-152)||(37563017-37563080)
chr8 (202-292)||(43924504-43924594)
chr8 (188-260)||(35943076-35943148)
chr8 (188-246)||(35840520-35840578)
chr8 (202-292)||(43924962-43925052)
chr8 (187-260)||(35943815-35943888)
chr8 (188-260)||(40450962-40451034)
chr8 (188-255)||(37562295-37562362)
chr8 (188-254)||(42346087-42346153)
chr8 (182-254)||(7054084-7054156)
chr8 (195-254)||(42345401-42345460)
chr8 (188-246)||(35839722-35839780)
chr8 (218-291)||(33802318-33802391)
chr8 (188-268)||(43972054-43972134)
chr8 (188-258)||(14197659-14197729)
chr8 (188-254)||(6012969-6013034)
chr8 (202-292)||(12349981-12350071)
chr8 (202-292)||(12350598-12350688)
chr8 (202-260)||(34992240-34992298)
chr8 (222-292)||(38686337-38686407)
chr8 (202-268)||(41859324-41859390)
chr8 (90-152)||(44751608-44751670)
chr8 (224-269)||(10501879-10501924)
chr8 (218-291)||(38687000-38687073)
chr8 (104-153)||(42345393-42345442)
chr8 (187-268)||(43971277-43971358)
chr8 (195-255)||(13935034-13935094)
chr8 (212-268)||(32536732-32536788)
[»] chr3 (38 HSPs)
chr3 (24-145)||(51421595-51421716)
chr3 (24-152)||(51420861-51420989)
chr3 (188-268)||(33968181-33968261)
chr3 (187-257)||(45297548-45297618)
chr3 (188-256)||(49161788-49161856)
chr3 (202-292)||(38337421-38337511)
chr3 (188-237)||(33455780-33455829)
chr3 (188-236)||(51421675-51421723)
chr3 (188-235)||(49160987-49161034)
chr3 (188-254)||(43768741-43768807)
chr3 (193-267)||(45501263-45501337)
chr3 (188-236)||(8652810-8652858)
chr3 (188-260)||(8653696-8653768)
chr3 (195-254)||(43768033-43768091)
chr3 (202-268)||(38336958-38337024)
chr3 (188-237)||(33454866-33454915)
chr3 (188-237)||(44021286-44021334)
chr3 (187-258)||(930411-930482)
chr3 (195-255)||(51420868-51420928)
chr3 (188-256)||(55124414-55124482)
chr3 (188-258)||(11442133-11442203)
chr3 (188-258)||(32474440-32474510)
chr3 (188-258)||(43521077-43521147)
chr3 (222-268)||(15450259-15450305)
chr3 (194-259)||(20586078-20586143)
chr3 (218-258)||(929940-929981)
chr3 (194-258)||(5113204-5113268)
chr3 (188-237)||(8439483-8439532)
chr3 (194-258)||(20586562-20586626)
chr3 (194-258)||(26006152-26006216)
chr3 (104-145)||(33455781-33455822)
chr3 (104-153)||(43768025-43768074)
chr3 (195-260)||(44406935-44407000)
chr3 (89-158)||(44406944-44407013)
chr3 (80-145)||(45297556-45297621)
chr3 (188-237)||(53714415-53714464)
chr3 (112-152)||(26836346-26836386)
chr3 (34-79)||(49287770-49287817)
[»] chr1 (53 HSPs)
chr1 (24-153)||(38932048-38932177)
chr1 (24-145)||(38931321-38931442)
chr1 (186-268)||(4641730-4641812)
chr1 (188-259)||(4640528-4640599)
chr1 (187-268)||(31788244-31788325)
chr1 (188-276)||(41884189-41884277)
chr1 (188-237)||(48835096-48835145)
chr1 (188-236)||(38931314-38931362)
chr1 (185-292)||(14924671-14924778)
chr1 (193-236)||(30466187-30466230)
chr1 (185-268)||(31787475-31787558)
chr1 (188-246)||(2687717-2687775)
chr1 (188-237)||(47334199-47334248)
chr1 (204-292)||(11469097-11469185)
chr1 (188-240)||(50950891-50950943)
chr1 (195-254)||(11031438-11031497)
chr1 (213-292)||(14925286-14925365)
chr1 (187-258)||(45923109-45923180)
chr1 (188-260)||(27420268-27420341)
chr1 (188-237)||(45922232-45922281)
chr1 (188-276)||(46134576-46134665)
chr1 (188-260)||(27418164-27418235)
chr1 (195-259)||(29334221-29334285)
chr1 (188-236)||(30780984-30781032)
chr1 (195-255)||(38932109-38932169)
chr1 (194-269)||(41882174-41882249)
chr1 (104-152)||(47334900-47334948)
chr1 (188-235)||(294625-294672)
chr1 (188-259)||(6766974-6767045)
chr1 (195-254)||(11032201-11032260)
chr1 (188-258)||(28371681-28371751)
chr1 (89-152)||(29334214-29334277)
chr1 (188-235)||(34716424-34716471)
chr1 (89-152)||(40028767-40028830)
chr1 (188-259)||(49420084-49420155)
chr1 (186-237)||(50428145-50428196)
chr1 (202-260)||(16270221-16270279)
chr1 (202-260)||(23440841-23440899)
chr1 (188-254)||(42383720-42383785)
chr1 (90-152)||(43316357-43316419)
chr1 (188-234)||(43317118-43317164)
chr1 (195-237)||(47334899-47334941)
chr1 (202-268)||(51974451-51974517)
chr1 (218-258)||(2820987-2821028)
chr1 (218-258)||(2821467-2821508)
chr1 (218-258)||(12800448-12800489)
chr1 (195-236)||(36272547-36272588)
chr1 (188-237)||(36385668-36385717)
chr1 (195-236)||(43316364-43316405)
chr1 (194-258)||(43755855-43755919)
chr1 (204-260)||(9948863-9948919)
chr1 (188-240)||(17151002-17151053)
chr1 (189-237)||(40648916-40648964)
[»] chr7 (47 HSPs)
chr7 (188-260)||(42607081-42607153)
chr7 (188-254)||(24995852-24995918)
chr7 (194-268)||(24996651-24996725)
chr7 (194-260)||(40257778-40257844)
chr7 (188-237)||(29060738-29060787)
chr7 (188-257)||(40320389-40320458)
chr7 (188-256)||(32871120-32871188)
chr7 (192-292)||(46757428-46757528)
chr7 (201-254)||(27599224-27599277)
chr7 (186-235)||(36844610-36844659)
chr7 (188-260)||(6730134-6730205)
chr7 (188-256)||(12732247-12732315)
chr7 (188-260)||(40257580-40257652)
chr7 (188-260)||(42607789-42607860)
chr7 (187-260)||(6729397-6729470)
chr7 (201-238)||(27600093-27600130)
chr7 (195-268)||(46759230-46759303)
chr7 (105-152)||(46759263-46759310)
chr7 (202-268)||(668193-668259)
chr7 (188-266)||(32548643-32548721)
chr7 (188-254)||(36845184-36845250)
chr7 (188-237)||(43846915-43846963)
chr7 (188-229)||(44540988-44541029)
chr7 (188-236)||(5064645-5064693)
chr7 (195-230)||(9122657-9122692)
chr7 (89-152)||(27599211-27599274)
chr7 (188-235)||(35771260-35771307)
chr7 (202-260)||(17145636-17145694)
chr7 (194-259)||(25137418-25137483)
chr7 (192-266)||(32547707-32547781)
chr7 (202-260)||(37468981-37469039)
chr7 (202-260)||(38779539-38779597)
chr7 (188-234)||(40319606-40319652)
chr7 (218-258)||(4180316-4180357)
chr7 (104-145)||(5064645-5064686)
chr7 (218-258)||(20560259-20560300)
chr7 (104-145)||(24996683-24996724)
chr7 (104-145)||(32871140-32871181)
chr7 (218-258)||(33140272-33140313)
chr7 (202-251)||(41194527-41194576)
chr7 (104-145)||(42607812-42607853)
chr7 (218-258)||(42901114-42901155)
chr7 (195-236)||(44541708-44541749)
chr7 (116-152)||(9122650-9122686)
chr7 (188-228)||(9123485-9123525)
chr7 (104-152)||(27600095-27600143)
chr7 (34-79)||(35770357-35770404)
[»] chr2 (51 HSPs)
chr2 (188-260)||(36390957-36391029)
chr2 (188-254)||(34617653-34617719)
chr2 (185-273)||(2307036-2307124)
chr2 (188-259)||(7868118-7868189)
chr2 (188-235)||(23876064-23876111)
chr2 (181-256)||(6084864-6084939)
chr2 (188-235)||(6085702-6085749)
chr2 (193-256)||(15602800-15602863)
chr2 (193-256)||(23875245-23875308)
chr2 (188-254)||(20992001-20992067)
chr2 (204-269)||(4058983-4059048)
chr2 (92-152)||(7868129-7868189)
chr2 (89-145)||(36390964-36391020)
chr2 (105-152)||(5005462-5005509)
chr2 (86-145)||(36391654-36391713)
chr2 (193-236)||(36391672-36391715)
chr2 (188-254)||(10670924-10670990)
chr2 (202-268)||(21471031-21471097)
chr2 (188-237)||(24383061-24383111)
chr2 (204-254)||(37545692-37545742)
chr2 (194-268)||(41519893-41519967)
chr2 (181-251)||(44094802-44094872)
chr2 (206-259)||(36476723-36476776)
chr2 (201-238)||(37546562-37546599)
chr2 (104-153)||(37546564-37546613)
chr2 (188-268)||(4975696-4975776)
chr2 (188-268)||(4976473-4976553)
chr2 (188-268)||(4994380-4994460)
chr2 (195-235)||(5005469-5005509)
chr2 (89-153)||(41768728-41768792)
chr2 (188-235)||(8145386-8145433)
chr2 (195-254)||(20991294-20991353)
chr2 (86-153)||(36719004-36719071)
chr2 (195-254)||(41768725-41768784)
chr2 (202-260)||(4479678-4479736)
chr2 (202-260)||(14573275-14573333)
chr2 (195-265)||(42370921-42370991)
chr2 (218-258)||(3705366-3705407)
chr2 (222-291)||(8536171-8536240)
chr2 (194-258)||(16903875-16903939)
chr2 (194-258)||(30899396-30899460)
chr2 (188-237)||(38740444-38740492)
chr2 (34-79)||(4386126-4386173)
chr2 (104-152)||(4769052-4769100)
chr2 (104-144)||(5850210-5850250)
chr2 (194-254)||(8146637-8146697)
chr2 (187-258)||(16681565-16681636)
chr2 (202-254)||(30545417-30545469)
chr2 (188-240)||(34924798-34924850)
chr2 (105-153)||(36476747-36476795)
chr2 (188-292)||(42369643-42369747)
[»] chr4 (72 HSPs)
chr4 (188-237)||(25970106-25970155)
chr4 (188-268)||(34155594-34155674)
chr4 (188-267)||(23383310-23383389)
chr4 (188-267)||(41261122-41261201)
chr4 (188-254)||(232031-232097)
chr4 (188-257)||(33370854-33370923)
chr4 (188-237)||(39429936-39429985)
chr4 (202-292)||(10421525-10421615)
chr4 (195-237)||(36450735-36450777)
chr4 (202-240)||(47377594-47377632)
chr4 (202-291)||(6246798-6246887)
chr4 (201-254)||(30808634-30808687)
chr4 (201-254)||(34371475-34371528)
chr4 (218-291)||(53664242-53664315)
chr4 (189-237)||(36451426-36451474)
chr4 (194-268)||(22499942-22500016)
chr4 (187-237)||(47326788-47326838)
chr4 (187-237)||(47341584-47341634)
chr4 (218-292)||(50710361-50710435)
chr4 (89-154)||(232034-232099)
chr4 (189-254)||(6680324-6680389)
chr4 (188-241)||(38009284-38009337)
chr4 (188-237)||(41261889-41261938)
chr4 (201-238)||(45330578-45330615)
chr4 (205-254)||(45331435-45331484)
chr4 (202-279)||(47376866-47376943)
chr4 (188-276)||(54006728-54006817)
chr4 (195-240)||(55514350-55514395)
chr4 (188-236)||(231436-231484)
chr4 (188-256)||(7987408-7987476)
chr4 (78-150)||(17049680-17049752)
chr4 (188-268)||(22499098-22499178)
chr4 (188-256)||(33369909-33369977)
chr4 (188-236)||(34154794-34154842)
chr4 (188-240)||(54453095-54453147)
chr4 (185-259)||(12590179-12590254)
chr4 (188-258)||(19860330-19860400)
chr4 (195-254)||(23425189-23425248)
chr4 (186-237)||(37638670-37638721)
chr4 (195-254)||(39429232-39429291)
chr4 (202-259)||(3847900-3847958)
chr4 (202-260)||(11417701-11417759)
chr4 (202-260)||(11417913-11417971)
chr4 (202-259)||(11680290-11680348)
chr4 (202-259)||(11688569-11688627)
chr4 (202-292)||(15481049-15481139)
chr4 (188-254)||(22061330-22061396)
chr4 (195-237)||(25970802-25970844)
chr4 (202-260)||(26611259-26611317)
chr4 (19-145)||(33370790-33370916)
chr4 (188-254)||(38010830-38010896)
chr4 (195-237)||(39652058-39652100)
chr4 (206-260)||(45235936-45235990)
chr4 (106-152)||(47523219-47523265)
chr4 (219-293)||(50656988-50657062)
chr4 (194-258)||(5235380-5235444)
chr4 (194-258)||(20174976-20175040)
chr4 (188-229)||(20351318-20351359)
chr4 (188-229)||(22062233-22062274)
chr4 (202-267)||(25370520-25370585)
chr4 (104-145)||(25970113-25970154)
chr4 (201-238)||(30809503-30809540)
chr4 (188-237)||(31807101-31807150)
chr4 (188-237)||(36013951-36014000)
chr4 (104-153)||(36450727-36450776)
chr4 (188-276)||(54008413-54008502)
chr4 (224-268)||(2093880-2093924)
chr4 (188-236)||(17512206-17512254)
chr4 (188-259)||(25655615-25655687)
chr4 (89-153)||(30808620-30808684)
chr4 (194-254)||(34372261-34372321)
chr4 (104-152)||(47376852-47376900)
[»] chr6 (27 HSPs)
chr6 (186-257)||(25371167-25371238)
chr6 (185-238)||(29290120-29290173)
chr6 (188-268)||(34035012-34035092)
chr6 (188-259)||(25067827-25067898)
chr6 (188-230)||(8384024-8384066)
chr6 (202-240)||(24125986-24126024)
chr6 (194-268)||(34034174-34034248)
chr6 (188-258)||(28975340-28975410)
chr6 (188-237)||(16764925-16764974)
chr6 (202-279)||(24126675-24126752)
chr6 (186-237)||(16766014-16766065)
chr6 (188-258)||(28983270-28983340)
chr6 (188-258)||(34717733-34717803)
chr6 (202-260)||(3543039-3543097)
chr6 (202-260)||(22582455-22582513)
chr6 (202-260)||(22587286-22587344)
chr6 (202-260)||(33018392-33018450)
chr6 (202-260)||(33479710-33479768)
chr6 (202-260)||(33480604-33480662)
chr6 (194-258)||(7635130-7635194)
chr6 (103-152)||(9574570-9574619)
chr6 (194-258)||(18290473-18290537)
chr6 (214-259)||(21982534-21982579)
chr6 (194-251)||(23593121-23593178)
chr6 (104-153)||(24126718-24126767)
chr6 (188-259)||(10608296-10608368)
chr6 (188-259)||(34717242-34717313)
[»] scaffold2003 (2 HSPs)
scaffold2003 (188-259)||(508-579)
scaffold2003 (92-152)||(519-579)
[»] scaffold0189 (2 HSPs)
scaffold0189 (213-292)||(12803-12882)
scaffold0189 (202-291)||(12198-12287)
[»] scaffold0129 (2 HSPs)
scaffold0129 (188-251)||(43203-43266)
scaffold0129 (86-145)||(43200-43259)
[»] scaffold0150 (2 HSPs)
scaffold0150 (188-230)||(14012-14054)
scaffold0150 (116-153)||(14011-14048)
[»] scaffold0071 (1 HSPs)
scaffold0071 (222-268)||(11886-11932)
[»] scaffold0508 (1 HSPs)
scaffold0508 (194-258)||(4139-4203)
[»] scaffold0022 (1 HSPs)
scaffold0022 (194-258)||(61580-61644)


Alignment Details
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 4789521 - 4789627
Alignment:
Q  189 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctca 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4789521 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctca 4789620  T
Q  289 acacaag 295  Q
    |||||||    
T  4789621 acacaag 4789627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 6804891 - 6804971
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||  || |||||||| |||||||||| |||||||    
T  6804891 ggtggggtttagcatgggaaagaggagttgtttcccaccatggaaaagtactttttgaccatcagatcaaatgaagaacat 6804971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 35262452 - 35262518
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||| |||||||||||||||||  | |||||||| ||||||||||||||||| |||||||||||||    
T  35262452 ggtggagtttagcatgggaaaggataattgtttcctaccatgggaaagttatttttgaccattagat 35262518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 26712435 - 26712367
Alignment:
Q  189 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaa 257  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| || | || ||||| |||||||    
T  26712435 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaa 26712367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 26982173 - 26982105
Alignment:
Q  189 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaa 257  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| || | || ||||| |||||||    
T  26982173 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaa 26982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 4790265 - 4790203
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccatta 251  Q
    |||||||||||| ||||||||| || ||||||||||| ||||||||||||||| ||||||||||    
T  4790265 ggtggggtttaggatgggaaagagg-gttgtttcccatcatgggaaagttatttttgaccatta 4790203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 9923388 - 9923454
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||| || |  ||||||||||    
T  9923388 ggtggggtttagcatgggaatggagagttgtttcccaccatggaaaagtttttttcaaccattagat 9923454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 292
