View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0184_low_1 (Length: 675)

Name: NF0184_low_1
Description: NF0184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0184_low_1
NF0184_low_1
[»] chr2 (25 HSPs)
chr2 (439-675)||(37978693-37978934)
chr2 (4-132)||(37978258-37978386)
chr2 (186-374)||(37978439-37978627)
chr2 (252-364)||(24792000-24792123)
chr2 (252-309)||(24765346-24765403)
chr2 (253-309)||(35022619-35022675)
chr2 (250-309)||(15690209-15690268)
chr2 (252-295)||(24762766-24762809)
chr2 (252-309)||(22440181-22440238)
chr2 (252-309)||(34233960-34234017)
chr2 (256-309)||(39309771-39309824)
chr2 (309-359)||(20555427-20555477)
chr2 (253-309)||(2713465-2713521)
chr2 (308-344)||(13082022-13082058)
chr2 (265-309)||(20128354-20128398)
chr2 (248-295)||(28453247-28453294)
chr2 (251-301)||(3206542-3206592)
chr2 (247-305)||(31017350-31017408)
chr2 (251-309)||(35443530-35443588)
chr2 (253-307)||(41073154-41073208)
chr2 (252-309)||(815007-815064)
chr2 (248-309)||(13081946-13082007)
chr2 (259-316)||(18375080-18375137)
chr2 (252-305)||(20211517-20211570)
chr2 (253-309)||(39445469-39445525)
[»] chr4 (19 HSPs)
chr4 (213-309)||(24981762-24981860)
chr4 (248-309)||(5799024-5799085)
chr4 (240-309)||(11260556-11260625)
chr4 (252-309)||(48315935-48315992)
chr4 (252-372)||(41415716-41415846)
chr4 (253-295)||(13800748-13800790)
chr4 (253-309)||(53391272-53391328)
chr4 (265-309)||(14949025-14949069)
chr4 (253-309)||(31072508-31072564)
chr4 (253-309)||(54552784-54552840)
chr4 (252-309)||(12618732-12618789)
chr4 (312-373)||(54550826-54550887)
chr4 (253-309)||(16555979-16556035)
chr4 (240-300)||(22626646-22626706)
chr4 (312-364)||(32692925-32692977)
chr4 (248-314)||(47461075-47461141)
chr4 (259-316)||(34124549-34124605)
chr4 (265-305)||(12658269-12658309)
chr4 (251-303)||(30624706-30624758)
[»] chr7 (11 HSPs)
chr7 (252-309)||(46726147-46726204)
chr7 (252-309)||(2347428-2347485)
chr7 (253-309)||(47639196-47639252)
chr7 (239-309)||(44543720-44543790)
chr7 (265-309)||(33887890-33887934)
chr7 (253-295)||(18219137-18219179)
chr7 (312-345)||(19559933-19559966)
chr7 (242-307)||(35833787-35833852)
chr7 (248-305)||(36939478-36939535)
chr7 (261-309)||(2959612-2959660)
chr7 (253-293)||(42258904-42258944)
[»] chr3 (12 HSPs)
chr3 (253-309)||(48811406-48811462)
chr3 (253-309)||(4305180-4305236)
chr3 (253-309)||(28874504-28874560)
chr3 (238-305)||(48602240-48602307)
chr3 (239-309)||(38156542-38156611)
chr3 (241-347)||(40425115-40425231)
chr3 (252-309)||(45529157-45529214)
chr3 (251-305)||(25753495-25753549)
chr3 (259-309)||(30463995-30464045)
chr3 (254-295)||(32071127-32071168)
chr3 (312-364)||(34591062-34591114)
chr3 (253-305)||(46093593-46093645)
[»] chr6 (4 HSPs)
chr6 (251-309)||(15588665-15588723)
chr6 (312-348)||(4806492-4806528)
chr6 (253-305)||(6555080-6555132)
chr6 (259-316)||(29408021-29408078)
[»] chr5 (11 HSPs)
chr5 (252-309)||(2827602-2827659)
chr5 (260-305)||(30414270-30414315)
chr5 (273-309)||(27536738-27536774)
chr5 (252-307)||(41583554-41583609)
chr5 (265-316)||(42265460-42265511)
chr5 (243-300)||(4689923-4689981)
chr5 (252-302)||(12198207-12198256)
chr5 (252-309)||(231304-231361)
chr5 (261-301)||(24232399-24232440)
chr5 (265-305)||(8208203-8208243)
chr5 (265-309)||(32017456-32017500)
[»] chr1 (11 HSPs)
chr1 (252-309)||(27542871-27542928)
chr1 (241-309)||(15458421-15458489)
chr1 (253-305)||(26756228-26756280)
chr1 (252-312)||(9534383-9534443)
chr1 (256-307)||(9964379-9964430)
chr1 (255-309)||(43024951-43025005)
chr1 (239-305)||(44829270-44829336)
chr1 (259-316)||(25670802-25670859)
chr1 (241-306)||(26604973-26605038)
chr1 (240-309)||(27004061-27004130)
chr1 (313-365)||(27003996-27004047)
[»] chr8 (14 HSPs)
chr8 (213-303)||(16459213-16459305)
chr8 (252-309)||(24733183-24733240)
chr8 (240-309)||(29217547-29217616)
chr8 (253-296)||(15353821-15353864)
chr8 (248-303)||(17081415-17081470)
chr8 (252-307)||(27734380-27734435)
chr8 (248-295)||(35209984-35210031)
chr8 (252-301)||(8674470-8674519)
chr8 (240-285)||(32959880-32959925)
chr8 (252-309)||(44253818-44253875)
chr8 (241-289)||(167902-167950)
chr8 (252-296)||(7574230-7574274)
chr8 (248-312)||(12234847-12234911)
chr8 (265-309)||(32646843-32646887)
[»] scaffold0003 (1 HSPs)
scaffold0003 (255-305)||(103691-103741)


Alignment Details
Target: chr2 (Bit Score: 182; Significance: 5e-98; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 439 - 675
Target Start/End: Original strand, 37978693 - 37978934
