View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0179_high_7 (Length: 210)
Name: NF0179_high_7
Description: NF0179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0179_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6496266 - 6496070
Alignment:
| Q |
1 |
cacaactgcaattgtagccgcatattttcgttataataaggtgttttgatgtaacatagtaaagggaaaaaggaagtataccatctatagaatcctctaa |
100 |
Q |
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| T |
6496266 |
cacaactgcaattgtagccgcatatttacgttataataaggtgttca-atgtaacatagtaaagggaaaaaggaagta--ccatctatagaatcctctaa |
6496170 |
T |
|
| Q |
101 |
gatgctcattgaggataccagaaaactcaatcaccaaaactccttctccatcaaaaagtgcttcatcaaacaccaagactaatatctcatcctcttcatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
6496169 |
gatgctcattgaggataccagaaaactcaatcaccaaaactccttctccatcaaaaagtgcttcgtcaaacaccaagactaatatctcatcctcttcatc |
6496070 |
T |
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