Target Start/End: Original strand, 4554657 - 4554761
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctc 287  Q
    |||||||||||| ||||||||||  | |||||| |||||||| ||||| || | ||||||||||||| || | ||||||||  |||||| ||| || |||    
T  4554657 ggtggggtttagtatgggaaaggaaaattgttttccaccatgagaaagctaattttgaccattagataaagtagagaacatacttttatcatagacactc 4554756  T
Q  288 aacac 292  Q
    |||||    
T  4554757 aacac 4554761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 32943517 - 32943585
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||| ||||||||||||||||  | |||||||||||||||||||||||| | ||  |||||||||||    
T  32943517 ggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagttaatgttagccattagatca 32943585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 42650757 - 42650825
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||  ||| ||||||||||    
T  42650757 ggtgaggtttagcatgggaaaggggaattgtttttcaccatgggaaagttttttatgagcattagatca 42650825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 6803948 - 6804019
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    |||||||||||| ||||||||||| |||||||||| ||||| ||||| || || ||| ||||| ||||||||    
T  6803948 ggtggggtttagtatgggaaagggaagttgtttcctaccataggaaatttctttttgtccattggatcaaat 6804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 1970555 - 1970513
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  1970555 tttagcatgggaatggagagttgtttcccaccatgggaaagtt 1970513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 12201376 - 12201426
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||| |||||||||| ||||||||||| |||||| |||||||    
T  12201376 gggtggggtttagtatgggaaaggagagttgtttcctaccatgagaaagtt 12201426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 9142054 - 9142099
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  9142054 tttagtatgggaaagggaagttgtttcccaccatgggaaagctatt 9142099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 16689593 - 16689641
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||| ||||||||||| |||| ||||||||||||| |||||    
T  16689593 ggtggggtttagtatgggaaagggaagttctttcccaccatggaaaagt 16689641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 6804874 - 6804815
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||  || | |||||||||||||||||||||||| | | |||||||||||||    
T  6804874 tttagcatgggtcagtgaagttgtttcccaccatgggaaagtcaattttgaccattagat 6804815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 1969779 - 1969845
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||||||||||| || |||||||||   |||||||||||||| || |  ||||||||||    
T  1969779 ggtggggtttagcatgggaatggagagttgttttttaccatgggaaagtttttttcaaccattagat 1969845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 1970514 - 1970564
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccaccaa 154  Q
    ||||||| ||| ||||||| ||||| || ||||||||||||||||||||||    
T  1970514 actttcccatggtgggaaacaactctccattcccatgctaaatgccaccaa 1970564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 4555439 - 4555357
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||||  ||||| ||||||||||| |||||||||| |||||||||||| || | |||| | || ||| || ||||||||||    
T  4555439 agggtggcatttagtatgggaaagggaagttgtttcctaccatgggaaagctaattttgaacgttggataaagtggagaacat 4555357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 4555508 - 4555458
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    ||||||||||||||||||||| || |||| ||||||| |||| ||||||||    
T  4555508 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtta 4555458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 4607177 - 4607135
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||| || |||||||||||||||||| |||||||    
T  4607177 tttagcatgggaatggagagttgtttcccaccatgagaaagtt 4607135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 4820454 - 4820500
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaa 234  Q
    ||||||||||| |||||||||||| | |||||| |||||||||||||    
T  4820454 ggtggggtttaacatgggaaagggaaattgttttccaccatgggaaa 4820500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 6804818 - 6804880
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccac 151  Q
    ||||||| |||||||||||||| ||| ||||||| |||| | ||  |||||||||||||||||    
T  6804818 taatggtcaaaattgactttcccatggtgggaaacaacttcactgacccatgctaaatgccac 6804880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 8204134 - 8204192
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  8204134 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 8204192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 12330145 - 12330218
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt-attcttgaccattagatcaaa 258  Q
    |||||||  |||||||||||||||||  | || |||||||||||||||||||| ||| || ||||||||||||||    
T  12330145 tagggtgaagtttagcatgggaaaggctaatt-tttcccaccatgggaaagttaatttttaaccattagatcaaa 12330218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 15184051 - 15183993
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  15184051 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 15183993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 21771323 - 21771273
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||   ||||| |||||| ||||||||||||    
T  21771323 gggtggggtttagcatgggaaagaccagttgcttcccatcatgggaaagtt 21771273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 26711567 - 26711657
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt-tattcttgaccattagatcaaatggagaacatgattttat 276  Q
    ||||||||||||| ||||||||||  |||||||||||| ||| |||||||  ||| | ||||| |||||||| | |||||||  |||||||    
T  26711567 gggtggggtttagtatgggaaaggaaagttgtttcccaacataggaaagtaaattttagaccactagatcaattagagaacacaattttat 26711657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 26712375 - 26712429
Alignment:
Q  91 atggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||||  |||||| ||| ||||||| |||| |||||||||||||||||    
T  26712375 atggttaaaattagctttcccatggtgggaaacaacttccctttcccatgctaaa 26712429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 26981304 - 26981394
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt-tattcttgaccattagatcaaatggagaacatgattttat 276  Q
    ||||||||||||| ||||||||||  |||||||||||| ||| |||||||  ||| | ||||| |||||||| | |||||||  |||||||    
T  26981304 gggtggggtttagtatgggaaaggaaagttgtttcccaacataggaaagtaaattttagaccactagatcaattagagaacacaattttat 26981394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 26982113 - 26982167
Alignment:
Q  91 atggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||||  |||||| ||| ||||||| |||| |||||||||||||||||    
T  26982113 atggttaaaattagctttcccatggtgggaaacaacttccctttcccatgctaaa 26982167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 32944532 - 32944482
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    ||||||||||||||||||||| |  | |||||||||||||||| |||||||    
T  32944532 ggtggggtttagcatgggaaatgatacttgtttcccaccatggaaaagtta 32944482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 33002850 - 33002792
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  33002850 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 33002792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 3595783 - 3595847
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  3595783 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 3595847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 4789568 - 4789527
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||    
T  4789568 actttcccatggtgggaaacaactcccctttcccatgctaaa 4789527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 5747921 - 5747970
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||| ||||||||| |||||| ||||||  ||||||||||||    
T  5747921 ggtggggtttagtatgggaaagaggagttctttcccttcatgggaaagtt 5747970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 6007702 - 6007653
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||| ||||||||||| | ||||||||||  |||||||||||    
T  6007702 ggtggggtttagaatgggaaagggaatttgtttcccatgatgggaaagtt 6007653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 6353747 - 6353714
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaa 122  Q
    |||||||||||||| |||||||||||||||||||    
T  6353747 taatggttaaaatttactttcctatgatgggaaa 6353714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 7858333 - 7858397
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  7858333 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 7858397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 8321429 - 8321365
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  8321429 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 8321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 12330704 - 12330640
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  12330704 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 12330640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 32944399 - 32944452
Alignment:
Q  19 ggagcagagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtat 72  Q
    |||| ||||| ||||||||||||||||||||| ||| | |||||||| ||||||    
T  32944399 ggaggagagatggtagtggaagatagtgacaataatctagtgttgagggtgtat 32944452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 36912246 - 36912294
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||  | || ||||||||||||||||||||    
T  36912246 ggtggggtttagcatgggaaaggcta-ttttttcccaccatgggaaagtt 36912294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 42651618 - 42651581
Alignment:
Q  197 tagcatgggaaaggggagttgtttcccaccatgggaaa 234  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  42651618 tagcatgggaaagggaagttgtttcccaccataggaaa 42651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 4555445 - 4555501
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    |||||| ||| ||| ||||||  |||||||||||||||| || ||||||||||||||    
T  4555445 taatggctaacattaactttcacatgatgggaaagaacttccatttcccatgctaaa 4555501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 9924174 - 9924123
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||  ||||||||||||  || ||||||||||||||||||||||||||    
T  9924174 tagggtggcatttagcatgggat-ggagagttgtttcccaccatgggaaagtt 9924123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 16689656 - 16689600
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    |||| ||||||||| ||||| | ||| |||||||||||| ||||||||||| |||||    
T  16689656 taatagttaaaatttacttttccatggtgggaaagaacttccctttcccatactaaa 16689600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 37562423 - 37562302
Alignment:
Q  24 agagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgggaaag 123  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||     
T  37562423 agagatggtagtggaagatagtgacaaaaatatagtgttgagagtgtatgataagattgtagatctaatggttaaaattgactttcctatggtgggaaac 37562324  T
Q  124 aactcccctttcccatgctaaa 145  Q
    || || ||||||||||||||||    
T  37562323 aattctcctttcccatgctaaa 37562302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 13934973 - 13935101
Alignment:
Q  24 agagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgggaaag 123  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| |||     
T  13934973 agagatggtagtggaagatagtgacaaaaatatagtgttgagagtgtatgacaagattgtagatctaatggttaaaagtgactttcctatggtggaaaac 13935072  T
Q  124 aactcccctttcccatgctaaatgccacc 152  Q
    ||||  |||||||||||||||||||||||    
T  13935073 aactttcctttcccatgctaaatgccacc 13935101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 27321599 - 27321706
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctc 287  Q
    |||||||||||||||||||||   ||||||||||||||||||  ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  27321599 ggtggggtttagcatgggaaataagagttgtttcccaccatgaaaaagttattattgatcattagattaaatggagaacatgattttattataaaccctc 27321698  T
Q  288 aacacaag 295  Q
    ||||||||    
T  27321699 aacacaag 27321706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 27322635 - 27322572
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccatta 251  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  27322635 ggtggggtttaggatgggaaatgggagttgtttcccacgatgggaaagttattcttgaccatta 27322572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 37563017 - 37563080
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||    
T  37563017 taatggttaaaattgactttcctatgatgagaaacaactcttctttcccatgctaaatgccacc 37563080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 43924504 - 43924594
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||| ||||||||||||||||||||||| || | |||||| |||||| |||| ||||||||  |||||| |||||| ||||||||    
T  43924504 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcataaacactcaacac 43924594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 35943076 - 35943148
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||| |||||  ||||||||    
T  35943076 ggtggggtttagcatgggaaagggaagttgtttcccaccatggggaagttttttttgtccattgaatcaaatg 35943148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 35840578 - 35840520
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgac 246  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| || |||||    
T  35840578 ggtggggtttagcatgggaaagggaagttgtttcccacgatgggaaagttttttttgac 35840520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 43925052 - 43924962
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||| ||||||||||||||||| |||||||| | |||||| |||||| |||| ||||||||  |||||| ||| || ||||||||    
T  43925052 tgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacac 43924962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 35943888 - 35943815
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||||||||||||||| || ||||||||||| |||| |||||| |||||| || || |||||||||    
T  35943888 gggtggggtttagcatgggaaaggagaattgtttcccactatggaaaagtttttcttgtcccttggatcaaatg 35943815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 40451034 - 40450962
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||| |||||||| |  |||||||||||||||||||||||| | | || ||||||||||||||||    
T  40451034 ggtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaatg 40450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 37562295 - 37562362
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatc 255  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||| | | || |||||||||||    
