View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0185_low_17 (Length: 241)

Name: NF0185_low_17
Description: NF0185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0185_low_17
NF0185_low_17
[»] chr5 (28 HSPs)
chr5 (1-101)||(12938554-12938654)
chr5 (37-101)||(12952737-12952801)
chr5 (1-101)||(12938598-12938698)
chr5 (37-101)||(32780085-32780149)
chr5 (1-101)||(5820606-5820706)
chr5 (1-101)||(5820650-5820750)
chr5 (1-101)||(6914779-6914879)
chr5 (32-94)||(37371181-37371243)
chr5 (32-101)||(2472428-2472497)
chr5 (37-96)||(37380302-37380361)
chr5 (33-101)||(16802250-16802318)
chr5 (32-96)||(21306645-21306709)
chr5 (32-96)||(21314483-21314547)
chr5 (1-81)||(6914755-6914835)
chr5 (49-101)||(2472379-2472431)
chr5 (1-101)||(1982761-1982861)
chr5 (38-101)||(37380221-37380284)
chr5 (41-101)||(12937838-12937898)
chr5 (41-101)||(12952002-12952062)
chr5 (1-101)||(1982805-1982905)
chr5 (42-101)||(37371106-37371165)
chr5 (98-144)||(37371278-37371323)
chr5 (52-101)||(38477151-38477200)
chr5 (37-96)||(641883-641942)
chr5 (43-101)||(3076993-3077051)
chr5 (32-96)||(19050803-19050867)
chr5 (37-101)||(21306720-21306784)
chr5 (37-101)||(21314558-21314622)
[»] chr7 (37 HSPs)
chr7 (1-101)||(33229456-33229556)
chr7 (1-101)||(8395405-8395505)
chr7 (1-101)||(8439859-8439959)
chr7 (1-101)||(32610733-32610833)
chr7 (1-101)||(33228940-33229040)
chr7 (37-101)||(32610813-32610877)
chr7 (1-101)||(33229500-33229600)
chr7 (1-101)||(35087885-35087985)
chr7 (38-101)||(47810062-47810125)
chr7 (32-101)||(37373657-37373726)
chr7 (40-101)||(40501461-40501522)
chr7 (37-101)||(29754689-29754753)
chr7 (37-101)||(43704657-43704721)
chr7 (37-101)||(43705545-43705609)
chr7 (38-101)||(3699702-3699765)
chr7 (1-101)||(37374685-37374785)
chr7 (32-101)||(6772777-6772846)
chr7 (37-101)||(6773335-6773399)
chr7 (1-82)||(8395380-8395461)
chr7 (37-101)||(47809589-47809653)
chr7 (39-101)||(6772860-6772922)
chr7 (48-101)||(40501378-40501431)
chr7 (1-94)||(8439822-8439915)
chr7 (37-101)||(33228896-33228960)
chr7 (37-101)||(35087400-35087464)
chr7 (37-101)||(35087965-35088029)
chr7 (37-96)||(10338241-10338300)
chr7 (1-101)||(10338280-10338380)
chr7 (32-101)||(29754609-29754677)
chr7 (60-101)||(33296246-33296287)
chr7 (44-96)||(6773403-6773455)
chr7 (37-92)||(33296541-33296596)
chr7 (37-101)||(47810142-47810206)
chr7 (55-101)||(37375115-37375161)
chr7 (54-101)||(47809539-47809586)
chr7 (98-144)||(33229068-33229113)
chr7 (61-101)||(4229145-4229185)
[»] chr6 (15 HSPs)
chr6 (1-101)||(21749769-21749869)
chr6 (37-101)||(21749217-21749281)
chr6 (1-101)||(12203194-12203294)
chr6 (1-101)||(21749725-21749825)
chr6 (37-101)||(8224341-8224405)
chr6 (37-101)||(12202295-12202359)
chr6 (37-101)||(17916392-17916456)
chr6 (1-101)||(17916436-17916536)
chr6 (37-101)||(12203274-12203338)
chr6 (37-101)||(17915758-17915822)
chr6 (32-101)||(5999581-5999650)
chr6 (38-101)||(17915839-17915902)
chr6 (32-101)||(1249036-1249105)
chr6 (62-101)||(33328424-33328463)
chr6 (32-96)||(25138853-25138917)
[»] chr3 (35 HSPs)
chr3 (1-101)||(12106474-12106574)
chr3 (37-101)||(23886246-23886310)
chr3 (1-101)||(12106430-12106530)
chr3 (1-101)||(30432004-30432104)
chr3 (32-101)||(46987374-46987443)
chr3 (1-101)||(7583803-7583903)
chr3 (1-101)||(44384263-44384363)
chr3 (1-101)||(51214133-51214233)
chr3 (6-101)||(51214089-51214184)
chr3 (32-101)||(23886165-23886234)
chr3 (37-101)||(7583759-7583823)
chr3 (37-101)||(30431424-30431488)
chr3 (42-101)||(5810018-5810077)
chr3 (1-101)||(46987418-46987517)
chr3 (43-101)||(30431507-30431565)
chr3 (32-101)||(12105408-12105477)
chr3 (32-101)||(23886824-23886893)
chr3 (7-101)||(51213500-51213594)
chr3 (37-101)||(19283864-19283928)
chr3 (37-101)||(30432084-30432148)
chr3 (37-101)||(46988472-46988536)
chr3 (43-101)||(13041996-13042054)
chr3 (43-101)||(13050073-13050131)
chr3 (39-101)||(30432617-30432679)
chr3 (32-101)||(54109545-54109614)
chr3 (45-101)||(19283783-19283839)
chr3 (38-101)||(13997388-13997451)
chr3 (1-96)||(12105452-12105547)
chr3 (32-101)||(30838391-30838460)
chr3 (37-101)||(7575481-7575545)
chr3 (37-101)||(51213580-51213644)
chr3 (1-85)||(7575417-7575501)
chr3 (1-101)||(23886749-23886849)
chr3 (1-101)||(54109589-54109689)
chr3 (48-96)||(46988398-46988446)
[»] chr1 (34 HSPs)
chr1 (1-101)||(25866639-25866739)
chr1 (1-101)||(20171085-20171185)
chr1 (38-101)||(32824057-32824120)
chr1 (33-101)||(46280770-46280838)
chr1 (1-101)||(47511416-47511516)
chr1 (1-101)||(47511460-47511560)
chr1 (1-101)||(51760132-51760232)
chr1 (1-101)||(51760595-51760695)
chr1 (7-101)||(25866595-25866689)
chr1 (32-101)||(39195004-39195073)
chr1 (37-101)||(20171165-20171229)
chr1 (37-101)||(47512087-47512151)
chr1 (37-101)||(51760088-51760152)
chr1 (37-101)||(51760675-51760739)
chr1 (8-101)||(52371032-52371125)
chr1 (1-101)||(47512007-47512107)
chr1 (39-101)||(27114732-27114794)
chr1 (39-101)||(52371782-52371844)
chr1 (1-144)||(27115348-27115493)
chr1 (42-101)||(20170609-20170668)
chr1 (42-101)||(20170694-20170753)
chr1 (1-101)||(25866003-25866103)
chr1 (38-101)||(27114813-27114876)
chr1 (37-101)||(25866083-25866147)
chr1 (49-101)||(32823507-32823559)
chr1 (37-101)||(32824137-32824201)
chr1 (46-101)||(4388042-4388097)
chr1 (37-101)||(52371112-52371176)
chr1 (43-101)||(28309811-28309869)
chr1 (43-101)||(28309870-28309928)
chr1 (39-101)||(37694702-37694764)
chr1 (98-144)||(51760260-51760306)
chr1 (98-144)||(47511588-47511633)
chr1 (53-101)||(39193630-39193678)
[»] chr4 (24 HSPs)
chr4 (1-101)||(15317795-15317895)
chr4 (1-101)||(26202353-26202453)
chr4 (39-101)||(41690048-41690110)
chr4 (32-101)||(23202363-23202432)
chr4 (37-101)||(23202965-23203029)
chr4 (37-101)||(28509796-28509860)
chr4 (1-101)||(15317751-15317851)
chr4 (1-101)||(23202289-23202388)
chr4 (1-101)||(23202885-23202985)
chr4 (1-101)||(26202309-26202409)
chr4 (1-101)||(28509840-28509940)
chr4 (37-101)||(32508554-32508618)
chr4 (1-101)||(32508474-32508574)
chr4 (38-101)||(32508969-32509032)
chr4 (42-101)||(54319729-54319788)
chr4 (32-101)||(34457497-34457566)
chr4 (32-101)||(41689969-41690038)
chr4 (52-101)||(32508919-32508968)
chr4 (32-101)||(36644864-36644932)
chr4 (43-87)||(34457577-34457621)
chr4 (56-101)||(36645344-36645389)
chr4 (37-101)||(28189300-28189364)
chr4 (37-101)||(36645425-36645489)
chr4 (32-96)||(39135508-39135572)
[»] chr8 (27 HSPs)
chr8 (6-101)||(3271209-3271304)
chr8 (6-101)||(4675850-4675945)
chr8 (1-96)||(30865053-30865148)
chr8 (32-101)||(15989268-15989337)
chr8 (32-101)||(40102880-40102949)
chr8 (37-101)||(30864458-30864522)
chr8 (37-101)||(30865128-30865192)
chr8 (1-101)||(21553631-21553731)
chr8 (1-101)||(15989193-15989293)
chr8 (43-101)||(3612513-3612571)
chr8 (39-101)||(21551971-21552033)
chr8 (39-101)||(21553017-21553079)
chr8 (32-101)||(3272023-3272092)
chr8 (32-101)||(21552047-21552116)
chr8 (32-101)||(21553093-21553162)
chr8 (37-101)||(3271947-3272011)
chr8 (37-101)||(3612586-3612650)
chr8 (37-101)||(15989053-15989117)
chr8 (1-101)||(3271253-3271353)
chr8 (37-96)||(21553711-21553770)
chr8 (37-101)||(40102348-40102412)
chr8 (1-101)||(4675801-4675901)
chr8 (37-101)||(29441665-29441729)
chr8 (98-144)||(3612438-3612485)
chr8 (52-101)||(36022458-36022507)
chr8 (61-101)||(40102965-40103005)
chr8 (1-101)||(40102270-40102368)
[»] chr2 (16 HSPs)
chr2 (32-101)||(43015588-43015657)
chr2 (37-101)||(27262762-27262826)
chr2 (1-101)||(27262806-27262906)
chr2 (32-101)||(42772487-42772556)
chr2 (37-101)||(5435208-5435272)
chr2 (1-101)||(17858507-17858607)
chr2 (42-101)||(27990423-27990482)
chr2 (42-101)||(28076956-28077015)
chr2 (32-101)||(15816664-15816733)
chr2 (37-101)||(17858587-17858651)
chr2 (39-95)||(17859271-17859327)
chr2 (1-101)||(27264540-27264640)
chr2 (37-101)||(11391959-11392023)
chr2 (1-74)||(27264523-27264596)
chr2 (32-101)||(43019244-43019313)
chr2 (52-101)||(15808129-15808178)
[»] scaffold0081 (2 HSPs)
scaffold0081 (1-101)||(1947-2047)
scaffold0081 (37-101)||(1903-1967)
[»] scaffold0839 (2 HSPs)
scaffold0839 (32-101)||(123-192)
scaffold0839 (56-101)||(74-119)
[»] scaffold0007 (4 HSPs)
scaffold0007 (37-101)||(28181-28245)
scaffold0007 (37-101)||(28802-28866)
scaffold0007 (1-101)||(28225-28325)
scaffold0007 (98-144)||(28729-28774)


Alignment Details
Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12938654 - 12938554
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  12938654 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacggtttaaagtta 12938555  T
Q  101 a 101  Q
    |    
T  12938554 a 12938554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 12952737 - 12952801
