View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0178_high_2 (Length: 320)
Name: NF0178_high_2
Description: NF0178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0178_high_2
Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 11 - 297
Target Start/End: Original strand, 32227201 - 32227487
Alignment:
Q
11
atgagatgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcaccact
110
Q
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
32227201
atgaggtgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcaccact
32227300
T
Q
111
tgattttttgggtggatcaatgacaaactactcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattgaggt
210
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
32227301
tgattttttgggtggatcaatgacaaactactcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattgaggt
32227400
T
Q
211
catttctacatatgaagggcactaacatggttactaggaaggtgggttcctccattttggtactgagaaagatgaaagtgtgttttt
297
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
T
32227401
catttctacatatgaagggcactaacatggttactaggaaggtgggttcctccattttggtactaagaaagatgaaagtgtgttttt
32227487
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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