View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0180_low_18 (Length: 204)
Name: NF0180_low_18
Description: NF0180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0180_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 41517906 - 41517773
Alignment:
| Q |
1 |
cttgcacccccatgaagttgttcttatggatgcttcaggaaactctcttctctctatgcgccgccaaagggtatcatttcctcttcatctttcttatgc- |
99 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41517906 |
cttgcacccccatgaagttgttcttatggatgcttcaggaaactctcttctctctatgcgccgccaaagggtatcatttcctcttcatctttcttatgct |
41517807 |
T |
|
| Q |
100 |
ttttactgctt--agctttgcttgatagtataat |
131 |
Q |
| |
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|||||||| || ||||||||||||||||||||| |
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| T |
41517806 |
ttttactgatttcagctttgcttgatagtataat |
41517773 |
T |
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