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  12952737 agaagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacggtttaaagttaa 12952801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12938598 - 12938698
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  12938598 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacagtttaaagtta 12938697  T
Q  101 a 101  Q
    |    
T  12938698 a 12938698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 32780085 - 32780149
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  32780085 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 32780149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5820706 - 5820606
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| |||    
T  5820706 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacgtaggtaaagttatgggaccaaattgagacgatttaaagtta 5820607  T
Q  101 a 101  Q
    |    
T  5820606 a 5820606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5820650 - 5820750
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||    
T  5820650 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaagtta 5820749  T
Q  101 a 101  Q
    |    
T  5820750 a 5820750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6914779 - 6914879
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||    
T  6914779 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacggaggtaaaattatgggaccaaattgagacggtttaaagtta 6914878  T
Q  101 a 101  Q
    |    
T  6914879 a 6914879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 37371181 - 37371243
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggttta 94  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  37371181 ctaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggttta 37371243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 2472428 - 2472497
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  2472428 ctaacagaagggaccacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 2472497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 37380302 - 37380361
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  37380302 agaagggaccacttaggtaaacggaggtaaagttatggtaccaaattgagacgatttaaa 37380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 16802318 - 16802250
Alignment:
Q  33 taatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||| |||| ||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  16802318 taatagaagggactacttgggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 16802250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 21306709 - 21306645
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| ||||||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  21306709 ctaacagaagggactacttaggtaaacggaggtaaagttatgagaccaaattgagacggtttaaa 21306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 21314547 - 21314483
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| ||||||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  21314547 ctaacagaagggactacttaggtaaacggaggtaaagttatgagaccaaattgagacggtttaaa 21314483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6914835 - 6914755
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaa 81  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  6914835 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaa 6914755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 2472431 - 2472379
Alignment:
Q  49 ttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  2472431 ttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 2472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1982861 - 1982761
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||| ||||||||||       |||| |||||||||||||||||||||| |||| ||| |||||| ||||||||||||  ||||||| |||    
T  1982861 tttacctaagtggccccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggcaaaattatgggaccaaattgagatagtttaaagtta 1982762  T
Q  101 a 101  Q
    |    
T  1982761 a 1982761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 37380284 - 37380221
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||| || ||||| |||||| |||||||| |||||||||||| ||||    
T  37380284 gaagggaccacttaggtaaacggaagtaaaattatgggaccaaattaagacggtttaaagttaa 37380221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 12937898 - 12937838
Alignment:
Q  41 gggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||| ||||||| |||| ||||||| || ||||||||||||||||||||| ||||    
T  12937898 gggaccacttgggtaaacggaggcaaagttacgggaccaaattgagacggtttaaagttaa 12937838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 12952062 - 12952002
Alignment:
Q  41 gggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||| ||||||| |||| ||||||| || ||||||||||||||||||||| ||||    
T  12952062 gggaccacttgggtaaacggaggcaaagttacgggaccaaattgagacggtttaaaattaa 12952002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1982805 - 1982905
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||||| |||||||||||||| |||  |||||||||  |||||||| |||||||||||| |||    
T  1982805 tttacctaagtggtcccttctgttagtttttttaacagaaggggccacttaggtaaacggagacaaagttatgagaccaaattaagacggtttaaagtta 1982904  T
Q  101 a 101  Q
    |    
T  1982905 a 1982905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 37371165 - 37371106
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||  |||||| ||||    
T  37371165 ggaccacttaggtaaacggatgtaaagttatgggaccaaattgagacaatttaaagttaa 37371106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 37371278 - 37371323
Alignment:
Q  98 ttaatataccttccaataattttacttttttacatttgactcattag 144  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||    
T  37371278 ttaatataccttccaataattt-atttttttacatttgactcattag 37371323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 38477151 - 38477200
Alignment:
Q  52 ggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||| ||||    
T  38477151 ggtaaacggaggtaaagttattggaccaaattgagacggtttaaagttaa 38477200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 641883 - 641942
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| ||||||||| |||||||||||||| | ||| || ||||||||||||| |||||||    
T  641883 agaaaggaccacttcggtaaacagaggtatacttaggggaccaaattgagacagtttaaa 641942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 3076993 - 3077051
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||| |||||||||||||| | ||| || ||||||||||||| ||||||| ||||    
T  3076993 gaccactttggtaaacagaggtatacttaggggaccaaattgagacagtttaaagttaa 3077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 19050867 - 19050803
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| |||| ||||||||| ||||||| |||||| | ||| || ||||||||||||| |||||||    
T  19050867 ctaacagaaaggaccacttgggtaaacggaggtatacttaggggaccaaattgagacagtttaaa 19050803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 21306720 - 21306784
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||| ||||||| || |||||||||| | || ||| |||||||||||||| ||||    
T  21306720 agaaaggaccactttggtaaacggatgtaaagttataggactaaaatgagacggtttaaagttaa 21306784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 21314558 - 21314622
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||| ||||||| || |||||||||| | || ||| |||||||||||||| ||||    
T  21314558 agaaaggaccactttggtaaacggatgtaaagttataggactaaaatgagacggtttaaagttaa 21314622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33229556 - 33229456
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  33229556 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 33229457  T
Q  101 a 101  Q
    |    
T  33229456 a 33229456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8395405 - 8395505
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||    
T  8395405 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttagataaacggaggtaaagttatggaaccaaattgagatggtttaaagtta 8395504  T
Q  101 a 101  Q
    |    
T  8395505 a 8395505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8439859 - 8439959
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||    
T  8439859 tttaactaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgggactaaattgagacggtttaaagtta 8439958  T
Q  101 a 101  Q
    |    
T  8439959 a 8439959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32610833 - 32610733
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||    
T  32610833 tttacctaagtggtcccttctgttaaaaaaactaacataagggaccacttaggtaaacagaggcaaagttatgggaccaaattgagacggtttaaagtta 32610734  T
Q  101 a 101  Q
    |    
T  32610733 a 32610733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33228940 - 33229040
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  33228940 tttacctaagtggtcccttctgttaaaaaaactaacagaagagaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 33229039  T
