View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0188-INSERTION4 (Length: 422)

Name: NF0188-INSERTION4
Description: NF0188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0188-INSERTION4
NF0188-INSERTION4
[»] chr6 (21 HSPs)
chr6 (252-422)||(4311020-4311190)
chr6 (51-137)||(26668496-26668582)
chr6 (41-96)||(24881739-24881794)
chr6 (51-137)||(23633308-23633394)
chr6 (51-137)||(28647420-28647506)
chr6 (51-137)||(28965825-28965911)
chr6 (69-137)||(25924867-25924935)
chr6 (77-137)||(27102115-27102175)
chr6 (77-137)||(27143937-27143997)
chr6 (61-137)||(32253780-32253856)
chr6 (51-142)||(19789061-19789152)
chr6 (72-142)||(12044327-12044397)
chr6 (51-137)||(32457237-32457323)
chr6 (52-137)||(3821378-3821463)
chr6 (72-137)||(16743272-16743337)
chr6 (267-320)||(24126652-24126705)
chr6 (61-142)||(29383552-29383633)
chr6 (69-137)||(237401-237469)
chr6 (69-137)||(15364658-15364726)
chr6 (74-137)||(17182099-17182163)
chr6 (72-136)||(27612876-27612940)
[»] chr2 (42 HSPs)
chr2 (34-222)||(45372391-45372579)
chr2 (246-422)||(30486773-30486949)
chr2 (51-138)||(3091740-3091827)
chr2 (50-137)||(41353481-41353568)
chr2 (51-137)||(12600048-12600134)
chr2 (51-137)||(38021356-38021442)
chr2 (72-137)||(34372847-34372912)
chr2 (51-138)||(29893609-29893696)
chr2 (51-137)||(1298194-1298280)
chr2 (51-137)||(1889147-1889233)
chr2 (51-137)||(32688529-32688615)
chr2 (51-136)||(33030087-33030173)
chr2 (47-137)||(35171207-35171297)
chr2 (72-137)||(8352835-8352900)
chr2 (72-137)||(34139044-34139109)
chr2 (72-137)||(36816422-36816487)
chr2 (138-223)||(45376648-45376733)
chr2 (69-137)||(6851662-6851730)
chr2 (72-136)||(9202522-9202586)
chr2 (70-137)||(9695065-9695132)
chr2 (51-137)||(6365186-6365272)
chr2 (51-137)||(6884910-6884996)
chr2 (75-137)||(10288150-10288212)
chr2 (75-137)||(13553147-13553209)
chr2 (72-138)||(17917388-17917454)
chr2 (61-137)||(23045093-23045166)
chr2 (51-137)||(27540015-27540101)
chr2 (51-105)||(33857249-33857303)
chr2 (72-138)||(36587474-36587540)
chr2 (51-137)||(44484641-44484727)
chr2 (72-137)||(7497997-7498062)
chr2 (72-137)||(10749685-10749750)
chr2 (71-136)||(26321870-26321935)
chr2 (77-134)||(29192662-29192719)
chr2 (72-137)||(36180503-36180568)
chr2 (72-105)||(40326159-40326192)
chr2 (77-137)||(40358122-40358183)
chr2 (69-137)||(3299108-3299176)
chr2 (74-137)||(12784406-12784470)
chr2 (61-137)||(13711061-13711137)
chr2 (72-136)||(26321703-26321767)
chr2 (61-137)||(34442113-34442189)
[»] chr5 (29 HSPs)
chr5 (251-353)||(33685790-33685892)
chr5 (51-137)||(31006059-31006145)
chr5 (69-137)||(41192587-41192655)
chr5 (51-134)||(17489351-17489434)
chr5 (73-137)||(35464590-35464654)
chr5 (51-133)||(3154628-3154710)
chr5 (51-137)||(27340869-27340955)
chr5 (69-103)||(35972608-35972642)
chr5 (51-137)||(36548365-36548451)
chr5 (61-105)||(19827369-19827413)
chr5 (50-133)||(36786242-36786325)
chr5 (75-137)||(582876-582938)
chr5 (72-137)||(6940155-6940221)
chr5 (51-137)||(9714121-9714207)
chr5 (51-137)||(12349781-12349867)
chr5 (51-137)||(26685691-26685777)
chr5 (51-137)||(26955422-26955508)
chr5 (51-137)||(31708370-31708456)
chr5 (75-137)||(36581474-36581536)
chr5 (72-137)||(2456026-2456091)
chr5 (72-137)||(5996667-5996732)
chr5 (72-137)||(6538870-6538935)
chr5 (51-104)||(14206422-14206475)
chr5 (72-105)||(39191840-39191873)
chr5 (51-143)||(22920477-22920569)
chr5 (75-135)||(24431627-24431687)
chr5 (72-115)||(32912060-32912104)
chr5 (51-139)||(38010870-38010958)
chr5 (61-137)||(38500943-38501019)
[»] chr7 (35 HSPs)
chr7 (61-142)||(7990074-7990155)
chr7 (41-137)||(42060656-42060752)
chr7 (69-134)||(1789994-1790059)
chr7 (42-137)||(16567316-16567409)
chr7 (42-137)||(16598253-16598346)
chr7 (51-134)||(30862641-30862722)
chr7 (70-136)||(10014959-10015025)
chr7 (72-137)||(18111617-18111683)
chr7 (51-137)||(33881690-33881776)
chr7 (72-134)||(34304684-34304746)
chr7 (72-137)||(26153646-26153710)
chr7 (72-137)||(31364890-31364955)
chr7 (51-108)||(47424970-47425027)
chr7 (34-105)||(35590749-35590818)
chr7 (61-137)||(46651672-46651748)
chr7 (34-137)||(2414077-2414180)
chr7 (79-137)||(31487190-31487249)
chr7 (75-142)||(42276086-42276153)
chr7 (51-134)||(47644708-47644791)
chr7 (51-105)||(2790209-2790263)
chr7 (51-105)||(16645664-16645718)
chr7 (51-105)||(17620025-17620079)
chr7 (51-137)||(19426580-19426666)
chr7 (75-137)||(23329902-23329964)
chr7 (50-136)||(27688937-27689023)
chr7 (72-138)||(28081788-28081854)
chr7 (75-105)||(40507161-40507191)
chr7 (51-133)||(43255552-43255634)
chr7 (72-137)||(18157191-18157256)
chr7 (51-116)||(30447381-30447446)
chr7 (72-137)||(38023430-38023495)
chr7 (72-137)||(43079638-43079703)
chr7 (72-136)||(17039158-17039222)
chr7 (34-105)||(29034133-29034202)
chr7 (72-136)||(34349033-34349097)
[»] chr8 (45 HSPs)
chr8 (51-147)||(29509256-29509352)
chr8 (51-137)||(10344324-10344410)
chr8 (51-137)||(42047335-42047421)
chr8 (51-108)||(14029228-14029285)
chr8 (34-134)||(14228710-14228810)
chr8 (34-137)||(26294189-26294290)
chr8 (34-137)||(26307446-26307547)
chr8 (54-138)||(29913563-29913647)
chr8 (74-137)||(42012598-42012661)
chr8 (51-137)||(27630897-27630983)
chr8 (51-137)||(36064030-36064116)
chr8 (72-137)||(10184132-10184197)
chr8 (34-107)||(44672187-44672260)
chr8 (74-142)||(20852914-20852982)
chr8 (69-137)||(38504170-38504238)
chr8 (69-137)||(43587641-43587709)
chr8 (71-134)||(11089579-11089642)
chr8 (51-134)||(12697698-12697781)
chr8 (51-106)||(20683552-20683607)
chr8 (71-137)||(22960421-22960488)
chr8 (52-107)||(40997687-40997742)
chr8 (74-136)||(34494646-34494708)
chr8 (51-137)||(41304967-41305053)
chr8 (72-146)||(42716311-42716385)
chr8 (69-135)||(43186298-43186364)
chr8 (72-137)||(6004944-6005009)
chr8 (71-104)||(7010707-7010740)
chr8 (72-105)||(9738699-9738732)
chr8 (72-137)||(14548829-14548894)
chr8 (72-137)||(20473779-20473844)
chr8 (72-137)||(22767132-22767197)
chr8 (72-137)||(32725786-32725851)
chr8 (72-137)||(33863254-33863319)
chr8 (69-118)||(35595229-35595278)
chr8 (51-148)||(36497650-36497747)
chr8 (52-105)||(40608545-40608598)
chr8 (72-144)||(42786665-42786738)
chr8 (72-137)||(44090887-44090952)
chr8 (72-137)||(44711978-44712043)
chr8 (54-137)||(2768147-2768228)
chr8 (77-137)||(3950110-3950170)
chr8 (69-137)||(5924810-5924878)
chr8 (68-108)||(20065645-20065685)
chr8 (34-142)||(28623079-28623187)
chr8 (70-130)||(39359743-39359803)
[»] scaffold0119 (1 HSPs)
scaffold0119 (51-137)||(2211-2297)
[»] chr1 (41 HSPs)
chr1 (51-137)||(43755663-43755749)
chr1 (69-137)||(49699755-49699823)
chr1 (72-118)||(37515935-37515981)
chr1 (51-137)||(45042261-45042347)
chr1 (72-137)||(27563484-27563549)
chr1 (50-142)||(43056711-43056803)
chr1 (51-137)||(37843417-37843503)
chr1 (69-142)||(43196092-43196165)
chr1 (72-137)||(49596235-49596300)
chr1 (61-137)||(366657-366733)
chr1 (266-328)||(41882228-41882292)
chr1 (42-137)||(51250253-51250346)
chr1 (79-146)||(52283712-52283780)
chr1 (42-137)||(3919300-3919395)
chr1 (72-107)||(32196668-32196703)
chr1 (54-137)||(32938859-32938942)
chr1 (42-105)||(33669785-33669848)
chr1 (51-142)||(44112449-44112540)
chr1 (50-137)||(45350079-45350166)
chr1 (72-137)||(1689391-1689457)
chr1 (51-137)||(7203829-7203915)
chr1 (51-137)||(8464498-8464584)
chr1 (51-137)||(30439250-30439336)
chr1 (51-137)||(40610229-40610315)
chr1 (51-137)||(44641888-44641974)
chr1 (72-137)||(46281436-46281502)
chr1 (73-134)||(14247667-14247728)
chr1 (72-137)||(18610773-18610838)
chr1 (72-137)||(27352630-27352695)
chr1 (72-137)||(40605427-40605492)
chr1 (72-137)||(49621363-49621428)
chr1 (51-104)||(50797813-50797866)
chr1 (77-137)||(7371959-7372019)
chr1 (69-108)||(8846002-8846042)
chr1 (72-136)||(18959005-18959069)
chr1 (72-132)||(31834045-31834105)
chr1 (47-107)||(33660071-33660131)
chr1 (34-134)||(44161740-44161840)
chr1 (72-104)||(47398457-47398489)
chr1 (69-137)||(51193134-51193202)
chr1 (50-134)||(52369095-52369179)
[»] scaffold0018 (1 HSPs)
scaffold0018 (72-137)||(36002-36067)
[»] chr4 (54 HSPs)
chr4 (52-137)||(54165147-54165232)
chr4 (50-137)||(51224822-51224909)
chr4 (72-137)||(9472519-9472584)
chr4 (34-102)||(36123008-36123074)
chr4 (50-102)||(31048923-31048975)
chr4 (61-137)||(36444390-36444466)
chr4 (72-147)||(35332696-35332771)
chr4 (50-137)||(45779275-45779362)
chr4 (51-137)||(12074136-12074222)
chr4 (51-137)||(32901329-32901415)
chr4 (51-137)||(44165909-44165995)
chr4 (72-129)||(17805460-17805517)
chr4 (72-137)||(18880785-18880850)
chr4 (51-136)||(45548769-45548854)
chr4 (73-137)||(24209794-24209858)
chr4 (61-137)||(29384192-29384268)
chr4 (69-137)||(29513699-29513767)
chr4 (89-137)||(31833230-31833278)
chr4 (61-137)||(34116535-34116611)
chr4 (69-137)||(40721967-40722035)
chr4 (69-137)||(56025256-56025324)
chr4 (34-137)||(20056396-20056499)
chr4 (72-147)||(39449163-39449237)
chr4 (61-136)||(52224094-52224169)
chr4 (72-107)||(52911795-52911830)
chr4 (51-137)||(24772671-24772757)
chr4 (75-137)||(25139964-25140026)
chr4 (51-137)||(35017153-35017239)
chr4 (51-137)||(39010122-39010208)
chr4 (51-137)||(44170604-44170690)
chr4 (51-137)||(46794486-46794572)
chr4 (70-136)||(46844245-46844311)
chr4 (51-137)||(49194884-49194969)
chr4 (72-137)||(49584994-49585060)
chr4 (51-137)||(54251435-54251521)
chr4 (72-137)||(12241058-12241123)
chr4 (68-137)||(18568817-18568886)
chr4 (72-137)||(25523204-25523269)
chr4 (72-137)||(29694059-29694124)
chr4 (72-137)||(30866353-30866418)
chr4 (72-137)||(33820342-33820407)
chr4 (72-137)||(40755921-40755986)
chr4 (51-96)||(44368187-44368232)
chr4 (267-320)||(47376913-47376966)
chr4 (72-137)||(48722069-48722134)
chr4 (72-105)||(48743742-48743775)
chr4 (72-137)||(49768875-49768940)
chr4 (72-137)||(52891856-52891921)
chr4 (72-137)||(53357083-53357148)
chr4 (72-137)||(55960189-55960254)
chr4 (72-105)||(55996454-55996487)
chr4 (70-134)||(925066-925130)
chr4 (74-134)||(34114125-34114185)
chr4 (41-137)||(53662403-53662499)
[»] scaffold0172 (1 HSPs)
scaffold0172 (51-137)||(16975-17061)
[»] chr3 (32 HSPs)
chr3 (51-137)||(41877688-41877774)
chr3 (50-137)||(47849672-47849759)
chr3 (51-142)||(52727433-52727524)
chr3 (51-137)||(29705903-29705989)
chr3 (51-137)||(42424210-42424296)
chr3 (51-137)||(49196696-49196782)
chr3 (51-137)||(55344281-55344367)
chr3 (69-137)||(33256309-33256378)
chr3 (61-137)||(39604241-39604317)
chr3 (51-139)||(49130852-49130940)
chr3 (72-103)||(7668193-7668224)
chr3 (51-102)||(25142663-25142714)
chr3 (69-136)||(40419645-40419712)
chr3 (51-137)||(108431-108517)
chr3 (72-137)||(4494242-4494308)
chr3 (51-137)||(9582144-9582230)
chr3 (51-137)||(26279884-26279970)
chr3 (75-137)||(28300286-28300348)
chr3 (75-137)||(31176449-31176511)
chr3 (72-146)||(46473119-46473193)
chr3 (51-137)||(47056511-47056597)
chr3 (72-137)||(1295332-1295397)
chr3 (72-137)||(12094395-12094460)
chr3 (101-142)||(32580683-32580724)
chr3 (72-137)||(43409368-43409433)
chr3 (72-137)||(51032630-51032695)
chr3 (68-137)||(53932393-53932462)
chr3 (69-137)||(7949791-7949859)
chr3 (72-104)||(8627890-8627922)
chr3 (75-142)||(28920058-28920126)
chr3 (85-137)||(37134625-37134677)
chr3 (50-102)||(39540270-39540322)
[»] scaffold0001 (1 HSPs)
scaffold0001 (90-143)||(395855-395908)
[»] scaffold0154 (1 HSPs)
scaffold0154 (51-137)||(4315-4401)
[»] scaffold0014 (1 HSPs)
scaffold0014 (53-137)||(199266-199350)
[»] scaffold0522 (1 HSPs)
scaffold0522 (70-137)||(2508-2575)
[»] scaffold0160 (1 HSPs)
scaffold0160 (42-143)||(26415-26517)
[»] scaffold0002 (2 HSPs)
scaffold0002 (51-137)||(6427-6513)
scaffold0002 (72-137)||(440718-440783)
[»] scaffold0618 (1 HSPs)
scaffold0618 (72-137)||(8958-9023)
[»] scaffold0054 (1 HSPs)
scaffold0054 (51-104)||(31585-31638)
[»] scaffold0041 (1 HSPs)
scaffold0041 (61-134)||(34411-34484)
[»] scaffold0576 (1 HSPs)
scaffold0576 (69-137)||(9429-9497)
[»] scaffold0076 (1 HSPs)
scaffold0076 (34-101)||(11244-11309)
[»] scaffold0057 (1 HSPs)
scaffold0057 (61-105)||(38911-38955)
[»] scaffold0009 (1 HSPs)
scaffold0009 (61-137)||(190877-190953)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 2e-84; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 252 - 422
Target Start/End: Complemental strand, 4311190 - 4311020
Alignment:
Q  252 agttgattatgtgcattggatcaaatgaagaacacagtactatcatggactcttaacattagatattttcacactcttctcaatcctccatccccactct 351  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4311190 agttgattatgtgcattggatcaaatgaagaacacggtactatcatggactcttaacattagatattttcacactcttctcaatcctccatccccactct 4311091  T
Q  352 ccccaaccggaaactgttgatcaaaccaaccgtcccaaagcttccgacggaccttcgaagcatttccacca 422  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4311090 ccccaaccggaaactgctgatcaaaccaaccgtcccaaagcttccgacggacctccgaagcatttccacca 4311020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 26668582 - 26668496
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  || ||||||||||||||||||||||| |||||||||||| | |||||  | ||| ||||||||||||||    
T  26668582 aagagagaggataataacatgatgtgagtataagagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttctc 26668496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 24881739 - 24881794
Alignment:
Q  41 aaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgt 96  Q
    ||||| |||| |||||||||||||||  ||||||||| ||||||||||||||||||    
