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Query
Query hiting target
Query hiting target's complemental strand
Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0185_low_15 (Length: 250)
Name: NF0185_low_15
Description: NF0185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0185_low_15
[» ] scaffold0385 (1 HSPs)
[» ] scaffold0009 (2 HSPs)
[» ] scaffold0381 (1 HSPs)
[» ] scaffold0057 (1 HSPs)
[» ] scaffold0051 (1 HSPs)
[» ] scaffold0759 (1 HSPs)
Alignment Details
Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 17)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 40587695 - 40587756
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
T
40587695
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatggacat
40587756
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 25346121 - 25346057
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||
T
25346121
ctcaaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattcaatggacat
25346057
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 36776491 - 36776427
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
36776491
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
36776427
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 24054001 - 24053937
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||
T
24054001
ctcaaccaataagtagattaccaaattgccccttataggagcaaaatggtaaattcaagggacat
24053937
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 41973043 - 41972979
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
41973043
ctcaaccaattagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
41972979
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 8760785 - 8760732
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
8760785
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
8760732
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 25836268 - 25836321
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
25836268
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
25836321
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 1942873 - 1942820
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
T
1942873
aaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattca
1942820
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 40616094 - 40616159
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||| |||||||
T
40616094
ctcaaccaattagtagattaccaaattgcctcttataggagcaaaatggtaaattcaagggacatg
40616159
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 32844233 - 32844182
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaatt
91
Q
||||||||||||||||||||||||||||| ||| ||| ||||||||||||||
T
32844233
aaccaataagtagattaccaaattgccccttatcggggcaaaatggtaaatt
32844182
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 8162781 - 8162831
Alignment:
Q
43
caataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
|||||||||||||||||||||| ||| ||||||| ||||||||||||||||
T
8162781
caataagtagattaccaaattgacccttataggggcaaaatggtaaattca
8162831
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 42245732 - 42245789
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||||||||||||||||| |||||| |||| ||||||| ||||||||| |||||||
T
42245732
ctcaaccaataagtagattatcaaattaccccttataggggcaaaatggtgaattcaa
42245789
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 9472238 - 9472175
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||| ||| ||||| | ||||||||||| ||||| ||||||
T
9472238
ctcaaccaataagtagattaccaaattg-cccttatagaggcaaaatggtaatttcaagggacat
9472175
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 45435066 - 45435020
Alignment:
Q
48
agtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
||||||||||||||||||||| |||| || |||||||||||||||||
T
45435066
agtagattaccaaattgccccttataagggcaaaatggtaaattcaa
45435020
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 44389005 - 44389070
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| | |||||||||||||| |||| |||| || |||||||||||||||| |||||||
T
44389005
ctcaaccaattaatagattaccaaattaccccttataagggaaaaatggtaaattcaagggacatg
44389070
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 18378802 - 18378866
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| || ||||||||||||||| |||| | ||||||| ||||||||| ||||||
T
18378802
ctcaaccaataattaatttaccaaattgcccctaatagaggcaaaatgataaattcaaaggacat
18378866
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 25620731 - 25620779
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
||||||||||||||| |||||| |||||| ||||| ||||||||||||
T
25620731
ttaccaaattgcccctcataggggcaaaatagtaaaatcaatggacatg
25620779
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 38894839 - 38894778
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
T
38894839
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatggacat
38894778
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 46626324 - 46626388
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
46626324
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
46626388
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 33075659 - 33075720
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
33075659
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
33075720
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 19322344 - 19322408
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||
T
19322344
ctcaaccaataagtagaataccaaattgccccttataggggcaaaatggtaaattcaagggacat
19322408
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 1826877 - 1826816
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
T
1826877
aaccaataaatagattaccaaattgccccttatagagccaaaatggtaaattcaagggacat
1826816
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 22198910 - 22198971
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||
T
22198910
aaccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaagggacat
22198971
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 47134791 - 47134727
