View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0193_high_6 (Length: 380)

Name: NF0193_high_6
Description: NF0193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0193_high_6
NF0193_high_6
[»] chr5 (23 HSPs)
chr5 (1-350)||(9842591-9842944)
chr5 (299-350)||(23556011-23556062)
chr5 (44-137)||(14495767-14495860)
chr5 (44-137)||(16773828-16773921)
chr5 (65-137)||(19949578-19949650)
chr5 (66-137)||(27840981-27841052)
chr5 (44-137)||(29075802-29075895)
chr5 (44-88)||(1410670-1410714)
chr5 (54-130)||(29692355-29692431)
chr5 (62-130)||(43442235-43442303)
chr5 (54-104)||(12883871-12883921)
chr5 (44-134)||(43241647-43241737)
chr5 (65-137)||(35982730-35982802)
chr5 (44-87)||(6844750-6844793)
chr5 (44-103)||(25627078-25627137)
chr5 (53-103)||(25979200-25979250)
chr5 (62-103)||(14285200-14285241)
chr5 (53-130)||(22020831-22020908)
chr5 (44-101)||(30883196-30883253)
chr5 (53-101)||(84854-84902)
chr5 (44-88)||(8278286-8278330)
chr5 (39-87)||(18169844-18169892)
chr5 (53-137)||(39327053-39327136)
[»] chr7 (35 HSPs)
chr7 (53-137)||(20335793-20335877)
chr7 (44-137)||(25590632-25590725)
chr7 (44-137)||(26526311-26526403)
chr7 (61-137)||(279916-279992)
chr7 (50-130)||(15137580-15137660)
chr7 (44-108)||(22760884-22760948)
chr7 (302-350)||(42434920-42434968)
chr7 (44-103)||(41519260-41519319)
chr7 (53-103)||(9871282-9871332)
chr7 (44-130)||(18056744-18056830)
chr7 (27-88)||(23301613-23301677)
chr7 (53-107)||(45709700-45709754)
chr7 (44-105)||(2446329-2446390)
chr7 (51-104)||(3174955-3175008)
chr7 (44-137)||(24513818-24513911)
chr7 (44-101)||(37085547-37085604)
chr7 (44-100)||(8108602-8108658)
chr7 (53-105)||(37117148-37117200)
chr7 (64-103)||(2882991-2883030)
chr7 (44-103)||(26459406-26459465)
chr7 (48-103)||(42262091-42262146)
chr7 (63-105)||(7309396-7309438)
chr7 (53-103)||(17041008-17041058)
chr7 (53-103)||(18363726-18363776)
chr7 (49-103)||(23552144-23552198)
chr7 (53-95)||(26703155-26703197)
chr7 (44-102)||(29385740-29385798)
chr7 (44-94)||(48771959-48772009)
chr7 (44-105)||(5668565-5668626)
chr7 (53-98)||(27776202-27776247)
chr7 (44-105)||(33362653-33362714)
chr7 (44-101)||(43590928-43590985)
chr7 (27-94)||(7801181-7801251)
chr7 (53-137)||(35513496-35513580)
chr7 (53-137)||(41519072-41519156)
[»] chr6 (23 HSPs)
chr6 (234-299)||(27917816-27917882)
chr6 (234-299)||(27921628-27921694)
chr6 (234-299)||(27913261-27913327)
chr6 (44-137)||(6385883-6385976)
chr6 (44-137)||(3779360-3779453)
chr6 (44-137)||(33549125-33549218)
chr6 (44-104)||(11423587-11423647)
chr6 (49-104)||(12633035-12633090)
chr6 (58-137)||(32050318-32050397)
chr6 (53-103)||(15951298-15951348)
chr6 (44-137)||(12234469-12234562)
chr6 (44-105)||(24507530-24507591)
chr6 (44-85)||(24641204-24641245)
chr6 (44-137)||(31622953-31623046)
chr6 (54-137)||(28363968-28364051)
chr6 (44-135)||(30127421-30127512)
chr6 (63-109)||(19162823-19162869)
chr6 (64-130)||(28841455-28841521)
chr6 (44-137)||(24333987-24334080)
chr6 (44-88)||(6758433-6758477)
chr6 (44-80)||(8268659-8268695)
chr6 (61-93)||(13661558-13661590)
chr6 (44-88)||(20863396-20863440)
[»] scaffold0299 (1 HSPs)
scaffold0299 (32-120)||(11534-11625)
[»] chr8 (26 HSPs)
chr8 (44-137)||(968383-968476)
chr8 (44-103)||(23361645-23361704)
chr8 (66-137)||(11928693-11928764)
chr8 (53-137)||(31087220-31087304)
chr8 (53-104)||(35641896-35641947)
chr8 (44-130)||(2203513-2203599)
chr8 (44-106)||(22193357-22193419)
chr8 (44-101)||(16852361-16852418)
chr8 (27-99)||(29858049-29858124)
chr8 (53-137)||(11819806-11819890)
chr8 (53-137)||(27750760-27750844)
chr8 (50-134)||(29018004-29018087)
chr8 (53-137)||(29431041-29431125)
chr8 (66-137)||(1157102-1157173)
chr8 (64-103)||(6536561-6536600)
chr8 (44-103)||(30483880-30483939)
chr8 (49-88)||(35583625-35583664)
chr8 (44-105)||(3624601-3624662)
chr8 (56-137)||(24675474-24675555)
chr8 (44-105)||(35287737-35287798)
chr8 (46-106)||(3524394-3524454)
chr8 (53-137)||(11492035-11492119)
chr8 (44-100)||(26688886-26688942)
chr8 (49-137)||(31088699-31088787)
chr8 (61-137)||(33727835-33727911)
chr8 (53-93)||(44780120-44780160)
[»] chr3 (32 HSPs)
chr3 (44-137)||(4844473-4844566)
chr3 (44-137)||(4870169-4870262)
chr3 (27-137)||(10499071-10499184)
chr3 (44-137)||(38550366-38550459)
chr3 (44-137)||(51903840-51903933)
chr3 (53-137)||(10445101-10445185)
chr3 (49-137)||(13808847-13808935)
chr3 (53-137)||(44743817-44743901)
chr3 (27-101)||(14339611-14339688)
chr3 (64-135)||(19716238-19716309)
chr3 (44-103)||(36720402-36720461)
chr3 (51-137)||(30715770-30715855)
chr3 (27-104)||(31520600-31520680)
chr3 (53-130)||(28531027-28531104)
chr3 (53-102)||(30311336-30311385)
chr3 (51-108)||(39253725-39253782)
chr3 (62-103)||(53412984-53413025)
chr3 (61-137)||(47810707-47810782)
chr3 (61-137)||(49452911-49452986)
chr3 (44-103)||(2667883-2667942)
chr3 (47-137)||(16212934-16213024)
chr3 (53-103)||(28703400-28703450)
chr3 (27-88)||(31608535-31608594)
chr3 (56-102)||(52769980-52770026)
chr3 (64-105)||(14186688-14186729)
chr3 (64-101)||(47454615-47454652)
chr3 (44-93)||(49494152-49494201)
chr3 (53-137)||(8075089-8075173)
chr3 (49-101)||(8501571-8501623)
chr3 (53-85)||(31788984-31789016)
chr3 (62-102)||(33899653-33899693)
chr3 (44-108)||(46518649-46518713)
