View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0180-INSERTION-3 (Length: 83)
Name: NF0180-INSERTION-3
Description: NF0180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0180-INSERTION-3 |
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Alignment Details
Target: chr5 (Bit Score: 45; Significance: 3e-17; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 38816931 - 38816975
Alignment:
| Q |
12 |
tgaagatcaaccaatagttttgggtcatcttctttcaccaacaaa |
56 |
Q |
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| T |
38816931 |
tgaagatcaaccaatagttttgggtcatcttctttcaccaacaaa |
38816975 |
T |
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