T  24881739 aaaaagaatatagagagatgataataacatcatgtgaatataagagagaaaattgt 24881794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 23633308 - 23633394
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||| ||||||||| |||||||||| ||||  |||| | || ||||||||||||||||||    
T  23633308 aagagagagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttataataaagtggttgtagaaatatcatttctc 23633394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 28647420 - 28647506
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||| ||||| ||||||||||||||||||||||| |  |||||||||  || ||||||||||||||    
T  28647420 aagagagagaataagaatataatgtaagtatgagagagaaaattgtcaaaaaattgtaataaaatagttatacaaatatcatttctc 28647506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 28965825 - 28965911
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||||| |||||||||||||| ||||||||| |||||||||| || |   ||||| || ||| ||||||||||||||    
T  28965825 aagagagaatataataatatcatgtgagtatgagagagaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 25924867 - 25924935
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| |||||||||| || | | ||||| || ||| ||||||||||||||    
T  25924867 atcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 25924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 27102175 - 27102115
Alignment:
Q  77 agtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||| |||||||||||||||||||   ||||| || ||| ||||||||||||||    
T  27102175 agtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 27143997 - 27143937
Alignment:
Q  77 agtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||| |||||||||||||||||||   ||||| || ||| ||||||||||||||    
T  27143997 agtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 32253856 - 32253780
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| |||||||||||| ||| |||||||||  ||| | || ||| ||||||||||||||    
T  32253856 ataagagtataatgtgagtatgagagagaaaattatcacaaaattatcaaaaagtggttgtacaaatatcatttctc 32253780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 19789061 - 19789152
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||||  |||| | ||| |||||||||| ||||||||| |||||||||| || |  |||||| || ||| |||||||||||||| ||||    
T  19789061 aagagagagaataagactataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcttaaa 19789152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 12044397 - 12044327
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    |||||||||| ||||||||| ||||| |||| || ||  |||||||| ||| |||||||||||||| ||||    
T  12044397 atgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcatttctcttaaa 12044327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 32457237 - 32457323
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| ||||||||||  ||||||||||||||||||| || ||  ||| | || ||| ||||||||||||||    
T  32457237 aagagagagaataagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 32457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 3821463 - 3821378
Alignment:
Q  52 agagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| ||||| | ||| |||| ||||| ||||||||| ||||||||||||| |  |||| | || ||| ||||||||||||||    
T  3821463 agagagaagataagaatataatgtaagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctc 3821378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 16743272 - 16743337
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| |||||||||   ||||| || ||| ||||||||||||||    
T  16743272 atgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 16743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 24126705 - 24126652
Alignment:
Q  267 ttggatcaaatgaagaacacagtactatcatggactcttaacattagatatttt 320  Q
    |||||| ||||||||||||  ||| ||| |||||||||||||| ||||||||||    
T  24126705 ttggattaaatgaagaacatggtattattatggactcttaacactagatatttt 24126652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 29383633 - 29383552
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    |||| ||||| |||||||||| ||||||||| |||||||||| || ||  ||| | || ||| |||||||||||||| ||||    
T  29383633 ataagagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctcttaaa 29383552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 237401 - 237469
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| |||||||||| | |||  || || || ||| ||||||||||||||    
T  237401 atcatgtgagtatgagagagaaagttgtcaaaaagtaatcacaagatggttgtacaaatatcatttctc 237469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 15364726 - 15364658
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||| ||| |||| |||||||| | | ||||| || ||| ||||||||||||||    
T  15364726 atcatgtgagtatgagagacaaagttgttaaaaaattgtagcaaaatggttgtacaaatatcatttctc 15364658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 17182163 - 17182099
Alignment:
Q  74 gtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||| |||||||||||||||| ||||||||||  |||||||| ||  ||||||||||||||    
T  17182163 gtgaatatgagagagaaaattgtcacaaaaattatcaaaaaatagttgttaaaatatcatttctc 17182099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 27612940 - 27612876
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||| ||| |||||||||||||||| ||||||||  ||||||| | ||  |||||||||||||    
T  27612940 atgtgaatatgagagagaaaattgtcataaaattattataaaataattgttcaaatatcatttct 27612876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 45372579 - 45372391
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  45372579 attggttaaaaacaatgaagagagatgataataacatcatgtgagtataagagagaaaattgttaaaaagttattgtaaaatagtcgtagaaatatcatt 45372480  T
Q  134 tctcgtaaattaatcgtggaggtacaactttctactttttcgtatcgaataggtaaagaaagcaacaaattaaagattacaagttacat 222  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45372479 tcttgtaaattaatcgtggaggtacaactttctactttttcgtatggaataggtaaagaaagcaacaaattaaagattacaagttacat 45372391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 246 - 422
Target Start/End: Complemental strand, 30486949 - 30486773
Alignment:
Q  246 tgggtaagttgattatgtgcattggatcaaatgaagaacacagtactatcatggactcttaacattagatattttcacactcttctcaatcctccatccc 345  Q
    |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30486949 tgggaaagttgattatgtgcattggatcaaatgaagaatacggtactatcatggactcttaacattagatattttcacactcttctcaatcctccatccc 30486850  T
Q  346 cactctccccaaccggaaactgttgatcaaaccaaccgtcccaaagcttccgacggaccttcgaagcatttccacca 422  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  30486849 cactctccccaaccggaaactgctgatcaaaccaaccgtcccaaaccttccgacggacctctgaagcatttccacca 30486773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 3091827 - 3091740
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcg 138  Q
    ||||||||| |||| || || |||||||||| |||||||||||||||||||| |||||  |||||||| ||| |||||||||||||||    
T  3091827 aagagagataataaaagaataatgtgagtatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcatttctcg 3091740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 41353481 - 41353568
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| ||||||| ||||| |||||||||| ||||||||| |||| ||||||||||| |||| |  | ||| ||||||||||||||    
T  41353481 aaagagaaatgataagagtataatgtgagtatgagagagaaagttgttaaaaaattatcataaattgattgtacaaatatcatttctc 41353568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 12600134 - 12600048
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||||||||| |||||||||| ||||||||| |||||| |||||||||  ||| | || ||| ||||||||||||||    
T  12600134 aagagagagaataatagtataatgtgagtatgagagagaaagttgtcacaaaattatcacaaagtggttgtacaaatatcatttctc 12600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 38021442 - 38021356
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  ||||||  ||||||| ||||| ||| ||||| |||||||||||||||  ||||||||| ||| ||||||||||||||    
T  38021442 aagagagagaataataacatcatgtaagtatgagaaagaaagttgtcaaaaaattatactaaaatagttgtacaaatatcatttctc 38021356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 34372912 - 34372847
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||||||||||||||||| |   |||||| | ||||||||||||||||||    
T  34372912 atgtgagtatgagagagaaaattgtcaaaaaattgttagaaaataattgtagaaatatcatttctc 34372847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 29893696 - 29893609
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcg 138  Q
    |||||||| ||||| |  ||||||||||||||||||||||| ||||  |||| |||||  ||| |||| ||| |||||||||||||||    
T  29893696 aagagagaggataagaccatcatgtgagtataagagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttctcg 29893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 1298280 - 1298194
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||  |||||||  ||||| | ||||| ||||||||||||||||||||||||| | ||||| ||  || ||||||||||||||    
T  1298280 aagagaggggataataacatcatataagtatgagagagaaaattgtcaaaaaattatagcaaaatggttctacaaatatcatttctc 1298194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 1889233 - 1889147
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||||||| ||||||||||||| ||  ||| | || ||| ||||||||||||||    
T  1889233 aagagagagaataagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctc 1889147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 32688529 - 32688615
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||| || |||| ||||| |||||||||| ||||||||| ||||||||||||| ||  ||| | || ||| ||||||||||||||    
T  32688529 aagagacataataagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctc 32688615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 33030087 - 33030173
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaat-agtcgtagaaatatcatttct 136  Q
    |||||| | |||||||||||||| ||||||  ||||||||| ||||||||||||||||  |||||  || ||| |||||||||||||    
T  33030087 aagagaaaggataatagtatcatatgagtacgagagagaaagttgtcaaaaaattatcacaaaatgggttgtacaaatatcatttct 33030173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 35171207 - 35171297
Alignment:
Q  47 aataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||| |  ||||||||||||| ||||||||| ||||   |||||| ||  ||||| || ||| ||||||||||||||    
T  35171207 aataaagagagatgataagaccatcatgtgagtatgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttctc 35171297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 8352900 - 8352835
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||||||||| |||| ||||   |||||||| ||| ||||||||||||||    
T  8352900 atgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctc 8352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 34139044 - 34139109
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||| ||||||||||||||||||||  ||| |||  ||| ||||||||||||||    
T  34139044 atgtgagtatgagagataaaattgtcaaaaaattatcacaaagtagatgtacaaatatcatttctc 34139109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 36816422 - 36816487
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||| ||| | ||||| | |||||||||||||||| ||||||||| ||| ||||||||||||||    
T  36816422 atgtgaatatgaaagagagagttgtcaaaaaattatcataaaatagttgtataaatatcatttctc 36816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 45376733 - 45376648
Alignment:
Q  138 gtaaattaatcgtggaggtacaactttctactttttcgtatcgaataggtaaagaaagcaacaaattaaagattacaagttacatc 223  Q
    |||||| |||||||||||  ||| | |||||||||| |||| |||||||| || ||| ||||||||||||||| ||| || |||||    
T  45376733 gtaaatgaatcgtggaggctcaaatctctacttttttgtattgaataggtgaaaaaatcaacaaattaaagatcacatgtgacatc 45376648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 6851662 - 6851730
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| |||||||||| || | | |||||||  ||| ||||||||||||||    
T  6851662 atcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatagatgtacaaatatcatttctc 6851730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 9202522 - 9202586
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||| ||| | ||||||| ||||||||||||| || |||||| || |||||||||||||||||    
T  9202522 atgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatggttgtagaaatatcatttct 9202586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 9695065 - 9695132
Alignment:
Q  70 tcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||| ||||||||| ||||| ||||||||||  | ||| || ||| ||||||||||||||    
T  9695065 tcatgtgagtatgagagagaaagttgtccaaaaattatctcataatggttgtacaaatatcatttctc 9695132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 6365272 - 6365186
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||| |||  |||||||||||||||||||||| ||  ||| | || ||| ||||||||||||||    
T  6365272 aagagagaaaataagagtataatgtgaatatgtgagagaaaattgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctc 6365186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 6884996 - 6884910
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||| |  ||||||||||||| ||||||||| ||||  |||| |||||  ||| |||| ||| ||||||||||||||    
T  6884996 aagagagaggataagaccatcatgtgagtatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttctc 6884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 10288212 - 10288150
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| ||||| ||| ||||| ||||||||||  |||||||| ||| ||||||||||||||    
T  10288212 tgagtatgagagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctc 10288150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 13553209 - 13553147
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| ||||||||||||||| ||||||||||  ||| | || ||| ||||||||||||||    
T  13553209 tgagtatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 13553147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 17917454 - 17917388
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcg 138  Q