[»] chr2 (25 HSPs)
chr2 (44-137)||(28846712-28846805)
chr2 (54-137)||(25637182-25637265)
chr2 (44-137)||(12086091-12086184)
chr2 (44-101)||(39715013-39715070)
chr2 (51-137)||(30907590-30907676)
chr2 (44-130)||(42327364-42327450)
chr2 (44-137)||(23230567-23230660)
chr2 (62-119)||(33839240-33839297)
chr2 (44-104)||(7799030-7799090)
chr2 (61-137)||(21195638-21195714)
chr2 (74-137)||(16951429-16951492)
chr2 (74-137)||(17022094-17022157)
chr2 (27-137)||(37480076-37480189)
chr2 (59-130)||(38551804-38551875)
chr2 (44-131)||(41202271-41202358)
chr2 (44-134)||(29197341-29197431)
chr2 (65-130)||(360712-360777)
chr2 (44-137)||(19016052-19016145)
chr2 (44-101)||(23052521-23052578)
chr2 (44-137)||(42602575-42602668)
chr2 (53-105)||(4262296-4262348)
chr2 (44-104)||(18259751-18259811)
chr2 (43-103)||(19244129-19244189)
chr2 (65-137)||(31573603-31573675)
chr2 (50-102)||(32650593-32650645)
[»] chr4 (32 HSPs)
chr4 (27-130)||(19238546-19238652)
chr4 (49-137)||(51948506-51948594)
chr4 (49-137)||(51954140-51954228)
chr4 (302-350)||(54079119-54079167)
chr4 (50-137)||(28635723-28635810)
chr4 (27-101)||(47044718-47044795)
chr4 (58-137)||(51969052-51969131)
chr4 (44-137)||(49576856-49576949)
chr4 (53-101)||(39509100-39509148)
chr4 (53-99)||(32046664-32046710)
chr4 (44-103)||(13015448-13015507)
chr4 (54-101)||(30938217-30938264)
chr4 (44-103)||(37109347-37109406)
chr4 (44-99)||(38869789-38869844)
chr4 (46-137)||(46295120-46295211)
chr4 (27-137)||(51250484-51250597)
chr4 (53-103)||(4249207-4249257)
chr4 (53-103)||(23377986-23378036)
chr4 (44-94)||(24827846-24827896)
chr4 (64-137)||(7949416-7949489)
chr4 (44-137)||(13496262-13496355)
chr4 (49-98)||(14451747-14451796)
chr4 (53-137)||(8030166-8030250)
chr4 (49-137)||(8931046-8931134)
chr4 (49-137)||(12821994-12822082)
chr4 (44-88)||(21660155-21660199)
chr4 (44-88)||(21668919-21668963)
chr4 (44-88)||(31759669-31759713)
chr4 (53-137)||(37274421-37274505)
chr4 (44-100)||(43728416-43728472)
chr4 (44-104)||(52254399-52254459)
chr4 (27-130)||(55427169-55427275)
[»] chr1 (40 HSPs)
chr1 (300-350)||(41703375-41703425)
chr1 (301-350)||(41697782-41697831)
chr1 (49-105)||(12587296-12587352)
chr1 (44-130)||(51814515-51814601)
chr1 (52-117)||(12259289-12259354)
chr1 (44-137)||(16893415-16893508)
chr1 (302-350)||(8017225-8017273)
chr1 (62-137)||(40257438-40257513)
chr1 (49-103)||(3265950-3266004)
chr1 (53-102)||(15786317-15786366)
chr1 (44-137)||(21547442-21547535)
chr1 (44-137)||(31794226-31794319)
chr1 (45-130)||(45266856-45266941)
chr1 (44-101)||(52116779-52116836)
chr1 (44-137)||(52336736-52336829)
chr1 (49-137)||(4280413-4280501)
chr1 (53-137)||(6122824-6122908)
chr1 (62-137)||(6948039-6948114)
chr1 (44-103)||(8177178-8177237)
chr1 (44-103)||(9165191-9165250)
chr1 (54-137)||(17410262-17410345)
chr1 (65-104)||(26232356-26232395)
chr1 (44-103)||(28411351-28411410)
chr1 (66-137)||(30203189-30203260)
chr1 (44-103)||(33700769-33700828)
chr1 (53-103)||(2799892-2799942)
chr1 (49-103)||(8904440-8904494)
chr1 (50-88)||(17439944-17439982)
chr1 (53-103)||(21267989-21268039)
chr1 (44-137)||(1094546-1094639)
chr1 (44-137)||(9643771-9643864)
chr1 (49-130)||(9964464-9964545)
chr1 (54-103)||(10150865-10150914)
chr1 (44-137)||(24047064-24047157)
chr1 (44-137)||(25494031-25494124)
chr1 (64-137)||(29738239-29738312)
chr1 (66-130)||(2220015-2220079)
chr1 (53-137)||(9117149-9117233)
chr1 (53-105)||(12370193-12370245)
chr1 (26-137)||(44126395-44126509)
[»] scaffold0258 (1 HSPs)
scaffold0258 (44-137)||(15285-15378)
[»] scaffold0118 (1 HSPs)
scaffold0118 (44-130)||(41602-41688)
[»] scaffold0194 (1 HSPs)
scaffold0194 (44-117)||(13028-13101)
[»] scaffold0337 (1 HSPs)
scaffold0337 (44-105)||(1774-1835)
[»] scaffold0211 (1 HSPs)
scaffold0211 (44-137)||(24074-24167)
[»] scaffold0008 (1 HSPs)
scaffold0008 (53-105)||(49336-49388)
[»] scaffold1367 (1 HSPs)
scaffold1367 (44-103)||(836-895)
[»] scaffold0238 (1 HSPs)
scaffold0238 (64-137)||(2673-2746)
[»] scaffold0002 (1 HSPs)
scaffold0002 (62-103)||(94967-95008)
[»] scaffold0291 (1 HSPs)
scaffold0291 (57-101)||(2468-2512)


Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 9842944 - 9842591
Alignment:
Q  1 atcactaaataaaactacaagttcagacccacttggaatggcctggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattct 100  Q
    |||||||||||||||| |||||||||||||| |||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  9842944 atcactaaataaaactgcaagttcagacccagttgggatggcctgatattgacttgggacttgggagtgtgctcctcctcgaggtctcgggttcaaatct 9842845  T
Q  101 ctccgatgataatttggataggctaatttaacttcttnnnnnnnnnnnnnnnn----ctgcaagttcaagattacctctaaggcaacttgtgcagaatcc 196  Q
    ||||||||||||||| |||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||    
T  9842844 ctccgatgataatttagataggctaatttaacttcttaaaaaaaataaaaataaaaactgcaagttcaagattacctctaaggcaacttgtgcagaatcc 9842745  T
Q  197 acttaagaataagataaaatgacacattggcaaaattttgagaatttctcaaattttattaaacatcaagtctgatctcatgagggcaaaacaaatataa 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9842744 acttaagaataagataaaatgacacattggcaaaattttgagaatttctcaaattttattaaacatcaagtctgatctcatgagggcaaaacaaatataa 9842645  T
Q  297 ataaacagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  9842644 ataaacagttgtgttatatggtgcaacaagcaccacatgaattgcacgagagaa 9842591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 23556011 - 23556062