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||
T
47134791
ctcaaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaatggacat
47134727
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 29844884 - 29844934
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||||||| ||||||| |||||||||||||
T
29844884
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaat
29844934
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 10766270 - 10766220
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||| ||| ||||||| |||||||||||||
T
10766270
aaccaataagtagattaccaaattgacccttataggggcaaaatggtaaat
10766220
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 28570806 - 28570756
Alignment:
Q
43
caataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
|||||||||||||||||||||| ||| ||||||| ||||||||||||||||
T
28570806
caataagtagattaccaaattgacccttataggggcaaaatggtaaattca
28570756
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 42678458 - 42678405
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||| ||||||||||| ||||||| |||||||||||||||
T
42678458
aaccaataagtagattatcaaattgccccttatagggataaaatggtaaattca
42678405
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 50557913 - 50557849
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| ||||||||||||||||||||| |||| || |||||||||||||||| |||||||
T
50557913
ctcaaccaattagtagattaccaaattgccccttata-ggacaaaatggtaaattcatgggacatg
50557849
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 16300476 - 16300412
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
16300476
ctcaaccaattagtaatttaccaaattgccccttataggagcaaaatggtaaattcaagggacat
16300412
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 19400818 - 19400753
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| | ||||||||| |||| |||| |||| || ||||||||||||||||| |||||||
T
19400818
ctcaaccaattaatagattaccgaattaccccttatatgggcaaaatggtaaattcaagggacatg
19400753
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 1367378 - 1367314
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
1367378
ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
1367314
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 52306156 - 52306102
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaatt
91
Q
|||||||||| |||| ||| ||||||||||| ||||||| ||||||||||||||
T
52306156
ctcaaccaattagtaatttatcaaattgccccttataggggcaaaatggtaaatt
52306102
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 17364603 - 17364660
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||| ||||||| || ||||||||||||||| |||||| |||||||||||||||||
T
17364603
ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaa
17364660
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 51971272 - 51971336
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| | |||||||||||||| ||| ||||||| ||||||||||| ||||| |||||||
T
51971272
ctcaaccaattaatagattaccaaattaccct-tatagggacaaaatggtaacttcaagggacatg
51971336
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 4890185 - 4890121
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || ||||||||||||||| |||| | ||||||||||||||||| ||||||
T
4890185
ctcagccaataattaatttaccaaattgcccctaatagaggcaaaatggtaaattcaaaggacat
4890121
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 5426303 - 5426239
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||| ||||||||||||||| | || || |||||||||||| |||||||||||
T
5426303
ctcaaccaatttgtaatttaccaaattgccccttctaagggcaaaatggtaaaatcaatggacat
5426239
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 29188300 - 29188364
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || |||||||||||||| |||||| ||||||||||||||||| ||||||
T
29188300
ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacat
29188364
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 33359787 - 33359723
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || |||||||||||||| |||||| ||||||||||||||||| ||||||
T
33359787
ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacat
33359723
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 43116119 - 43116067
Alignment:
Q
53
attaccaaattgccccatatagggccaaaatggtaaattcaatggacatgtat
105
Q
|||||||||||||||| ||||| |||||| | |||||||||||||||||||
T
43116119
attaccaaattgcccctcctaggggcaaaattggaaattcaatggacatgtat
43116067
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 30754496 - 30754432
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
30754496
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaaaggacat
30754432
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 36886968 - 36887032
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
36886968
ctcaatcaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
36887032
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 6305452 - 6305505
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
6305452
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
6305505
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 43138549 - 43138602
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
43138549
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
43138602
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 12422345 - 12422409
Alignment:
Q
38
tcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||
T
12422345
tcaaccaattagtagattaccaaattgccccttataggggcaaaatggtaaaatcaaaggacatg
12422409
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 42977833 - 42977883
Alignment:
Q
38
tcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaa
88
Q
||||||||||||||||||||||||||||||| ||||||| |||||||||||
T
42977833
tcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaa
42977883
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 17643385 - 17643449
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| ||||||||||||||||||| |||| || ||||||| ||||||||| ||||||
T
17643385
ctcaaccaataaatagattaccaaattgccccttataagggcaaaatgataaattcaagggacat
17643449
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 754450 - 754500