    |||||||||| |||||||||||| |||||||||| |   |||||| | ||| |||||||||||||||    
T  17917454 atgtgagtatgagagagaaaattatcaaaaaattgttaaaaaataattgtacaaatatcatttctcg 17917388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 23045166 - 23045093
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| ||||||||| |||||||||| |||    |||||||| ||| ||||||||||||||    
T  23045166 ataagagtataatgtgagtatgagagagaaagttgtcaaaaagttag---aaaatagttgtacaaatatcatttctc 23045093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 27540101 - 27540015
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||||||||||| ||||| ||| |||||||||| || | | ||||| || ||| |||||| |||||||    
T  27540101 aagagagaggataataacatcatgtgagtatgagagaaaaagttgtcaaaaagttgtagcaaaattgttgtacaaatatgatttctc 27540015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 33857303 - 33857249
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    ||||||||  |||| | |||||||||||||| ||||||||| |||||||||||||    
T  33857303 aagagagagaataagaatatcatgtgagtatgagagagaaagttgtcaaaaaatt 33857249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 36587474 - 36587540
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcg 138  Q
    |||||||||| ||||||||| ||||||||||||| ||  ||||| || ||  |||||||||||||||    
T  36587474 atgtgagtatgagagagaaagttgtcaaaaaattgtcaaaaaatggttgttcaaatatcatttctcg 36587540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 44484641 - 44484727
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||| |  ||||||||||||| ||||||||| ||||  ||||||| |   ||||| || ||| ||||||||||||||    
T  44484641 aagagagatgataagaacatcatgtgagtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctc 44484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 7497997 - 7498062
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||||||| || |  |||||| || ||| ||||||||||||||    
T  7497997 atgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 10749685 - 10749750
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| | ||||| ||||||||||| ||| || |||||| || ||| ||||||||||||||    
T  10749685 atgtgagtatgaaagagagaattgtcaaaagattgtcataaaatggttgtacaaatatcatttctc 10749750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 26321870 - 26321935
Alignment:
Q  71 catgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    ||||||||||| | |||| ||||||||||||| |||||  ||||| || ||| |||||||||||||    
T  26321870 catgtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 29192662 - 29192719
Alignment:
Q  77 agtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||||||||||||||||| ||||||||||||   ||||| || ||| |||||||||||    
T  29192662 agtataagagagaaaattatcaaaaaattattaaaaaatggttgtacaaatatcattt 29192719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 36180568 - 36180503
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||| ||| | ||||| |||||||||||||||||| ||||||| | ||| |||||| |||||||    
T  36180568 atgtgaatatgaaagagataattgtcaaaaaattatcataaaataattgtaaaaatattatttctc 36180503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 40326192 - 40326159
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    ||||||| ||||||||||||||||||||||||||    
T  40326192 atgtgagcataagagagaaaattgtcaaaaaatt 40326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 40358122 - 40358183
Alignment:
Q  77 agtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||| ||||| |||||||||| |||||||||   |||||||| ||||||||||||||||||    
T  40358122 agtatgagagaaaaaattgtcacaaaaattattaaaaaatagttgtagaaatatcatttctc 40358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 3299108 - 3299176
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||||||| ||||| ||||  |||| || || |||||| || ||| ||||||||||||||    
T  3299108 atcatgtgagtataagaaagaaagttgtttaaaagttgtcataaaatggttgtacaaatatcatttctc 3299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 12784406 - 12784470
Alignment:
Q  74 gtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||||||| |||||| |||||||||  |||||| || ||| ||||||||||||||    
T  12784406 gtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 13711137 - 13711061
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| ||||||||| |||||| ||| |||||  ||| | || ||| ||||||||||||||    
T  13711137 ataagagtataatgtgagtatgagagagaaagttgtcacaaagttatcaaaaagtggttgtacaaatatcatttctc 13711061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 26321703 - 26321767
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||||| | |||| ||||||||||||| |||||  ||||| || ||| |||||||||||||    
T  26321703 atgtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 34442189 - 34442113
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| || |||||||  |||||||  |||||||||||||||| |||| | || ||| ||||||||||||||    
T  34442189 ataagagtataatatgagtatgtgagagaatgttgtcaaaaaattatcataaagtggttgtacaaatatcatttctc 34442113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 33685790 - 33685892
Alignment:
Q  251 aagttgattatgtgcattggatcaaatgaagaacacagtactatcatggactcttaacattagatattttcacactcttctcaatcctccatccccactc 350  Q
    ||||||||||||| |||| ||| |||||||||| | |||| ||||||||||||||||||  |||||||||||||||||||||  | ||| ||||||||||    
T  33685790 aagttgattatgtccattagattaaatgaagaatatagtattatcatggactcttaacacaagatattttcacactcttctctcttctctatccccactc 33685889  T
Q  351 tcc 353  Q
    |||    
T  33685890 tcc 33685892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 31006145 - 31006059
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||||| ||||| ||||||||| |||||||||| || | | |||||||||||| ||||||||||||||    
T  31006145 aagagagaggataataacatcatgtaagtatgagagagaaagttgtcaaaaagttttagcaaaatagtcgtacaaatatcatttctc 31006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 41192655 - 41192587
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| ||||||||||||| | | |||||||| ||| ||||||||||||||    
T  41192655 atcatgtgagtatgagagagaaagttgtcaaaaaattgtagcaaaatagttgtacaaatatcatttctc 41192587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 17489434 - 17489351
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    ||||||||| |||| | | |||||||||||| ||||||||||||||  ||||||||||  |||||||| ||| |||||||||||    
T  17489434 aagagagataataagaatgtcatgtgagtatgagagagaaaattgtgtaaaaattatcaaaaaatagttgtacaaatatcattt 17489351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 35464590 - 35464654
Alignment:
Q  73 tgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||| ||||||||||||  ||||||||||  |||||| ||||| ||||||||||||||    
T  35464590 tgtgagtataaaagagaaaattgttcaaaaattatcaaaaaataatcgtacaaatatcatttctc 35464654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 3154628 - 3154710
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||||||||||| | | |||||||| ||| ||||||||| ||||  |||| ||||| ||||||||| ||| ||||||||||    
T  3154628 aagagagatgataaaaatgtcatgtgattatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 27340955 - 27340869
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||| |||||||||||||||||||||||||  |||| |  | ||| ||||||||||||||    
T  27340955 aagagagagaataagaatataatgtgagtatgagagagaaaattgtcaaaaaattataataaagtgattgtacaaatatcatttctc 27340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 35972642 - 35972608
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaa 103  Q
    |||||||||||||||||||||||||||||||||||    
T  35972642 atcatgtgagtataagagagaaaattgtcaaaaaa 35972608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 36548365 - 36548451
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||| ||||||||||||| ||||||||| |||||| ||| || ||  ||||| ||  || ||||||||||||||    
T  36548365 aagagagaggataatagcatcatgtgagtatgagagagaaagttgtcagaaagttgtcacaaaatggttatacaaatatcatttctc 36548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 19827369 - 19827413
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||    
T  19827369 ataagagtatcatgtgagtatgagagataaaattgtcaaaaaatt 19827413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 36786242 - 36786325
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    ||||||||| ||||| | | |||||||||||| ||||||||| ||||| ||||||||| | ||||| || | | ||||||||||    
T  36786242 aaagagagaggataaaaatgtcatgtgagtatgagagagaaagttgtccaaaaattattgcaaaatggttggacaaatatcatt 36786325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 582876 - 582938
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| ||||||||||||||  |||| |||||  |||||||| ||| ||||||||||||||    
T  582876 tgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcatttctc 582938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 6940155 - 6940221
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||| |||||||||  |||||| || ||| ||||||||||||||    
T  6940155 atgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 6940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 9714121 - 9714207
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||| ||||| ||| |||||| |||||||||||||| ||||| || || |||| | || ||| | ||||||||||||    
T  9714121 aagagagataataaaagtataatgcgagtatgagagagaaaattgttaaaaagttgtcataaagtggttgtacatatatcatttctc 9714207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 12349867 - 12349781
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||||||| ||||| |||||| ||| || ||  ||||| |||||| || |||||||||||    
T  12349867 aagagagagaataagagtataatgtgagtataagatagaaagttgtcacaaagttgtcaaaaaatggtcgtacaagtatcatttctc 12349781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 26685777 - 26685691
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||||||||||| ||||||||| || | ||||| || | || |||| || ||| ||||||||||||||    
T  26685777 aagagagaagataataacatcatgtgagtatgagagagaaagttataaaaaagttgtagtcaaatggttgtacaaatatcatttctc 26685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 26955508 - 26955422
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||||||||||| ||||||||| || | ||||| || | || |||| || ||| ||||||||||||||    
T  26955508 aagagagaagataataacatcatgtgagtatgagagagaaagttataaaaaagttgtagtcaaatggttgtacaaatatcatttctc 26955422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 31708456 - 31708370
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||| | | | || ||||||| ||||||||| |||||||||| || |  |||||| || ||| ||||||||||||||    
T  31708456 aagagagatgataagaatttaatatgagtatgagagagaaagttgtcaaaaagttgttataaaatggttgtacaaatatcatttctc 31708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 36581474 - 36581536
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||||||| ||||| ||||||||||  ||| | || ||| ||||||||||||||    
T  36581474 tgagtataagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctc 36581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 2456091 - 2456026
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||| ||||| ||||||||||||| |  ||||||||| ||| | ||||||||||||    
T  2456091 atgtgagtatgagatagaaagttgtcaaaaaattgttataaaatagttgtatagatatcatttctc 2456026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 5996732 - 5996667
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||| ||| ||||||||||||||| ||||||| |   |||||||| ||| ||||||||||||||    
T  5996732 atgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcatttctc 5996667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 6538935 - 6538870
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||| ||| | ||||||| ||||||||||||||||  |||||| | ||| ||||||||||||||    
T  6538935 atgtgaatatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcatttctc 6538870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 14206475 - 14206422
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaat 104  Q
    ||||||||| |||| || || |||||||||| ||||||||| ||||||||||||    
T  14206475 aagagagataataagaggataatgtgagtatgagagagaaagttgtcaaaaaat 14206422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 39191840 - 39191873
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||||||||||||||| |||||||||||||    
T  39191840 atgtgagtataagagagaaagttgtcaaaaaatt 39191873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 22920477 - 22920569
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaat 143  Q
    |||||||||||||| |  ||||||||||||| ||||||||| ||||| |||| || |   ||||| || ||| |||||| ||||||| |||||    
T  22920477 aagagagatgataagaacatcatgtgagtatgagagagaaagttgtccaaaatttgttacaaaatggttgtacaaatattatttctcataaat 22920569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 24431627 - 24431687
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttc 135  Q
    ||||||| |||||||||||||||||||| || || |||| | || ||| ||||||||||||    
T  24431627 tgagtatgagagagaaaattgtcaaaaagttgtcttaaagtggttgtacaaatatcatttc 24431687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 32912104 - 32912060
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaat 115  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||    
T  32912104 atgtgagtatgagagagaaaattgtcacaaaaattatcataaaat 32912060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 38010958 - 38010870
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgt 139  Q
    |||||||| ||||| |  ||||||||||||| ||||||||||||||  |||| |||||  ||| |  | ||| ||||||||||||||||    
T  38010958 aagagagaggataagaccatcatgtgagtatgagagagaaaattgtacaaaagttatcacaaattgattgtacaaatatcatttctcgt 38010870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 38501019 - 38500943
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| || ||||||| | ||||||| ||||||||||||| ||  ||||| || ||| ||||||||||||||    
