View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0185_low_28 (Length: 203)
Name: NF0185_low_28
Description: NF0185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0185_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 7950878 - 7950722
Alignment:
| Q |
12 |
aacaaaaatagatcatattatatagaagaaacttttatcaatatcatatattaaggcattctagaagaataatcaccaaatggctcgcaaagcaaacatt |
111 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7950878 |
aacaaaaatagagcatattatatagaagaaacttttatcaatatcatatattaaggcattctagaagaataatcaccaaatggctcgcaaagcaaacatt |
7950779 |
T |
|
| Q |
112 |
tattataatcctaccagatatctaagaaatctaaaggaagatttttatttgaagtat |
168 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7950778 |
tattataatcctaccagatatctaagaaatctaaaggaagatttttatttaaagtat |
7950722 |
T |
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