View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0181-16-Insertion-7 (Length: 381)
Name: NF0181-16-Insertion-7
Description: NF0181-16
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0181-16-Insertion-7 |
 | |
|
| [»] chr2 (1 HSPs) |
| |
|
| [»] chr5 (14 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 8 - 381
Target Start/End: Original strand, 17924288 - 17924661
Alignment:
| Q |
8 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacataccc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
17924288 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatactc |
17924387 |
T |
|
| Q |
108 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924388 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
17924487 |
T |
|
| Q |
208 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924488 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
17924587 |
T |
|
| Q |
308 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcctccaaatgtaatctctgca |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924588 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcctccaaatgtaatctctgca |
17924661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 305; Significance: 1e-171; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 8 - 368
Target Start/End: Complemental strand, 12906514 - 12906154
Alignment:
| Q |
8 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacataccc |
107 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12906514 |
aatatattctaagcttgtacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattctgcaatattttttaacataccc |
12906415 |
T |
|
| Q |
108 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
207 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
12906414 |
acttctcttggtaaagtaccgctcaaagagttatgtgacaagttcaataagattgataaagaaaacagatttaaaacctctacaggtatggttcctctaa |
12906315 |
T |
|
| Q |
208 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | | |
|
|
| T |
12906314 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaatactaatttaaa |
12906215 |
T |
|
| Q |
308 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcctccaaa |
368 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||||| |||||| | |||||| |
|
|
| T |
12906214 |
caattgactgagattgcctatgaagggtggaatacctccagacaatttgtttccatccaaa |
12906154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 8 - 362
Target Start/End: Complemental strand, 12931603 - 12931249
Alignment:
| Q |
8 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacataccc |
107 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12931603 |
aatatattctaagcttgtacattcaccaatttctctaggaatatcaccagatagatgattctcagagacatctaatgcttcaatattttttaacataccc |
12931504 |
T |
|
| Q |
108 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
207 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12931503 |
acttctcttggtaagctaccacttaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
12931404 |
T |
|
| Q |
208 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
307 |
Q |
| |
|
||||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
12931403 |
gcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggaggaatacttccttgaaacatattatgatttaattctaaataata |
12931304 |
T |
|
| Q |
308 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcc |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12931303 |
caattgactgagattgcctatgaagggtggaatacctcctgacaacttgttttcc |
12931249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 362
Target Start/End: Complemental strand, 12947968 - 12947614
Alignment:
| Q |
8 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacataccc |
107 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12947968 |
aatatattctaagcttgtacattcaccaatttctctaggaatatcaccagatagatgattctcagagacatctaatgcttcaatattttttaacataccc |
12947869 |
T |
|
| Q |
108 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
207 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||| |
|
|
| T |
12947868 |
acttctcttggtaagctaccactcaaagagttatgtgacaagttcaatatctttgataaagaaaaaatatttaaaacttcaacaggtatggttcctctaa |
12947769 |
T |
|
| Q |
208 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
307 |
Q |
| |
|
||||||||||||| |||| ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
12947768 |