Q  101 a 101  Q
    |    
T  33229040 a 33229040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 32610813 - 32610877
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  32610813 agaagggaccacttaggtaaacagaggcaaagttatgggaccaaattgagacggtttaaagttaa 32610877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33229500 - 33229600
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||    
T  33229500 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacagatgtaaagttatggaaccaaattgagatagtttaaaatta 33229599  T
Q  101 a 101  Q
    |    
T  33229600 a 33229600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35087985 - 35087885
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||    
T  35087985 tttacctaagtggtcccttctgttaaaaaaactaacagaagagaccacttaggtaaacggaggtaaaattatgggaccaaattgagacggtttaaagtta 35087886  T
Q  101 a 101  Q
    |    
T  35087885 a 35087885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 47810125 - 47810062
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  47810125 gaagggaccacttaggtaaacagaggtaaaattatgggaccaaattgagacggtttaaagttaa 47810062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 37373657 - 37373726
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  37373657 ctaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacgatttaaagttaa 37373726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 40501461 - 40501522
Alignment:
Q  40 agggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  40501461 agggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaaattaa 40501522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 29754689 - 29754753
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||    
T  29754689 agaagggaccacttaggtaaacggaggtaaaattatggaaccaaattgagacagtttaaagttaa 29754753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 43704721 - 43704657
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||    
T  43704721 agaagggaccacttaggtaaacggaggtaaaattatgggaccaaattgagacggtttaaagttaa 43704657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 43705545 - 43705609
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  43705545 agaagggactacttaggtaaacggaggcaaagttatggaaccaaattgagacggtttaaagttaa 43705609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 3699765 - 3699702
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||    
T  3699765 gaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagatggtttaaagttaa 3699702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37374785 - 37374685
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  |||| |||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||    
T  37374785 tttacctaagtggtcccttctgttaaaaaaactaaccgaagagaccacttaggtaaacggaagtaaagttatgggaccaaattgagacggtttaaagtta 37374686  T
Q  101 a 101  Q
    |    
T  37374685 a 37374685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 6772846 - 6772777
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||| ||||    
T  6772846 ctaacagaagggaccacttaagtaaacggaggtaaaattatgggaccaaattgagacggtttaaagttaa 6772777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 6773399 - 6773335
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  6773399 agaagggaccacttaagtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 6773335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8395461 - 8395380
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaat 82  Q
    ||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||| |||||||||| |||||||    
T  8395461 tttatctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacagaggcaaagttatgggaccaaat 8395380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 47809589 - 47809653
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||| ||||    
T  47809589 agaagggaccacttaggtaaacggaggtaacgttatgggaccaaattgagacagtttaaagttaa 47809653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 6772860 - 6772922
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||| ||||    
T  6772860 aagggaccacttaggtaaacggaggtaaagttgtgggaccaaattgagacagtttaaagttaa 6772922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 40501378 - 40501431
Alignment:
Q  48 cttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  40501378 cttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaaattaa 40501431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8439915 - 8439822
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggttta 94  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||| ||||| || |||||||||||| ||||||||||||| |||||    
T  8439915 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttagttaaacggatgtaaagttatgggaccaaattgagacagttta 8439822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 33228960 - 33228896
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||  ||||||| ||||    
T  33228960 agaagggaccacttaggtaaacggaggtaaaattatgggaccaaattgagatagtttaaaattaa 33228896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 35087400 - 35087464
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||| |||  ||||||| |||||| ||||||||||||||||||||| ||||    
T  35087400 agaagggaccacttaggtgaacgaaggtaaatttatgggaccaaattgagacggtttaaagttaa 35087464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 35087965 - 35088029
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||||||| ||||||| ||||    
T  35087965 agaagggaccacttaggtaaacggaggtaaagttttgggacaaaattgagacagtttaaagttaa 35088029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 10338300 - 10338241
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||||||||| ||||||||||| |||| |||||||||  |||||||||||||||||||||    
T  10338300 agaagggaccgcttaggtaaacggaggcaaagttatgagaccaaattgagacggtttaaa 10338241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10338280 - 10338380
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| ||||| |||||||||||||       |||| |||||| ||||||||||||||  |||| |||||||||| |||||||||||| |||||||| |||    
T  10338280 tttacctaagcggtcccttctgttaaaaaaactaacagaaggaaccacttaggtaaatggaggcaaagttatgggaccaaattgagatggtttaaagtta 10338379  T
Q  101 a 101  Q
    |    
T  10338380 a 10338380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 29754677 - 29754609
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||| | |||||||||| ||||||||||||| | ||||||||||||||||||||| ||||    
T  29754677 ctaacagaagggac-atttaggtaaactgaggtaaagttataggaccaaattgagacggtttaaagttaa 29754609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 33296246 - 33296287
Alignment:
Q  60 gaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  33296246 gaggtaaagttatggaaccaaattgagacggtttaaagttaa 33296287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 6773403 - 6773455
Alignment:
Q  44 accacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||||||| |||||| |||| |||||||||| |||||||||||||||||||||    
T  6773403 accacttaagtaaacggaggcaaagttatgggaccaaattgagacggtttaaa 6773455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 33296541 - 33296596
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtt 92  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||||| ||||||    
T  33296541 agaagggaccacttaantaaacagaggtaaacttatgggaccaaattgaaacggtt 33296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 47810142 - 47810206
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||| |||||||||||| ||||||||||||||| | ||||||||||| ||||||| ||||    
T  47810142 agaatggacaacttaggtaaacggaggtaaagttatgggatcaaattgagacagtttaaagttaa 47810206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 37375115 - 37375161
Alignment:
Q  55 aaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  37375115 aaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 37375161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 47809586 - 47809539
Alignment:
Q  54 taaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  47809586 taaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 47809539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 33229068 - 33229113
Alignment:
Q  98 ttaatataccttccaataattttacttttttacatttgactcattag 144  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  33229068 ttaatataccttccaataatattt-ttttttacatttgactcattag 33229113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 4229185 - 4229145
Alignment:
Q  61 aggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  4229185 aggtaaagttatgagaccaaattgagacggtttaaagttaa 4229145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21749769 - 21749869
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  21749769 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 21749868  T
Q  101 a 101  Q