T  37562295 ggtggggtttagcatgggaaaggagaattgtttcccaccataggaaagtcaattttaaccattagatc 37562362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 42346153 - 42346087
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||| || |  ||||||||||    
T  42346153 ggtggggtttagcatgggaatggagagttgtttcccatcatgggaaagtttttttcaaccattagat 42346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 7054084 - 7054156
Alignment:
Q  182 atatagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||  ||||||||||||| || ||||||||||||||||||| |||||| || |  ||||||||||    
T  7054084 atatagggtggcatttagcatgggaatggagagttgtttcccaccatggaaaagtttttttcaaccattagat 7054156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 42345401 - 42345460
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||| || |||||||||||||||||||||||||| || |  ||||||||||    
T  42345401 tttagcatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccattagat 42345460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 35839722 - 35839780
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgac 246  Q
    |||||||||||||||||||||||| ||||||||||||  ||| ||||||| || |||||    
T  35839722 ggtggggtttagcatgggaaagggaagttgtttcccatgatgagaaagttttttttgac 35839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 33802391 - 33802318
Alignment:
Q  218 tttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    ||||||||||||||||||| | | |||||||||| || |||| ||||||||| |||||| ||| || |||||||    
T  33802391 tttcccaccatgggaaagtaaatattgaccattaaataaaatagagaacatggttttatcatagacactcaaca 33802318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 43972134 - 43972054
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||| ||||||| ||| ||| | | ||||||||||||| |||||||||||| | || |||||||||| |||| ||||||||    
T  43972134 ggtgaggtttagtatgagaatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacat 43972054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 14197659 - 14197729
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  14197659 ggtgaggtttagcatgggaaagtt-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 14197729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 6012969 - 6013034
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||||||| ||| || |||| |||||||||||||| |||| | |||| ||||||||||    
T  6012969 ggtggggtttagcatggaaaaaggaagttctttcccaccatggg-aagtaaatctttaccattagat 6013034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 12349981 - 12350071
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||| |||||||||||||||||| |||  || | || |||||||||| || |  |||||||| |||||| ||| || ||||||||    
T  12349981 tgggaaagggaagttgtttcccaccatggaaaaactaattttaaccattagataaagtaaagaacatgcttttatcatagacactcaacac 12350071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 12350688 - 12350598
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||| | ||||||||||||||||||||  || | ||||||||||||| |  | ||||||||  |||||| ||| || ||||||||    
T  12350688 tgggaaagggaaattgtttcccaccatgggaaacctaattttgaccattagataaggtagagaacatacttttatcatagacactcaacac 12350598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 34992298 - 34992240
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  34992298 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatg 34992240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 38686337 - 38686407
Alignment:
Q  222 ccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    ||||||||||||||| | | ||||||||||||| || | ||||||||| |||||| ||| || ||||||||    
T  38686337 ccaccatgggaaagtaaatattgaccattagataaagtagagaacatggttttatcatagacactcaacac 38686407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 41859324 - 41859390
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||| ||||| ||||||||||||||||||||  || || || |||||| ||||| |||||||    
T  41859324 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacat 41859390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 44751670 - 44751608
Alignment:
Q  90 aatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    |||| ||||||  |||||||| |||||||||||||| || ||||||||| | |||||||||||    
T  44751670 aatgattaaaaaagactttcccatgatgggaaagaagtctcctttcccaagttaaatgccacc 44751608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 10501924 - 10501879
Alignment:
Q  224 accatgggaaagttattcttgaccattagatcaaatggagaacatg 269  Q
    ||||||||||||| ||| ||||||||| ||||||||| ||||||||    
T  10501924 accatgggaaagtaatttttgaccattggatcaaatgaagaacatg 10501879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 38687073 - 38687000
Alignment:
Q  218 tttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    |||||||| |||||||||| | | |||| |||||||| || | |||||||||||||||| ||| || |||||||    
T  38687073 tttcccacaatgggaaagtaaatattgatcattagataaagtagagaacatgattttatcatagacactcaaca 38687000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 42345442 - 42345393
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||| ||||||| ||||| || |||||||||||||||||||||    
T  42345442 actttcccatggtgggaaacaactctccattcccatgctaaatgccacca 42345393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 43971277 - 43971358
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||| |||||| |||| || | | ||||||||||||||||||||||| || | |||||||||| || || | ||||||||    
T  43971277 gggtggcgtttagtatggaaatgagaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacat 43971358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 13935094 - 13935034
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatc 255  Q
    ||||||||||||||||  |||||||| ||||||| ||||||| | | || |||||||||||    
T  13935094 tttagcatgggaaaggaaagttgttttccaccataggaaagtcacttttaaccattagatc 13935034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 32536732 - 32536788
Alignment:
Q  212 gagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| ||||||||||||||||||||  || || ||||||||| |||||| ||||||    
T  32536732 gagttctttcccaccatgggaaagttgatcatgtccattagattaaatggggaacat 32536788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 51421595 - 51421716
Alignment:
Q  24 agagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgggaaag 123  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||     
T  51421595 agagatggtagtggaagatagtgacaaaaatatagtgttgagagtgtatgataagattgtagatttaatggttcaaattgactttcccatggtgggaaac 51421694  T
Q  124 aactcccctttcccatgctaaa 145  Q
    || ||||||||| |||||||||    
T  51421695 aattcccctttctcatgctaaa 51421716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 51420989 - 51420861
Alignment:
Q  24 agagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgggaaag 123  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| |||     
T  51420989 agagatggtagtggaagatagtgacaaaaatatagtgttgagagtgtatgacaagattgtagatctaatggttaaaaatgactttcctatggtggaaaac 51420890  T
Q  124 aactcccctttcccatgctaaatgccacc 152  Q
    |||| || |||||||||||||||||||||    
T  51420889 aacttccttttcccatgctaaatgccacc 51420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 33968181 - 33968261
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||||||||||||||||||||| | |||||||||||||||||||| |  || |||||||||||||||| || |||||||    
T  33968181 ggtggggtttagcatgggaaagggaacttgtttcccaccatgggaaaatattttttgaccattagatcaattgaagaacat 33968261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 45297548 - 45297618
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaa 257  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||| || || |||||||||||||    
T  45297548 gggtggggtttagtatgggaaaggagagttgtttcccatcatgggaaagttttttttaaccattagatcaa 45297618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 49161856 - 49161788
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| ||||||||||    
T  49161856 ggtgaggtttagcatgggaaaggggaattgtttcccaccatgggaaagttttttatgagcattagatca 49161788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 38337511 - 38337421
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||| ||||||||||||||||||||||| || | |||||| |||||| |||| ||||||||  |||||| ||| || ||||||||    
T  38337511 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacac 38337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 33455829 - 33455780
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33455829 ggtggggtttagcatgggaaaggggaattgtttcccaccataggaaagtt 33455780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 51421723 - 51421675
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  51421723 ggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagt 51421675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 49160987 - 49161034
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  49160987 ggtggggtttagcatgggaaaggggagttgtttcctaccatggaaaag 49161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 43768807 - 43768741
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||| || |  ||||||||||    
T  43768807 ggtggggtttagcatgggaatggagagttgttttccaccatgggaaagtttttttcaaccattagat 43768741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 45501337 - 45501263
Alignment:
Q  193 ggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaaca 267  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| | | |  |||||| ||||||||| ||||||    
T  45501337 ggtttagtatgggaaaggggagttgttttccaccatgggaaagtaaatttaaaccattggatcaaatgaagaaca 45501263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 8652810 - 8652858
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  8652810 ggtggggtttagcatgggaaaggggaatcggttcccaccatgggaaagt 8652858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 8653768 - 8653696
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||||||||||| |||||||  ||||||||||||||| |||||| | | || |||||| |||||||||    
T  8653768 ggtggggtttagcatggaaaagggggattgtttcccaccatgagaaagtaaattttaaccatttgatcaaatg 8653696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 43768033 - 43768091
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||| || |||||||||||||||||||||||||| || || ||||||||||    
T  43768033 tttagcatgggaatggagagttgtttcccaccatgggaaagtt-tttttaaccattagat 43768091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 38336958 - 38337024
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||| ||||| ||||||||||||||||||||||| || | |||||| |||||| |||| ||||||||    
T  38336958 tggggaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacat 38337024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 33454866 - 33454915
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||  | ||||||||||||||| |||||||    
T  33454866 ggtggggtttagcatgggaaaggaaaattgtttcccaccatgagaaagtt 33454915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 44021286 - 44021334
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||    
T  44021286 ggtggggtttagcatgggaaagaa-agttgtttcccaccatgggaaagtt 44021334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 930482 - 930411
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  930482 gggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 930411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 51420868 - 51420928
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatc 255  Q
    |||||||||||||| || |||||||| ||||||| ||||||| ||| || |||||||||||    
T  51420868 tttagcatgggaaaaggaagttgttttccaccataggaaagtcatttttaaccattagatc 51420928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 55124414 - 55124482
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||||||||||||||||||||| |   |||||||||||||||||| | | | ||||| |||||||||    
T  55124414 ggtggggtttagcatgggaaagggaaagagtttcccaccatgggaaaataaatattgactattagatca 55124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 11442203 - 11442133
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  11442203 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 11442133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 32474510 - 32474440
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  32474510 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 32474440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 43521077 - 43521147
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  43521077 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 43521147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 15450259 - 15450305
Alignment:
Q  222 ccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||||||||||| ||||||||||||||| || | ||||||||    
T  15450259 ccaccatgggaaagttaatcttgaccattagattaagtagagaacat 15450305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 20586078 - 20586143
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || |||||||||||||||    
T  20586078 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaat 20586143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 929940 - 929981
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  929940 tttcccaccatgggaaagttagtttttgaccattagatcaaa 929981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 5113204 - 5113268
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  5113204 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 5113268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 8439483 - 8439532
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||| ||||| ||| |||| | ||||||||||||||||||||    
T  8439483 ggtggggtttagtatgggtaagtggagatttttcccaccatgggaaagtt 8439532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 20586626 - 20586562
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  20586626 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 20586562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 26006152 - 26006216
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  26006152 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 26006216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 33455781 - 33455822
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  33455781 actttcctatggtgggaaacaattcccctttcccatgctaaa 33455822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 43768074 - 43768025
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||| ||||||| ||||| || |||||||||||||||||||||    
T  43768074 actttcccatggtgggaaacaactctccattcccatgctaaatgccacca 43768025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 44407000 - 44406935
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||||  |  |||||||||||||||||||||||| | | ||  |||||||||||||||    