Alignment:
Q  299 aaacagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23556011 aaacagttgtgctatatggtgcgacaagcaccacacgaattgcacgagagaa 23556062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 14495860 - 14495767
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||||||  ||||| ||| ||||| |||| ||||||    
T  14495860 tggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggctagtttagcttctt 14495767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 16773828 - 16773921
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| ||||| |||||||| ||||  ||||| | | |||||||||| ||||||    
T  16773828 tggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttctt 16773921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 19949650 - 19949578
Alignment:
Q  65 gagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||||||||||| |||| ||||||||| || ||| ||  ||||||||||| |||||||||||||||    
T  19949650 gagtgtgctcctcctcgagctctcaggttcaattttcaccggtgtcaatttggatagactaatttaacttctt 19949578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 27841052 - 27840981
Alignment:
Q  66 agtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||||||| |||| ||||| |||||||| | || |||||||||| |||||||||| ||||||    
T  27841052 agtgtgctcctcctcgagatctccggttcgattctctctggtgttaatttggatgggctaatttagcttctt 27840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 29075802 - 29075895
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||| |||||||||||||||||||||| ||||  |||| |||||||| | ||  ||||| ||| |||||||||| ||||||    
T  29075802 tggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatttagcttctt 29075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 1410714 - 1410670
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||| |||||||||||| |||||||||||||||||||||||||||    
T  1410714 tggtattgacttgggatatgggagtgtgctcctcctcgaggtctc 1410670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 29692431 - 29692355
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    ||||||| ||||||||||||||||||| | ||||| |||| ||||||||||||||  ||||||| | | ||||||||    
T  29692431 ttgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctccgatgccaatttgggtggactaattta 29692355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 43442235 - 43442303
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    ||||||||||||||||||| ||||||| ||||| |||||||| | ||  ||||||||| ||||||||||    
T  43442235 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaattta 43442303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 12883871 - 12883921
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    ||||||| |||||||||||||||||| ||||||||  ||||||||||||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttcaattctctcc 12883921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 43241737 - 43241647
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaactt 134  Q
    |||| |||||||||||| | ||||||||| | |||| |||||||| ||||||||||||| |||||  ||||| | | | ||||||||||||    
T  43241737 tggtattgacttgggatcttggagtgtgcccttccttgaggtctcaggttcaattctcttcgatgccaatttagctggactaatttaactt 43241647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 35982730 - 35982802
Alignment:
Q  65 gagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||  ||| ||||| ||||| ||||| ||||||| ||||||||||  ||||||||| ||||||    
T  35982730 gagtgtgctcctctacgatgtctcaggttcgattctatccgatgctaatttggatgcgctaatttagcttctt 35982802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 6844750 - 6844793
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtct 87  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||    
T  6844750 tggtattgacttggaatttgggagtgtgttcctcctcgaggtct 6844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 25627078 - 25627137
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| ||||| | |||||||||||||||||||| ||||||| ||||| ||||||||    
T  25627078 tggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 25627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 25979200 - 25979250
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||| |||||||||||| ||||||||| ||||||| ||||| ||||||||    
T  25979200 cttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctctc 25979250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 14285200 - 14285241
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||    
T  14285200 tgggagtgtgctcctcctcaaggtctcaggttcgattctctc 14285241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 22020908 - 22020831
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||||||| |||||||||||||||||| || ||||| | ||| |||||||||  || |||||| | | ||||||||||    
T  22020908 cttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaattta 22020831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 30883253 - 30883196
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||| |||||||  ||||||||||||||||||| |||||||  |||||||||||    
T  30883253 tggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctc 30883196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 84854 - 84902
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||||||| ||||||||||||||||||| |||||||  |||| ||||||    
