View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0185_low_29 (Length: 202)
Name: NF0185_low_29
Description: NF0185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0185_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29847737 - 29847850
Alignment:
| Q |
1 |
ggatgtttggttgttaaggaggacaattgaaacttaagcttgcaactaactttttattggggaacatgattttaaacaacggttaaggttacgatgcaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |
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| T |
29847737 |
ggatgtttggttgttaaggaggacaattgaaacttaagcttgcaactaacttgttattggggaacatgattttaaaccaccgttaaggttacgatgcaaa |
29847836 |
T |
|
| Q |
101 |
cttttatattgcag |
114 |
Q |
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|||||||||||||| |
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| T |
29847837 |
cttttatattgcag |
29847850 |
T |
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