T  44407000 tttagcatgggaatagatagttgtttcccaccatgggaaagtaaattttacccattagatcaaatg 44406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 44406944 - 44407013
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccaccaacagt 158  Q
    |||||| ||||||| ||||||| ||| ||||||| ||||  |  ||||||||||||||||||||| ||||    
T  44406944 taatgggtaaaatttactttcccatggtgggaaacaactatctattcccatgctaaatgccaccatcagt 44407013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 45297621 - 45297556
Alignment:
Q  80 ttgtagatttaatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    |||| ||| ||||||||||||   ||||||| ||||||||||| ||||| |||||||||| |||||    
T  45297621 ttgttgatctaatggttaaaaaaaactttcccatgatgggaaacaactctcctttcccatactaaa 45297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 53714464 - 53714415
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| |||||||||||||||||| | || |||||||| |||||||||||    
T  53714464 ggtggagtttagcatgggaaagggaaattctttcccactatgggaaagtt 53714415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 26836386 - 26836346
Alignment:
Q  112 atgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||||||| || ||||||||||||||||||||| ||||    
T  26836386 atgatgggaaacaattcccctttcccatgctaaatgtcacc 26836346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 49287817 - 49287770
Alignment:
Q  34 gtggaagatagtgacaaaaatatc--gtgttgagagtgtatgataaga 79  Q
    |||||||||||||||||||| ||   ||||||||||||||||||||||    
T  49287817 gtggaagatagtgacaaaaaaatttggtgttgagagtgtatgataaga 49287770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 38932048 - 38932177
Alignment:
Q  24 agagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgggaaag 123  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| |||     
T  38932048 agagatggtagtggaagatagtgacaaaaatatagtgttgagagtgtatgacaagattgtagatctaatggttaaaaatgactttcctatggtggaaaac 38932147  T
Q  124 aactcccctttcccatgctaaatgccacca 153  Q
    |||| || ||||||||||||||||||||||    
T  38932148 aacttccttttcccatgctaaatgccacca 38932177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 38931442 - 38931321
Alignment:
Q  24 agagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgggaaag 123  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||||     
T  38931442 agagatggtagtggaagatagtgacaaaaatatagtgttgagagtgtatgataagattgtagatctaatggttcaaattgactttcccatggtgggaaac 38931343  T
Q  124 aactcccctttcccatgctaaa 145  Q
    || ||||||||| |||||||||    
T  38931342 aattcccctttctcatgctaaa 38931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 4641812 - 4641730
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||| |  |||||| |||||||| ||||||||    
T  4641812 agggtggagtttagcatgggaaaggggaattgtttcccaccaagggaaagtaattttcaaccattggatcaaatagagaacat 4641730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 4640528 - 4640599
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||| ||| |  |||||||||||||||    
T  4640528 ggtggagtttagcatggtaaaggggaattgtttcccaccatgggaaagtaattttcaaccattagatcaaat 4640599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 31788325 - 31788244
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| ||||||| ||||||| | | |||||||||||||||||||||||||| | || |||||||||| |||| ||||||||    
T  31788325 gggtgaggtttagtatgggaatgagaagttgtttcccaccatgggaaagttaattttaaccattagataaaatagagaacat 31788244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 41884277 - 41884189
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt-attcttgaccattagatcaaatggagaacatgattttat 276  Q
    ||||||||||||||||| |||||| | |||||||||||||| |||||||| |||| | || ||||||||||||| |||||||||| ||||    
T  41884277 ggtggggtttagcatggaaaagggaaattgtttcccaccataggaaagttgattc-taactattagatcaaatgaagaacatgatattat 41884189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 48835145 - 48835096
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48835145 ggtggggtttagcatgggaaaggggaattgttttccaccatgggaaagtt 48835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 38931314 - 38931362
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  38931314 ggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagt 38931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 14924671 - 14924778
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaacc 284  Q
    |||||||| |||||   |||||||||| ||||||||||||||||||||||| || | |||||| ||| || |||| ||||||||  |||||| ||| ||     
T  14924671 tagggtggtgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttaaattaaatagagaacatatttttatcatagaca 14924770  T
Q  285 ctcaacac 292  Q
    ||||||||    
T  14924771 ctcaacac 14924778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 30466187 - 30466230
Alignment:
Q  193 ggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30466187 ggtttagcatgggaatggggagttgtttcccaccatgggaaagt 30466230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 31787475 - 31787558
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||||| |||||| ||||||| ||| |||||||||||||||||| |||| || | ||||||||||||| || | ||||||||    
T  31787475 tagggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattagataaagtagagaacat 31787558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 2687775 - 2687717
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgac 246  Q
    |||||||||||||||||||||||  | |||||||||||||||||||| ||||| |||||    
T  2687775 ggtggggtttagcatgggaaaggataattgtttcccaccatgggaaaattatttttgac 2687717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 47334199 - 47334248
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  47334199 ggtggggtttagcctggaaaaggggagttgtttcccacaatgggaaagtt 47334248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 292
Target Start/End: Original strand, 11469097 - 11469185
Alignment:
Q  204 ggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||| ||||||||||||||||||||||| || | ||||||||||||| |  | ||||||||  |||||| ||| || ||||||||    
T  11469097 ggaaagggaagttgtttcccaccatgggaaagctaattttgaccattagataaggtagagaacatacttttatcatagacactcaacac 11469185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 50950943 - 50950891
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  50950943 ggtggggtttagcatgggaatgggaagttgtttcccaccataggaaaattatt 50950891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 11031438 - 11031497
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||| |||||||||||||| | ||||||||||||||||||||||   |||||||||||||    
T  11031438 tttaacatgggaaaggggaatagtttcccaccatgggaaagttaaatttgaccattagat 11031497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 14925365 - 14925286
Alignment:
Q  213 agttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    ||||||||||||||||||||||| || | ||||||||||||| || | ||||||||  |||||| ||| || ||||||||    
T  14925365 agttgtttcccaccatgggaaagctaattttgaccattagataaactagagaacatacttttatcatagacactcaacac 14925286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 45923180 - 45923109
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaa 258  Q
    ||||| |||||||||||||| |||| | |||||| ||||||||| |||||| || ||| |||||||||||||    
T  45923180 gggtgaggtttagcatgggatagggaaattgttttccaccatggaaaagttttttttgtccattagatcaaa 45923109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 27420341 - 27420268
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaa-gttattcttgaccattagatcaaatg 260  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||| |||  || || |||||||||||||||||||    
T  27420341 ggtgggggttagcatgggtaagggaagttatttcccaccatggaaaatattttttttgaccattagatcaaatg 27420268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 45922232 - 45922281
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||||||||||    
T  45922232 ggtggagtttaacatgggaaagggaggttgtttcccaccatgggaaagtt 45922281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 46134665 - 46134576
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatggg-aaagttattcttgaccattagatcaaatggagaacatgattttat 276  Q
    |||| ||||||| ||||||||||| |||||||||||| |||||| ||| ||| | || |||||||||||||||  ||| |||||| ||||    
T  46134665 ggtgtggtttagtatgggaaagggaagttgtttcccatcatgggaaaacttactttttaccattagatcaaatatagaccatgatgttat 46134576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 27418164 - 27418235
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||| ||||||| ||||||||||| | |||||||||||||||  ||||| ||| || ||||||||||||||||    
T  27418164 ggtgaggtttagtatgggaaagggaa-ttgtttcccaccatgaaaaagtaatttttaaccattagatcaaatg 27418235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 29334221 - 29334285
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    ||||||||||||| ||  |||||||||||||||||||||||| | | ||  ||||||||||||||    
T  29334221 tttagcatgggaatggatagttgtttcccaccatgggaaagtaaattttacccattagatcaaat 29334285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 30781032 - 30780984
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||| |||||| ||||||||||| ||||||||||||| |||||||||||    
T  30781032 ggtgaggtttaacatgggaaaggagagttgtttcccatcatgggaaagt 30780984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 38932169 - 38932109
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatc 255  Q
    |||||||||||||| || |||||||| ||||||| ||||||| ||| || |||||||||||    
T  38932169 tttagcatgggaaaaggaagttgttttccaccataggaaagtcatttttaaccattagatc 38932109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 41882174 - 41882249
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtt-attcttgaccattagatcaaatggagaacatg 269  Q
    ||||||| ||||||| |||||| |||||||||||| |||||||| |||| |||| ||| ||||||||| ||||||||    
T  41882174 gtttagcctgggaaaagggagtagtttcccaccataggaaagttgattc-tgactattggatcaaatgaagaacatg 41882249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 47334900 - 47334948
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||||||||||    
T  47334900 actttcctatggtgggaaacaactcccttttcccatactaaatgccacc 47334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 294625 - 294672
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    ||||| |||||| ||||||| |||||||| ||||||||||||||||||    
T  294625 ggtggcgtttagtatgggaatggggagttttttcccaccatgggaaag 294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 6766974 - 6767045
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    ||||| |||||| |||| |||||||| |||||| ||| ||||| |||||| || || |||||||||||||||    
T  6766974 ggtggagtttagtatggaaaaggggaattgttttccatcatggaaaagttttttttaaccattagatcaaat 6767045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 11032260 - 11032201
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||| |||||||||||||| | |||||||||||||||||||||    |||||||||||||    
T  11032260 tttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagat 11032201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 28371751 - 28371681
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  28371751 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 28371681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 29334277 - 29334214
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    |||||| ||||||| ||||||| ||| ||||||| ||||  || ||||||||||||||||||||    
T  29334277 taatgggtaaaatttactttcccatggtgggaaacaactatccattcccatgctaaatgccacc 29334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 34716424 - 34716471
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    |||||||||||||||||||| || ||||||||||||| ||||| ||||    
T  34716424 ggtggggtttagcatgggaatggagagttgtttcccatcatggaaaag 34716471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 40028767 - 40028830
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    |||||| ||||||| ||||||||||| ||||||| ||||  || ||| ||||||||||||||||    
T  40028767 taatggataaaatttactttcctatggtgggaaacaactatccattctcatgctaaatgccacc 40028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 49420084 - 49420155
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    |||| ||||||| ||||||||||  ||||||||||||  ||||||||| | || ||||||||||||| ||||    
T  49420084 ggtgaggtttagtatgggaaaggaaagttgtttcccatgatgggaaagctttttttgaccattagattaaat 49420155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 50428196 - 50428145
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||| ||||||| || ||||||||| ||| ||||||||||||    
T  50428196 agggtggggtttagaatgggaatggagagttgttttccatcatgggaaagtt 50428145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 16270221 - 16270279
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  16270221 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 16270279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 23440899 - 23440841
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  23440899 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 23440841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 42383720 - 42383785
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||| ||||||||| | |||||||||| | |||||||||||| || || ||||||||||    
T  42383720 ggtggggtttagtatgggaaagagaagttgtttcctatcatgggaaagtt-ttttttaccattagat 42383785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 43316419 - 43316357
Alignment:
Q  90 aatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||| ||||||| ||||||| ||| ||||||| ||||  || ||||||||||||||||||||    
T  43316419 aatggataaaatttactttcccatggtgggaaacaactatccattcccatgctaaatgccacc 43316357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 43317164 - 43317118
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaa 234  Q
    |||||||||||||||||||| | | |||||||||||| |||||||||    
T  43317164 ggtggggtttagcatgggaatgagaagttgtttcccatcatgggaaa 43317118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 47334941 - 47334899
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||    
T  47334941 tttagtatgggaaaagggagttgtttcccaccataggaaagtt 47334899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 51974451 - 51974517
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||| ||||| ||||||||||||||||||||  || || | ||||||| ||||| |||||||    
T  51974451 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacat 51974517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 2820987 - 2821028
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  2820987 tttcccaccatgggaaagttagtttttgaccattagatcaaa 2821028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 2821508 - 2821467
Alignment:
Q  218 tttcccaccatgggaaagtt-attcttgaccattagatcaaa 258  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  2821508 tttcccaccatgggaaagttaatttttgaccattagatcaaa 2821467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 12800489 - 12800448
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  12800489 tttcccaccatgggaaagttagtttttgaccattagatcaaa 12800448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 36272588 - 36272547
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    ||||||||||||| ||| | ||||||||||||||||||||||    
T  36272588 tttagcatgggaatgggaacttgtttcccaccatgggaaagt 36272547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 36385668 - 36385717
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||| |||| |||||| |||||||| ||| ||||||||||||    
T  36385668 ggtggggtttagtatggaaaagggaagttgttttccatcatgggaaagtt 36385717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 43316364 - 43316405
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  43316364 tttagcatgggaatggatagttgtttcccaccatgggaaagt 43316405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 43755855 - 43755919
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  43755855 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 43755919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 9948919 - 9948863
Alignment:
Q  204 ggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  9948919 ggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 9948863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 17151002 - 17151053
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    |||| ||||||||||||||||||   ||| |||||||||||||||||||||||    
T  17151002 ggtgaggtttagcatgggaaaggctggtt-tttcccaccatgggaaagttatt 17151053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 40648916 - 40648964
Alignment:
Q  189 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||| ||||| |||  ||||| ||||||||||||||||||||    
T  40648916 gtggggtttagtatgggtaagttgagttttttcccaccatgggaaagtt 40648964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 42607081 - 42607153
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||    
T  42607081 ggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagatcaaatg 42607153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 24995852 - 24995918
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  24995852 ggtggggtttagaatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagat 24995918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 24996725 - 24996651
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||| || || |||||||    
T  24996725 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagattaattgaagaacat 24996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 40257844 - 40257778
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| || ||| |||||||||||||||    
T  40257844 gtttagcatgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagatcaaatg 40257778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 29060787 - 29060738
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29060787 ggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagtt 29060738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 40320458 - 40320389
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaa 257  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||| || |  |||||||||||||    
T  40320458 ggtggggtttagcatgggaaaggagagttgtttcccaccatggaaaagtttttttcaaccattagatcaa 40320389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 32871188 - 32871120
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| || | ||||||| |||||    
T  32871188 ggtggggtttagcatgggaatggggagttgtttcccaccataggaaagtttttttggaccatttgatca 32871120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 46757428 - 46757528
Alignment:
Q  192 gggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | | ||||||||||||| || | |||||||| ||||||| ||| || |||||||    
T  46757428 gggtttagtatgggaaagaggagttgttttccaccatgagaaagtaaatattgaccattagataaagtagagaacataattttatcatagacactcaaca 46757527  T
Q  292 c 292  Q
    |    
T  46757528 c 46757528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 27599224 - 27599277
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  27599224 atgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagat 27599277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 36844610 - 36844659
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  36844610 agggtggggtttagcatgggaaaggtgagttgtttcccaccatgagaaag 36844659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 6730205 - 6730134
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || || || ||| ||||| |||||||||    
T  6730205 ggtggggtttagcatgggaaagggaagttgtttcccaccatggggaa-ttttttttgtccattggatcaaatg 6730134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 12732247 - 12732315
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||| | | |||||||||||||||    
T  12732247 ggtggggtttagcatgggaaagggaaagagtttcccaccatgggaaagtaaatattgaccattagatca 12732315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 40257580 - 40257652
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||| |||||||| | ||||||||| | ||||||| ||||||||| ||| |||||||||||||||    
T  40257580 ggtggggtttagtatgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagatcaaatg 40257652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 42607860 - 42607789
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||||||||||| |||||||| |||||||||| ||| ||||||||||| ||| ||||| |||||||||    
T  42607860 ggtggggtttagcatggaaaaggggaattgtttcccatcataggaaagttatttttgtccatt-gatcaaatg 42607789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 6729397 - 6729470
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||| |||||||||||||||| || |||||| |||| ||||||||||| |||||| || || |||||||||    
T  6729397 gggtgggatttagcatgggaaaggagaattgttttccactatgggaaagtttttcttgtcccttggatcaaatg 6729470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 27600130 - 27600093
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27600130 atgggaaaggggagttgtttcccaccatgggaaagtta 27600093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 46759303 - 46759230
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| |||||||||||||||||||||||| ||| | |||| || ||||||||||||||| || | ||||||||    
T  46759303 tttagtatgggaaaggggagttgtttcccatcatagcaaagctaatcttgaccattagataaagtagagaacat 46759230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 46759263 - 46759310
Alignment:
Q  105 ctttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  46759263 ctttgctatgatgggaaacaactcccctttcccatactaaatgccacc 46759310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 668193 - 668259
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| ||||| |||||||    
T  668193 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacat 668259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 32548721 - 32548643
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaac 266  Q
    |||||||||||| |||||||| |  | |||||||||||||||||||||||| | ||  |||||||||||| | ||||||    
T  32548721 ggtggggtttagtatgggaaatgatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 32548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 36845250 - 36845184
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||| ||||||||||||||||||||| ||||||| || ||||| |||||| ||  ||||||||||||    
T  36845250 ggtgaggtttagcatgggaaaggggaattgtttctcatcatggaaaagttttttatgaccattagat 36845184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 43846963 - 43846915
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  43846963 ggtggcgtttagcctgggaaaggggagtt-tttcccaccatgggaaagtt 43846915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 44540988 - 44541029
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatg 229  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  44540988 ggtgaggtttagcatgggaaaggagagttgtttcccaccatg 44541029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 5064693 - 5064645
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||||||    
T  5064693 ggtggggtttagcatgggaatgggaagttctttcccatcatgggaaagt 5064645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 9122657 - 9122692
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgg 230  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9122657 tttagcatgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 27599274 - 27599211
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||| ||| || ||||||| ||| ||||||| ||||||||||||||||  |||||||||||    
T  27599274 taatggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 35771307 - 35771260
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    |||||||||||| |||||||||   |||||||||||||||||||||||    
T  35771307 ggtggggtttagtatgggaaagcaaagttgtttcccaccatgggaaag 35771260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 17145636 - 17145694
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  17145636 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 17145694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 25137418 - 25137483
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || |||||||||||||||    
T  25137418 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaat 25137483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 32547707 - 32547781
Alignment:
Q  192 gggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaac 266  Q
    |||||||||||||||||||    |||||| ||||||| ||||||||| | ||  |||||||||||||| ||||||    
T  32547707 gggtttagcatgggaaaggattcttgttttccaccataggaaagttaatgttagccattagatcaaatagagaac 32547781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 37469039 - 37468981
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  37469039 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 37468981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 38779597 - 38779539
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  38779597 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 38779539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 40319606 - 40319652
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaa 234  Q
    |||||||||||| ||||||| || ||||| |||||||||||||||||    
T  40319606 ggtggggtttagtatgggaatggagagttatttcccaccatgggaaa 40319652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 4180357 - 4180316
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  4180357 tttcccaccatgggaaagttagtttttgaccattagatcaaa 4180316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 5064645 - 5064686
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||| |||||||||||||||| ||| |||||||||||||    
T  5064645 actttcccatgatgggaaagaacttcccattcccatgctaaa 5064686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 20560300 - 20560259
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  20560300 tttcccaccatgggaaagttagtttttgaccattagatcaaa 20560259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 24996683 - 24996724
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||    
T  24996683 actttcccatggtgggaaacaactcccctttcccatgctaaa 24996724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 32871140 - 32871181
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||| ||||||| |||||||| |||||||||||||    
T  32871140 actttcctatggtgggaaacaactccccattcccatgctaaa 32871181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 33140313 - 33140272
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  33140313 tttcccaccatgggaaagttagtttttgaccattagatcaaa 33140272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 41194527 - 41194576
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccatta 251  Q
    ||||||||| ||||| ||||||||||||||||||||| || || ||||||    
T  41194527 tgggaaaggagagttctttcccaccatgggaaagttaatcatgtccatta 41194576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 42607812 - 42607853
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||||||||||| || |||||||| ||||||||||    
T  42607812 actttcctatgatgggaaacaattccccttttccatgctaaa 42607853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 42901155 - 42901114
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  42901155 tttcccaccatgggaaagttagtttttgaccattagatcaaa 42901114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 44541749 - 44541708
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    ||||||||||||||| ||| |||||||| |||||||||||||    
T  44541749 tttagcatgggaaagtggaattgtttccgaccatgggaaagt 44541708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 9122686 - 9122650
Alignment:
Q  116 tgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  9122686 tgggaaacaacttccctttcccatgctaaatgccacc 9122650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 9123525 - 9123485
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccat 228  Q
    ||||||||||| ||| ||||||||||||||||| |||||||    
T  9123525 ggtggggtttaccataggaaaggggagttgttttccaccat 9123485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 27600095 - 27600143
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||| ||| ||||||| ||||||||||||||||  |||||||||||    
T  27600095 actttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 35770404 - 35770357
Alignment:
Q  34 gtggaagatagtgacaaaaatatc--gtgttgagagtgtatgataaga 79  Q
    ||||||||||||||||||||  ||  ||||||||||||||||||||||    
T  35770404 gtggaagatagtgacaaaaaattctggtgttgagagtgtatgataaga 35770357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 36390957 - 36391029
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | | || ||||||||||||||||    
T  36390957 ggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaatg 36391029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 34617653 - 34617719
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||    
T  34617653 ggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagttatttttgaccattagat 34617719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 273
Target Start/End: Complemental strand, 2307124 - 2307036
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattt 273  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||| ||||||  ||  ||||||||||||||  || ||||||||||||    
T  2307124 tagggtgaggtttagcatgggaaagggaagttgttttccaccatgagaaagtattttgtgaccattagatcatttgaagaacatgattt 2307036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 7868189 - 7868118
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| | | || |||| ||||||||||    