    |    
T  21749869 a 21749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 21749217 - 21749281
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  21749217 agaagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacggtttaaagttaa 21749281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12203294 - 12203194
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  12203294 tttacctaagtggtcccttctgttaaaaaaactaacagaatggaccacttaggtaaactgaggtaaagttatgggaccaaattgagacggtttaaagtta 12203195  T
Q  101 a 101  Q
    |    
T  12203194 a 12203194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21749825 - 21749725
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| |||    
T  21749825 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacggaggtaaagttatgagaccaaattgagacggtttaaagtta 21749726  T
Q  101 a 101  Q
    |    
T  21749725 a 21749725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 8224341 - 8224405
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||    
T  8224341 agaagggaccacttaggtaaacggagctaaagttatgggaccaaattgagacggtttaaagttaa 8224405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 12202295 - 12202359
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  12202295 agaagggaccacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 12202359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 17916456 - 17916392
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  17916456 agaagggaccacttaggtaaacagaggtaaaattatgtgaccaaattgagacggtttaaagttaa 17916392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17916436 - 17916536
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| ||||||||||||||||| |       |||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||| |||    
T  17916436 tttacctaagtggtcccttctgctaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgtgaccaaattgagacagtttaaagtta 17916535  T
Q  101 a 101  Q
    |    
T  17916536 a 17916536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 12203274 - 12203338
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||| ||||||| ||||    
T  12203274 agaagggaccacttaggtaaacggaggtaaaattatgggaccaaattgagacagtttaaagttaa 12203338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 17915822 - 17915758
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||    
T  17915822 agaagagaccacttaggtaaacggaggtaaagttattggaccaaattgagacggtttaaagttaa 17915758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 5999581 - 5999650
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||| ||| |||||||||| |||| ||| |||||||||||||||||||||||||||| ||||    
T  5999581 ctaacagaaggggccatttaggtaaacggaggcaaaattatggaaccaaattgagacggtttaaagttaa 5999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 17915839 - 17915902
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||| ||||||| ||| ||||||||||  ||||||||||||||||||||| ||||    
T  17915839 gaagggaccacttcggtaaacggagataaagttatgagaccaaattgagacggtttaaagttaa 17915902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 1249105 - 1249036
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||| |||||||||| ||| |||||||||| |||| | |||||||||||||| |||||| ||||    
T  1249105 ctaatagaagagaccacttagataaccagaggtaaaattataggaccaaattgagacgatttaaagttaa 1249036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 33328463 - 33328424
Alignment:
Q  62 ggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  33328463 ggtaaagttatgggaccaaattgagacggtttaaagttaa 33328424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 25138917 - 25138853
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| ||||||||||||||  ||||||||||||| | ||| || ||||| ||||||| |||||||    
T  25138917 ctaacagaagggaccacttcagtaaacagaggtatacttaggggaccaatttgagacagtttaaa 25138853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12106474 - 12106574
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||    
T  12106474 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaagagaggtaaagttatgggaccaaattgagacggtttaaagtta 12106573  T
Q  101 a 101  Q
    |    
T  12106574 a 12106574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 23886246 - 23886310
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23886246 agaagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacggtttaaagttaa 23886310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12106530 - 12106430
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  12106530 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacagaggtaaaattatgggaccaaattgagacggtttaaagtta 12106431  T
Q  101 a 101  Q
    |    
T  12106430 a 12106430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30432104 - 30432004
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  30432104 tttacctaagtggtcccttctgttaaaaaaactaaccgaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 30432005  T
Q  101 a 101  Q
    |    
T  30432004 a 30432004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 46987443 - 46987374
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  46987443 ctaacagaagggaccacttaggtaaagagaggtaaagttatgggaccaaattgagacggtttaaagttaa 46987374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7583803 - 7583903
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||||| |||    
T  7583803 tttacctaagtggtcccttctgttaaaaaaactaacagaatggaccacttaggtaaacggaggtaaagttatggggccaaattgagacggtttaaagtta 7583902  T
Q  101 a 101  Q
    |    
T  7583903 a 7583903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44384263 - 44384363
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    ||||||||||||||||||||||||        ||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||| |||    
T  44384263 tttatctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaagggaggtaaagttatgggaccaaattgagacagtttaaagtta 44384362  T
Q  101 a 101  Q
    |    
T  44384363 a 44384363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51214133 - 51214233
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||| |||    
T  51214133 tttacctaagtggtcccttctgttaaaaaatctaacagaagggaccacttaggtaagcggaggtaaagttatgggaccaaattgagacagtttaaagtta 51214232  T
Q  101 a 101  Q
    |    
T  51214233 a 51214233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 51214184 - 51214089
Alignment:
Q  6 ctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||        ||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||    
T  51214184 ctaagtggtcccttctgttagattttttaacagaagggaccacttaggtaaacagaggtaaagttatgggatcaaattgagacagtttaaagttaa 51214089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 23886234 - 23886165
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  23886234 ctaacagaagggacaacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 23886165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 7583823 - 7583759
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||    
T  7583823 agaagggaccacttaggtaaacggaggtaaagttatgggactaaattgagacggtttaaagttaa 7583759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 30431488 - 30431424
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||    
T  30431488 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaaattaa 30431424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 5810018 - 5810077
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  5810018 ggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 5810077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46987418 - 46987517
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  46987418 tttacctaagtggtcccttctgttagtttttttaacagaaggg-ccacttaggtaaacagaggtaaaattatgggaccaaattgagacggtttaaagtta 46987516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 30431507 - 30431565
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  30431507 gaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 30431565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 12105477 - 12105408
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| ||||    
T  12105477 ctaacagaagggaccacttaggtaaacggaggtaaagttattggaccaaattgagacgctttaaagttaa 12105408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 23886824 - 23886893
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||| ||||    
T  23886824 ctaacagaagggaccacttaggtaaacggaggcaaagttatgggaccaaattgagacgatttaaagttaa 23886893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 51213594 - 51213500
Alignment:
Q  7 taagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||       |||| ||||| ||||||||||||||||  ||| |||||||||| ||||||||||||||||||||| ||||    
T  51213594 taagtggtcccttctgttaaaaaaactaacagaagagaccacttaggtaaacgaaggcaaagttatgggaccaaattgagacggtttaaagttaa 51213500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 19283864 - 19283928