Alignment:
Q  439 tataattaaaatctaaagaagagtatatgtgactcgttaagaaatcgacacatagtcttgtgatgtacatgataaacatatgttctccatccattgaggt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  37978693 tataattaaaatctaaagaagagtatatgtgactcgttaagaagtcgacacataatcttgcgatgtacatgataaacatatgttctccatccattgaggt 37978792  T
Q  539 ggagaagagagaccactt-----aagacatgttgtacaaatgcattaagagatgggtcagatgtaactgattaacaacaactagagagtccattttaaaa 633  Q
    |||||||||||||||| |     |||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37978793 ggagaagagagaccacctcttaaaagagaggttggacaaatgcattaagagatgggttagatgtaactgattaacaacaactagagagtccattttaaaa 37978892  T
Q  634 atgatatttttgatattcaaacgactctcataactattcaat 675  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  37978893 atgatatttttgatattcaaatgactcttataactattcaat 37978934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 37978258 - 37978386
Alignment:
Q  4 gaagaaacaaaggacaaaaaagcttatccacactgtgaagtcgaaaaaaggaaacccaaacctttttgttgtcgatattgtaaggagtcgctgacataat 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37978258 gaagaaaaaaaggacaaaaaagcttatccacactgtgaagtcgaaaaaaggaaacccaaacctttttgttgtcgatattgtaaggagtcgctgacataat 37978357  T
Q  104 gacacgtagagatttgacattcaaaatga 132  Q
    |||||||||||||||||||||||||||||    
T  37978358 gacacgtagagatttgacattcaaaatga 37978386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 186 - 374
Target Start/End: Original strand, 37978439 - 37978627
Alignment:
Q  186 aatgagaaaaagtgttaaatnnnnnnngtcttgttaacgagtgtcctgtgacccttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaat 285  Q
    ||||||||||||||||||||       |||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  37978439 aatgagaaaaagtgttaaataaaaaaagtcttgttaacgagtgtcctgtaacacttttaaagatcccaaatttagaaaatattctttaaaaaagtcaaat 37978538  T
Q  286 attacaaattttaatgcattgattttataaaaacttattattaatggttcttaaagagtgtcctagaagcactcgttaatctttcccat 374  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||  |||||| |||| ||||    
T  37978539 attacaaattttaatgcattggttttataaaaacttactattaatgattcttaaagagtgtcccagaagcatccgttaaccttttccat 37978627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 252 - 364
Target Start/End: Original strand, 24792000 - 24792123
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattga-----------ttttataaaaacttattattaatggttcttaaa 340  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||           ||||||||||||||| |||||||||||||||||    
T  24792000 caaatttagaaaatattctttaaaaaagtcaaatgttacaaattccaatgcattgattacatataatttttataaaaacttactattaatggttcttaaa 24792099  T
Q  341 gagtgtcctagaagcactcgttaa 364  Q
    ||||| |||||  |||||||||||    
T  24792100 gagtgccctaggggcactcgttaa 24792123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 24765346 - 24765403
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||    
T  24765346 caaatttagaaaatattccttaaaaaaatcaaatattacaaattccaatgcattgatt 24765403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 35022619 - 35022675
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  35022619 aaatttaaaaaatatttcttaaaaaagtcaaatattataaattttaatgcattgatt 35022675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 15690268 - 15690209
Alignment:
Q  250 ctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| ||||||||||  | |||||| ||||||||||||||||||||||||||||||    
T  15690268 ctcaaattaagaaaatatttctcaaaaaaatcaaatattacaaattttaatgcattgatt 15690209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 24762809 - 24762766
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaatt 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  24762809 caaatttagaaaatattccttaaaaaagtcaaatattacaaatt 24762766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 22440238 - 22440181
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||||| |||||| |||||| |||||| ||| ||||||||||||    
T  22440238 caaatttagaaaatattcttcaaaaaattcaaatgttacaagtttcaatgcattgatt 22440181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 34234017 - 34233960
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||| |||||||  | |||||||||||||||||||||||| ||||||||||||    
T  34234017 caaatttagtaaatattactcaaaaaagtcaaatattacaaatttcaatgcattgatt 34233960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 39309771 - 39309824
Alignment:
Q  256 tttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||| |||||||    
T  39309771 tttagaaaatattctttaaataagtcaaatatttcaaatttcaatgaattgatt 39309824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 20555477 - 20555427
Alignment:
Q  309 tttataaaaacttattattaatggttcttaaagagtgtcctagaagcactc 359  Q
    |||||||||| |||||||||||||||||||||||||||  |||| ||||||    
T  20555477 tttataaaaagttattattaatggttcttaaagagtgttatagatgcactc 20555427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 2713521 - 2713465
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||| |||||||||||| ||||||||||||| |||||||||  |||||| |||||    
T  2713521 aaatttggaaaatattcttcaaaaaagtcaaatgttacaaattccaatgcaatgatt 2713465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 13082022 - 13082058
Alignment:
Q  308 ttttataaaaacttattattaatggttcttaaagagt 344  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13082022 ttttataaaaacttactattaatggttcttaaagagt 13082058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 20128354 - 20128398
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||    
T  20128354 tattctttaaaaaagtcaaatgttacaaattccaatgcattgatt 20128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 28453247 - 28453294
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaatt 295  Q
    |||| ||||||| |||||||| ||||||||| ||||||||||||||||    
T  28453247 atcttaaatttataaaatattttttaaaaaattcaaatattacaaatt 28453294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 3206542 - 3206592
Alignment:
Q  251 tcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatg 301  Q
    ||||||||| |||||||||  | ||||||||||||||||||||||| ||||    
T  3206542 tcaaatttaaaaaatattcaattaaaaagtcaaatattacaaatttcaatg 3206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 31017408 - 31017350
Alignment:
Q  247 tatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||| ||||||||| || ||||||||||||||||||||||||  || ||| ||||||||    
T  31017408 tatcccaaatttagtaattattctttaaaaaagtcaaatattttaattttcaatgcatt 31017350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 35443588 - 35443530
Alignment:
Q  251 tcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||| ||||||||  | ||||||||||||| ||| ||||||||||||| |||||    
T  35443588 tcaaatttaaaaaatatttctcaaaaaagtcaaatgttataaattttaatgcactgatt 35443530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 41073208 - 41073154
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattga 307  Q
    ||||||||||| |||||||| | ||| |||||||||| |||||| ||||||||||    
T  41073208 aaatttagaaattattctttcagaaaatcaaatattataaatttcaatgcattga 41073154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 815007 - 815064
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||| |||| ||||||||| |||||| | |||||||  ||||||||||||    
T  815007 caaatttagaaattattttttaaaaaaatcaaatgtcacaaattccaatgcattgatt 815064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 13081946 - 13082007
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||| |||||| || |||||||||| || | ||||||||| |||| ||||||||    
T  13081946 atctcaaatttataaaataatcattaaaaaagttaagtgttacaaattctaatacattgatt 13082007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 18375080 - 18375137
Alignment:
Q  259 agaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgattttataaa 316  Q
    ||||| |||||||||||||||||||| | | ||| ||| ||||||||||||| |||||    
T  18375080 agaaattattctttaaaaaagtcaaaaactccaattttcaatgcattgatttcataaa 18375137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 20211570 - 20211517
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||||||| ||||||||||||||| || |||||| |||||||||| ||| ||||    
T  20211570 caaatttaaaaaatattctttaaataaatcaaatgttacaaatttcaatacatt 20211517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 39445525 - 39445469
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| |||||||| ||||||||||| |||| ||| |||||| |||||| |||||    
T  39445525 aaatttaaaaaatattttttaaaaaagttaaatgttagaaatttcaatgcactgatt 39445469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 24981762 - 24981860
Alignment:
Q  213 gtcttgttaacgagtgtcc-tgtgaccctttt-aaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||||||| |||  |||||||||  ||||||||||||    
T  24981762 gtcttgttaacgagtgtccctgagacactttttaaagatttcaaatttagaaaatattctttaaaaaagttaaacgttacaaattcaaatgcattgatt 24981860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 5799085 - 5799024
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  5799085 atcttaaatttagaaaatattcttttaaaaagtcaaatattacaaatttaaatgcgttgatt 5799024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 11260556 - 11260625
Alignment:
Q  240 ttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  11260556 ttttaaacatcttaaatttaaaaaatattctttaaaaaagtcaaatgttacaaatttcaatgcaatgatt 11260625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 48315935 - 48315992