T  7868189 ggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaagtaaattttaaccactagatcaaat 7868118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 23876111 - 23876064
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23876111 ggtggggtttagcatgggaaatgggagttgtttcccaccatgggaaag 23876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 6084864 - 6084939
Alignment:
Q  181 tatatagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||| ||  ||||||||| ||||    
T  6084864 tatattgggtgaggtttaacatgggaaaggggaattgtttcccatcatgggaaagttttttatgaccattaaatca 6084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 6085749 - 6085702
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  6085749 ggtggggtttagcatgggaaaggtgagttgtttcctaccatgggaaag 6085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 15602863 - 15602800
Alignment:
Q  193 ggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||||||| |||||||| |||||||||||||||||||||| |  || |||||||||||||||    
T  15602863 ggtttagcataggaaagggaagttgtttcccaccatgggaaaatattttttgaccattagatca 15602800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 23875245 - 23875308
Alignment:
Q  193 ggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    ||||||||||||||||||||| ||||||| || |||||||||||| ||  ||||||||||||||    
T  23875245 ggtttagcatgggaaaggggaattgtttcgcatcatgggaaagttttttatgaccattagatca 23875308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 20992067 - 20992001
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||| || |  ||||||||||    
T  20992067 ggtggggtttagcatgggaatggagagttgttttccaccatgggaaagtttttttcaaccattagat 20992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 4059048 - 4058983
Alignment:
Q  204 ggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatg 269  Q
    |||||||||| | |||||||||||| ||||||||  | ||||| ||||||||||||||||||||||    
T  4059048 ggaaaggggactagtttcccaccataggaaagttgattttgactattagatcaaatggagaacatg 4058983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 7868129 - 7868189
Alignment:
Q  92 tggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||||||| ||||||| ||| ||||||| |||||||||||| |||||||||| |||||    
T  7868129 tggttaaaatttactttcccatggtgggaaacaactcccctttctcatgctaaatcccacc 7868189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 36391020 - 36390964
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    |||||||||||||| ||||||| ||| ||||||| |||| |||||||||||||||||    
T  36391020 taatggttaaaatttactttcccatggtgggaaacaacttccctttcccatgctaaa 36390964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 5005509 - 5005462
Alignment:
Q  105 ctttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    |||||| ||||||||||| || ||||||||||||||||||||||||||    
T  5005509 ctttcccatgatgggaaacaattcccctttcccatgctaaatgccacc 5005462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 36391654 - 36391713
Alignment:
Q  86 atttaatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||||||||| ||||||| ||| ||| ||| |||||||||||||||| |||||    
T  36391654 atttaatggttaaaatttactttcccatggtggaaaacaactcccctttcccatactaaa 36391713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 36391715 - 36391672
Alignment:
Q  193 ggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  36391715 ggtttagtatgggaaaggggagttgttttccaccatgggaaagt 36391672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 10670990 - 10670924
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||| ||||||||||||||||||  ||||||||  |||||||| |||||| ||||| ||||||||||    
T  10670990 ggtgaggtttagcatgggaaaggaaagttgtttttcaccatggaaaagtttttcttaaccattagat 10670924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 21471031 - 21471097
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| ||||| |||||||    
T  21471031 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacat 21471097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 24383111 - 24383061
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgttt-cccaccatgggaaagtt 237  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  24383111 ggtggggtttagtatgggaaagggaagttgtttccccaccatgggaaagtt 24383061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 37545692 - 37545742
Alignment:
Q  204 ggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||| ||||||||||||||||||||||||||   |||||||||||||    
T  37545692 ggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagat 37545742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 41519967 - 41519893
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| || |||||| ||| || || | ||||||||    
T  41519967 gtttagtatgggaaagggaagttttttcccaccatgggaaagttttttttgaccgttaaataaagtagagaacat 41519893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 44094872 - 44094802
Alignment:
Q  181 tatatagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccatta 251  Q
    |||||| |||||| ||||||||||||||||  ||||||||||||||||   |||||| || ||||||||||    
T  44094872 tatatatggtgggatttagcatgggaaaggaaagttgtttcccaccataaaaaagttttttttgaccatta 44094802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 36476776 - 36476723
Alignment:
Q  206 aaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    ||||||||||| ||||||| |||||||||| | |||||||||||||||| ||||    
T  36476776 aaaggggagttctttcccatcatgggaaagattttcttgaccattagattaaat 36476723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 37546599 - 37546562
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37546599 atgggaaaggggagttgtttcccatcatgggaaagtta 37546562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 37546564 - 37546613
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  37546564 actttcccatgatgggaaacaactcccctttcccattttaaatgccacca 37546613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 4975696 - 4975776
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| |||||| ||||||| ||| |||||||||||||||||| |||| || | |||||||||| || || | ||||||||    
T  4975696 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattaaataaagtagagaacat 4975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 4976553 - 4976473
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||| ||||||| ||||| | | | ||||||||||||| |||||||||||| | || |||||||||| |||| ||||||||    
T  4976553 ggtgaggtttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacat 4976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 4994460 - 4994380
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||| ||||||| ||||| | | | ||||||||||||| |||||||||||| | || |||||||||| |||| ||||||||    
T  4994460 ggtgaggtttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacat 4994380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5005469 - 5005509
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  5005469 tttagcatgggaaaggggaattgtttcccatcatgggaaag 5005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 41768728 - 41768792
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| |||||||||||||| ||| ||||||| |||| | ||  |||||||||||||||||||    
T  41768728 taatggtcaaaattgactttcccatggtgggaaacaacttcactgacccatgctaaatgccacca 41768792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 8145386 - 8145433
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 235  Q
    |||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  8145386 ggtggggtttagaatgggaatgaagagttgtttcccaccatgggaaag 8145433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 20991294 - 20991353
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||| || ||||||||| |||||||||||||||| || |  ||||||||||    
T  20991294 tttagcatgggaatggagagttgttttccaccatgggaaagtttttttcaaccattagat 20991353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 36719004 - 36719071
Alignment:
Q  86 atttaatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    |||||||||||||||||  |||||||||| | ||||| || |  |||||||||| |||||||||||||    
T  36719004 atttaatggttaaaattagctttcctatggtaggaaacaagtttcctttcccatactaaatgccacca 36719071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 41768784 - 41768725
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||  || | |||||||||||||||||||||||| | | |||||||||||||    
T  41768784 tttagcatgggtcagtgaagttgtttcccaccatgggaaagtcaattttgaccattagat 41768725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 4479736 - 4479678
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| |||| |||||||||||||||| || || ||||||||| |||||    
T  4479736 tgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatg 4479678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 14573275 - 14573333
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  14573275 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatg 14573333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 42370991 - 42370921
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaa 265  Q
    ||||| ||||||| ||  |||||||||||||||||||||||| | | ||| ||||||||| || |||||||    
T  42370991 tttagtatgggaatggaaagttgtttcccaccatgggaaagtaaatattggccattagataaagtggagaa 42370921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 3705366 - 3705407
Alignment:
Q  218 tttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  3705366 tttcccaccatgggaaagttagtttttgaccattagatcaaa 3705407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 8536171 - 8536240
Alignment:
Q  222 ccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    ||||||||||||||| | | ||||| ||||||| || | |||||||||||||||| ||| || |||||||    
T  8536171 ccaccatgggaaagtaaatattgacgattagataaagtagagaacatgattttatcatagacactcaaca 8536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 16903939 - 16903875
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  16903939 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 16903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 30899396 - 30899460
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  30899396 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 30899460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 38740444 - 38740492
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| ||||||  ||||||||||||||| ||||||||||||||||||||    
T  38740444 ggtggcgtttagtctgggaaaggggagtt-tttcccaccatgggaaagtt 38740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 4386126 - 4386173
Alignment:
Q  34 gtggaagatagtgacaaaaatatc--gtgttgagagtgtatgataaga 79  Q
    ||||||||||||||||||||  ||  ||||||||||||||||||||||    
T  4386126 gtggaagatagtgacaaaaaattctagtgttgagagtgtatgataaga 4386173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 4769052 - 4769100
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||||||| |||||||| | |||||||| ||||| |||||||||||    
T  4769052 actttcctatggtgggaaaggattccccttttccatgttaaatgccacc 4769100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 5850250 - 5850210
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaa 144  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  5850250 actttcctatgaagggaaagaactcctctttcccatactaa 5850210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 8146697 - 8146637
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||| |||||||||||| |||||||| |||  ||||||||||| || || ||||||||||    
T  8146697 gtttaacatgggaaagggaagttgttttccatgatgggaaagttttttttaaccattagat 8146637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 16681565 - 16681636
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    ||||| |||||||||||||||| |  |||| ||||||| ||||||||||||| || ||| |||||||||||||    
T  16681565 gggtgaggtttagcatgggaaa-gctagttatttcccatcatgggaaagttagtttttggccattagatcaaa 16681636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 30545469 - 30545417
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||| ||||||||||||  ||||||||||| || || ||||||||||    
T  30545469 tgggaaagggaagttgtttcccatgatgggaaagttttttttaaccattagat 30545417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 34924850 - 34924798
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    |||| ||||||||||||||||||  ||||| || ||||||||| |||||||||    
T  34924850 ggtgaggtttagcatgggaaaggttagttgctttccaccatggaaaagttatt 34924798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 36476747 - 36476795
Alignment:
Q  105 ctttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    |||||| ||||||||||||||||||||||| | | ||||||||| ||||    
T  36476747 ctttcccatgatgggaaagaactccccttttctaggctaaatgcaacca 36476795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 292
Target Start/End: Original strand, 42369643 - 42369747
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctc 287  Q
    |||||||||||| |||| |||||  |||||||||   |||||||||||| | | ||  ||||||||| || | |||||||| ||||||| ||| || |||    
T  42369643 ggtggggtttagtatggaaaaggaaagttgtttcaatccatgggaaagtaaatattagccattagataaagtagagaacataattttatcatagacactc 42369742  T
Q  288 aacac 292  Q
    |||||    
T  42369743 aacac 42369747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 25970106 - 25970155
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25970106 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 25970155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 34155674 - 34155594
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    |||||||||||||||||||||||| | |||||| ||||||||| |||||  || |||||||||||||||| || |||||||    
T  34155674 ggtggggtttagcatgggaaagggaacttgttttccaccatggaaaagtattttttgaccattagatcaattgaagaacat 34155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 23383310 - 23383389
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaaca 267  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||||| | ||  ||||| ||||||||| ||||||    
T  23383310 ggtggggtttagaatgagaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaaca 23383389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 41261122 - 41261201
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaaca 267  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||||| ||||| |||||||||| ||| | ||||||    
T  41261122 ggtgaggtttagcatgggaaaggaaagttgttttccaccatgggaaagtttttcttaaccattagattaaaagtagaaca 41261201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 232097 - 232031
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| | | || ||||||||||    
T  232097 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagat 232031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 33370923 - 33370854