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||| ||||    
T  19283864 agaagggaccacttaggtaaacggatgtaaagttataggaccaaattgagacggtttaaagttaa 19283928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 30432084 - 30432148
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||| ||||    
T  30432084 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagatagtttaaagttaa 30432148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 46988472 - 46988536
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||| ||||    
T  46988472 agaagggaccacttaggtaaacggaggtaaagttattggaccaagttgagacggtttaaagttaa 46988536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 13042054 - 13041996
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  13042054 gaccacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 13041996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 13050131 - 13050073
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  13050131 gaccacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 13050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 30432617 - 30432679
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||| ||||    
T  30432617 aagggaccacttagataaacggaggtaaagttatgggaccaaattgaaacggtttaaagttaa 30432679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 54109614 - 54109545
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||||||||||  |||||||||||| | |||||||||||||| |||||| ||||    
T  54109614 ctaacagaagggaccacttaggtaaacgcaggtaaagttataggaccaaattgagacgatttaaagttaa 54109545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 19283839 - 19283783
Alignment:
Q  45 ccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||||||| ||||    
T  19283839 ccacttaggtaaacagaggcaaagttatgggactaaattgagacggtttaaagttaa 19283783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 13997388 - 13997451
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||| ||||||  |||||||||||||| ||||| ||||||||||||||| ||||    
T  13997388 gaagggaccacttatgtaaacgaaggtaaagttatgggaccaagttgagacggtttaaagttaa 13997451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12105452 - 12105547
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| |||||||||||||||||||        ||| ||||||| || |||||||||||  ||| |||||||||| |||||||||||||||||||||    
T  12105452 tttacctaagtggtcccttctgttagtttttttaacagaaggggccgcttaggtaaacgaaggcaaagttatgggaccaaattgagacggtttaaa 12105547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 30838460 - 30838391
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||| ||||||||||||||||||||  ||||||||| | || |||||||||||||||||| ||||    
T  30838460 ctaacagaatggaccacttaggtaaacagaactaaagttataggactaaattgagacggtttaaagttaa 30838391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 7575481 - 7575545
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||| |||| ||||  |||||||| |||||||||||| ||||    
T  7575481 agaagggaccacttaggtaaacggaggcaaaggtatgagaccaaattaagacggtttaaagttaa 7575545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 51213580 - 51213644
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||| |||||| |||  |||||||||| |||||||||||| |||||||| ||||    
T  51213580 agaagggaccacttacgtaaacggagacaaagttatgggaccaaattgagatggtttaaagttaa 51213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7575501 - 7575417
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattga 85  Q
    |||| |||||||||||||||||||       |||| |||||| ||||||||||||||| |||| |||||||||| || |||||||    
T  7575501 tttacctaagtggtcccttctgttaaaaaaactaacagaaggaaccacttaggtaaacggaggcaaagttatgggactaaattga 7575417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23886849 - 23886749
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||| ||||||| ||||||||| |||| |||||||||| |||||||||||||  |||||| |||    
T  23886849 tttacctaagtggtcccttctgttagtttttttaacagaatggaccacctaggtaaacggaggcaaagttatgggaccaaattgagacattttaaagtta 23886750  T
Q  101 a 101  Q
    |    
T  23886749 a 23886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 54109589 - 54109689
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| | ||| |||||||||||||||| ||||||||||||||  |||||||||||||  |||||| |||    
T  54109589 tttacctaagtggtcccttctgttagtttttttaacaaaagagaccacttaggtaaacggaggtaaagttatgagaccaaattgagacaatttaaagtta 54109688  T
Q  101 a 101  Q
    |    
T  54109689 a 54109689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 46988446 - 46988398
Alignment:
Q  48 cttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||||||||||  ||| |||||||||| |||||||||||||||||||||    
T  46988446 cttaggtaaacgaaggcaaagttatgggaccaaattgagacggtttaaa 46988398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25866639 - 25866739
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  25866639 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaagtaaacagaggtaaagttatgggaccaaattgagacggtttaaagtta 25866738  T
Q  101 a 101  Q
    |    
T  25866739 a 25866739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20171185 - 20171085
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  20171185 tttacctaagtggtcccttctgttaaaaaaactaactgaagggaccacttaagtaaacagaggtaaagttatgggaccaaattgagacggtttaaagtta 20171086  T
Q  101 a 101  Q
    |    
T  20171085 a 20171085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 32824120 - 32824057
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  32824120 gaagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacggtttaaagttaa 32824057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 46280770 - 46280838
Alignment:
Q  33 taatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||    
T  46280770 taatagaagggaccacttaggtaaacggaggtaaagttatgggatcaaattgagacggtttaaaattaa 46280838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47511516 - 47511416
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||    
T  47511516 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaaatta 47511417  T
Q  101 a 101  Q
    |    
T  47511416 a 47511416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47511460 - 47511560
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||| |||    
T  47511460 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagctataggaccaaattgagacggtttaaagtta 47511559  T
Q  101 a 101  Q
    |    
T  47511560 a 47511560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51760132 - 51760232
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    ||||||||||||||||||||||||       |||| |||| ||||| |||||||||||||||||| |||||||| |||||||||| |||||||||| |||    
T  51760132 tttatctaagtggtcccttctgttaaaaaaactaacagaaaggaccgcttaggtaaacagaggtatagttatgggaccaaattgatacggtttaaagtta 51760231  T
Q  101 a 101  Q
    |    
T  51760232 a 51760232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 51760695 - 51760595
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |||    
T  51760695 tttacctaagtggtcccttctgttaaaaaaactaaccgaagggaccacttaggtaaacggagataaagttatgggaccaaattgagacggtttaaagtta 51760596  T
Q  101 a 101  Q
    |    
T  51760595 a 51760595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 25866689 - 25866595
Alignment:
Q  7 taagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||        ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||    
T  25866689 taagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaagttaa 25866595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 39195004 - 39195073
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| ||||    
T  39195004 ctaacagaagggaccacttaggtaaacagaggtaaagttatgagatcaaattgagacggtttaaagttaa 39195073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 20171165 - 20171229
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||    
T  20171165 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaagttaa 20171229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 47512087 - 47512151
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||    
T  47512087 agaagggaccacttaggtaaacagaggtaaagttatgagaccaaattgagacagtttaaagttaa 47512151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 51760152 - 51760088
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  51760152 agaagggaccacttagataaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 51760088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 51760675 - 51760739
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||    
T  51760675 agaagggaccacttaggtaaacggtggtaaagttatgggaccaaattgagacggtttaaagttaa 51760739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 52371125 - 52371032
Alignment:
Q  8 aagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||       |||| ||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  52371125 aagtggtcccttctgttaaaaaaactaacagaagggactacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 52371032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47512107 - 47512007
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  ||| ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| |||    
T  47512107 tttacctaagtggtcccttctgttaaaaaaactaaccgaatggaccacttaggtaaacggaggtaaagttatgagaccaaattgagacggtttaaagtta 47512008  T
Q  101 a 101  Q
    |    
T  47512007 a 47512007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 27114794 - 27114732
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  27114794 aagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacgatttaaaattaa 27114732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 52371844 - 52371782
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||    
T  52371844 aagggaccacttaggtaaacggaggtaaagttatgggactaaattgagacggtttaaagttaa 52371782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 27115493 - 27115348
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggttta-----a 95  Q
    |||| ||||||||||| |||||||       |||| |||||||||||||||||||||  ||||||||||||||| |||||| ||| |   ||||     |    
T  27115493 tttacctaagtggtccattctgttaaaaaaactaacagaagggaccacttaggtaaaaggaggtaaagttatgggaccaaaatgaaa---tttaaaaata 27115397  T
Q  96 atttaatataccttccaataattttacttttttacatttgactcattag 144  Q
    | |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  27115396 agttaatataccatccaataattttttttttttacatttgactcattag 27115348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 20170668 - 20170609
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  20170668 ggaccaattaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 20170609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 20170694 - 20170753
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||    
T  20170694 ggaccacttaggtaaacggagataaagttatggaaccaaattaagacggtttaaagttaa 20170753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25866103 - 25866003
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||||||| |||||||||||||||||  | ||||||||| || |||||||||| |||||||||| |||    
T  25866103 tttacctaagtggtcccttctgttaaaaaaactaatagaaaggaccacttaggtaaacgaatgtaaagttacgggaccaaattgaaacggtttaaagtta 25866004  T
Q  101 a 101  Q
    |    
T  25866003 a 25866003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 27114813 - 27114876
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||| ||||    
T  27114813 gaagggaccacttaggtaaatggaggtaaagttatgagaccaaattgagacggtttaaagttaa 27114876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 25866083 - 25866147
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||  ||| |||||| ||||||||||||||||||||| ||||    
T  25866083 agaagggaccacttaggtaaacggagacaaaattatgggaccaaattgagacggtttaaagttaa 25866147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 32823559 - 32823507
Alignment:
Q  49 ttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  32823559 ttaggtaaacagaggtaaagttatgggaccaaattgagacagtttaaagttaa 32823507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 32824137 - 32824201
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||| |||||||||| ||| ||||||||||  ||||||||||||||||||||| ||||    
T  32824137 agaagggaccatttaggtaaacggagataaagttatgagaccaaattgagacggtttaaagttaa 32824201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 4388097 - 4388042
Alignment:
Q  46 cacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  4388097 cacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 4388042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 52371112 - 52371176
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||| |||||||  ||| ||||||| || ||||||||||||||||||||| ||||    
T  52371112 agaagggaccacttgggtaaacgcaggcaaagttacgggaccaaattgagacggtttaaagttaa 52371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 28309869 - 28309811
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||  ||| |||||||||  ||||||||||||||||||||| ||||    
T  28309869 gaccacttaggtaaacgaaggcaaagttatgagaccaaattgagacggtttaaagttaa 28309811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 28309870 - 28309928
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||  ||| |||||||||  ||||||||||||||||||||| ||||    
T  28309870 gaccacttaggtaaacgaaggcaaagttatgagaccaaattgagacggtttaaagttaa 28309928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 37694764 - 37694702
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| || ||||||| ||||    
T  37694764 aagggaccacttaggtaaacggaagtaaagttatgggatcaaattgaaacagtttaaagttaa 37694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 51760260 - 51760306
Alignment:
Q  98 ttaatataccttccaataattttacttttttacatttgactcattag 144  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  51760260 ttaatataccttccaataatttttttttattacatttgactcattag 51760306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 47511588 - 47511633
Alignment:
Q  98 ttaatataccttccaataattttacttttttacatttgactcattag 144  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||    
T  47511588 ttaatataccttccaatatttttt-ttttttacatttgactcattag 47511633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 39193678 - 39193630
Alignment:
Q  53 gtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||| ||||||||||||||| | ||||||||||| ||||||| ||||    
T  39193678 gtaaacggaggtaaagttatgggatcaaattgagacagtttaaagttaa 39193630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15317795 - 15317895
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||| ||||       |||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||    
T  15317795 tttacctaagtggtcccttatgttaaaaaaactaacagaagggaccacttaggtaaacagaggtaaagttatcggaccaaattgagacggtttaaagtta 15317894  T
Q  101 a 101  Q
    |    
T  15317895 a 15317895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26202353 - 26202453
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||    
T  26202353 tttacctaagtggtcccttctgttagtttttttaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaagtta 26202452  T
Q  101 a 101  Q
    |    
T  26202453 a 26202453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 41690048 - 41690110
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  41690048 aagggaccacttaggtaaacataggtaaagttatgggaccaaattgagacggtttaaagttaa 41690110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 23202363 - 23202432
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||    
T  23202363 ctaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaactgagacggtttaaagttaa 23202432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 23202965 - 23203029
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  23202965 agaagggacgacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 23203029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 28509860 - 28509796
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||    
T  28509860 agaagggaccacttaggtaaacggaggtaaagttatgggaccgaattgagacggtttaaagttaa 28509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15317851 - 15317751
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||| |||    
T  15317851 tttacctaagtggtcccttctgttagtttttttaacataagggaccacttaggtaaacggaggtaaagttatggaaacaaattgagacagtttaaagtta 15317752  T
Q  101 a 101  Q
    |    
T  15317751 a 15317751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23202388 - 23202289
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  23202388 tttacctaagtggtcccttctgttagtttttttaacagaagggac-acttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 23202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23202985 - 23202885
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||| ||||||||||||       |||| |||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||    
T  23202985 tttacctaagtcgtcccttctgttaaaaaaactaacagaatggaccacttaggtaaacggaggtaaagttatgggaccaaatttagacggtttaaagtta 23202886  T
Q  101 a 101  Q
    |    
T  23202885 a 23202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26202409 - 26202309
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| |||||||||||||||||||||| |||||||| |||||| |  |||||||||||||||||| |||    
T  26202409 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaaattatgggattaaattgagacggtttaaagtta 26202310  T
Q  101 a 101  Q
    |    
T  26202309 a 26202309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28509840 - 28509940
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  ||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||| |||    
T  28509840 tttacctaagtggtcccttctgttaaaaaaactaaccgaagggaccacttaggtaaatgaaggtaaagttatgggaccaaattgagacggtttaaagtta 28509939  T