T  38501019 ataagagtataatatgagtatgaaagagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 38500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 7990155 - 7990074
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||  ||| |||||||||||||| ||||    
T  7990155 ataagagtataatgtgagtataagagagaaaattatcaaaaaattatcataaaatagatgtacaaatatcatttctcttaaa 7990074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 42060752 - 42060656
Alignment:
Q  41 aaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||| ||||||||| || ||||| |  ||||||||||||| ||||||||| |||||||||| |||| | ||||| || ||| ||||||||||||||    
T  42060752 aaaaaaaataaagagggaggataacaacatcatgtgagtatgagagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctc 42060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 1790059 - 1789994
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    ||||||||||||| ||||||||| |||||||||| || ||| |||||||| ||| |||||||||||    
T  1790059 atcatgtgagtatgagagagaaagttgtcaaaaagttgtcgcaaaatagttgtacaaatatcattt 1789994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 16567409 - 16567316
Alignment:
Q  42 aaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||||||  |||| | ||| |||||||||| | |||||||||||||||||| ||||  |||||| || ||| ||||||||||||||    
T  16567409 aaaacaatagagagaga--ataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 16598253 - 16598346
Alignment:
Q  42 aaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||||||  |||| | ||| |||||||||| | |||||||||||||||||| ||||  |||||| || ||| ||||||||||||||    
T  16598253 aaaacaatagagagaga--ataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 30862722 - 30862641
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    ||||||||  |||| ||||| ||||||||||  ||||||||||||||||||||||||| |||| | || ||| |||||||||||    
T  30862722 aagagagagaataagagtataatgtgagtat--gagagaaaattgtcaaaaaattatcataaagtggtagtacaaatatcattt 30862641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 10014959 - 10015025
Alignment:
Q  70 tcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||||||| ||||| ||| ||||| ||| |||||| ||||||||| ||| |||||||||||||    
T  10014959 tcatgtgagtatgagagaaaaagttgtccaaatattatcataaaatagttgtacaaatatcatttct 10015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 18111617 - 18111683
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| |||||||||||||||| |||||||||  |||||| || |||||| |||||||||||    
T  18111617 atgtgagtatgagagagaaaattgtcacaaaaattattataaaatggttgtagaagtatcatttctc 18111683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 33881690 - 33881776
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||||||||||| ||||||||| || ||||||| ||||   ||||| || ||| ||||||||||||||    
T  33881690 aagagagaggataataacatcatgtgagtatgagagagaaagttatcaaaaagttataccaaaatggttgtataaatatcatttctc 33881776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 34304684 - 34304746
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||||||||| ||||||||||||||| ||||||| ||  |||||||| ||| |||||||||||    
T  34304684 atgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcattt 34304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 26153710 - 26153646
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||||||||| |||| || || ||||||||| ||| ||||||||||||||    
T  26153710 atgtgagtatgagagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcatttctc 26153646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 31364890 - 31364955
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| | ||||||||||||||||||||| |  |||| | |||||| ||||||||||||||    
T  31364890 atgtgagtatgaaagagaaaattgtcaaaaaattgtaataaagtggtcgtacaaatatcatttctc 31364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 47424970 - 47425027
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatc 108  Q
    ||||||||| |||| || || |||||||||| ||||||||||||||||||| ||||||    
T  47424970 aagagagataataagaggataatgtgagtatgagagagaaaattgtcaaaagattatc 47425027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 35590749 - 35590818
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    ||||||||||||||||| |||||||  ||||||  || |||||||||| |||||||||||| || |||||||    
T  35590749 attggttaaaaacaatagagagaga--ataataacataatgtgagtatgagagagaaaattatctaaaaatt 35590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 46651748 - 46651672
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| ||||||||| |||| |||||||| || |||| |||| ||| | ||||||||||||    
T  46651748 ataaaagtataatgtgagtatgagagagaaagttgttaaaaaattgtcataaagtagttgtacatatatcatttctc 46651672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 2414180 - 2414077
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    ||||||||||||||||  |||||||  |||| || || |||||||||| ||| | ||| ||||||||||||| ||   || |||| ||| ||||||||||    
T  2414180 attggttaaaaacaatggagagagaaaataaaagaataatgtgagtatgagatataaagttgtcaaaaaattgtcacgaagtagttgtataaatatcatt 2414081  T
Q  134 tctc 137  Q
    ||||    
T  2414080 tctc 2414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 31487249 - 31487190
Alignment:
Q  79 tataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||| ||| |||||||||| ||||||| | || |||||||||||||||    
T  31487249 tataagagagaaaattatcataaaaattatcataaaataattgttgaaatatcatttctc 31487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 42276153 - 42276086
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||||||||||||| || |||||||||| |   |||||||| ||| |||||||||||||| ||||    
T  42276153 tgagtataagagagaaagttatcaaaaaattgttagaaaatagttgtacaaatatcatttctcttaaa 42276086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 47644791 - 47644708
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    ||||||||  |||| | ||| |||||||||| ||||||||| |||||||||||||||  |||| | || ||| |||||||||||    
T  47644791 aagagagagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattataataaagtggttgtacaaatatcattt 47644708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 2790263 - 2790209
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    ||||||||  |||| ||||| |||||||||| ||||||||| |||||||||||||    
T  2790263 aagagagagaataagagtataatgtgagtatgagagagaaagttgtcaaaaaatt 2790209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 16645664 - 16645718
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||| |||||||  ||||||||| ||| ||||||||| |||||||||||||    
T  16645664 aagagagaggataataacatcatgtgactatgagagagaaagttgtcaaaaaatt 16645718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 17620025 - 17620079
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||| |||||||  ||||||||| ||| ||||||||| |||||||||||||    
T  17620025 aagagagaggataataacatcatgtgactatgagagagaaagttgtcaaaaaatt 17620079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 19426666 - 19426580
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| || || |||||||||| ||||||||| |||||||||| || ||  ||||| || ||| ||||||||||||||    
T  19426666 aagagagagaataagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 23329964 - 23329902
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| | |||||||||||||||||||||||  |||||| || ||| |||| |||||||||    
T  23329964 tgagtatgaaagagaaaattgtcaaaaaattataataaaatggttgtacaaatgtcatttctc 23329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 27688937 - 27689023
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    ||||| ||||||||| |  ||||||||||||||||||| ||||||||  | || || ||| |||||| | ||| |||||||||||||    
T  27688937 aaagatagatgataaaaacatcatgtgagtataagagataaaattgtttacaagttgtcgcaaaataattgtataaatatcatttct 27689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 28081788 - 28081854
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcg 138  Q
    |||||||||| ||||||||| |||| ||||||||||   ||||| || ||| |||||||||||||||    
T  28081788 atgtgagtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttctcg 28081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 40507191 - 40507161
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||||||||||||||||||||||||||    
T  40507191 tgagtataagagagaaaattgtcaaaaaatt 40507161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 43255552 - 43255634
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||||||||||| | | |||||||||||| ||| ||||||||||  ||||||| ||  |||||| | ||| ||||||||||    
T  43255552 aagagagatgataagaatgtcatgtgagtatgagaaagaaaattgtacaaaaattgtcacaaaataattgtacaaatatcatt 43255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 18157191 - 18157256
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||||||||| ||||||||||  ||| | || ||| ||||||||| ||||    
T  18157191 atgtgagtatgagagagaaaattgtctaaaaattatcacaaagtggttgtacaaatatcatgtctc 18157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 30447446 - 30447381
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaata 116  Q
    ||||||||  |||| ||||| |||||||||| |||||||| ||||||||||| || || |||||||    
T  30447446 aagagagagaataagagtataatgtgagtatgagagagaagattgtcaaaaagttgtcataaaata 30447381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 38023430 - 38023495
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| ||||||||||  ||| | || ||| ||||||||||||||    
T  38023430 atgtgagtatgagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctc 38023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 43079638 - 43079703
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| ||||||||||  ||| | || ||| ||||||||||||||    
T  43079638 atgtgagtatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 43079703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 17039222 - 17039158
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||||| ||||||||| ||||  |||||||||   |||||||| ||| |||||||||||||    
T  17039222 atgtgagtatgagagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 29034202 - 29034133
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||| ||||||||| |||||||  | ||| | ||| |||||||||| |||||||||||| ||||||||||    
T  29034202 attggtcaaaaacaatgaagagag--ggtaagaatataatgtgagtatgagagagaaaattatcaaaaaatt 29034133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 34349033 - 34349097
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||||| |||||||||||||||||||| || |   ||||| || ||| |||||||||||||    
T  34349033 atgtgagtatgagagagaaaattgtcaaaaagttgtacaaaaatggttgtacaaatatcatttct 34349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 29509352 - 29509256
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaat 147  Q
    |||||||| ||||||| |||||||||||||| ||||||||| |||||||||| || | | ||||| || ||| |||||||||||||| |||||||||    
T  29509352 aagagagaggataataatatcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcataaattaat 29509256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 10344410 - 10344324
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| || || || ||||||||||||| ||||||||| ||||| |||||||||  ||||||||  ||| ||||||||||||||    
T  10344410 aagagagaggaaaagagcatcatgtgagtatgagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctc 10344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 42047421 - 42047335
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||||||||||||||||| ||| ||  ||| |||| ||| ||||||||||||||    
T  42047421 aagagagaaaataagagtataatgtgagtatgagagagaaaattgtcaaaagattgtcccaaagtagttgtacaaatatcatttctc 42047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 14029228 - 14029285
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatc 108  Q
    ||||||||| |||| || || ||||||||| |||||||||||||||||||||||||||    
T  14029228 aagagagataataagaggataatgtgagtaaaagagagaaaattgtcaaaaaattatc 14029285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 14228810 - 14228710
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||| ||||||||| ||||||||  |||| |  ||||||||||||| ||||||||| ||||  |||| |||||  |||||||| ||| ||||||||||    
T  14228810 attggtcaaaaacaatgaagagagagaataagaacatcatgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatt 14228711  T
Q  134 t 134  Q
    |    
T  14228710 t 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 26294290 - 26294189
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||| ||||||||| ||||||||  |||| ||||| ||||||||||  ||||||||||||||||||| || ||  ||||| || |||  |||||||||    
T  26294290 attggtcaaaaacaatgaagagaga--ataagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaaatggttgtaccaatatcatt 26294193  T
Q  134 tctc 137  Q
    ||||    
T  26294192 tctc 26294189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 26307547 - 26307446
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||| ||||||||| ||||||||  |||| ||||| ||||||||||  ||||||||||||||||||| || ||  ||||| || |||  |||||||||    
T  26307547 attggtcaaaaacaatgaagagaga--ataagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaaatggttgtaccaatatcatt 26307450  T
Q  134 tctc 137  Q
    ||||    
T  26307449 tctc 26307446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 29913647 - 29913563
Alignment:
Q  54 agagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcg 138  Q
    ||||||||||| |  ||||| | | ||||||||| ||||||||  |||||||||| ||||||||| ||| |||||||||||||||    
T  29913647 agagatgataacaacatcatataaatataagagaaaaaattgtttaaaaattatcataaaatagttgtacaaatatcatttctcg 29913563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 42012598 - 42012661
Alignment:
Q  74 gtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||||||| |||||||||| ||||| |||| |||| ||| ||||||||||||||    
