View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0181_low_6 (Length: 332)
Name: NF0181_low_6
Description: NF0181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0181_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 102 - 253
Target Start/End: Complemental strand, 13211143 - 13210992
Alignment:
| Q |
102 |
agaaatgaaacgtaacagcaccttgaagaaccaaagatctaaaaccatcatcaggaaacaccaaaaacgacgcagcaccagcaacaaaagcaggagtata |
201 |
Q |
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| T |
13211143 |
agaaatgaaacgtaacagcaccttgaagaaccaaagatctaaaaccatcatcaggaaacaccaaaaacgacgcagcaccagcaacaaaagcaggagtata |
13211044 |
T |
|
| Q |
202 |
taacaataacataccacttttactcgacaattttatcatcttcttcttcttc |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13211043 |
caacaataacataccacttttactcgacaattttatcatcttcttcttcttc |
13210992 |
T |
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