View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0193_high_26 (Length: 251)
Name: NF0193_high_26
Description: NF0193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0193_high_26 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 32168459 - 32168702
Alignment:
| Q |
8 |
gagcagagagcttaaaccaataaaaccgaaaaagaaatggtaaagataattggaatgtttctgaaaatagcacttcatcaaaagtttggtcaaagagaaa |
107 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
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| T |
32168459 |
gagcagagagcttaaaccaatgaaaccgaaaaagaaatggtaaagataattggaatgtttctgaaaatagcactttatcaaaagtttggtcaaagagcaa |
32168558 |
T |
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| Q |
108 |
aatctttttacgtggaacaaaagaaagagaaataaacttcatataatttttataattaaagatgagtaatataaacannnnnnnnnnnnnnnnnnaggat |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32168559 |
aatctttttacgtggaacaaaagaaagagaaataaacttcatataatttttataattaaagatgagtaatataaacatttttttggattttttttaggat |
32168658 |
T |
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| Q |
208 |
ttatcaggaaattaaaatgatggtacatgtataaaatcgttttc |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32168659 |
ttatcaggaaattaaaatgatggtacatgtataaaatcgttttc |
32168702 |
T |
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