Q  101 a 101  Q
    |    
T  28509940 a 28509940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 32508554 - 32508618
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||| ||||    
T  32508554 agaagggaccacttaggtaaattgaggtaaagttatgggaccaaattgagacgatttaaagttaa 32508618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32508574 - 32508474
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||||||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||| |||    
T  32508574 tttacctaagtggtcccttctgttggtttttttaacagaagggaccactaaggtaaacggaggtaaagttatgggatcaaattgagacagtttaaagtta 32508475  T
Q  101 a 101  Q
    |    
T  32508474 a 32508474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 32508969 - 32509032
Alignment:
Q  38 gaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||| ||||    
T  32508969 gaagggaccacttagataaacggaggtaaagttatgggatcaaattgagacggtttaaagttaa 32509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 54319729 - 54319788
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||    
T  54319729 ggaccacttaggtaaacggaggtaaagttatgagaccaaattgagacggtttaaaattaa 54319788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 34457566 - 34457497
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| |||||||| |||| ||||||| ||||    
T  34457566 ctaacagaagggaccacttagataaacggaggtaaagttatgggaccaaattaagacagtttaaagttaa 34457497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 41690038 - 41689969
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||| |||||  |||||||||||| | ||||||||||||||||||||| ||||    
T  41690038 ctaacagaagggaccacttagataaacgtaggtaaagttatcggaccaaattgagacggtttaaagttaa 41689969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 32508968 - 32508919
Alignment:
Q  52 ggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  32508968 ggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 32508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 36644864 - 36644932
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||| ||||| ||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  36644864 ctaatcgaaggaaccacttagataa-cagaggtaaagttatgggaccaacttgagacggtttaaagttaa 36644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 34457577 - 34457621
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgaga 87  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  34457577 gaccacttaggtaaacggaggtaaagttatgggaccaaattgaga 34457621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 36645389 - 36645344
Alignment:
Q  56 aacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||    
T  36645389 aacagaggtaaagttatggggccaaattgagacggtttaaagttaa 36645344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 28189300 - 28189364
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||| |||||||||||||||  |||||||| |||||| |||||||||| ||| |||||| ||||    
T  28189300 agaagagaccacttaggtaaatggaggtaaaattatgggaccaaattgaaacgatttaaagttaa 28189364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 36645425 - 36645489
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||| |||||| ||| |||| |||||| |||||||||||| | |||||| ||||    
T  36645425 agaatggaccacttaagtaaacggagataaaattatgggaccaaattgagatgatttaaagttaa 36645489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 39135508 - 39135572
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| |||| ||||||||| ||||||| |||||| | ||| || ||||||||||||| |||||||    
T  39135508 ctaacagaaaggaccacttgggtaaacggaggtatacttaggggaccaaattgagacagtttaaa 39135572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 3271304 - 3271209
Alignment:
Q  6 ctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  3271304 ctaagtggtcccttctgttagtttttttaatagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacgatttaaagttaa 3271209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 4675850 - 4675945
Alignment:
Q  6 ctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||| |||||||||||       |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  4675850 ctaagtgatcccttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 4675945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30865148 - 30865053
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||| |||||||||||||||||||       |||| | |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  30865148 tttacctaagtggtcccttctgttaaaaaaactaacacaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaa 30865053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 15989268 - 15989337
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  15989268 ctaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 15989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 40102949 - 40102880
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  40102949 ctaacagaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 40102880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 30864458 - 30864522
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  30864458 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaaattaa 30864522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 30865128 - 30865192
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  30865128 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 30865192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21553731 - 21553631
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  21553731 tttacctaagtggtcccttctgttaaaaaaactaaccgtagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 21553632  T
Q  101 a 101  Q
    |    
T  21553631 a 21553631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15989293 - 15989193
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  15989293 tttacctaagtggtcccttctgttagtttttttaacagaaggaaccatttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 15989194  T
Q  101 a 101  Q
    |    
T  15989193 a 15989193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 3612571 - 3612513
Alignment:
Q  43 gaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  3612571 gaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 3612513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 21552033 - 21551971
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||    
T  21552033 aagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagatagtttaaagttaa 21551971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 21553079 - 21553017
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||    
T  21553079 aagggaccacttaggtaaacagaggtaaagttatgggaccaaattgagatagtttaaagttaa 21553017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 3272023 - 3272092
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||    
T  3272023 ctaacagaagggaccacttaggtaaacggaggcaaagttatgggacaaaattgagacggtttaaagttaa 3272092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 21552047 - 21552116
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||||||||||  |||||||||||||| | ||||||||||||||||||| ||||    
T  21552047 ctaacagaagggaccacttaggtaaacgtaggtaaagttatgggatcaaattgagacggtttaaagttaa 21552116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 21553093 - 21553162
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||||||||||  |||||||||||||| | ||||||||||||||||||| ||||    
T  21553093 ctaacagaagggaccacttaggtaaacgtaggtaaagttatgggatcaaattgagacggtttaaagttaa 21553162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 3272011 - 3271947
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  3272011 agaagggatcacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaaattaa 3271947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 3612586 - 3612650
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||  |||||| ||||    
T  3612586 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacaatttaaagttaa 3612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 15989117 - 15989053
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  15989117 agaagggatcacttaggtaaacggaggcaaagttatgggaccaaattgagacggtttaaagttaa 15989053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3271253 - 3271353
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||| ||       |||| |||||||||||||||||| ||| | ||||||||||| | ||||||||||||||||||||| |||    
T  3271253 tttacctaagtggtcccttctattaaaaaaactaacagaagggaccacttaggtgaacgggggtaaagttatcggaccaaattgagacggtttaaagtta 3271352  T
Q  101 a 101  Q
    |    
T  3271353 a 3271353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 21553711 - 21553770
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaa 96  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  21553711 agaagggaccacttaggtaaacggaggtaaagatatgggaccaaattgagacgatttaaa 21553770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 40102348 - 40102412