T  42012598 gtgagtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttctc 42012661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 27630983 - 27630897
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||| ||||||||| ||||||||||||| || |||||| |  ||| ||||||||||||||    
T  27630983 aagagagagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcatttctc 27630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 36064116 - 36064030
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||| | | |||||||||||| ||||||||||||||| |||| || ||  |||||  | ||| ||||||||||||||    
T  36064116 aagagagatgataagaatgtcatgtgagtatgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcatttctc 36064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 10184132 - 10184197
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| |||||||||||| |||||||||||| | |||||||   || ||||||||||||||    
T  10184132 atgtgagtatgagagagaaaattatcaaaaaattattgcaaaatagatatacaaatatcatttctc 10184197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 44672187 - 44672260
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattat 107  Q
    ||||||||||||||||  |||||||  |||| ||||| |||||||||| |||||||||||| ||| ||| ||||    
T  44672187 attggttaaaaacaatggagagagaaaataagagtataatgtgagtatgagagagaaaattatcacaaagttat 44672260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 20852982 - 20852914
Alignment:
Q  74 gtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    |||||||| ||| ||||| ||||| |||||||||| |||||| || ||| |||||||||||||| ||||    
T  20852982 gtgagtatgagaaagaaagttgtctaaaaattatcataaaatggttgtacaaatatcatttctcctaaa 20852914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 38504238 - 38504170
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||| ||||||| ||||||||| ||||||||||||| | | ||||| || ||| ||||||||||||||    
T  38504238 atcatatgagtattagagagaaagttgtcaaaaaattgtagcaaaatggttgtacaaatatcatttctc 38504170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 43587709 - 43587641
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| |||||||||||||||||||| || | | ||||| ||  || ||||||||||||||    
T  43587709 atcatgtgagtatgagagagaaaattgtcaaaaagttgtagcaaaatggttatacaaatatcatttctc 43587641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 11089642 - 11089579
Alignment:
Q  71 catgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    ||||||||| | ||||| ||| ||||||||||||||| ||||||| || ||| |||||||||||    
T  11089642 catgtgagtgtgagagaaaaagttgtcaaaaaattatagtaaaatggttgtacaaatatcattt 11089579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 12697698 - 12697781
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||||||||| ||| |  || |||||||| | ||||||||| ||||  |||||||||| ||||||||| ||| |||||||||||    
T  12697698 aagagagatggtaagaacataatgtgagtgtgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcattt 12697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 20683607 - 20683552
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatta 106  Q
    ||||||||  |||| | ||| |||||||||||||||||||| ||||||||||||||    
T  20683607 aagagagagaataaaaatataatgtgagtataagagagaaagttgtcaaaaaatta 20683552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 22960421 - 22960488
Alignment:
Q  71 catgtgagtataagagagaaaattgtcaaa-aaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||| ||||| |||||||||| | |||||||| |||||| || ||| ||||||||||||||    
T  22960421 catgtgagtatgagagataaaattgtcacagaaattatcctaaaatggttgtacaaatatcatttctc 22960488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 40997742 - 40997687
Alignment:
Q  52 agagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattat 107  Q
    |||||||| |||| | ||| |||||||||| ||||| |||||||||||||||||||    
T  40997742 agagagataataagaatataatgtgagtatgagagaaaaaattgtcaaaaaattat 40997687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 34494646 - 34494708
Alignment:
Q  74 gtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||| |||||||||||| |||||||||| |   |||||||| ||| |||||||||||||    
T  34494646 gtgagtatgagagagaaaattttcaaaaaattgttagaaaatagttgtacaaatatcatttct 34494708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 41304967 - 41305053
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||||||||||||| |||||| |||||| |  |||| | || ||| ||||||||||||||    
T  41304967 aagagagagaataaaaatataatgtgagtataagagagaaagttgtcataaaattgtaataaagtggttgtacaaatatcatttctc 41305053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 42716385 - 42716311
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaa 146  Q
    |||||||||| ||||||||| |||||||||||||||   ||| | || ||| |||||||||||||| || |||||    
T  42716385 atgtgagtatgagagagaaagttgtcaaaaaattatgaaaaagtggttgtacaaatatcatttctcttatattaa 42716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 43186364 - 43186298
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttc 135  Q
    ||||||||||||| ||||||||| ||||  ||||||||||  |||||| | ||| ||||||||||||    
T  43186364 atcatgtgagtatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 6005009 - 6004944
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| ||||||| ||  ||| |||| ||| ||||||||||||||    
T  6005009 atgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcatttctc 6004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 7010740 - 7010707
Alignment:
Q  71 catgtgagtataagagagaaaattgtcaaaaaat 104  Q
    ||||||||||| ||||||||||||||||||||||    
T  7010740 catgtgagtatgagagagaaaattgtcaaaaaat 7010707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 9738699 - 9738732
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||||| |||||||||||||||||||||||    
T  9738699 atgtgagtatgagagagaaaattgtcaaaaaatt 9738732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 14548829 - 14548894
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| |||||||||   ||||| || ||| ||||||||||||||    
T  14548829 atgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 14548894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 20473844 - 20473779
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| | ||||||| ||||||||||||| |  |||||| || ||| ||||||||||||||    
T  20473844 atgtgagtatgatagagaaagttgtcaaaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 22767197 - 22767132
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| |||||||||||||||||||| || |   ||||| || ||| ||||||||||||||    
T  22767197 atgtgagtatgagagagaaaattgtcaaaaagttgtgagaaaatggttgtacaaatatcatttctc 22767132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 32725786 - 32725851
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||| ||||||||| ||||||||||  ||| | || ||| ||||||||||||||    
T  32725786 atgtgagtatgagagaaaaaattgtctaaaaattatcacaaagtggttgtacaaatatcatttctc 32725851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 33863254 - 33863319
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||| ||||||||| ||||||||||  ||||| || ||| | ||||||||||||    
T  33863254 atgtgagtatgagagataaaattgtctaaaaattatcagaaaatggttgtacatatatcatttctc 33863319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 35595278 - 35595229
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagt 118  Q
    ||||||||||||| ||||||||| |||||||||||| |||  ||||||||    
T  35595278 atcatgtgagtatgagagagaaagttgtcaaaaaatcatcacaaaatagt 35595229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 36497747 - 36497650
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaatc 148  Q
    |||||||| ||||| | | |||| ||| ||| ||||||||| ||||| |||| || ||  |||||||| ||| |||||||||||||| |||| |||||    
T  36497747 aagagagaagataagaatgtcatctgaatatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcatttctcttaaaataatc 36497650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 40608598 - 40608545
Alignment:
Q  52 agagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||| |||||| |||  ||||||||| ||||| |||||||||||||||||    
T  40608598 agagagataataataatatattgtgagtatgagagaaaaaattgtcaaaaaatt 40608545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 42786665 - 42786738
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaatt 144  Q
    |||||||||||||||||||| |||||| ||||||| |   ||||| || ||| |||||||||||||| ||||||    
T  42786665 atgtgagtataagagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaatatcatttctcataaatt 42786738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 44090952 - 44090887
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||| |||| |||||||||||||||| ||| |||||| ||| |||| ||  ||||||||||||||    
T  44090952 atgtgtgtatgagagagaaaattgtcacaaagttatcgaaaagtagttgttcaaatatcatttctc 44090887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 44712043 - 44711978
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||||||||||||||||||   ||| || | ||| ||||||||||||||    
T  44712043 atgtaagtatgagagagaaaattgtcaaaaaattattacaaattaattgtataaatatcatttctc 44711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 2768228 - 2768147
Alignment:
Q  54 agagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||| |  || |||||||||| ||||||||  |||||||||| ||||| |||||  || ||| ||||||||||||||    
T  2768228 agagatgataaaaacataatgtgagtatgagagagaa--ttgtcaaaaagttatcataaaacggttgtacaaatatcatttctc 2768147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 3950170 - 3950110
Alignment:
Q  77 agtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| |||| |||||||| ||||||||||||  |||||| || ||| ||||||||||||||    
T  3950170 agtacaagaaagaaaattatcaaaaaattataataaaatggttgtacaaatatcatttctc 3950110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 5924878 - 5924810
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| ||||  |||||||||  ||||||||  |||  |||||||||||||    
T  5924878 atcatgtgagtatgagagagaaagttgtacaaaaattattataaaatagatgtacgaatatcatttctc 5924810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 20065685 - 20065645
Alignment:
Q  68 tatcatgtgagtataagagagaaaattgtcaaaaaattatc 108  Q
    ||||| || ||||| ||||||||||||||||||||||||||    
T  20065685 tatcaagtaagtatgagagagaaaattgtcaaaaaattatc 20065645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 28623079 - 28623187
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||| |||||||||  |||||||  |||| | | |||| ||||||| | ||||||| |||||||||| |||||  | ||| || ||| ||||||||||    
T  28623079 attggtcaaaaacaatggagagagagaataaaaatctcatatgagtatgaaagagaaagttgtcaaaaagttatcacataatggttgtacaaatatcatt 28623178  T
Q  134 tctcgtaaa 142  Q
    |||| ||||    
T  28623179 tctcataaa 28623187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 39359803 - 39359743
Alignment:
Q  70 tcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatc 130  Q
    |||||||||||| ||||||||||||||| ||||||| ||  ||||| || ||| |||||||    
T  39359803 tcatgtgagtatgagagagaaaattgtccaaaaattgtcagaaaatggttgtacaaatatc 39359743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 2211 - 2297
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  || ||||||||||||||||||||||| |||||||||||| | |||||  | ||| ||||||||||||||    
T  2211 aagagagaggataataacatgatgtgagtataagagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttctc 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 43755663 - 43755749
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| || ||||||| | |||||||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  43755663 aagagagagaataagagtataatatgagtatgaaagagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcatttctc 43755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 49699755 - 49699823
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||||||| ||||| |||| ||||||||||| |||||| || ||| ||||||||||||||    
T  49699755 atcatgtgagtataagaaagaaagttgttaaaaaattatcataaaatggttgtacaaatatcatttctc 49699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 37515981 - 37515935
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagt 118  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  37515981 atgtgagtatgagagagaaaattgtcaaaaaattatcataaaatagt 37515935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 45042347 - 45042261
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||| ||||||||||||||||| |   |||||||| ||| ||||||||||||||    
T  45042347 aagagagagaataagagtataatgtgagtatgagagaaaaaattgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 45042261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 27563549 - 27563484
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||||||||||||||||||| | |||||  | ||| ||||||||||||||    
T  27563549 atgtgagtatgagagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcatttctc 27563484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 43056803 - 43056711
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||||| ||||| | | |||||||||||| ||||||||| ||||| ||||||||| | ||||| || ||| |||||||||| ||| ||||    
T  43056803 aaagagagaggataagaatgtcatgtgagtatgagagagaaagttgtccaaaaattattgcaaaatggttgtacaaatatcattcctcctaaa 43056711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 37843417 - 37843503
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||| ||||| |||||||||| ||||||||| |||||| ||| || ||  ||| |||| ||| ||||||||||||||    
T  37843417 aagagagataataagagtataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaagtagttgtacaaatatcatttctc 37843503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 43196092 - 43196165
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||||||||| |||||||||||||||||||| || | | ||||| |  ||| |||||||||||||| ||||    
