View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0182_low_15 (Length: 206)
Name: NF0182_low_15
Description: NF0182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0182_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35313167 - 35313028
Alignment:
| Q |
1 |
cctatgaagaagacacaacaaccaacaataaagtaatagcaggaaaaggtgctgttaaatccttagtaattcaatcaaacaaaaacacccttttcagtgc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35313167 |
cctatgaagaagacacaacaaccaacaataaagtaatagcaggaaaaggtgctgttaaatccttagtaattcaatcaaacaaaaacacccttttcagtgc |
35313068 |
T |
|
| Q |
101 |
tcatcaagaccataaaatccgtgtctggaaactaaccaac |
140 |
Q |
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||||||||||| |||||||||||||||||||||||||||| |
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| T |
35313067 |
tcatcaagaccgtaaaatccgtgtctggaaactaaccaac |
35313028 |
T |
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