gcttattatgagaaagataaagagattgtaaattttgacagtttcctatgcttggaggaatacttccttgaaacatattatgatttaattctaaatcaaa |
12947669 |
T |
|
| Q |
308 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcc |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12947668 |
caattgactgagattgcctatgaagggtggaatacctcctgacaacttgttttcc |
12947614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 8 - 360
Target Start/End: Complemental strand, 12898894 - 12898542
Alignment:
| Q |
8 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacataccc |
107 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
12898894 |
aatatattctatgcttgtacattcaccaatttctatcggaatatcaccagatagatgattcccagagacatctaatcctttaatattttttaacataccc |
12898795 |
T |
|
| Q |
108 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
207 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12898794 |
acttctcttggtaaagtaccgctcaaagagttatgtgacaagttcaataacattgataaagaaaaaagatttaaaacctctgcaggtatggttcctctaa |
12898695 |
T |
|
| Q |
208 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
307 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | |||||||||| | ||||||||||||| ||||||||||||||||||||| ||||| ||| | | | |
|
|
| T |
12898694 |
gcttattatgagaaagatctagatattgtaaatgtagacagtttccaatgcttggaggaatacttccttgaaacatattatgatttaattgtaatttaaa |
12898595 |
T |
|
| Q |
308 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgtttt |
360 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12898594 |
caactgactgagattgcctatgaagggtggaatatctcctgacaacttgtttt |
12898542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 360
Target Start/End: Complemental strand, 12957402 - 12957053
Alignment:
| Q |
8 |
aatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacataccc |
107 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12957402 |
aatatattctaagattgtacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaaatcttcaatattttttaacataccc |
12957303 |
T |
|
| Q |
108 |
acttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaa |
207 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||| || |||| | |||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12957302 |
acttctgttggtaaggtaccgctcaaagagttatgtgacaggtctaatacta---ataatgaaaaaatatttaaaacctctacaggtatggttcctctaa |
12957206 |
T |
|
| Q |
208 |
gcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcata |
307 |
Q |
| |
|
||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | | | |
|
|
| T |
12957205 |
gcttattatgataaagatttagatattgtaaattttgacagtttcctatgcttggaggaatacttccttgaaacatgttatgatctaattctaatttaaa |
12957106 |
T |
|
| Q |
308 |
caattgactgagattgcctatgaagggtggaatatctcctgacaacttgtttt |
360 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12957105 |
caattgactgagattccctatgaacggtggaatatctcctgacaacttgtttt |
12957053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 191; Significance: 1e-103; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 10564348 - 10563978
Alignment:
| Q |
11 |
atattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccact |
110 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||| ||||||||||||| ||||| ||||||||| | ||||| | |
|
|
| T |
10564348 |
atattctaagcttatacattcgccaatttctgtaggaatatcaccagataaatgattcttagagacatctaatatttcaagattttttaagacacccagt |
10564249 |
T |
|
| Q |
111 |
tctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagct |
210 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| | |||||||||| |||||||| ||| ||| | |
|
|
| T |
10564248 |
tctcttggtaagctaccactcaaagagttatgtgacaagttcaataagtttgttaaagaagaaagactaaaaacctctagaggtatggatccattaaatt |
10564149 |
T |
|
| Q |
211 |
tattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaa |
310 |
Q |
| |
|
|||||| ||| |||||||| ||||||||||||||| ||||||| ||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
10564148 |
tattataagaaagatctagtacttgtaaattttgacaatttcctatgctaggaggaatatttccttcaaacatattatgagctaattctaaatcatacaa |
10564049 |
T |
|
| Q |
311 |
ttgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcctccaaatgtaatctctgca |
381 |
Q |
| |
|
||||||||||| ||||| || ||||| ||||| ||||||||||||||| | |||||| |||| |||||| |
|
|
| T |
10564048 |
ctgactgagattacctataaaaggtggcatatcacctgacaacttgtttccacccaaatataatatctgca |
10563978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 89 - 381