Alignment:
Q
43
caataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
|||||||||||||||||||||| ||| ||||||| ||||||||||||||||
T
754450
caataagtagattaccaaattgacccttataggggcaaaatggtaaattca
754500
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 12592471 - 12592524
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
T
12592471
aaccaataagtagattaccaaattgccccttataggggtaaactggtaaattca
12592524
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 3088031 - 3088095
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| | || ||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
3088031
ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaagggacat
3088095
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 25698717 - 25698781
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
25698717
ctcaaccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
25698781
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 30140589 - 30140525
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| |||| |||||||||| ||| |||||| ||||||||||||||||| ||||||
T
30140589
ctcaaccaattagtaatttaccaaattacccttaataggggcaaaatggtaaattcaaaggacat
30140525
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 33709813 - 33709877
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| | || |||||||||||||| ||||||| |||||||||||||||| ||||||
T
33709813
ctcaaccaattactaatttaccaaattgccctttataggggtaaaatggtaaattcaagggacat
33709877
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 41689362 - 41689298
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || |||||||||||||| |||||| ||||||||||||||||| ||||||
T
41689362
ctcagccaataattaatttaccaaattgcccataataggggcaaaatggtaaattcaaaggacat
41689298
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 3757813 - 3757749
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||
T
3757813
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatgaacat
3757749
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 13171712 - 13171648
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
13171712
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
13171648
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 50119957 - 50120021
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
50119957
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
50120021
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 30529278 - 30529335
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
T
30529278
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaa
30529335
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 24547418 - 24547354
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
24547418
ctcaaccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacat
24547354
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 51347574 - 51347511
Alignment:
Q
38
tcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
51347574
tcaaccaataaatagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
51347511
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 8957000 - 8956947
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
8957000
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
8956947
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 8986972 - 8986919
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
8986972
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
8986919
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 37349870 - 37349817
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
37349870
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
37349817
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 36743201 - 36743265
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||| | |||||||||||||| || ||||||
T
36743201
ctcaaccaataagtagattaccaaattgccccttatagagacaaaatggtaaatttaagggacat
36743265
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 53991554 - 53991604
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||||||| ||||||| |||||||||||||
T
53991554
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaat
53991604
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 17730520 - 17730463
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||
T
17730520
ctcaaccaattagtagattaccaaattgccccttataggagcaaaatggtaaattcaa
17730463
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 24948289 - 24948350
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||
T
24948289
aaccaataagtagatttccaaattgccccttataggagcaaaatggtaaattcaaaggacat
24948350
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 29712454 - 29712393
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||| ||||||||||||||||||| ||||||| |||||||||||||| || ||||||
T
29712454
aaccaataaatagattaccaaattgccccttataggggcaaaatggtaaatttaagggacat
29712393
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 3821198 - 3821262
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
3821198
ctcaaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaagggacat
3821262
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 20588649 - 20588585
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||| ||||||||||||||||| ||||| | ||||||||| ||||||| ||||||
T
20588649
ctcaaccaataagtggattaccaaattgccccttatagaggcaaaatggtgaattcaagggacat
20588585
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 578607 - 578657
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||| ||| ||||||| |||||||||||||
T
578607
aaccaataagtagattaccaaattgtcccttataggggcaaaatggtaaat
578657
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 9888895 - 9888945
Alignment:
Q
43
caataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
|||||||||||||||||||||| ||| ||||||| ||||||||||||||||
T
9888895
caataagtagattaccaaattgacccttataggggcaaaatggtaaattca
9888945
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 35716305 - 35716351
Alignment:
Q
44
aataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||| ||||||| |||||||||||||