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaa 257  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||||| | ||  ||||||||||||    
T  33370923 ggtggggtttagcatgggaaaggatacttgtttcccaccatgggaaagttaatgttagccattagatcaa 33370854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 39429985 - 39429936
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  39429985 ggtggggtttagcatgggaatggagagttgtttcccaccatgggaaagtt 39429936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 10421615 - 10421525
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||| |||||||| |||||||||||||| || | |||||| |||||| |||| ||||||||  |||||| ||| || ||||||||    
T  10421615 tgggaaagggaagttgttttccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacac 10421525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 36450735 - 36450777
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  36450735 tttagcatgggaaaggggagttgttttccaccatgggaaagtt 36450777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 47377632 - 47377594
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47377632 tgggaaaggggagttgtttcccaccatgggaaagttatt 47377594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 6246798 - 6246887
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    |||||||||| | |||||||||||||||||||||||| | ||||||||||||| |  | ||||||||  |||||| ||| || |||||||    
T  6246798 tgggaaagggaaattgtttcccaccatgggaaagttaattttgaccattagataaggtagagaacatacttttatcatagacactcaaca 6246887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 30808634 - 30808687
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||||||||| |||||||||||||||||||||||||||   |||||||||||||    
T  30808634 atgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagat 30808687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 34371475 - 34371528
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||    
T  34371475 atgggaaaggggaattgtttcccaccatgggaaagttttttttgtccattagat 34371528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 53664242 - 53664315
Alignment:
Q  218 tttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    ||||||||||||||||||| | | ||||||||||||| |||| ||||||||| |||||| ||| || |||||||    
T  53664242 tttcccaccatgggaaagtaaatattgaccattagataaaatagagaacatggttttatcatagacactcaaca 53664315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 36451474 - 36451426
Alignment:
Q  189 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  36451474 gtggggtttagcatgggaaagaggagttgtttctcaccatggaaaagtt 36451426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 22500016 - 22499942
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| ||||||||||| || |||||| ||||||| ||||||||||| |  |||||| |||||||| ||||||||    
T  22500016 gtttaacatgggaaaggagaattgttttccaccataggaaagttattttaaaccattggatcaaatagagaacat 22499942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 47326838 - 47326788
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||| || ||||||||||||||  |||||||||||||||||||||||||    
T  47326838 gggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaagtt 47326788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 47341634 - 47341584
Alignment:
Q  187 gggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||| || ||||||||||||||  |||||||||||||||||||||||||    
T  47341634 gggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaagtt 47341584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 50710435 - 50710361
Alignment:
Q  218 tttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    ||||||||||||||||||| | | ||||||||||||| || | |||||||||| ||||| ||| || ||||||||    
T  50710435 tttcccaccatgggaaagtaaatattgaccattagataaagtagagaacatgaatttatcatagacactcaacac 50710361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 232034 - 232099
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccaccaa 154  Q
    |||||||||||||| ||||||| ||| ||||||| |||| ||||||||||| |||||  |||||||    
T  232034 taatggttaaaatttactttcccatggtgggaaacaacttccctttcccatactaaaccccaccaa 232099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 6680389 - 6680324
Alignment:
Q  189 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||||||||||||| |   ||||| |||||||||||||| | | |||||||||||||    
T  6680389 gtggggtttagcatgggaaagggaaagagtttctcaccatgggaaagtaaatattgaccattagat 6680324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 38009284 - 38009337
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattc 241  Q
    |||||| ||||||||||||||||  | |||||||||||||||| ||||||||||    
T  38009284 ggtgggatttagcatgggaaaggataattgtttcccaccatggaaaagttattc 38009337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 41261938 - 41261889
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    |||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  41261938 ggtggggtttagtatgggaaatgagagttgtttcctaccatgggaaagtt 41261889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 45330578 - 45330615
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    |||||||||||||||||||||||||||||| |||||||    
T  45330578 atgggaaaggggagttgtttcccaccatggaaaagtta 45330615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 45331484 - 45331435
Alignment:
Q  205 gaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||||||||||||||| ||||||||   |||||||||||||    
T  45331484 gaaaggggagttgtttcccaccatgagaaagttaaatttgaccattagat 45331435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 47376866 - 47376943
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattat 279  Q
    ||||||||||||||||||||||| ||||||||||||  |||| ||  || ||| ||||| |||||||| | |||||||    
T  47376866 tgggaaaggggagttgtttcccatcatgggaaagttgatcttaacttttggattaaatgaagaacatggtattattat 47376943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 54006728 - 54006817
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttat-tcttgaccattagatcaaatggagaacatgattttat 276  Q
    |||| ||||||| ||||||| ||| |||||||||||| |||||||||||| | | |||||||| |||||||||  ||| |||||| ||||    
T  54006728 ggtgaggtttagtatgggaatgggaagttgtttcccatcatgggaaagttttcttttgaccatcagatcaaatatagaccatgatattat 54006817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 55514395 - 55514350
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  55514395 tttagcatgggaaaggaaagttgtttcccaccatgggaaagctatt 55514350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 231436 - 231484
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||| ||||||||||| |||||||| | |||||||||||||    
T  231436 ggtggggtttagtatgggaaagggaagttgttttctaccatgggaaagt 231484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 7987408 - 7987476
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||||||||||||||||| |||||||||||||| | ||| | |||||| || | ||| |||||||||    
T  7987408 ggtggggtttagcatgggaacggggagttgtttcctatcatagaaaagtttttttggactattagatca 7987476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 17049752 - 17049680
Alignment:
Q  78 gattgtagatttaatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgcca 150  Q
    |||||||||| ||||||||||| ||||||||| |||  | ||||| || || |||||||||| ||||||||||    
T  17049752 gattgtagatctaatggttaaatttgactttcatatattaggaaacaattctcctttcccatactaaatgcca 17049680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 22499098 - 22499178
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| ||||| ||||||||||| || |||||| ||| ||||||||||||||| |  |||||| |||||||| || |||||    
T  22499098 ggtggagtttaacatgggaaaggagaattgttttccatcatgggaaagttattttaaaccattggatcaaatagataacat 22499178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 33369909 - 33369977
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatca 256  Q
    |||||| |||||||||||||| |  | |||||||||||||||||||||||| | ||  |||||||||||    
T  33369909 ggtgggatttagcatgggaaatgatatttgtttcccaccatgggaaagttaatgttagccattagatca 33369977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 34154794 - 34154842
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||||||    
T  34154794 ggtggggtttagcatgggaaaagaaacttgtttcccaccatgggaaagt 34154842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 54453095 - 54453147
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||| |||||    
T  54453095 ggtggggtttagcatgggaatgggaagttgtttcccatcatggaaaaattatt 54453147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 12590254 - 12590179
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    ||||||||||||||   |||||||||  |||| ||| ||||||||||||||||| || ||||||||||||| ||||    
T  12590254 tagggtggggtttaatttgggaaaggctagtttttttccaccatgggaaagttagtttttgaccattagattaaat 12590179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 19860330 - 19860400
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  19860330 ggtgaggtttagcatgggaaagct-atttttttcccaccatgggaaagttagtttttgaccattagatcaaa 19860400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 23425248 - 23425189
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||| ||||||| || |||||||||||||||||||||||||| || |  ||||||||||    
T  23425248 tttagtatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccattagat 23425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 37638670 - 37638721
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||||||||||||||   ||||| |||||| ||||||||||||    
T  37638670 agggtggggtttagcatgggaaagaccagttgcttcccatcatgggaaagtt 37638721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 39429232 - 39429291
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||||||||||| || ||||||||||| |||||||||||||| || |  ||||||||||    
T  39429232 tttagcatgggaatggagagttgtttcctaccatgggaaagtttttttcaaccattagat 39429291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 3847900 - 3847958
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagt-tattcttgaccattagatcaaat 259  Q
    ||||||||| || || ||||||||||||||||||| | || ||||||||||||||||||    
T  3847900 tgggaaaggagacttttttcccaccatgggaaagtatttttttgaccattagatcaaat 3847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 11417701 - 11417759
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  11417701 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 11417759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 11417971 - 11417913
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  11417971 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 11417913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 11680290 - 11680348
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||||||||  |||| ||||||||||||||||||||| || ||||||||||||| ||||    
T  11680290 tgggaaaggttagttttttcccaccatgggaaagttagtttttgaccattagattaaat 11680348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 11688569 - 11688627
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||||||||  |||| ||||||||||||||||||||| || ||||||||||||| ||||    
T  11688569 tgggaaaggttagttttttcccaccatgggaaagttagtttttgaccattagattaaat 11688627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 15481049 - 15481139
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||| ||||| |||||||||||  |||||||||| || | |||||| |||||| |||| ||||||||  |||||| ||| || ||||||||    
T  15481049 tggggaagggaagttgtttcccgtcatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagactctcaacac 15481139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 22061330 - 22061396
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||| |||||||||| |||| ||| |||||||| |||||||||||||||| || |  ||||||||||    
T  22061330 ggtgaggtttagcattggaaggggaagttgttttccaccatgggaaagtttttttcaaccattagat 22061396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 25970844 - 25970802
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| |||||||| |||||||||||||||||||| |||||||    
T  25970844 tttagtatgggaaaagggagttgtttcccaccatgagaaagtt 25970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 26611317 - 26611259
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  26611317 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatg 26611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 33370790 - 33370916
Alignment:
Q  19 ggagcagagacggtagtggaagatagtgacaaaaatatcgtgttgagagtgtatgataagattgtagatttaatggttaaaattgactttcctatgatgg 118  Q
    |||| ||||| ||||||||||||||||||||| ||| | |||||||| |||||| ||    |  | ||| |||||| ||| ||| ||||||| ||| |||    
T  33370790 ggaggagagatggtagtggaagatagtgacaataatctagtgttgagggtgtataattctctacttgatctaatggctaacattaactttcccatggtgg 33370889  T
Q  119 gaaagaactcccctttcccatgctaaa 145  Q
    |||| || |  ||||||||||||||||    
T  33370890 gaaacaagtatcctttcccatgctaaa 33370916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 38010896 - 38010830
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    |||| ||||||||||||||||||  | |||||| ||| |||||||||||| || ||| |||||||||    
T  38010896 ggtgaggtttagcatgggaaaggatatttgttttccatcatgggaaagttgtttttgtccattagat 38010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 39652100 - 39652058
Alignment:
Q  195 tttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||| || |||||||||| |||||||||||||||    
T  39652100 tttagcatgggaatggagagttgtttctcaccatgggaaagtt 39652058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 45235990 - 45235936
Alignment:
Q  206 aaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||| ||||| ||||||||||||||||||||| || || ||||||||| |||||    
T  45235990 aaaggagagttctttcccaccatgggaaagttaatcatgtccattagattaaatg 45235936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 47523265 - 47523219
Alignment:
Q  106 tttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||| || |||||||||||||||||||||| | |||||||||||||    
T  47523265 tttcccattatgggaaagaactcccctttcctaggctaaatgccacc 47523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 50656988 - 50657062
Alignment:
Q  219 ttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacaca 293  Q
    |||||||||||| ||||||||| || ||||| |||| ||||| || ||||  |||||| |||||| |||||||||    
T  50656988 ttcccaccatggaaaagttatttttaaccatcagattaaatgaagtacatagttttatcataaacactcaacaca 50657062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 5235380 - 5235444
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  5235380 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 5235444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 20174976 - 20175040
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  20174976 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 20175040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 20351359 - 20351318