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||| |||||||||| || ||||||||| |||||||| ||||    
T  40102348 agaagggaccacttaggtaaacggaggcaaagttatgggactaaattgagatggtttaaagttaa 40102412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4675901 - 4675801
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| |||||||| ||||||||||| | ||||||||||||||| |||||||||||||  |||||| |||    
T  4675901 tttacctaagtggtcccttctgttagtttttttaacagaagggatcacttaggtaagcggaggtaaagttatgggaccaaattgagacaatttaaagtta 4675802  T
Q  101 a 101  Q
    |    
T  4675801 a 4675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 29441729 - 29441665
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||| |||||||||| ||||||||||||||| |  |||||||||| ||||||| ||||    
T  29441729 agaagggaccatttaggtaaacggaggtaaagttatgggattaaattgagacagtttaaagttaa 29441665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 3612485 - 3612438
Alignment:
Q  98 ttaatataccttccaataattttactttttt-acatttgactcattag 144  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  3612485 ttaatataccttccaataattttatttttttgacatttgactcattag 3612438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 36022458 - 36022507
Alignment:
Q  52 ggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| ||||    
T  36022458 ggtaaacagaggtaaagttatgagatcaaattgagacggtttaaagttaa 36022507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 40102965 - 40103005
Alignment:
Q  61 aggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  40102965 aggtaaagttatgggaccaaattgagacggtttaaagttaa 40103005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40102368 - 40102270
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||||||||| ||||||||||  ||  |||||||||| |||||||||||| |||||||| |||    
T  40102368 tttacctaagtggtcccttctgttaaaaaa-ctaacagaagggacca-ttaggtaaacgaagacaaagttatgggaccaaattgagatggtttaaagtta 40102271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 43015657 - 43015588
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  43015657 ctaatagaaaggaccacttaggtaaacagaggtaaagttatgggaccaaattgagacagtttaaagttaa 43015588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 27262826 - 27262762
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  27262826 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 27262762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27262806 - 27262906
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| |||    
T  27262806 tttacctaagtggtcccttctgttaaaaaaactaaccgaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgatacggtttaaagtta 27262905  T
Q  101 a 101  Q
    |    
T  27262906 a 27262906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 42772556 - 42772487
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  42772556 ctaacagaagggatcacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagttaa 42772487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 5435272 - 5435208
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||    
T  5435272 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacagtttaaagttaa 5435208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17858607 - 17858507
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       |||| ||||||||||| |||||||||| |||| |||||||| | ||||||||||||||||||||| |||    
T  17858607 tttacctaagtggtcccttctgttaaaaaaactaacagaagggaccatttaggtaaacggaggcaaagttattggaccaaattgagacggtttaaagtta 17858508  T
Q  101 a 101  Q
    |    
T  17858507 a 17858507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 27990482 - 27990423
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  27990482 ggaccacttaggtaaactgaggtaaagttatgggaccaaattaagacggtttaaatttaa 27990423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 28077015 - 28076956
Alignment:
Q  42 ggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  28077015 ggaccacttaggtaaactgaggtaaagttatgggaccaaattaagacggtttaaatttaa 28076956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 15816664 - 15816733
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||    
T  15816664 ctaacagaagggatcacttaggtaaatagaggtaaagttatgggaccaaattgagacagtttaaagttaa 15816733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 17858587 - 17858651
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||| ||||    
T  17858587 agaagggaccacttaggtaaacggagacaaagttatgggaccaaattgagacggtttaaagttaa 17858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 17859271 - 17859327
Alignment:
Q  39 aagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaa 95  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  17859271 aagggaccacttaggtaaacaaaggtaaagttatgggaccaaattgagacagtttaa 17859327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27264540 - 27264640
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||        ||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||  |||||| |||    
T  27264540 tttacctaagtggtcccttctgttagtttttttaacagaagagaccacttaggtaaacggaggtaaagttatgggaccaaattgagacaatttaaagtta 27264639  T
Q  101 a 101  Q
    |    
T  27264640 a 27264640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 11391959 - 11392023
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    ||||||||| |||||||||||| |||| |||||||| | | ||||||||||||||||||| ||||    
T  11391959 agaagggacaacttaggtaaacggaggcaaagttataggatcaaattgagacggtttaaagttaa 11392023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27264596 - 27264523
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatgg 74  Q
    |||| |||||||||| ||||||||       |||| |||||||||||||||||||||| |||||||||||||||    
T  27264596 tttacctaagtggtctcttctgttaaaaaaactaacagaagggaccacttaggtaaacggaggtaaagttatgg 27264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 43019244 - 43019313
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| |||||||||||  |||||||||  |||||||||||||| ||||||||||||| | ||||| ||||    
T  43019244 ctaacagaagggaccaactaggtaaacgaaggtaaagttatgggaccaaattgagacaggttaaagttaa 43019313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 15808178 - 15808129
Alignment:
Q  52 ggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||| |||||| ||||||||||||  ||||||| ||||    
T  15808178 ggtaaacagaggtaaaattatgggaccaaattgagatagtttaaagttaa 15808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1947 - 2047
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  1947 tttacctaagtggtcccttctgttaaaaaaactaaccgaacggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacggtttaaagtta 2046  T
Q  101 a 101  Q
    |    
T  2047 a 2047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 1967 - 1903
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||    
T  1967 agaagggaccacttaggtaaacggaggtaaagttttgggaccaaattgagacggtttaaagttaa 1903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 123 - 192
Alignment:
Q  32 ctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||| ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| ||||    
T  123 ctaacagaagggaccacttaggtaaacagaggcaaagttatgcgaccaaattgagacggtttaaaattaa 192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 119 - 74
Alignment:
Q  56 aacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||    
T  119 aacagaggcaaagttatgggaccaaattgagacggtttaaaattaa 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 28245 - 28181
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  28245 agaagggaccacttaggtaaacggaggtaaagttatgggaccaaattgagacgttttaaagttaa 28181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 28866 - 28802
Alignment:
Q  37 agaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaatttaa 101  Q
    |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| ||||    
T  28866 agaagggaccacttaggtaaacggatgtaaagttatgggaccaaattgagacggtttaaagttaa 28802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28225 - 28325
Alignment:
Q  1 tttatctaagtggtcccttctgttnnnnnnnctaatagaagggaccacttaggtaaacagaggtaaagttatggaaccaaattgagacggtttaaattta 100  Q
    |||| |||||||||||||||||||       ||||  |||||||||||||||||||||||||||| |||||||  |||||||||||||| |||||| |||    
T  28225 tttacctaagtggtcccttctgttaaaaaaactaaccgaagggaccacttaggtaaacagaggtagagttatgagaccaaattgagacgatttaaagtta 28324  T
Q  101 a 101  Q
    |    
T  28325 a 28325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 28774 - 28729
Alignment:
Q  98 ttaatataccttccaataattttacttttttacatttgactcattag 144  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  28774 ttaatatactttccaataattt-atttttttacatttgactcattag 28729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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