View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0181_low_11 (Length: 318)
Name: NF0181_low_11
Description: NF0181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0181_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 25520981 - 25520836
Alignment:
| Q |
102 |
agatagaaggtttattctatggtattcttatgaaatatacaaaaaagatgttttatattgcttaaacggtttttatacaaaaataatttgtaacaattgc |
201 |
Q |
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| T |
25520981 |
agatagaaggtttattctatggtattcttatgaaatatacaaaaaagatgttttatattgcttaaacggtttttatacaaaaataatttgtaacaattgc |
25520882 |
T |
|
| Q |
202 |
ctcgggtgtttaagaagcaatttccttacatatattcatctcactc |
247 |
Q |
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| T |
25520881 |
ctcgggtgtttaagaagcaatttccttacatatatccatcccactc |
25520836 |
T |
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