T  84854 cttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 8278330 - 8278286
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||| ||| ||||||| ||||||||||||||||||||||| ||||    
T  8278330 tggtattggcttgggacttgggagtgtgctcctcctcgagatctc 8278286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 18169892 - 18169844
Alignment:
Q  39 tggcctggtgttgacttgggatttgggagtgtgctcctcctcgaggtct 87  Q
    ||||||||| |||||||||||| |||||||||| ||||| ||| |||||    
T  18169892 tggcctggtattgacttgggatctgggagtgtggtcctcttcgtggtct 18169844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 39327136 - 39327053
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||  ||||||||||||||||||| ||||||  | ||| ||||||||| ||  |||||||| | |||||||||| ||||||    
T  39327136 cttgggacatgggagtgtgctcctcctcaaggtcttagcttcgattctctccaatactaatttgg-tgggctaatttagcttctt 39327053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 20335877 - 20335793
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||  ||||||||| |||||||||||||||||    
T  20335877 cttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatgggctaatttaacttctt 20335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 25590632 - 25590725
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||||| ||| ||| || ||  ||||||  | |||||||||| ||||||    
T  25590632 tggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtgggctaatttagcttctt 25590725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 26526311 - 26526403
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||||||| ||||||| |||||||||||||||| |  |||||||||  |||||||||| ||  ||||||||| || ||||||||||||||    
T  26526311 tggtattgacttaggatttgagagtgtgctcctcctcaaaatctcgggtt-gattctctccggtgtcaatttggatgggttaatttaacttctt 26526403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 279992 - 279916
Alignment:
Q  61 ttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| ||  ||||||| | |||||||||| ||||||    
T  279992 ttgggagtgtactcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 15137580 - 15137660
Alignment:
Q  50 tgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||  |||||||| | ||  ||||||| | ||||||||||    
T  15137580 tgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaattta 15137660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 22760884 - 22760948
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatg 108  Q
    |||| |||||||||||  ||||||||||||||||||| ||||||| ||||| |||||| ||||||    
T  22760884 tggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatg 22760948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 350
Target Start/End: Complemental strand, 42434968 - 42434920
Alignment:
Q  302 cagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  42434968 cagttgtgctatatgatgcgacaagcaccgcacgaattgcacgagagaa 42434920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 41519319 - 41519260
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||| |||||  |||||||    
T  41519319 tggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctc 41519260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 9871332 - 9871282
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||||||||||||||||||||||||| ||||| | ||| ||||||||    
T  9871332 cttgggatttgggagtgtgctcctcctcgaagtctcagattcgattctctc 9871282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 18056830 - 18056744
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||| ||||||||||  || ||||||||||||||||  ||||||| ||||| |||||| ||| || |||||||| | ||||||||||    
T  18056830 tggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggtgggctaattta 18056744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 23301677 - 23301613
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    ||||||||||  ||||||||||   ||||||||||| ||||||||||||||||||| ||||||||    
T  23301677 acccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctc 23301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 45709754 - 45709700
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgat 107  Q
    |||||||| || |||||||||||||||||||||||| ||||| ||| ||||||||    
T  45709754 cttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgat 45709700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 2446329 - 2446390
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||| ||| ||||||| ||||||||||||||||||||||| ||||  |||| ||||||||||    
T  2446329 tggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccg 2446390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 3174955 - 3175008
Alignment:
Q  51 gacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||| |||||||||    
T  3174955 gacttgggatctgggagtgtgctccatctcgaggtctcaggttcgattctctcc 3175008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 24513818 - 24513911
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||| ||||||||||||| || ||||| |||||||| ||||| ||| || | ||||  ||||||| | |||||||||||||||||    
T  24513818 tggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggtgggctaatttaacttctt 24513911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 37085604 - 37085547
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||| |||||||||||||||||||||| |||||||||| || ||||| ||||||    
T  37085604 tggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 8108602 - 8108658