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatg 229  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  20351359 ggtggggtttagtatgggaatggagagttgtttcccaccatg 20351318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 22062274 - 22062233
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatg 229  Q
    |||||||||||| |||| |||||||| |||||||||||||||    
T  22062274 ggtggggtttagtatggaaaaggggaattgtttcccaccatg 22062233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 25370520 - 25370585
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaaca 267  Q
    |||||||||  |||| |||||||||||||||||| | ||  ||||||||||||||| || ||||||    
T  25370520 tgggaaaggctagttttttcccaccatgggaaagctttttctgaccattagatcaagtgtagaaca 25370585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 25970154 - 25970113
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||    
T  25970154 actttcccatggtgggaaacaactcccctttcccatgctaaa 25970113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 30809540 - 30809503
Alignment:
Q  201 atgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  30809540 atgggaaaggggagttgttttccaccatgagaaagtta 30809503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 31807150 - 31807101
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| ||||||  |||||| |||||||| ||||||||||||||||||||    
T  31807150 ggtggcgtttagtctgggaatggggagttctttcccaccatgggaaagtt 31807101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 36014000 - 36013951
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| ||||||||||||||| |  |||||||| ||||||||||||||||    
T  36014000 ggtggagtttagcatgggaaatgaaagttgtttaccaccatgggaaagtt 36013951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 36450776 - 36450727
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||| ||| ||| ||||||||||||||||||||||| ||||||    
T  36450776 actttcccatggtggaaaacaactcccctttcccatgctaaataccacca 36450727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 54008502 - 54008413
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttat-tcttgaccattagatcaaatggagaacatgattttat 276  Q
    |||| ||||||| ||||||| ||| |||||||||| | |||||||||||| | | |||||||| |||||||||  ||| |||||| ||||    
T  54008502 ggtgaggtttagtatgggaatgggaagttgtttccaatcatgggaaagttttcttttgaccatcagatcaaatatagaccatgatattat 54008413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 2093924 - 2093880
Alignment:
Q  224 accatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||    
T  2093924 accatgggaaagttattattgatcattagatcaaatatagaacat 2093880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 17512254 - 17512206
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagt 236  Q
    |||||||||||||||| ||| ||  |||||||||||| |||||||||||    
T  17512254 ggtggggtttagcatgagaatggatagttgtttcccatcatgggaaagt 17512206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 25655687 - 25655615
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||||||||||   ||||||||   |||| ||||||||||||||||||||| || ||||||||||||| ||||    
T  25655687 ggtggggtttaatttgggaaagactagttttttcccaccatgggaaagttagtttttgaccattagattaaat 25655615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 30808684 - 30808620
Alignment:
Q  89 taatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||| || ||||||| ||| ||||||| ||||| ||||||||||  ||||||||||||    
T  30808684 taatggtcaaatttaactttcccatggtgggaaacaactctcctttcccattttaaatgccacca 30808620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 34372321 - 34372261
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 254  Q
    ||||| |||||||||||||| |||||| | || ||||||||||| || ||| |||||||||    
T  34372321 gtttaacatgggaaaggggaattgttttcaactatgggaaagttttttttgtccattagat 34372261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 47376900 - 47376852
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||| ||||||||||| |||||||||||||||   |||||||||||    
T  47376900 actttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 25371167 - 25371238
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaa 257  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||| |  || ||||||||||||||||    
T  25371167 agggtggggtttagcatgggaaagtgaacttgtttcccaccatgggaaaatattttttgaccattagatcaa 25371238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 29290120 - 29290173
Alignment:
Q  185 tagggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta 238  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||    
T  29290120 tagggtggggtttagcatggaaatggagagttgtttcccaccatgggaaagtta 29290173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 34035092 - 34035012
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| ||||| ||||||||||| || |||||||||| ||||||||||||||| |  |||||| |||||||| ||||||||    
T  34035092 ggtggagtttaacatgggaaaggagaattgtttcccatcatgggaaagttattttaaaccattggatcaaatagagaacat 34035012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 25067898 - 25067827
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||| || ||| ||||| ||||||||    
T  25067898 ggtggggtttagcatgggaaaggatatttgtttcccaccataggaaagttgtttttgtccattggatcaaat 25067827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 8384066 - 8384024
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgg 230  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  8384066 ggtggggtttagcatgggaaagtggagttgtttcccaccatgg 8384024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 24125986 - 24126024
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttatt 240  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24125986 tgggaaaggggagttgtttcccaccatgggaaagttatt 24126024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 34034174 - 34034248
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||| ||||||||||| || ||| |||||||||||||||||||||| |  |||||| |||||||| ||||||||    
T  34034174 gtttaacatgggaaaggagaattgcttcccaccatgggaaagttattttaaaccattggatcaaatagagaacat 34034248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 28975340 - 28975410
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaa 258  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| |||||| |  || |||||| |||||||    
T  28975340 ggtggggtttagcatgggaaaggagagttgtttcctatcatggaaaagttttatttaaccatttgatcaaa 28975410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 16764925 - 16764974
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||| |||||||||||||||||  ||||||||||||||||||| |||||    
T  16764925 ggtggagtttagcatgggaaaggaaagttgtttcccaccatggggaagtt 16764974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 24126752 - 24126675
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattat 279  Q
    ||||||||||||||||||||||| ||||||||||||  |||| ||  || ||| ||||| |||||||| | |||||||    
T  24126752 tgggaaaggggagttgtttcccatcatgggaaagttgatcttaacttttggattaaatgaagaacatggtattattat 24126675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 16766065 - 16766014
Alignment:
Q  186 agggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 237  Q
    ||||||||||||||||||||||||   |||||||| ||||||||| ||||||    
T  16766065 agggtggggtttagcatgggaaagaaaagttgttttccaccatggaaaagtt 16766014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 28983340 - 28983270
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  28983340 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 28983270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 34717803 - 34717733
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||||||||||||||||    
T  34717803 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgaccattagatcaaa 34717733  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 3543097 - 3543039
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  3543097 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatg 3543039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 22582513 - 22582455
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  22582513 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 22582455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 22587344 - 22587286
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  22587344 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 22587286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 33018450 - 33018392
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  33018450 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 33018392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 33479710 - 33479768
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  33479710 tgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatg 33479768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 33480662 - 33480604
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 260  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  33480662 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 33480604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 7635130 - 7635194
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  7635130 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 7635194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 9574570 - 9574619
Alignment:
Q  103 gactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    |||||||||||| |||||||||| || ||||||||| | |||||||||||    
T  9574570 gactttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 18290537 - 18290473
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  18290537 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 18290473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 21982534 - 21982579
Alignment:
Q  214 gttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    ||||||||| |||||||||||| | || ||||||||||||||||||    
T  21982534 gttgtttccgaccatgggaaagatttttttgaccattagatcaaat 21982579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 23593121 - 23593178
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccatta 251  Q
    |||||||||||||| ||| ||||||||||||  ||||||||||| || ||||| ||||    
T  23593121 gtttagcatgggaatgggaagttgtttcccatgatgggaaagttttttttgactatta 23593178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 24126718 - 24126767
Alignment:
Q  104 actttcctatgatgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||||||||||| |||||||||||||||   ||||||||||||    
T  24126718 actttcccatgatgggaaacaactcccctttcccaaattaaatgccacca 24126767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 10608368 - 10608296
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||||||||||   |||||||||   ||| ||||||||||||||||||||| || ||||||||||||| ||||    
T  10608368 ggtggggtttaatttgggaaaggctggttttttcccaccatgggaaagttagtttttgaccattagattaaat 10608296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 34717242 - 34717313
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaat 259  Q
    |||| |||||||||||||||||   | || ||||||||||||||||||||| || |||| |||||||||||||    
T  34717242 ggtgaggtttagcatgggaaagct-acttttttcccaccatgggaaagttagtttttgatcattagatcaaat 34717313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 579 - 508
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 259  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||||| | | || |||| ||||||||||    
T  579 ggtgggattaagcatgggaaaggggagttgtttcccaccatggaaaagtaaattttaaccactagatcaaat 508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 519 - 579
Alignment:
Q  92 tggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaatgccacc 152  Q
    ||||||||||| ||||| | ||| ||||||| ||||||||||||||||||| ||| |||||    
T  519 tggttaaaatttacttttccatggtgggaaacaactcccctttcccatgcttaatcccacc 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 12882 - 12803
Alignment:
Q  213 agttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaacac 292  Q
    |||||||||||||||||||||||||| | ||||||||||||| || | ||||||||  |||||| ||| || ||||||||    
T  12882 agttgtttcccaccatgggaaagttaattttgaccattagataaactagagaacatacttttatcatagacactcaacac 12803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 12198 - 12287
Alignment:
Q  202 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacatgattttattataaaccctcaaca 291  Q
    |||||||| | ||||||||||||||||| |||| ||| | |||||| |||||| |||| ||||||||  |||||| ||| || |||||||    
T  12198 tgggaaagagaagttgtttcccaccatgagaaaattaattttgaccgttagattaaatagagaacatatttttatcatagacactcaaca 12287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 43266 - 43203
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccatta 251  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||| | |||| |||||||    
T  43266 ggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaagtaaatcttaaccatta 43203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 43200 - 43259
Alignment:
Q  86 atttaatggttaaaattgactttcctatgatgggaaagaactcccctttcccatgctaaa 145  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||||||||| |||| |||||    
T  43200 atttaatggttaagatttactttcccatgatgggaaacaactccccttttccatactaaa 43259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 14012 - 14054
Alignment:
Q  188 ggtggggtttagcatgggaaaggggagttgtttcccaccatgg 230  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14012 ggtgggatttagcatgggaaaggggagttgtttcccaccatgg 14054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 14048 - 14011
Alignment:
Q  116 tgggaaagaactcccctttcccatgctaaatgccacca 153  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  14048 tgggaaacaactcccctttcccatgctaaatcccacca 14011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 11932 - 11886
Alignment:
Q  222 ccaccatgggaaagttattcttgaccattagatcaaatggagaacat 268  Q
    ||||||||||||||||| ||||||||||||||| || | ||||||||    
T  11932 ccaccatgggaaagttaatcttgaccattagattaagtagagaacat 11886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 4139 - 4203
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||||||||||||||||| || || ||||||||||||||    
T  4139 gtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 61580 - 61644
Alignment:
Q  194 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtta-ttcttgaccattagatcaaa 258  Q
    |||||||||||||||||  | || ||||||| ||||||||||||| || |||||||||||||||||    
T  61580 gtttagcatgggaaaggctaatt-tttcccatcatgggaaagttagtttttgaccattagatcaaa 61644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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