Target Start/End: Original strand, 10717864 - 10718156
Alignment:
| Q |
89 |
aatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctct |
188 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||| |
|
|
| T |
10717864 |
aatattttttaacatactcacttctcttggtaagctaccactcaaagagttatgtgacaagtccaatatttttgataaataaaaaagattaaaaacctct |
10717963 |
T |
|
| Q |
189 |
acaggtatggttcctctaagcttattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattat |
288 |
Q |
| |
|
|||||||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
10717964 |
acaggtatggttccactaaacctattatgagaaagatctagatattgtaaattttgacagtttcctatacttggaggaatattcccttgaaacatattaa |
10718063 |
T |
|
| Q |
289 |
gatctaattctaaatcatacaattgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcctccaaatgtaatctctgca |
381 |
Q |
| |
|
| |||||| ||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||| | ||||| ||||| |||||| |
|
|
| T |
10718064 |
gttctaatcgtaaatcaaacaattgactgagatttcctataaagggtggcatatctcctgacaacttgtttccacccaaaagtaatttctgca |
10718156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 45 - 359
Target Start/End: Original strand, 10747937 - 10748251
Alignment:
| Q |
45 |
ggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtg |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
10747937 |
ggaatatcaccagatagatgattctcagagacatctagccaatcaatattttttagtaaacccacttctcttggtaagctaccactcaaaaagttatgtg |
10748036 |
T |
|
| Q |
145 |
acaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagcttattatgagacagatctagatattgtaaattttg |
244 |
Q |
| |
|
| |||||||||||| ||||||||||||||| || |||| |||| |||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
10748037 |
ataagttcaataagtttgataaagaaaaaatatgaaaaatctctgaaggtatggttccactaagcttattatgagaaagatctaggtattgtaacttttg |
10748136 |
T |
|
| Q |
245 |
acagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaattgactgagattgcctatgaagggtggaatatct |
344 |
Q |
| |
|
||| ||| ||| ||||||||||||| ||||||| ||||||||| ||| ||| || || | | ||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
10748137 |
acaattttctatgcttggaggaatatttccttggaacatattacgatataaatccaatttaaacaattgactgagattgcctatgaagggtggtatatat |
10748236 |
T |
|
| Q |
345 |
cctgacaacttgttt |
359 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10748237 |
cctgacaacttgttt |
10748251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 12 - 359
Target Start/End: Original strand, 10741588 - 10741935
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
||||||||| || | |||||||||||| ||| |||||||||||||||||| |||||||||| | ||||| ||||||||||||||||||||||||| |
|
|
| T |
10741588 |
tattctaaggttgtgcattcaccaattgttctaggaatatcaccagatagacgattctcagatagatctagcatgtcaatattttttaacatacccactt |
10741687 |
T |
|
| Q |
112 |
ctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagctt |
211 |
Q |
| |
|
||||||||| | |||||||||||| |||||||||||||| ||||||| ||||||||||| ||||| | |||||||||| |||||||| ||| ||| || |
|
|
| T |
10741688 |
ctcttggtatgctaccactcaaagtgttatgtgacaagtccaataagtttgataaagaagaaagactaaaaacctctagaggtatggatccattaaattt |
10741787 |
T |
|
| Q |
212 |
attatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaat |
311 |
Q |
| |
|
||||| ||| |||||||| ||||||||||||||| ||||||| | | ||||||||| | ||||||||||||||| || |||||| |||||| ||||| |
|
|
| T |
10741788 |
attataagaaagatctagtacttgtaaattttgacaatttcctatggtaggaggaatattcccttgaaacatattaaaatttaattccaaatcaaacaat |
10741887 |
T |
|
| Q |
312 |
tgactgagattgcctatgaagggtggaatatctcctgacaacttgttt |
359 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
10741888 |
tgactaagatttcctataaagggtggtatatctcctgacaacttgttt |
10741935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 12 - 361
Target Start/End: Complemental strand, 10611030 - 10610681
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
|||||||| |||||||||||||||| | ||| |||| || | |||||| ||||||||||| ||||||| | ||||||||||| ||||||||||| |
|
|
| T |
10611030 |
tattctaaacttatacattcaccaactgttctaggaagataagaagatagttgattctcagatacatctagcatattaatattttttagcatacccactt |
10610931 |
T |
|
| Q |
112 |
ctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagctt |
211 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||| |||| ||||| |||||||| ||| ||||| || |
|
|
| T |
10610930 |
ctcttggtaagctaccactcaaagagttatgcgacaagttcaataaatttgataaataaaaaagattaaaaatctctaaaggtatggatccactaagttt |