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  48315935 caaattttgaaaatattctttaaaaaagtcaaatgttacaaatttcaatgcattgatt 48315992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 252 - 372
Target Start/End: Complemental strand, 41415846 - 41415716
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt----------ttataaaaacttattattaatggttcttaaag 341  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||  ||||||||||||          ||||||||| ||| ||||||||||||||||||    
T  41415846 caaatatagaaaatattctttaaaaaagtcacaagttacaaattacaatgcattgattaaacaattttttataaaaatttactattaatggttcttaaag 41415747  T
Q  342 agtg-tcctagaagcactcgttaatctttccc 372  Q
    |||| |||||| ||||||||||||| ||||||    
T  41415746 agtgctcctag-agcactcgttaatatttccc 41415716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 13800790 - 13800748
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaatt 295  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13800790 aaatttagaaaatattctttaaaaaagtcaaatattacaaatt 13800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 53391328 - 53391272
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||    
T  53391328 aaatttagaaaatattcttaaaagaagtcaaatgttacaaatttcaatgcattgatt 53391272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 14949069 - 14949025
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    
T  14949069 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgatt 14949025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 31072564 - 31072508
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||||| |||||||||||| |||||||||   |||||||||||    
T  31072564 aaatttagaaaatattctttgaaaaagtcaaatgttacaaattcctatgcattgatt 31072508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 54552840 - 54552784
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| | || ||||||||    
T  54552840 aaatttagaaaatattctttaaaaaggtcaaatgttacaaattcttatacattgatt 54552784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 12618789 - 12618732
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||| |||| ||| |||||||||||| ||| |||||| ||||||||||||    
T  12618789 caaatttagaaattatttttttaaaaagtcaaatgttataaatttcaatgcattgatt 12618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 54550887 - 54550826
Alignment:
Q  312 ataaaaacttattattaatggttcttaaagagtgtcctagaagcactcgttaatctttccca 373  Q
    ||||||| ||| ||||||||| |||||||||||||||   |||||||||||||| |||||||    
T  54550887 ataaaaagttactattaatgggtcttaaagagtgtcccgaaagcactcgttaatatttccca 54550826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 16555979 - 16556035
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||  ||| || | ||||||||||||||||| ||||||||||||    
T  16555979 aaatttagaaaatatttcttacaacattcaaatattacaaatttcaatgcattgatt 16556035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 22626646 - 22626706
Alignment:
Q  240 ttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaat 300  Q
    ||||||||||||||||| || ||| | ||| || ||||||| |||||||||||||||||||    
T  22626646 ttttaaatatctcaaatataaaaattgttcattcaaaaagttaaatattacaaattttaat 22626706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 32692977 - 32692925
Alignment:
Q  312 ataaaaacttattattaatggttcttaaagagtgtcctagaagcactcgttaa 364  Q
    ||||||||||| |||||||||| ||||||||||||||  || |||||||||||    
T  32692977 ataaaaacttactattaatggtccttaaagagtgtcccggaggcactcgttaa 32692925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 47461141 - 47461075
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgattttata 314  Q
    |||||||||||| |||||||| || |||||| | |||||||| |||||| |||| ||||||| ||||    
T  47461141 atctcaaatttaaaaaatattattaaaaaaaattaaatattataaatttcaatgtattgattatata 47461075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 34124605 - 34124549
Alignment:
Q  259 agaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgattttataaa 316  Q
    ||||| |||| ||||||||||||||| ||||||| ||| ||||||||||||| |||||    
T  34124605 agaaattattttttaaaaaagtcaaa-attacaattttcaatgcattgatttcataaa 34124549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 12658269 - 12658309
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  12658269 tattctttaaaaaatttaaatattacaatttttaatgcatt 12658309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 30624706 - 30624758
Alignment:
Q  251 tcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgca 303  Q
