View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0191_high_10 (Length: 311)
Name: NF0191_high_10
Description: NF0191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0191_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 7381280 - 7381065
Alignment:
| Q |
1 |
atctcacaactttatgtccttcttcagaattcataaaacaccctttggcaatcaaacttggtgtccaaagcatgtaccccataaccataagccacaagcc |
100 |
Q |
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| T |
7381280 |
atctcacaactttatgtccttcttcagaattcataaaacaccctttggcaattaaacttggtgtccaaagcatgtaccccataaccataagccacaagcc |
7381181 |
T |
|
| Q |
101 |
ttgaaaaaatatacttaatgatctcacaaaactaaccaagaagcttttttgcatgggaattcccaaaagggtagttgaaagagagacaaagacaagaact |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7381180 |
ttgaaaaaatatacttaatgatcttacaaaactaaccaagaagcttttttgcatgggaattcccaaaagggtagttgaaagagagacaaagacaagaact |
7381081 |
T |
|
| Q |
201 |
tgtaagagaagatggt |
216 |
Q |
| |
|
|||||||||||||||| |
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|
| T |
7381080 |
tgtaagagaagatggt |
7381065 |
T |
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