T  43196092 atcatgtgagtatgagagagaaaattgtcaaaaagttgtagcaaaatggatgtacaaatatcatttctcttaaa 43196165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 49596300 - 49596235
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||||||||||| |  |||||| || ||| ||||||||||||||    
T  49596300 atgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctc 49596235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 366733 - 366657
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| ||||||||| |||||||||| |||||  ||| | || ||| ||||||||||||||    
T  366733 ataagagtataatgtgagtatgagagagaaagttgtcaaaaagttatcagaaagtggttgtataaatatcatttctc 366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 41882228 - 41882292
Alignment:
Q  266 attggatcaaatgaagaacacagtactatcatggactctt-aacattagata-ttttcacactct 328  Q
    ||||||||||||||||||||  ||| |||||||||||||| |||| |||||| ||||||||||||    
T  41882228 attggatcaaatgaagaacatggtattatcatggactcttaaacactagatatttttcacactct 41882292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 51250253 - 51250346
Alignment:
Q  42 aaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||  |||| | ||| | |||||||| ||||||||| ||||||||||| | |  |||||| || ||| ||||||||||||||    
T  51250253 aaaacaataaagagaga--ataagaatataacgtgagtatgagagagaaagttgtcaaaaaactgtattaaaatggttgtacaaatatcatttctc 51250346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 52283712 - 52283780
Alignment:
Q  79 tataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaa 146  Q
    |||||||||||||||||||| ||| ||||||  ||||| || ||||||||||||||||||  |||||||    
T  52283712 tataagagagaaaattgtcataaatattatcaaaaaatggttgtagaaatatcatttctctaaaattaa 52283780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 3919395 - 3919300
Alignment:
Q  42 aaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||||||||||  |||| | ||| ||| |||||| ||||||||| ||||| |||||||||   ||||| || ||| ||||||||||||||    
T  3919395 aaaaaaataaagagagagaataagaatataatgcgagtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 32196703 - 32196668
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattat 107  Q
    |||||||||| |||||||||||||||||||||||||    
T  32196703 atgtgagtatgagagagaaaattgtcaaaaaattat 32196668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 32938942 - 32938859
Alignment:
Q  54 agagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||| |||| ||||| |||| ||||||||||||||| |||| |||||||| ||  ||| || | ||| ||||||||||||||    
T  32938942 agagataataaaagtataatgtaagtataagagagaaagttgttaaaaaattgtcacaaattaattgtacaaatatcatttctc 32938859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 33669785 - 33669848
Alignment:
Q  42 aaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||||||||||||  |||| | ||| |||||||||| ||||| ||| |||||||||||||    
T  33669785 aaaacaataaagagagaaaataagaatataatgtgagtatgagagaaaaagttgtcaaaaaatt 33669848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 44112540 - 44112449
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||||  |||| | ||| |||||||||| ||||||||| ||||||||||||| |  |||| | || ||| |||||||||||||| ||||    
T  44112540 aagagagagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctcttaaa 44112449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 45350079 - 45350166
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||  |||| | ||| |||||||||| ||||| |||||| || ||||||||||  |||||| | ||| ||||||||||||||    
T  45350079 aaagagagaaaataagaatataatgtgagtatgagagaaaaaattatctaaaaattatcacaaaataattgtacaaatatcatttctc 45350166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 1689457 - 1689391
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||| ||||||| |  ||||||||| ||| ||||||||||||||    
T  1689457 atgtgagtatgagagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttctc 1689391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 7203829 - 7203915
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||| | | |||||||||||| ||||||||| ||||| ||||||| | | ||||| ||  || ||||||||||||||    
T  7203829 aagagagaggataagaatgtcatgtgagtatgagagagaaagttgtctaaaaattgttgcaaaatggttatacaaatatcatttctc 7203915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 8464498 - 8464584
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||| |||||||||||||||||||| || |  |||| | || ||| ||||||||||||||    
T  8464498 aagagagagaataagaatataatgtgagtatgagagagaaaattgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 8464584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 30439336 - 30439250
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| || || |||||||||| ||||| ||| ||||||||||||| || |||| | || ||| ||||||||||||||    
T  30439336 aagagagaaaataaaaggataatgtgagtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcatttctc 30439250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 40610315 - 40610229
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||||||  ||||||||||||| || ||||||    ||| ||||||||||||||    
T  40610315 aagagagagaataagagtataatgtgagtatgagagagaaggttgtcaaaaaattgtcataaaatgaatgtataaatatcatttctc 40610229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 44641888 - 44641974
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||| ||||||||| ||||||||||||| |  |||| | || ||| ||||||||||||||    
T  44641888 aagagagagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctc 44641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 46281502 - 46281436
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||| |||||||||   |||||||| ||| ||||||||||||||    
T  46281502 atgtgagtatgagagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctc 46281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 14247728 - 14247667
Alignment:
Q  73 tgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    ||||||||| ||||||||| ||||||||||||||||  ||| | || ||| |||||||||||    
T  14247728 tgtgagtatgagagagaaagttgtcaaaaaattatcacaaagtcgttgtacaaatatcattt 14247667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 18610838 - 18610773
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||| ||||| || ||  |||||||| ||| ||||||||||||||    
T  18610838 atgtgagtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 27352695 - 27352630
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| |||| |||||  ||||| || ||| ||||||||||||||    
T  27352695 atgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 40605427 - 40605492
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||||||||||||| ||||| ||||||||||  ||||  || ||| ||||||||||||||    
T  40605427 atgtaagtataagagagaaagttgtctaaaaattatcaaaaaaaggttgtacaaatatcatttctc 40605492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 49621428 - 49621363
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| |||||||||   ||||| || ||| ||||||||||||||    
T  49621428 atgtgagtatgagagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttctc 49621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 50797866 - 50797813
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaat 104  Q
    |||||||||||||| | | |||||||||||| ||||||||| |||||| |||||    
T  50797866 aagagagatgataagaatgtcatgtgagtatgagagagaaagttgtcacaaaat 50797813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 7371959 - 7372019
Alignment:
Q  77 agtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||| ||||||||||||||  ||||||| || |||| |||| ||| ||||||||||||||    
T  7371959 agtatgagagagaaaattgtacaaaaattgtcataaattagttgtacaaatatcatttctc 7372019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 8846042 - 8846002
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtca-aaaaattatc 108  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  8846042 atcatgtgagtatgagagagaaaattgtcacaaaaattatc 8846002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 18959069 - 18959005
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||||| |||||||||||||||||||| || |   ||||| || ||| |||||||||||||    
T  18959069 atgtgagtatgagagagaaaattgtcaaaaagttgtaacaaaatggttgtataaatatcatttct 18959005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 31834045 - 31834105
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcat 132  Q
    |||| ||||| |||||||||||||||||||||||||   ||||||||  || |||||||||    
T  31834045 atgtaagtatgagagagaaaattgtcaaaaaattatacaaaaatagttttacaaatatcat 31834105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 33660131 - 33660071
Alignment:
Q  47 aataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattat 107  Q
    ||||| |||||| || ||||| ||||||||||||| | |||||||||| || |||||||||    
T  33660131 aataaggagagaggaaaatagcatcatgtgagtatgaaagagaaaattatccaaaaattat 33660071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 44161740 - 44161840
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||| |||||||||| |||||||  | || | |||  ||||| ||| ||||||||||||||| |||||||||   ||||||||  || ||||||||||    
T  44161740 attggtcaaaaacaatagagagagaaaaaaaaaatatagtgtgaatatgagagagaaaattgtccaaaaattataccaaaatagttatacaaatatcatt 44161839  T
Q  134 t 134  Q
    |    
T  44161840 t 44161840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 47398457 - 47398489
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaat 104  Q
    |||||||||| ||||||||||||||||||||||    
T  47398457 atgtgagtatgagagagaaaattgtcaaaaaat 47398489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 51193134 - 51193202
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| ||||| ||||||| |  |||||| |  ||| ||||||||||||||    
T  51193134 atcatgtgagtatgagagagaaagttgtccaaaaattgttataaaatggatgtacaaatatcatttctc 51193202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 52369095 - 52369179
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||||||||  |||| | ||| |||||||||| ||||| ||| |||||||||| ||||  |||| |||| ||| |||||||||||    
T  52369095 aaagagagagaataaaaatataatgtgagtattagagaaaaagttgtcaaaaagttataataaagtagttgtacaaatatcattt 52369179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 36067 - 36002
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||||| ||||||||||||||||  ||| |||| ||| ||||||||||||||    
T  36067 atgtgagtataagagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctc 36002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 54165147 - 54165232
Alignment:
Q  52 agagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| |||||||  ||||||||||||| ||||| ||| ||||||||||||| | ||||||| || ||| ||||||||||||||    
T  54165147 agagagaggataataacatcatgtgagtatgagagaaaaagttgtcaaaaaattgtagtaaaatggttgtacaaatatcatttctc 54165232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 51224822 - 51224909
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||||||  ||||||||||||| ||||||||| |||||||||| || | | ||||| || ||| ||||||||||||||    
T  51224822 aaagagagaggataataacatcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 51224909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 9472519 - 9472584
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||||||||||||   |||||||| ||| ||||||||||||||    
T  9472519 atgtgagtatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctc 9472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 36123008 - 36123074
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaa 102  Q
    |||||| |||||||||| |||||||  |||| ||||| |||||||||||| ||||||||||||||||||    
T  36123008 attggtcaaaaacaatagagagaga--ataagagtataatgtgagtataaaagagaaaattgtcaaaaa 36123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 31048975 - 31048923
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaa 102  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||||||||||    
T  31048975 aaagagagaggataataatatcatgtgagtatgagagagaaagttgtcaaaaa 31048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 36444390 - 36444466
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| ||||||||| |||| ||||| ||||| |||||| || ||| ||||||||||||||    
T  36444390 ataaaagtataatgtgagtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 35332771 - 35332696
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaat 147  Q
    |||||||||| ||||||||| || ||||||||||||| |||| | || ||| |||||||||||||| |||| ||||    
T  35332771 atgtgagtatgagagagaaagttatcaaaaaattatcataaagtggttgtacaaatatcatttctcataaaataat 35332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 45779275 - 45779362
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||  ||||||  ||||| ||||||| ||| ||||| |||||||||||||||   |||||||| ||| ||||||||||||||    
T  45779275 aaagagagagaataataacatcatatgagtatgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcatttctc 45779362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 12074136 - 12074222
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||| ||| ||| ||| ||||||||||||||| || |||||| || ||| ||||||||||||||    
T  12074136 aagagagagaataagagtataatgtgaatatgagaaagagaattgtcaaaaaattgtcataaaatggttgtacaaatatcatttctc 12074222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 32901415 - 32901329
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||| | | |||||||||||| | ||||||| ||||  ||||||||||  |||||||| ||| ||||||||||||||    
T  32901415 aagagagataataagaatgtcatgtgagtatgaaagagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcatttctc 32901329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 44165995 - 44165909
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| || || |||||||||| ||||||||| ||||||||||||| ||| ||| | || ||| ||||||||||||||    