    ||||||||  |||||||| |||||||||||||||  |||||||||| ||||||    
T  30624706 tcaaattttaaaaatattgtttaaaaaagtcaaaagttacaaatttcaatgca 30624758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 7e-17; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 46726147 - 46726204
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  46726147 caaatttaaaaaatattctttaaaaaagtcaaatgttacaaatttcaatgcattgatt 46726204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 2347428 - 2347485
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||    
T  2347428 caaatttagtaaatattcctcaaaaaaatcaaatattacaaatttcaatgcattgatt 2347485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 47639196 - 47639252
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||| |||||||    
T  47639196 aaatttaaaaaatattctttaaaaaaattaaatgttacaaattttaatgtattgatt 47639252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 44543720 - 44543790
Alignment:
Q  239 cttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||| || |||||||||||| |||||||||| |||||| ||||||| ||| |||||  ||||||||||||    
T  44543720 ctttttaagatctcaaatttaaaaaatattctataaaaatgtcaaatgttataaattcaaatgcattgatt 44543790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 33887934 - 33887890
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  33887934 tattctttaaaaaagtcaaatatttcaattttcaatgcattgatt 33887890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 18219179 - 18219137
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaatt 295  Q
    ||||||||||| |||||||||||||| |||||||||| |||||    
T  18219179 aaatttagaaattattctttaaaaaactcaaatattataaatt 18219137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 19559966 - 19559933
Alignment:
Q  312 ataaaaacttattattaatggttcttaaagagtg 345  Q
    ||||||||||| ||||||||||||||||||||||    
T  19559966 ataaaaacttactattaatggttcttaaagagtg 19559933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 35833852 - 35833787
Alignment:
Q  242 ttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattga 307  Q
    ||||| ||||||||||||||||  |||  || ||||||||||| ||| ||||||| ||||||||||    
T  35833852 ttaaagatctcaaatttagaaaggatttctttaaaaagtcaaacatttcaaatttcaatgcattga 35833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 36939478 - 36939535
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||| ||||||| ||||||||| | ||||||||||||| |||||||||| | ||||||    
T  36939478 atcttaaatttaaaaaatattcctcaaaaaagtcaaatgttacaaatttcagtgcatt 36939535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 2959660 - 2959612
Alignment:
Q  261 aaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| ||| ||||||| |||| ||| |||||||||||||||||||    
T  2959660 aaaatattttttgaaaaagttaaatgttataaattttaatgcattgatt 2959612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 42258904 - 42258944
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaa 293  Q
    |||||||||||||||||||| ||||||| |||| |||||||    
T  42258904 aaatttagaaaatattcttttaaaaagttaaatgttacaaa 42258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 48811462 - 48811406
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||    
T  48811462 aaatttagaaaatattcattaaaaaagtctaatgttacaaatttcaatgcattgatt 48811406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 4305236 - 4305180
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||||    
T  4305236 aaatttagaatatattttttaaaaaagtcaaatattataaattctaatgtattgatt 4305180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 28874504 - 28874560
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||| ||||||||||||||| |||| |||||||||  ||||||||||||    
T  28874504 aaatttagaaaacattctttaaaaaagtaaaatgttacaaattccaatgcattgatt 28874560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 48602240 - 48602307
Alignment:
Q  238 ccttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    ||||||||  ||| |||||||||||||||||| ||||||||||||||| | |||||||  ||||||||    
T  48602240 ccttttaaggatcacaaatttagaaaatattccttaaaaaagtcaaatgtgacaaattccaatgcatt 48602307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 38156611 - 38156542
Alignment:
Q  239 cttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||  |||| ||||||||||| |||| |||||||| ||||||| |||||||||| ||||||||||||    
T  38156611 cttttaaggatcttaaatttagaaagtattttttaaaaa-gtcaaatgttacaaatttcaatgcattgatt 38156542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 40425115 - 40425231
Alignment:
Q  241 tttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt----------ttataaaaacttattattaat 330  Q