10610831 |
T |
|
| Q |
212 |
attatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaat |
311 |
Q |
| |
|
||||||||| |||||||| |||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||| | || | || | ||||| |
|
|
| T |
10610830 |
attatgagaaagatctaggtattgtaacttttgacaatttcctatgcttggaggaatatttccttgaaacatgttactgtgtacagccaacctaaacaat |
10610731 |
T |
|
| Q |
312 |
tgactgagattgcctatgaagggtggaatatctcctgacaacttgttttc |
361 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
10610730 |
tgactgagattgcctatgaagggtggtatatatcctgacaacttgttttc |
10610681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 12 - 360
Target Start/End: Original strand, 10764022 - 10764369
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
||||||||| || | |||||||||||| | | ||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||| |
|
|
| T |
10764022 |
tattctaaggttgtgcattcaccaattgttttaggaatatcaccagatagatgattctcagatagatccagcatgtcaatattttttaacatacccactt |
10764121 |
T |
|
| Q |
112 |
ctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaag-atttaaaacctctacaggtatggttcctctaagct |
210 |
Q |
| |
|
||||||||||| ||||||||| | ||||||||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||| ||||||| |
|
|
| T |
10764122 |
ctcttggtaagctaccactca--gttttatgtgacaagttcaatacaattgataaataaaaaaatatgaaaaacctctacaggtatggttccgctaagct |
10764219 |
T |
|
| Q |
211 |
tattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaa |
310 |
Q |
| |
|
| |||| ||| ||||| ||||||||||| |||||||||||||||| ||| ||||||||| |||| |||||||||||| | ||| | || | |||| |
|
|
| T |
10764220 |
tgttatcagaaagatcgagatattgtaacttttgacagtttcctatgctaggaggaatatttccgtgaaacatattaccagttaaagccaatgtaaacaa |
10764319 |
T |
|
| Q |
311 |
ttgactgagattgcctatgaagggtggaatatctcctgacaacttgtttt |
360 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
10764320 |
ttgactgagattgcctatgaagggtggtatatatcctgacaacttgtttt |
10764369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 45 - 359
Target Start/End: Original strand, 10217668 - 10217982
Alignment:
| Q |
45 |
ggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtg |
144 |
Q |
| |
|
|||||||||||| | |||| ||| ||||| ||||||| | |||||||||||| ||| || ||||||||||| ||| |||| |||||| | ||||||| |
|
|
| T |
10217668 |
ggaatatcaccaaacagattattttcagaaacatctagcttaccaatattttttagcatgccaacttctcttggcaagctaccgctcaaaaaattatgtg |
10217767 |
T |
|
| Q |
145 |
acaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagcttattatgagacagatctagatattgtaaattttg |
244 |
Q |
| |
|
|||| | |||||| |||||||| ||||||||||| |||| ||||| |||||| |||||||||||||||| |||| |||| ||||||||||| || ||| |
|
|
| T |
10217768 |
acaactccaataaaattgataaggaaaaaagattaaaaatctctaagggtatgattcctctaagcttattttgagctagatttagatattgtagatgttg |
10217867 |
T |
|
| Q |
245 |
acagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaattgactgagattgcctatgaagggtggaatatct |
344 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| |||||||||||||| ||| || | ||||||||| |||| ||||||||| ||| |||| |||||| |
|
|
| T |
10217868 |
gcagtttcctatgcttggaggaatacttccttcaaacatattatgatgtaaatccagccaatacaattggctgaaattgcctataaagtgtggtatatct |
10217967 |
T |
|
| Q |
345 |
cctgacaacttgttt |
359 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
10217968 |
cctaacaacttgttt |
10217982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 368
Target Start/End: Complemental strand, 7192325 - 7191969
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
|||||||||| ||| ||||| ||||| |||| ||||| |||||||||||| ||||||| |||||||||| | | ||| |||||| ||||||||||| |
|
|
| T |
7192325 |
tattctaagcgtatgcattcgccaatggctctaggaatgtcaccagatagaagattctccgagacatctagcttgttgatactttttagcatacccactt |
7192226 |
T |
|
| Q |
112 |
ctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagctt |
211 |
Q |
| |
|
||||||||| | |||||||||| ||||| ||||||||||| |||| ||||||| ||| ||||| | ||||| |||| ||||||||||||||||| || |
|
|
| T |
7192225 |
ctcttggtaggctaccactcaatgagtttcttgacaagttcagtaagtttgataacgaagaaagactgaaaacttctaagggtatggttcctctaagatt |
7192126 |
T |
|
| Q |
212 |
attatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatcta-attctaaatcatacaa |
310 |
Q |
| |
|
|| || | || || || |||||||| |||| |||||||||| |||| |||||| |||||| |||||||||| ||| | || |||| ||| || |
|
|
| T |
7192125 |