T
35716305
aataagtagattaccaaattgccccttataggggcaaaatggtaaat
35716351
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 39406234 - 39406288
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||||||||||||||||||||| |||| ||||||| | |||||||||||||||
T
39406234
aaccaataagtagattaccaaattaccccttataggggctaaatggtaaattcaa
39406288
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 39716717 - 39716781
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
39716717
ctcaaccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
39716781
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 5752521 - 5752474
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
5752521
ttaccaaattgccccttataggggcaaaatggtaaattcaagggacat
5752474
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 16896072 - 16896007
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| | ||||||||||||| ||||| |||| || |||||| |||||||||| |||||||
T
16896072
ctcaaccaattaatagattaccaaatagccccttataagggcaaaattgtaaattcaagggacatg
16896007
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 50033764 - 50033712
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||| ||| |||| || ||||||||||||||||
T
50033764
aaccaataagtagattaccaaattg-cccttataagggcaaaatggtaaattca
50033712
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 35833429 - 35833477
Alignment:
Q
53
attaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||| |||||| |||||||||||| |||||||||||
T
35833429
attaccaaattgcccctcataggggcaaaatggtaaaatcaatggacat
35833477
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 12682772 - 12682819
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| |||||| |||||||||||| |||||||||||
T
12682772
ttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacat
12682819
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 15704198 - 15704144
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaatt
91
Q
|||||||||| |||| |||||||||| |||| ||||||| ||||||||||||||
T
15704198
ctcaaccaattagtaatttaccaaatttccccttataggggcaaaatggtaaatt
15704144
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 43021976 - 43021922
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||||||||||||||||||||||| || |||| | ||| |||||||||||||
T
43021976
aaccaataagtagattaccaaattgcacctaatagaggcaagatggtaaattcaa
43021922
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 46104266 - 46104202
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||| ||||||||||||||| || ||| |||||||||||| |||||||||||
T
46104266
ctcaaccaatttgtaatttaccaaattgcccctcattggggcaaaatggtaaaatcaatggacat
46104202
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 29530561 - 29530625
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
29530561
ctcaaccaataagtagattaccaaattgccccttatagggacaaaatggtaaattcaagggacat
29530625
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 19368941 - 19369005
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||
T
19368941
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaaatcaagggacat
19369005
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 28981817 - 28981882
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||
T
28981817
ctcaaccaattagttgattaccaaattgccccttataggggcaaaatggtaaattcaagggacatg
28981882
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 11955528 - 11955578
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||||||| ||||||| |||||||||||||
T
11955528
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaat
11955578
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 35855288 - 35855227
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||| ||||||||||||||||||| ||||||| |||||||||||||| || ||||||
T
35855288
aaccaataaatagattaccaaattgccccttataggggcaaaatggtaaatttaagggacat
35855227
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 8528103 - 8528167
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| || |||||||||||||||| ||||||| || |||||||||||||| ||||||
T
8528103
ctcaaccaataaatatattaccaaattgccccttatagggacagaatggtaaattcaagggacat
8528167
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 26102150 - 26102214
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||| ||||||||||||| || | ||||||| ||||||||||||||||| ||||||
T
26102150
ctcaaccaataagcagattaccaaattacctcttataggggcaaaatggtaaattcaaaggacat
26102214
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 22473724 - 22473678
Alignment:
Q
44
aataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||| ||||||| |||||||||||||
T
22473724
aataagtagattaccaaattgccccttataggggcaaaatggtaaat
22473678
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 40831926 - 40831991
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| ||||||||||| ||||| ||| |||||| ||||||||||||||||| |||||||
T
40831926
ctcaaccaattagtagattaccgaattgtcccttataggagcaaaatggtaaattcaagggacatg
40831991
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 22519276 - 22519212
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| | || |||| |||||||||| ||||||| ||||||||||||||||||||||||
T
22519276
ctcaaccaattaataatttactaaattgccccttataggggcaaaatggtaaattcaatggacat
22519212
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 8393633 - 8393586
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
8393633
ttaccaaattgccccttataggggcaaaatggtaaattcaaaggacat
8393586
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 18682559 - 18682512
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
18682559
ttaccaaattgccccttataggggcaaaatggtaaattcaagggacat
18682512
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 11602164 - 11602229
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| | |||||||| ||||||||| ||||||| |||||||||||| |||| |||||||
T
11602164
ctcaaccaattaatagattactgaattgccccttataggggcaaaatggtaaaatcaacggacatg
11602229
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 19895645 - 19895709
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| | || |||||||||||||| |||| || ||||||||||||||||||||||||