    |||||| ||| |||||||||||||||||  ||||||| || |||| |||||||||  ||| ||||||||          ||||||||||||| |||||||    
T  40425115 tttaaagatcccaaatttagaaaatatttcttaaaaatgttaaatgttacaaattccaatacattgattacaaatttttttataaaaacttactattaat 40425214  T
Q  331 ggttcttaaagagtgtc 347  Q
     ||||||||||||||||    
T  40425215 agttcttaaagagtgtc 40425231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 45529214 - 45529157
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||||| ||||||||||||  |||||| ||| | ||||||||||    
T  45529214 caaatttagaaaatattcttcaaaaaagtcaaacgttacaagtttcagtgcattgatt 45529157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 25753495 - 25753549
Alignment:
Q  251 tcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    ||||||||||||||||||||| || |||||||||| ||| || ||| ||||||||    
T  25753495 tcaaatttagaaaatattcttcaataaagtcaaatgttataagtttcaatgcatt 25753549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 30464045 - 30463995
Alignment:
Q  259 agaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||| |||||| ||||||||||||| ||| ||| ||||||||||||||||    
T  30464045 agaaattattctataaaaaagtcaaacatttcaatttttaatgcattgatt 30463995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 32071127 - 32071168
Alignment:
Q  254 aatttagaaaatattctttaaaaaagtcaaatattacaaatt 295  Q
    |||||||||||||||| |||||||| |||||| |||||||||    
T  32071127 aatttagaaaatattccttaaaaaattcaaatgttacaaatt 32071168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 34591114 - 34591062
Alignment:
Q  312 ataaaaacttattattaatggttcttaaagagtgtcctagaagcactcgttaa 364  Q
    ||||||||||| |||||||||| |||||||||||| | |||  ||||||||||    
T  34591114 ataaaaacttactattaatggtccttaaagagtgttccagagacactcgttaa 34591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 46093645 - 46093593
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||||||| || |||||||||||||||| || |||||||| |||| |||||||    
T  46093645 aaatttagcaattattctttaaaaaagttaactattacaattttttatgcatt 46093593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 15588665 - 15588723
Alignment:
Q  251 tcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||| |||||||||||||||||| | |||| |||||||||| ||||||||||||    
T  15588665 tcaaatttataaaatattctttaaaaaaattaaatgttacaaatttcaatgcattgatt 15588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 4806528 - 4806492
Alignment:
Q  312 ataaaaacttattattaatggttcttaaagagtgtcc 348  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4806528 ataaaaacttactattaatggttcttaaagagtgtcc 4806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 6555132 - 6555080
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||| ||||||||    
T  6555132 aaatttagaaagtattccttaaaaaagtcaaatgttataaatttcaatgcatt 6555080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 29408021 - 29408078
Alignment:
Q  259 agaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgattttataaa 316  Q
    ||||| |||||||||||||||||||| | | ||| || |||||||||||||| |||||    
T  29408021 agaaattattctttaaaaaagtcaaaaactccaatttctaatgcattgatttcataaa 29408078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 2827659 - 2827602
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  2827659 caaatttagaaaatattatttaagaaagtcaaatgttacaagtttcaatgcattgatt 2827602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 30414270 - 30414315
Alignment:
Q  260 gaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  30414270 gaaaatattctttcaaaaaatcaaatattacaaattttaatacatt 30414315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 27536774 - 27536738
Alignment:
Q  273 aaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27536774 aaaaaagtcaaatattacaaatttgaatgcattgatt 27536738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 41583554 - 41583609
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattga 307  Q
    |||||||||||| ||||| || ||||||| ||||||||||||||  ||||||||||    
T  41583554 caaatttagaaattattccttcaaaaagttaaatattacaaattccaatgcattga 41583609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 42265460 - 42265511
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcattgattttataaa 316  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||| |||||    
T  42265460 tattctttaaaaaagtcaaaaatttcaattttcaatgcattgatttcataaa 42265511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 4689923 - 4689981
Alignment:
Q  243 taaatatctcaaatttagaaaata-ttctttaaaaaagtcaaatattacaaattttaat 300  Q
    |||| |||||||||||||||| || ||| ||||||||||||||| |||||| |||||||    
