View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0178_low_4 (Length: 320)
Name: NF0178_low_4
Description: NF0178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0178_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 11 - 297
Target Start/End: Original strand, 32227201 - 32227487
Alignment:
| Q |
11 |
atgagatgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcaccact |
110 |
Q |
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| T |
32227201 |
atgaggtgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcaccact |
32227300 |
T |
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| Q |
111 |
tgattttttgggtggatcaatgacaaactactcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattgaggt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32227301 |
tgattttttgggtggatcaatgacaaactactcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattgaggt |
32227400 |
T |
|
| Q |
211 |
catttctacatatgaagggcactaacatggttactaggaaggtgggttcctccattttggtactgagaaagatgaaagtgtgttttt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
32227401 |
catttctacatatgaagggcactaacatggttactaggaaggtgggttcctccattttggtactaagaaagatgaaagtgtgttttt |
32227487 |
T |
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