gttttgtgcaaggtccaggtattgtaactttttgcagtttcctatacttgacggaatatttccttctaacatattatctcctacactc-aaatgatataa |
7192027 |
T |
|
| Q |
311 |
ttgactgagattgcctatgaagggtggaatatctcctgacaacttgttttcctccaaa |
368 |
Q |
| |
|
||||||||| |||||||||| |||||| || ||||| || ||||| ||| ||| |||| |
|
|
| T |
7192026 |
ttgactgaggttgcctatgatgggtggtatctctccggaaaacttatttccctgcaaa |
7191969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 10653088 - 10653280
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
||||||||| ||| ||||||||||| ||| ||||| ||||| ||||||| ||| || |||| |||||| || | |||||| ||| ||||||||||| |
|
|
| T |
10653088 |
tattctaagactatgcattcaccaatggttctaggaatctcacctgatagataattatcggagatatctaactcattgatatttcttagcatacccactt |
10653187 |
T |
|
| Q |
112 |
ctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctc |
204 |
Q |
| |
|
|||| |||||| |||||||||| | ||||| |||||| |||| || | ||| || || ||||| |||||||||||| ||||||||||||| |
|
|
| T |
10653188 |
ctctcggtaagctaccactcaatgtgttatttgacaaattcagtatgtttgttagggaggaaagacttaaaacctctatgggtatggttcctc |
10653280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 10604072 - 10603951
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||| || ||| | | |||||| |||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
10604072 |
tattctaagcttatgcattcaccaatagttccaggaatctccccacacaaatgattttcagagacatctaaccaatcaatattttttagcatacccactt |
10603973 |
T |
|
| Q |
112 |
ctcttggtaaggtaccactcaa |
133 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
10603972 |
cttttggtaagctaccactcaa |
10603951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 19606753 - 19607069
Alignment:
| Q |
11 |
atattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccact |
110 |
Q |
| |
|
||||||||||||||| ||||||||||| | | ||| | |||||| || ||||| |||||||||||||| || || || ||| ||||| ||| |
|
|
| T |
19606753 |
atattctaagcttatgcattcaccaatggtttcagaaatgttaccagaaagttgattgtcagagacatctaaggtatctattgttgttagcatactgact |
19606852 |
T |
|
| Q |
111 |
tctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagct |
210 |
Q |
| |
|
||| | |||||| | ||||| || ||||| | |||||| | || ||| ||||||||||| ||||| |||||||||| ||||||||||| ||||| | |
|
|
| T |
19606853 |
tctttcggtaagttgccactgaatgagttttttgacaaatccagtaatattgataaagaggaaagacgaaaaacctctaagggtatggttccactaagat |
19606952 |
T |
|
| Q |
211 |
tattatgagacagatctagatattgtaaattttgacagtttcctaagcttggaggaataattccttgaaacatattatgatctaattctaaatcatacaa |
310 |
Q |
| |
|
|||| ||| | || ||| ||||||| |||||||||||||||| ||||| ||||||| ||||||| | |||||| | | |||| ||| | |||||| |
|
|
| T |
19606953 |
tattttgaaaaaggactatggattgtaacttttgacagtttcctatgcttgaaggaatatttccttgtagcatattttcacctaaacctaggtaatacaa |
19607052 |
T |
|
| Q |
311 |
ttgactgagattgccta |
327 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
19607053 |
ttgactgaggttgccta |
19607069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 10661065 - 10661170
Alignment:
| Q |
103 |
tacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaaaacctctacaggtatggttcc |
202 |
Q |
| |
|
||||||||||| |||||| | |||||||||| ||||| | ||||||||||| |||| ||| |||||| ||||| | || |||| | ||||||||||| |
|
|
| T |
10661065 |
tacccacttctattggtaggctaccactcaatgagttttttgacaagttcagtaagtttgttaaagaggaaagactaaagacctttttgggtatggttcc |
10661164 |
T |
|
| Q |
203 |
tctaag |
208 |
Q |
| |
|
|||||| |
|
|
| T |
10661165 |
tctaag |
10661170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 9837217 - 9837317
Alignment:
| Q |
12 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
111 |
Q |
| |
|
|||||||| ||||| |||||||||||| | | ||||| ||||| || |||||||| ||||||||||||| | | ||||||||||| || |||||||| |
|
|
| T |
9837217 |
tattctaaacttatgcattcaccaattgttattggaatgtcacccgacagatgattttcagagacatctagcttatgaatattttttagcaaacccactt |
9837316 |
T |
|
| Q |
112 |
c |
112 |
Q |
| |
|
| |
|
|
| T |
9837317 |
c |
9837317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 10601125 - 10601054
Alignment:
| Q |
62 |
atgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaa |
133 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||| |||| ||||| |
|
|
| T |
10601125 |
atgattctcagagacatctagccaatcaatattttttagcatacccacttcttttgttaagctacctctcaa |
10601054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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