View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0191_low_17 (Length: 340)
Name: NF0191_low_17
Description: NF0191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0191_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 93 - 329
Target Start/End: Original strand, 38289071 - 38289307
Alignment:
| Q |
93 |
cccgcaccaaacactccaaagaaaacacagatccaaaccccattgttccctcttctccttcccatcccaaattaaagtctcccttacccccaagacctcc |
192 |
Q |
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| T |
38289071 |
cccgcaccaaacactccaaagaaaacacagatccaaaccccattgttccctcttccccttcccatcccaaattaaagtctcccttacccccaagacctcc |
38289170 |
T |
|
| Q |
193 |
ttcctccaaccctctcaaacgcaagctcgccttagacgccctcgccgccgacaacaattctctccagccggcaacttccgattctggcgtcaaggtaata |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38289171 |
ttcctccaaccctctcaaacgcaagctcgccttagacgccctcgccgccgacaacaattctctccagccggcaacttccgattctggcgtcaaggtaata |
38289270 |
T |
|
| Q |
293 |
atttcccccaattcctagggtttcagatcttgttcat |
329 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
38289271 |
atttcccccaattcctagggtttcagatcttgttcat |
38289307 |
T |
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