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattct 100  Q
    |||| |||||||||||| |||||||| ||||||||| |||||||| ||||| |||||    
T  8108602 tggtattgacttgggatatgggagtgcgctcctccttgaggtctcaggttcgattct 8108658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 37117200 - 37117148
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||| ||||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  37117200 cttgagatttgggagtgtactcctccttgaggtttcgggttcgattctctccg 37117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 2882991 - 2883030
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  2882991 ggagtgtgctcctcctcaaggtctcaggttcaattctctc 2883030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 26459465 - 26459406
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||  ||||||||||||||||||| ||||||| ||||| ||||||||    
T  26459465 tggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 26459406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 42262146 - 42262091
Alignment:
Q  48 gttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||||||| || |||||||||||||||  ||||||| | ||||||||||||    
T  42262146 gttgacttgggatctgagagtgtgctcctcctaaaggtctcagattcaattctctc 42262091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 7309396 - 7309438
Alignment:
Q  63 gggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    ||||||||||||||||||||||||||  |||| ||||||||||    
T  7309396 gggagtgtgctcctcctcgaggtctcaagttcgattctctccg 7309438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 17041058 - 17041008
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||| ||| ||||||||||||||| ||||||| ||||| ||||||||    
T  17041058 cttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 18363726 - 18363776
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||||||||||||||||||||||| ||||||| ||||  ||||||||    
T  18363726 cttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctc 18363776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 23552144 - 23552198
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||||||  ||||||||||||||||||| |||||||  |||| ||||||||    
T  23552144 ttgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctc 23552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 26703155 - 26703197
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttca 95  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||    
T  26703155 cttgggatctgggagtgtgctccttctcgaggtctcaggttca 26703197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 29385798 - 29385740
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctct 102  Q
    |||||||| ||||||| || ||||||||||||||||| ||||||| ||||  |||||||    
T  29385798 tggtgttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctct 29385740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 48771959 - 48772009
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttc 94  Q
    |||| ||| |||||||| |||||||||||||||||| |||||||| |||||    
T  48771959 tggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttc 48772009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 5668626 - 5668565
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||| ||| |||||||  ||| ||||||||||||||||||||||| || || ||||||||||    
T  5668626 tggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccg 5668565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 27776202 - 27776247
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaatt 98  Q
    ||||||| ||| |||||||||||||||||| ||||| |||||||||    
T  27776202 cttgggacttgagagtgtgctcctcctcgaagtctcaggttcaatt 27776247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 33362653 - 33362714
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||| |||||||| |||||| || |||||||||||||||||| |  |||||||||| |||||    
T  33362653 tggtattgacttgagatttgagaatgtgctcctcctcgaggtttgaggttcaattccctccg 33362714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 43590928 - 43590985
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||||| ||||| ||||||    
T  43590928 tggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 7801181 - 7801251
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttc 94  Q
    ||||||||||  ||||||||||   |||||||||||  |||||||||||||||| || ||||||| |||||    
T  7801181 acccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttc 7801251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 35513496 - 35513580
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| ||| ||||||||||||||||||  ||||  |||| ||| ||||||||| |||||| | | | |||||||| ||||||    
T  35513496 cttgggacttgagagtgtgctcctcctcgatatctcatgttcgattttctccgatggtaatttaggtggactaatttagcttctt 35513580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 41519156 - 41519072
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||  |||||||||||| ||| ||||||| | ||| ||| |||||| ||  ||||||| | |||||||||| ||||||    
T  41519156 cttgggatttaagagtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttgggtgggctaatttagcttctt 41519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 27917882 - 27917816
Alignment:
Q  234 ttgagaatttctcaaattttattaaacatcaagtctga-tctcatgagggcaaaacaaatataaata 299  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27917882 ttgagaatttctcaaattttattaaacatcaagtctgattctcatgacggcaaaacaaatataaata 27917816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 27921694 - 27921628