T  4689923 taaaaatctcaaatttagaaagtacttccttaaaaaagtcaaatgttacaatttttaat 4689981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 12198207 - 12198256
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgc 302  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  12198207 caaatttaaaaaatattgtttaaaa-agtcaaatattacaaatttcaatgc 12198256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 231304 - 231361
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||| ||| |||||||||||||||| || ||||  || |||||||||||||||||||    
T  231304 caaatctagtaaatattctttaaaaatgtgaaatgctataaattttaatgcattgatt 231361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 24232440 - 24232399
Alignment:
Q  261 aaaatattctttaaaaaagt-caaatattacaaattttaatg 301  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  24232440 aaaatattctttaaaaaagtacaaatattacaaatttcaatg 24232399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 8208203 - 8208243
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||||||| |||||||||| |||||||| ||||||||||||    
T  8208203 tattcttttaaaaagtcaattattacaatttttaatgcatt 8208243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 32017500 - 32017456
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||    
T  32017500 tattctttaaaaaagtaaaatatttcaattttcaatgcattgatt 32017456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 27542871 - 27542928
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| ||||||||||||||||||||||||||||||| |||  |||| |||||||    
T  27542871 caaatttaaaaaatattctttaaaaaagtcaaatattacatattccaatgtattgatt 27542928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 15458421 - 15458489
Alignment:
Q  241 tttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||| ||||| |||||| ||| |||||||||||||||| |||| ||||||||| |||| ||||||||    
T  15458421 tttaaagatctccaatttaaaaagtattctttaaaaaagttaaatgttacaaattataatacattgatt 15458489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 26756280 - 26756228
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    ||||||| |||||||| |||||||||||||||||||||||| | |||||||||    
T  26756280 aaatttaaaaaatattatttaaaaaagtcaaatattacaaactctaatgcatt 26756228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 9534383 - 9534443
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatttta 312  Q
    |||||||| ||||| || |||||||||||||||||||| |||||| |||||| | ||||||    
T  9534383 caaatttaaaaaatgttatttaaaaaagtcaaatattataaatttcaatgcactaatttta 9534443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 9964430 - 9964379
Alignment:
Q  256 tttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattga 307  Q
    |||||| | |||||||| ||||||| |||||||||||||| |||||||||||    
T  9964430 tttagatattattctttcaaaaagtaaaatattacaaattctaatgcattga 9964379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 43025005 - 43024951
Alignment:
Q  255 atttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||| |||||||| ||||||||| | ||||||||||||||| |||||| |||||    
T  43025005 atttaaaaaatattatttaaaaaaattaaatattacaaatttcaatgcactgatt 43024951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 44829270 - 44829336
Alignment:
Q  239 cttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||||||  ||| ||||||||| || ||||||||||||| ||||| |||||||| ||||||| ||||    
T  44829270 cttttaagcatcccaaatttagtaattattctttaaaaaggtcaactattacaatttttaatacatt 44829336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 25670859 - 25670802
Alignment:
Q  259 agaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgattttataaa 316  Q
    ||||| |||||||||||||||||||| | | ||| ||| ||||||||||||| |||||    
T  25670859 agaaattattctttaaaaaagtcaaaaactccaattttcaatgcattgatttcataaa 25670802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 26605038 - 26604973
Alignment:
Q  241 tttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattg 306  Q
    |||||| || ||||||||| ||| |||||||| ||||||| || |||||||||||| ||| |||||    
T  26605038 tttaaaaatttcaaatttaaaaattattcttttaaaaagtaaattattacaaatttcaatacattg 26604973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 27004130 - 27004061
Alignment:
Q  240 ttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| |||  ||||||| |||||||| ||||||||||| |||| |||  ||||| ||||||||||||    
T  27004130 ttttaaagatcctaaatttaaaaaatattttttaaaaaagttaaatgttatcaatttcaatgcattgatt 27004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 27004047 - 27003996
Alignment:
Q  313 taaaaacttattattaatggttcttaaagagtgtcctagaagcactcgttaat 365  Q
    |||||| |||||||||||| |||||||||||||| || ||| |||||||||||    