T  44165995 aagagagagaataagagaataatgtgagtatgagagagaaagttgtcaaaaaattgtcgcaaagtggttgtacaaatatcatttctc 44165909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 17805517 - 17805460
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatat 129  Q
    |||||||||| |||||||||||||||||||||||||   |||||||| ||| ||||||    
T  17805517 atgtgagtatgagagagaaaattgtcaaaaaattattaaaaaatagttgtacaaatat 17805460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 18880850 - 18880785
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||||||||| |||| ||||| |||||| || ||| | ||||||||||||    
T  18880850 atgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgtacatatatcatttctc 18880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 45548769 - 45548854
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||| ||||||   ||||||||||||| | ||| ||| ||||||||||||||||  ||||| || ||| |||||||||||||    
T  45548769 aagagagaggataatgacatcatgtgagtatgaaagaaaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct 45548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 24209794 - 24209858
Alignment:
Q  73 tgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| ||||||||||||||| ||||||| ||  ||| | |||||| ||||||||||||||    
T  24209794 tgtgagtatgagagagaaaattgtctaaaaattgtcacaaagtggtcgtataaatatcatttctc 24209858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 29384192 - 29384268
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||||||||||||| |||| |||||||| || |||| |  | ||| ||||||||||||||    
T  29384192 ataaaagtataatgtgagtataagagagaaagttgttaaaaaattgtcataaagtgattgtacaaatatcatttctc 29384268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 29513699 - 29513767
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| |||||||||| || | | ||||| || ||| ||||||||||||||    
T  29513699 atcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 29513767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 31833230 - 31833278
Alignment:
Q  89 aaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||||| |||||||||  || ||||||||||||||    
T  31833230 aaaattgtcaaaaaattatcataaaatagttataaaaatatcatttctc 31833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 34116535 - 34116611
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||| |||||||||||||||||||| || ||  ||| | || ||| ||||||||||||||    
T  34116535 ataagagtataatgtgagtatgagagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 34116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 40721967 - 40722035
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| ||||| |||||||||  |||||| |  ||| ||||||||||||||    
T  40721967 atcatgtgagtatgagagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 56025324 - 56025256
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||||||| |||||||||| || | | ||||| || ||| ||||||||||||||    
T  56025324 atcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 56025256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 20056499 - 20056396
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatt 133  Q
    |||||| |||||||||  |||||||  |||| | | |||||||| ||| ||||||||| ||||| |||||||||   | |||||| ||| ||||||||||    
T  20056499 attggtcaaaaacaattgagagagaaaataagaatctcatgtgactatgagagagaaagttgtccaaaaattataacataatagttgtacaaatatcatt 20056400  T
Q  134 tctc 137  Q
    ||||    
T  20056399 tctc 20056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 39449237 - 39449163
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaat 147  Q
    |||||||||| ||||| ||||||||| |||| |||||  |||||||| ||| |||||||||||||| ||| |||||    
T  39449237 atgtgagtatgagagaaaaaattgtc-aaaagttatcacaaaatagttgtataaatatcatttctcttaatttaat 39449163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 52224169 - 52224094
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||| ||||| ||||||||||  |||||||| |||||||||||||||| |||| | || |||  ||||||||||||    
T  52224169 ataagagtataatgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtggttgtactaatatcatttct 52224094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 52911795 - 52911830
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattat 107  Q
    |||||||||| |||||||||||||||||||||||||    
T  52911795 atgtgagtatgagagagaaaattgtcaaaaaattat 52911830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 24772757 - 24772671
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||||||  |||||||||| || || |||||| |  ||| ||||||||||||||    
T  24772757 aagagagagaataagagtataatgtgagtatgagagagaaggttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 24772671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 25139964 - 25140026
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| ||||||||||||||||||||||| |  |||| | || ||| ||||||||||||||    
T  25139964 tgagtatgagagagaaaattgtcaaaaaattgtaataaagtggttgtacaaatatcatttctc 25140026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 35017239 - 35017153
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||||||||| |||| ||||| ||||| ||| |||| ||||| || ||  |||||||| ||| ||||||||||||||    
T  35017239 aagagagagaataatagtataatgttagtatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 39010122 - 39010208
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||| |  ||||| ||||||| |||||||||  ||||||||| || ||  ||||| || ||| ||||||||||||||    
T  39010122 aagagagatgataagaacatcatttgagtatgagagagaaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 39010208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 44170604 - 44170690
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||| | |||||  |||||||| |||||||||||||||   ||||| || ||| ||||||||||||||    
T  44170604 aagagagaggataataacatcatataagtatgtgagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctc 44170690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 46794486 - 46794572
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||||||| |||||||||| || ||  ||| | || ||| ||||||||||||||    
T  46794486 aagagagagaataagagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 46794572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 46844245 - 46844311
Alignment:
Q  70 tcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    |||||||||||| ||||||||| ||||||||||||| |   |||||||| ||| | |||||||||||    
T  46844245 tcatgtgagtatgagagagaaagttgtcaaaaaattgttacaaaatagttgtacagatatcatttct 46844311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 49194969 - 49194884
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||| | |||||||||||||||||||| ||||||||| ||| || | |||| || ||| ||||||||||||||    
T  49194969 aagagagagaataagagtctaatgtgagtataagagagaaagttgtcaaaagattgtcat-aaatggttgtacaaatatcatttctc 49194884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 49585060 - 49584994
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||  |||||||||   ||||| |||||||||||||||||||||    
T  49585060 atgtgagtatgagagagaaagttgtcccaaaaattattagaaaatggtcgtagaaatatcatttctc 49584994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 54251435 - 54251521
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| || ||||||| || |||||| ||||| |||||||||   |||||||| ||| ||||||||||||||    
T  54251435 aagagagaaaataagagtataatatgagtatgagggagaaagttgtcgaaaaattattaaaaaatagttgtacaaatatcatttctc 54251521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 12241123 - 12241058
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||||||| || |   |||||||| ||| ||||||||||||||    
T  12241123 atgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 12241058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 18568817 - 18568886
Alignment:
Q  68 tatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||||| ||| ||||| |||| || ||  ||||| || ||| ||||||||||||||    
T  18568817 tatcatgtgagtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctc 18568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 25523204 - 25523269
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||||||| || |   |||||||| ||| ||||||||||||||    
T  25523204 atgtgagtatgagagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctc 25523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 29694059 - 29694124
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| | |||||||||| || ||||||||||  |||||| | ||||||||||||||||||    
T  29694059 atgtaagtatgaaagagaaaattatctaaaaattatcacaaaataatagtagaaatatcatttctc 29694124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 30866418 - 30866353
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| | ||||||| |||||||||| ||||| ||||||  | ||| ||||||||||||||    
T  30866418 atgtgagtatgaaagagaaagttgtcaaaaatttatcataaaatgattgtacaaatatcatttctc 30866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 33820342 - 33820407
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| |||||||||| || |   |||||||| ||| ||||||||||||||    
T  33820342 atgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 33820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 40755986 - 40755921
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| |||||||||||| |||||||||| |   ||||| || ||| ||||||||||||||    
T  40755986 atgtgagtatgagagagaaaattatcaaaaaattgttagaaaatggttgtacaaatatcatttctc 40755921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 44368187 - 44368232
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgt 96  Q
    |||||||||||||| |  ||||||||||||||||||||||| ||||    
T  44368187 aagagagatgataagaccatcatgtgagtataagagagaaagttgt 44368232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 47376913 - 47376966
Alignment:
Q  267 ttggatcaaatgaagaacacagtactatcatggactcttaacattagatatttt 320  Q
    |||||| ||||||||||||  ||| ||| |||||||||||||| ||||||||||    
T  47376913 ttggattaaatgaagaacatggtattattatggactcttaacactagatatttt 47376966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 48722134 - 48722069
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| |||||||||||||||||||| || | | ||||| |  ||| ||||||||||||||    
T  48722134 atgtgagtatgagagagaaaattgtcaaaaagttgttgcaaaatggatgtacaaatatcatttctc 48722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 48743775 - 48743742
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||||| |||||||||||||||||||||||    
T  48743775 atgtgagtatgagagagaaaattgtcaaaaaatt 48743742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 49768875 - 49768940
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||||||||||| | | ||||| |  ||| ||||||||||||||    
T  49768875 atgtgagtatgagagagaaagttgtcaaaaaattgttgcaaaatggatgtacaaatatcatttctc 49768940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 52891856 - 52891921
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||||| |||||||||| || |   |||||||| ||| | ||||||||||||    
T  52891856 atgtgagtataagagagaaagttgtcaaaaagttcttagaaaatagttgtacacatatcatttctc 52891921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 53357083 - 53357148
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||||||||||| |   ||||||||  || ||||||||||||||    
T  53357083 atgtgagtatgagagagaaagttgtcaaaaaattgttagaaaatagttatacaaatatcatttctc 53357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 55960254 - 55960189
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||| ||| ||||||||  |||||||||  ||||||| | ||| ||||||||||||||    
T  55960254 atgtgagtataaaagataaaattgttgaaaaattataataaaataattgtataaatatcatttctc 55960189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 55996487 - 55996454
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||||||||| |||||||||||||||||||||||    
T  55996487 atgtgagtatgagagagaaaattgtcaaaaaatt 55996454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 925066 - 925130
Alignment:
Q  70 tcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||||||||||| ||||||||||||||| |||| || ||  ||||| || ||| |||||||||||    
T  925066 tcatgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcattt 925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 34114125 - 34114185
Alignment:
Q  74 gtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||||||| ||||| ||| |||||||||| ||||  ||||||||| ||| |||||||||||    
T  34114125 gtgagtatgagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcattt 34114185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 53662403 - 53662499
Alignment:
Q  41 aaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| ||||||||  |||| |  ||||||||| ||| ||||||||| ||||  ||||||| |   |||||||| ||| ||||||||||||||    
T  53662403 aaaaacaatgaagagagagaataagaacatcatgtgaatatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctc 53662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 17061 - 16975
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  ||||||  ||||||||||||| ||||||||| |||||||||| || | ||||||| || ||| ||||||||||||||    
T  17061 aagagagagaataataacatcatgtgagtatgagagagaaagttgtcaaaaagttgtagtaaaatggttgtacaaatatcatttctc 16975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 41877774 - 41877688
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| |||||||  ||||||||||||| ||||||||| |||||||||| || | | ||||| || ||| ||||||||||||||    
T  41877774 aagagagaggataataacatcatgtgagtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 41877688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 47849759 - 47849672
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||  |||| ||||| ||||||||||   ||||||| ||||||||||||||||  ||||| || ||| ||||||||||||||    