Alignment:
Q  234 ttgagaatttctcaaattttattaaacatcaagtctga-tctcatgagggcaaaacaaatataaata 299  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27921694 ttgagaatttctcaaattttattaaacatcaagtctgattctcatgacggcaaaacaaatataaata 27921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 27913261 - 27913327
Alignment:
Q  234 ttgagaatttctcaaattttattaaacatcaagtctga-tctcatgagggcaaaacaaatataaata 299  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  27913261 ttgagaatttctcaaattttattaaacatcaagtctgattcttatgacggcaaaacaaatataaata 27913327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 6385883 - 6385976
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||  ||||| ||||||||||||  ||||||| ||||| |||||||||| || |||||||| | |||||||||| ||||||    
T  6385883 tggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 3779360 - 3779453
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||| || |||||||||||||||| ||| ||||||| | |||||||| ||| ||||  ||||| |||||| ||||||||||||||    
T  3779360 tggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctctgatgtcaattttgataggataatttaacttctt 3779453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 33549125 - 33549218
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||| ||||| |||||||| ||||  ||||| | |  ||||||||| ||||||    
T  33549125 tggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 11423587 - 11423647
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    |||| |||||||||||||||||||| |||| |||||||||||||| ||||| ||| |||||    
T  11423587 tggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctcc 11423647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 12633035 - 12633090
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    ||||||||||||||||||||||||||||| ||||| ||||  |||| |||||||||    
T  12633035 ttgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctcc 12633090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 32050397 - 32050318
Alignment:
Q  58 gatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||| |||||||| ||||||| | | | ||||| |||||||  ||||||| ||||||||||||| |||||    
T  32050397 gatttgggagtgtgatcctcctcaaggtctcagatccgattctttccgatgtcaatttgggtaggctaatttaatttctt 32050318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 15951348 - 15951298
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||||||||||||||||||||||| |||||||  |||||||||||||    
T  15951348 cttgagatttgggagtgtgctcctcctcaaggtctcatgttcaattctctc 15951298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 12234562 - 12234469
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||  ||||||||||||||  ||||||||||| ||||| |||||||||  ||  ||||| ||| || ||||||| ||||||    
T  12234562 tggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatgggataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 24507591 - 24507530
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||||||| |||||||  | ||||| ||||||||||| |||||| |||||||||||||||||    
T  24507591 tggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccg 24507530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 24641245 - 24641204
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggt 85  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  24641245 tggtattgacttgggatctgggagtgtgctcctcctcgaggt 24641204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 31623046 - 31622953
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||| ||||  | || ||||| ||  ||||||| | |||||||||| ||||||    
T  31623046 tggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagcttctt 31622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 28363968 - 28364051
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| || |||||||||||||||| ||||||| | ||| ||| |||| | ||  ||||||||| ||||||||||| |||||    
T  28363968 ttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaatttaatttctt 28364051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 30127421 - 30127512
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttc 135  Q
    |||| ||| |||||| | |||||||||||||||| |||||||||| ||||| ||||| |||| ||  ||||| | |||| ||||||| ||||    
T  30127421 tggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagcttc 30127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 19162823 - 19162869
Alignment:
Q  63 gggagtgtgctcctcctcgaggtctcgggttcaattctctccgatga 109  Q
    ||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  19162823 gggagtgtgctcctcctcgagatctcaggttcgattctctcctatga 19162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 28841455 - 28841521
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    ||||||||||||||||| |||||||  |||| |||||||||| ||  ||||| ||| ||||||||||    
T  28841455 ggagtgtgctcctcctcaaggtctcaagttcgattctctccggtgtcaatttagattggctaattta 28841521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 24334080 - 24333987
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||| |||||||  | | ||| ||||||||||| ||||||| |||||||||||| ||| ||  ||||||| | ||||| |||| ||||||    
T  24334080 tggtgttggcttgggacattgcagtatgctcctcctcaaggtctcaggttcaattctcaccggtgccaatttgggtgggctagtttagcttctt 24333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 6758477 - 6758433