T
19895645
ctcaaccaattactaatttaccaaattgccctttataagggcaaaatggtaaattcaatggacat
19895709
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 4139364 - 4139411
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| |||||| |||||||||||| |||||||||||
T
4139364
ttaccaaattgcccctaatagggacaaaatggtaaaatcaatggacat
4139411
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 26777850 - 26777912
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggac
99
Q
|||||||||| ||| ||||||||||||||| |||||| |||||||||||| |||||||||
T
26777850
ctcaaccaatttgtaatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggac
26777912
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 19486276 - 19486212
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
19486276
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
19486212
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 17837051 - 17836990
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
17837051
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
17836990
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 19486111 - 19486172
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatgga
98
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||
T
19486111
ctcaaccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaatgga
19486172
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 32677186 - 32677247
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
32677186
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
32677247
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 9920912 - 9920962
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||||||| ||||||| |||||||||||||
T
9920912
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaat
9920962
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 10876571 - 10876633
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||
T
10876571
ctcaaccaataagtagattaccaaattgcccc--ttaggggcaaaatggtaaattcaagggacat
10876633
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 28607308 - 28607244
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||
T
28607308
ctcaaccaatttgtaatttaccaaattgccccttatagggacaaaatggtaaattcaatggacat
28607244
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 42781098 - 42781034
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| ||||||||||||||||||| || |||| ||||||| ||||||||| ||||||
T
42781098
ctcaaccaataaatagattaccaaattgccccttacagggacaaaatgataaattcaagggacat
42781034
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 2952844 - 2952780
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
2952844
ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
2952780
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 9545775 - 9545839
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
9545775
ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
9545839
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 10050189 - 10050253
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| |||| ||| ||||||||||| |||||| ||||||||||||||||| ||||||
T
10050189
ctcaaccaattagtaatttatcaaattgcccctaataggggcaaaatggtaaattcaaaggacat
10050253
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 18096558 - 18096514
Alignment:
Q
57
ccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||| |||| ||||||| ||||||||||||||||| ||||||
T
18096558
ccaaattaccccttataggggcaaaatggtaaattcaaaggacat
18096514
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 29467835 - 29467774
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
29467835
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
29467774
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 34872256 - 34872192
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||
T
34872256
ctcaaccaataagtagattaccaaattgccccttatagggacaaaatggtaagttcaaaggacat
34872192
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 35156995 - 35157052
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||
T
35156995
ctcaaccgataagtagattaccaaattgccccttataggggcaaaatggtaaattcaa
35157052
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 44804604 - 44804543
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
44804604
aaccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacat
44804543
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 3791563 - 3791513
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaat
90
Q
||||||||||||||||||||||||||||| ||||||| |||||||||||||
T
3791563
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaat
3791513
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 24684636 - 24684689
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
T
24684636
aaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattca
24684689
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 29684113 - 29684170
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||
T
29684113
ctcaaccaattagtagattaccaaattgccccttataggggtaaaatggtaaattcaa
29684170
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 11840447 - 11840511
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| | || ||||||||||||||| ||||||| ||||||||||||||||||||||||
T
11840447
ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaatggacat
11840511
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 21600970 - 21601034
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| | || ||||||||||||||| ||||||| ||||||||||||||||||||||||
T
21600970
ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaatggacat
21601034
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 39651148 - 39651212
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
39651148
ctcaaccaattagtaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
39651212
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 688133 - 688086
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
688133
ttaccaaattgccccttataggggcaaaatggtaaattcaaaggacat
688086
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 9143563 - 9143506