T  47849759 aaagagagagaataagagtataatgtgagtatgtaagagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctc 47849672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 52727433 - 52727524
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||||  |||| ||||| ||||||||||  |||||||| |||||||||||||||| |||| |  | ||| |||||||||||||| ||||    
T  52727433 aagagagagaataagagtataatgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtgattgtacaaatatcatttctcttaaa 52727524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 29705989 - 29705903
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| || || |||||||||| | |||||||||| |||||||||||||  |||||| | ||| ||||||||||||||    
T  29705989 aagagagagaataagagaataatgtgagtatgaaagagaaaattatcaaaaaattatcacaaaataattgtataaatatcatttctc 29705903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 42424296 - 42424210
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||| | ||| |||||||||||||||| ||| |||||||||| ||||  |||| | |||||| |||||||| |||||    
T  42424296 aagagagaagataagaatataatgtgagtataagagataaagttgtcaaaaagttataataaagtggtcgtacaaatatcaattctc 42424210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 49196782 - 49196696
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| |||||||||||||||| ||| || ||  ||||| || ||| ||||||||||||||    
T  49196782 aagagagagaataagagtataatgtgagtatgagagagaaaattgtcacaaagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 55344281 - 55344367
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||| | ||| ||| |||||| | ||||||||||||||| || |||||  ||||| || ||| ||||||||||||||    
T  55344281 aagagagatgataaaaatataatgcgagtatgaaagagaaaattgtcaagaagttatcacaaaatggttgtacaaatatcatttctc 55344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 33256378 - 33256309
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||||||||||||||||||| ||||||| ||  ||||| || ||| ||||||||||||||    
T  33256378 atcatgtgcgtataagagagaaaattgtcataaaaattgtctcaaaatggttgtataaatatcatttctc 33256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 39604241 - 39604317
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| |||||||||  ||||||||| ||||||||||||| | | ||||| || ||| ||||||||||||||    
T  39604241 ataagagtataatgtgagtaagagagagaaagttgtcaaaaaattgttgaaaaatggttgtacaaatatcatttctc 39604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 49130940 - 49130852
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgt 139  Q
    ||||||||  |||| ||||| |||||||||| | ||||||  ||||||||||||| || |||||||   ||| ||||||||||||||||    
T  49130940 aagagagagaataagagtataatgtgagtatgaaagagaaggttgtcaaaaaattgtcataaaataaatgtacaaatatcatttctcgt 49130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 103
Target Start/End: Original strand, 7668193 - 7668224
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaa 103  Q
    ||||||||||||||||||||||||||||||||    
T  7668193 atgtgagtataagagagaaaattgtcaaaaaa 7668224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 25142714 - 25142663
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaa 102  Q
    |||||||| |||||||  ||||||||||||||||||| |||||||| |||||    
T  25142714 aagagagaggataataacatcatgtgagtataagagataaaattgttaaaaa 25142663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 40419645 - 40419712
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttct 136  Q
    ||||||||| ||| ||||||||||||||| ||||||||||  |||||  | ||| |||||||||||||    
T  40419645 atcatgtgaatatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 108517 - 108431
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| || || |||||||||| ||||||||| ||||||||||||| ||  ||| | || ||| ||||||||||||||    
T  108517 aagagagagaataagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctc 108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 4494242 - 4494308
Alignment:
Q  72 atgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||||| |||||| ||||||||||  ||||||||  |  ||||||||||||||    
T  4494242 atgtgagtataagagagaaagttgtcacaaaaattatcaaaaaatagttattcaaatatcatttctc 4494308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 9582144 - 9582230
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||| | | |||||||||||||| ||||||||| || |  |||||||||| |||| || | ||| ||||||||||||||    
T  9582144 aagagagaggatgaaaatatcatgtgagtatcagagagaaatttatataaaaattatcataaagtaattgtataaatatcatttctc 9582230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 26279970 - 26279884
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| |||  ||||| |||||||||| ||||||||| |||||||||| || ||  ||| | || ||| ||||||||||||||    
T  26279970 aagagagataatatgagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 26279884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 28300348 - 28300286
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||| ||| ||| |||||||||||||||  |||||| || ||| ||||||||||||||    
T  28300348 tgagtataaaagaaaaagttgtcaaaaaattataataaaatggttgtacaaatatcatttctc 28300286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 31176449 - 31176511
Alignment:
Q  75 tgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||||||| ||||| ||||||||||  ||| | || ||| ||||||||||||||    
T  31176449 tgagtataagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctc 31176511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 46473193 - 46473119
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaattaa 146  Q
    |||||||||| |||||||||||||| ||||| || ||| ||| | || ||| |||||||||||||| ||| ||||    
T  46473193 atgtgagtatgagagagaaaattgttaaaaagttgtcgcaaagtggttgtacaaatatcatttctcttaatttaa 46473119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 47056511 - 47056597
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||| ||||| | | |||||||||||| ||||||||| ||||| ||||||| | | ||||| || | | ||||||||||||||    
T  47056511 aagagagaagataaaaatgtcatgtgagtatgagagagaaagttgtccaaaaattgttgcaaaatggttgcacaaatatcatttctc 47056597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 1295397 - 1295332
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||| ||| ||||| |||| |||||  |||||||| ||| ||||||||||||||    
T  1295397 atgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 12094395 - 12094460
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||| | || | |||||||| || ||||||||| ||| ||||||||||||||    
T  12094395 atgtgagtatgagagagacattttttaaaaaattgtcataaaatagttgtataaatatcatttctc 12094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 32580683 - 32580724
Alignment:
Q  101 aaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    |||||||| ||||||||||||| |||||||||||||| ||||    
T  32580683 aaattatcataaaatagtcgtataaatatcatttctcttaaa 32580724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 43409368 - 43409433
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||||||||| || || ||||||||||  ||| | || ||| ||||||||||||||    
T  43409368 atgtgagtataagagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttctc 43409433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 51032630 - 51032695
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| |||||||||||||||||||| || |   ||||| || ||| ||||||||||||||    
T  51032630 atgtgagtatgagagagaaaattgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 51032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 53932393 - 53932462
Alignment:
Q  68 tatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||||| |||| |||| ||||| ||||||| ||  ||||| || ||| ||||||||||||||    
T  53932393 tatcatgtgagtatgagagtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctc 53932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 7949859 - 7949791
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||| ||||| |||||||||| || | | ||||| || ||| ||||||||||||||    
T  7949859 atcatgtgagtatgagaaagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 7949791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 8627922 - 8627890
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaat 104  Q
    |||||||||| ||||||||||||||||||||||    
T  8627922 atgtgagtatgagagagaaaattgtcaaaaaat 8627890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 28920058 - 28920126
Alignment:
Q  75 tgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaa 142  Q
    ||||||| ||||||||| |||||| |||||||||  | ||||||| ||| |||||||||||||| ||||    
T  28920058 tgagtatgagagagaaagttgtcacaaaaattattatcaaatagttgtacaaatatcatttctcttaaa 28920126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 37134625 - 37134677
Alignment:
Q  85 agagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| |||| |||||||| || ||||||||| ||| ||||||||||||||    
T  37134625 agagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 39540322 - 39540270
Alignment:
Q  50 aaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaa 102  Q
    |||||||||  |||| || || |||||||||| ||||||||||||||||||||    
T  39540322 aaagagagaaaataagagaataatgtgagtatgagagagaaaattgtcaaaaa 39540270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 395908 - 395855
Alignment:
Q  90 aaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctcgtaaat 143  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  395908 aaattgtcaaaaaattatcacaaaagagttgtagaaatatcatttctcgtaaat 395855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 4401 - 4315
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| | ||| |||||||||| ||| ||||| |||||||||| ||||| |||||| || ||| ||||||||||||||    
T  4401 aagagagagaataagaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttctc 4315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 199350 - 199266
Alignment:
Q  53 gagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||| |||| | ||| |||||||||| ||||||||| ||||||||||||| |  |||| | || ||| ||||||||||||||    
T  199350 gagagataataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctc 199266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 2508 - 2575
Alignment:
Q  70 tcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||||| ||||||||| ||||| ||||||||||  | |||||  ||| ||||||||||||||    
T  2508 tcatgtgagtatgagagagaaagttgtccaaaaattatcacataatagatgtacaaatatcatttctc 2575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 26517 - 26415
Alignment:
Q  42 aaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtca-aaaaattatcgtaaaatagtcgtagaaatatcatttctcgta 140  Q
    |||||||| ||||||||   ||| ||||| |||||||||||||| | |||||||||| |||| ||||| |||||  || ||  |||||||||||||| ||    
T  26517 aaaacaatgaagagagaaattaaaagtataatgtgagtataagaaaaaaaattgtcacaaaagttatcataaaacggttgtttaaatatcatttctcata 26418  T
Q  141 aat 143  Q
    |||    
T  26417 aat 26415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 6513 - 6427
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||  |||| ||||| |||||||||| ||||||||  |||||||||| || || |||||| |  ||| ||||||||||||||    
T  6513 aagagagagaataagagtataatgtgagtatgagagagaatgttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 6427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 440783 - 440718
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||||||||| ||||||||| ||||| |||| || || |||| |||| ||| ||||||||||||||    
T  440783 atgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcatttctc 440718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 8958 - 9023
Alignment:
Q  72 atgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||| |||| |||||||||||||||| ||| |||||| ||| |||| ||  ||||||||||||||    
T  8958 atgtgtgtatgagagagaaaattgtcacaaagttatcgaaaagtagttgttcaaatatcatttctc 9023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 31585 - 31638
Alignment:
Q  51 aagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaaaat 104  Q
    ||||||||  |||| ||||| |||||||||| ||||||||| ||||||||||||    
T  31585 aagagagagaataagagtataatgtgagtatgagagagaaagttgtcaaaaaat 31638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 34484 - 34411
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcattt 134  Q
    |||| ||||| |||||||||| ||||||||| |||||| ||| || ||  |||||||| ||| |||||||||||    
T  34484 ataagagtataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaaatagttgtacaaatatcattt 34411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 9497 - 9429
Alignment:
Q  69 atcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    ||||||||||||| ||||| ||| |||| |||||||| | | ||||| || ||| ||||||||||||||    
T  9497 atcatgtgagtatgagagacaaagttgttaaaaaattgtagcaaaatggttgtacaaatatcatttctc 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 11309 - 11244
Alignment:
Q  34 attggttaaaaacaataaagagagatgataatagtatcatgtgagtataagagagaaaattgtcaaaa 101  Q
    |||||| |||||||||  |||||||  |||| ||||| ||||||||||  ||||||||||||||||||    
T  11309 attggtcaaaaacaatggagagaga--ataagagtataatgtgagtatgtgagagaaaattgtcaaaa 11244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 38955 - 38911
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaatt 105  Q
    |||| ||||| ||||||||||| ||||||||||| ||||||||||    
T  38955 ataagagtataatgtgagtatatgagagaaaattttcaaaaaatt 38911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 190877 - 190953
Alignment:
Q  61 ataatagtatcatgtgagtataagagagaaaattgtcaaaaaattatcgtaaaatagtcgtagaaatatcatttctc 137  Q
    |||| ||||| | ||||||||  |||||||| |||||||||||||||| |||| | |  ||||| ||||||||||||    
T  190877 ataaaagtataacgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtggatgtagacatatcatttctc 190953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 554 times since January 2019
Visitors: 2229