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  6758477 tggtattggcttaggatttgggagtgtgctccacctcgaggtctc 6758433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 8268659 - 8268695
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctc 80  Q
    |||||||| |||| |||||||||||||||||||||||    
T  8268659 tggtgttgccttgagatttgggagtgtgctcctcctc 8268695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 13661558 - 13661590
Alignment:
Q  61 ttgggagtgtgctcctcctcgaggtctcgggtt 93  Q
    |||||||||||||||||||||||||||| ||||    
T  13661558 ttgggagtgtgctcctcctcgaggtctcaggtt 13661590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 20863396 - 20863440
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||||||| ||||||| || ||||||||||||||||| |||||||    
T  20863396 tggtgttggcttgggactttggagtgtgctcctcctcaaggtctc 20863440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 11534 - 11625
Alignment:
Q  32 cttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggata 120  Q
    ||||| |||||||||||   ||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||| | || |||||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaatttggata 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 968383 - 968476
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||  ||||| | | |||||||||| ||||||    
T  968383 tggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 23361704 - 23361645
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  23361704 tggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctc 23361645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 11928764 - 11928693
Alignment:
Q  66 agtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||||||||||||||| ||||| |||||  ||||||  ||||||||| || ||||||||||||||    
T  11928764 agtgtgctcctcctcgaggtctcaggttcgattcttaccgatgtcaatttggatgggttaatttaacttctt 11928693  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 31087304 - 31087220
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| ||| |||||| ||  |||||  ||||||||||||||||||||    
T  31087304 cttgggatctgggagtatccccctcctcgaggtctcaggttcgattatctccggtgtcaatttaaataggctaatttaacttctt 31087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 35641947 - 35641896
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    |||| ||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  35641947 cttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctcc 35641896  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 2203513 - 2203599
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||| ||| |||||||  ||||||||||||||||||| ||||||| || ||||||||| ||| ||  ||||||| | ||||||||||    
T  2203513 tggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaattta 2203599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 22193419 - 22193357
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccga 106  Q
    |||||||||||||||   ||||||||||||||||||| ||||||  ||||| |||||||||||    
T  22193419 tggtgttgacttggggcctgggagtgtgctcctcctcaaggtcttaggttcgattctctccga 22193357  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 16852361 - 16852418
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||| ||||| ||||||    
T  16852361 tggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 29858124 - 29858049
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattc 99  Q
    ||||||||||| ||||||||||   ||| |||||||   |||||||||||||||||||||||||| ||||| ||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

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Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 11819806 - 11819890
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||||||||||||| ||||||| ||||| |||| |||   ||  ||||||| | |||||||||| ||||||    
T  11819806 cttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttctt 11819890  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 27750760 - 27750844
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||||||||||||| ||||||| ||||| |||| |||   ||  ||||||||| | |||||||| ||||||    
T  27750760 cttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggactaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 29018087 - 29018004
Alignment:
Q  50 tgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaactt 134  Q
    ||||||||||  ||||||| ||||||||||  |  |||| |||||||||||| |||||| ||||||||||  |||||||||||||    
T  29018087 tgacttgggacctgggagt-tgctcctccttaaaatctcaggttcaattctccccgatgttaatttggatgagctaatttaactt 29018004  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 29431041 - 29431125
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||| |||||||  | || |||||||  | |||||||||| ||||||    
T  29431041 cttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtgggctaatttagcttctt 29431125  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 1157102 - 1157173
Alignment:
Q  66 agtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||| || || |||||  |||||||||||||||||   |||||||||  ||||||||||||||||    
T  1157102 agtgtgctccttcttgatgtctcaagttcaattctctccgataccaatttggatgagctaatttaacttctt 1157173  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 6536561 - 6536600