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||||| ||| |||| ||||||||||||||| ||||||| |||||||||||||||||
T
9143563
ctcaacaaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaa
9143506
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 49146122 - 49146186
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||| ||||||||||||||| |||||| |||||||||||| |||||||||||
T
49146122
ctcaaccaatttgtaatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacat
49146186
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 17169111 - 17169047
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || |||||||||||||| |||||| ||||||||||||||||| ||||||
T
17169111
ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacat
17169047
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 48529933 - 48529997
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || ||||||||||||||| |||||| ||||||||||| ||||| ||||||
T
48529933
ctcagccaataattaatttaccaaattgcccccaataggggcaaaatggtaatttcaaaggacat
48529997
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0385 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0385
Description:
Target: scaffold0385; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 8303 - 8356
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
T
8303
aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca
8356
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 4897497 - 4897558
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
4897497
aaccaataaatagattaccaaattgccccttataggggcaaaatggtaaattcaagggacat
4897558
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 9737752 - 9737816
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||
T
9737752
ctcaaccaataaatagattatcaaattgccccttatagggacaaaatggtaaattcaagggacat
9737816
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 6969312 - 6969359
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||||||||||| ||||||| ||||||||||||||||| ||||||
T
6969312
ttaccaaattgccccttataggggcaaaatggtaaattcaagggacat
6969359
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 25529328 - 25529263
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| ||||||||||||||||||||| |||||| |||||| ||||| ||| |||||||
T
25529328
ctcaaccaattagtagattaccaaattgccccttataggagcaaaatcgtaaaagcaacggacatg
25529263
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 33328277 - 33328342
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| |||||| |||||||||||||| | |||| |||||||||||||| || |||||||
T
33328277
ctcaaccaattagtagactaccaaattgccccttgtaggagcaaaatggtaaatttaaaggacatg
33328342
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 9981259 - 9981323
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| || | ||||||||||||||| ||||||| |||||||||||||||||| ||||
T
9981259
ctcaaccaattagcaatttaccaaattgccccttataggggtaaaatggtaaattcaatgaacat
9981323
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 24444014 - 24443957
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaa
94
Q
|||| ||||||| || ||||||||||||||| |||||| |||||||||||||||||
T
24444014
ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaa
24443957
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 35133260 - 35133196
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacatg
102
Q
|||||||||| ||||||||| |||||||||| ||||| | |||||||||||||| || |||||||
T
35133260
ctcaaccaattagtagattatcaaattgccct-tatagaggcaaaatggtaaatttaaaggacatg
35133196
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 1218605 - 1218541
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || |||||||||||||| |||||| ||||||||||||||||| ||||||
T
1218605
ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacat
1218541
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 4108041 - 4107977
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||| ||||||||||||||| |||||| ||||||||||| |||||||||||
T
4108041
ctcaaccaatttgtaatttaccaaattgcccctcataggggaaaaatggtaaaatcaatggacat
4107977
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 225519 - 225458
Alignment:
Q
40
aaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||
T
225519
aaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaatggacat
225458
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 108633 - 108570
Alignment:
Q
38
tcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||||||||||||||| |||| ||| ||| ||||||||||||||||| ||||||
T
108633
tcaaccaatacgtagattaccaaattaccccttatggggacaaaatggtaaattcaagggacat
108570
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0381 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 9650 - 9600
Alignment:
Q
43
caataagtagattaccaaattgccccatatagggccaaaatggtaaattca
93
Q
|||||||||||||||||||||| ||| ||||||| ||||||||||||||||
T
9650
caataagtagattaccaaattgacccttataggggcaaaatggtaaattca
9600
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0057 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 20579 - 20643
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||| ||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||
T
20579
ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacat
20643
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 62149 - 62085
Alignment:
Q
37
ctcaaccaataagtagattaccaaattgccccatatagggccaaaatggtaaattcaatggacat
101
Q
|||||||||| ||| ||||||||||||||| |||||| |||||||||||| |||||||||||
T
62149
ctcaaccaatttgtaatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacat
62085
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0759 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0759
Description:
Target: scaffold0759; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 5908 - 5947
Alignment:
Q
54
ttaccaaattgccccatatagggccaaaatggtaaattca
93
Q
||||||||||||||| ||||||| ||||||||||||||||
T
5908
ttaccaaattgccccttataggggcaaaatggtaaattca
5947
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
© Oklahoma State University
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