T  27004047 taaaaatttattattaatgattcttaaagagtgttct-gaaacactcgttaat 27003996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 16459213 - 16459305
Alignment:
Q  213 gtcttgttaacgagtgtc-ctgtgacccttttaaa-tatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgca 303  Q
    |||||||||||||||||| ||| ||  ||||| || ||| | ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||    
T  16459213 gtcttgttaacgagtgtctctgggatactttttaagtattttaaatttaaaaaatattcttaaaaaaagtcaaatgttacaaatttcaatgca 16459305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 24733183 - 24733240
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| |||||||||| |||||||||||||| |||||||||  | ||||||||||    
T  24733183 caaatttaaaaaatattctctaaaaaagtcaaatgttacaaattacagtgcattgatt 24733240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 29217547 - 29217616
Alignment:
Q  240 ttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    ||||||| || | ||||||||||||||||  ||||||| |||||||||||||||||  |||||| |||||    
T  29217547 ttttaaagattttaaatttagaaaatatttcttaaaaaggtcaaatattacaaattccaatgcagtgatt 29217616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 15353864 - 15353821
Alignment:
Q  253 aaatttagaaaatattctttaaaaaagtcaaatattacaaattt 296  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||    
T  15353864 aaatttataaaatattttttaaaaaagtgaaatattacaaattt 15353821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 17081470 - 17081415
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgca 303  Q
    ||||||||||||| || |||| |||||||||||||| |||||||| || |||||||    
T  17081470 atctcaaatttagcaattattttttaaaaaagtcaactattacaatttctaatgca 17081415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 27734435 - 27734380
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattga 307  Q
    |||||||||||| ||||| || |||||||| |||||||||||||  ||||||||||    
T  27734435 caaatttagaaattattccttcaaaaagtctaatattacaaattccaatgcattga 27734380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 35210031 - 35209984
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaatt 295  Q
    |||||||||||| ||||||||| |||||||||| |||| |||||||||    
T  35210031 atctcaaatttaaaaaatattccttaaaaaagttaaatgttacaaatt 35209984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 8674470 - 8674519
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatg 301  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||| |||||    
T  8674470 caaatttaaaaaatattttttaaaaaagttaaatgttacaaattctaatg 8674519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 32959925 - 32959880
Alignment:
Q  240 ttttaaatatctcaaatttagaaaatattctttaaaaaagtcaaat 285  Q
    ||||||| |||||||||||| || ||||| ||||||||||||||||    
T  32959925 ttttaaagatctcaaatttaaaatatattttttaaaaaagtcaaat 32959880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 44253818 - 44253875
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| |||||||| || ||||||||||||| ||| |||||||||  ||||||||    
T  44253818 caaatttaaaaaatatttttaaaaaaagtcaaatgttataaattttaaatcattgatt 44253875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 167950 - 167902
Alignment:
Q  241 tttaaatatctcaaatttagaaaatattctttaaaaaagtcaaatatta 289  Q
    ||||| ||||||||||||| ||| |||||||| |||||||||| |||||    
T  167950 tttaagtatctcaaatttaaaaattattcttttaaaaagtcaactatta 167902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 7574274 - 7574230
Alignment:
Q  252 caaatttagaaaatattctttaaaaaagtcaaatattacaaattt 296  Q
    |||||||||||||||||  |||||||| |||||| ||||||||||    
T  7574274 caaatttagaaaatatttcttaaaaaaatcaaatgttacaaattt 7574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 12234911 - 12234847
Alignment:
Q  248 atctcaaatttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcattgatttta 312  Q
    |||||||||||| |||||||| |||||| || | |||| |||||||||  ||| |||||||||||    
T  12234911 atctcaaatttaaaaaatattttttaaagaaattaaattttacaaattccaatacattgatttta 12234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 32646843 - 32646887
Alignment:
Q  265 tattctttaaaaaagtcaaatattacaaattttaatgcattgatt 309  Q
    |||||||| |||||||||||||||  || ||||||||||||||||    
T  32646843 tattcttttaaaaagtcaaatattttaatttttaatgcattgatt 32646887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 103741 - 103691
Alignment:
Q  255 atttagaaaatattctttaaaaaagtcaaatattacaaattttaatgcatt 305  Q
    |||||| || |||||||| |||||||| |||||||||| ||||||||||||    
T  103741 atttagtaattattcttttaaaaagtcgaatattacaatttttaatgcatt 103691  T

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