View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0180_low_6 (Length: 270)
Name: NF0180_low_6
Description: NF0180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0180_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 4694981 - 4694861
Alignment:
| Q |
35 |
gacatcatcaaccttttctctccttcaccgcctcccaaaccatctcgtcacaatcacgttcacccaattcctcaacctcaacaatctcatcttcaacaac |
134 |
Q |
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| T |
4694981 |
gacatcatcaaccttttctctccttcaccgcctcccaaaccatctcgtcacaatcacgttcacccaattcctcaacctcaacaatcgcatcttcaacaac |
4694882 |
T |
|
| Q |
135 |
cccttgattttcccatacagg |
155 |
Q |
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||||||||||||||||||||| |
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| T |
4694881 |
cccttgattttcccatacagg |
4694861 |
T |
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