View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0191_low_10 (Length: 419)
Name: NF0191_low_10
Description: NF0191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0191_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 34860393 - 34860724
Alignment:
| Q |
14 |
agaggaaatgagctcttggcaacttgatcaatgtcttttaaagatatctcagcgtactctcttggctgcagaggtactcaatcaaagggacaattaattt |
113 |
Q |
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| T |
34860393 |
agaggaaatgagctcttggcaacttgatcaatgtcttttaaagatatctcagcgtactctcttggctgcagaggtactcaatcaaagggacaattaattt |
34860492 |
T |
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| Q |
114 |
ccaaaccaacatcacattaacacctaataatggtgacaaatgaacgaatataccacattaattacctgagaaaaatcaggacccagataacttgagctca |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34860493 |
ccaaaccaacatcacattaacacctaataatggtgacaaatgaacgaatataccacattaattacctgagaaaaatcaggacccagataacttgagctca |
34860592 |
T |
|
| Q |
214 |
aggcttccacaatctacaataaacctagtcaacatcaattaaaaggaaaggatatactgataaacaaagagcacgaccacacttacaggagtcaatctat |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34860593 |
aggcttccacaatctacaataaacctagtcaacatcaattaaaaggaaaggatatactgataaacaaagagcacgaccacacttacaggagtcaatctat |
34860692 |
T |
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| Q |
314 |
gtttctcctgttctctgattgatgatgtccat |
345 |
Q |
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|||||||||||||||||||||| ||||||||| |
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| T |
34860693 |
gtttctcctgttctctgattgaagatgtccat |
34860724 |
T |
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