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  6536561 ggagtgtgctcctcctcaaggtctcaggttcaattctctc 6536600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 30483939 - 30483880
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||| |||||||||||||||||||   ||||| ||||||||||||||    
T  30483939 tggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctc 30483880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 35583625 - 35583664
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  35583625 ttgacttgggacttgggagtttgctcctcctcgaggtctc 35583664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 3624601 - 3624662
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||| ||| |||||||  |||||||||||||||| || ||||||| ||||| ||||||||||    
T  3624601 tggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccg 3624662  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 24675555 - 24675474
Alignment:
Q  56 gggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||| || |||||||||||| ||| ||||||| | ||| ||| |||| |||| ||||||||||   |||||||||||||||    
T  24675555 gggatctgagagtgtgctccttctcaaggtctcagattcgattttctctgatgttaatttggatgaactaatttaacttctt 24675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 35287737 - 35287798
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||||||| |||| ||||| ||||||||||||||||| |||| ||  |||| ||||||||||    
T  35287737 tggtgttggcttgagattttggagtgtgctcctcctcaaggtatcatgttcgattctctccg 35287798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 3524454 - 3524394
Alignment:
Q  46 gtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccga 106  Q
    |||||| |||||||  | ||||||||||||||||| ||||||  |||||||||||| ||||    
T  3524454 gtgttggcttgggaccttggagtgtgctcctcctcaaggtcttaggttcaattctccccga 3524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 11492119 - 11492035
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| ||||||||||||||| ||||||||||  ||||| ||||||| |  ||  ||||||| | |||||||||| ||||||    
T  11492119 cttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 26688886 - 26688942
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattct 100  Q
    |||||||| |||||||  | ||||||||||||||||| ||||||| |||||| ||||    
T  26688886 tggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttct 26688942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 31088699 - 31088787
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||  || ||||||| |  ||||||||||||| ||||  |||||||| |||   ||||| | |||||||||||||||||||    
T  31088699 ttgacttgggacctgcgagtgtgattatcctcgaggtctcaggtttgattctctctgataccaatttaggtaggctaatttaacttctt 31088787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 33727911 - 33727835
Alignment:
Q  61 ttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||||||||||||||| ||||||| ||||| |||| |||   ||  ||||||||| |||||||||| ||||||    
T  33727911 ttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 44780160 - 44780120
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggtt 93  Q
    ||||||| |||||||||||||||||||| ||||||| ||||    
T  44780160 cttgggacttgggagtgtgctcctcctcaaggtctcaggtt 44780120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 4844566 - 4844473
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| || || |||||||||| ||  ||||||  | |||||||||| ||||||    
T  4844566 tggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttctt 4844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 4870262 - 4870169
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| || || |||||||||| ||  ||||||  | |||||||||| ||||||    
T  4870262 tggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttctt 4870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 10499184 - 10499071
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggc 123  Q
    ||||||||||  ||||||||||   ||| |||||||| ||||||| ||||| |||| |||||||| ||||| |||||||||||||  ||||||| | |||    
T  10499184 acccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggc 10499085  T
Q  124 taatttaacttctt 137  Q
    ||||||| ||||||    
T  10499084 taatttagcttctt 10499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 38550459 - 38550366
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||||||| || |||||||||||||||||||| |||||||  ||||||||||||| |  || ||||||||||  ||||||||| ||||||    
T  38550459 tggtattgacttagggtttgggagtgtgctcctccttgaggtctgaggttcaattctcttctgtgttaatttggatgagctaatttagcttctt 38550366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 51903933 - 51903840
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||| |||||||||||||||||||| |||||| ||||| |||||||||| ||  ||||||  | |||||||||| ||||||    
T  51903933 tggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttctt 51903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 10445185 - 10445101
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||  ||||||||||||||||||||||||||| ||||| |||||||| | || |||||||  | |||||||||| ||||||    
T  10445185 cttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttctt 10445101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 13808935 - 13808847
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||||  |||  ||||||||| |  ||||||| ||||||    
T  13808935 ttgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatggattaatttagcttctt 13808847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 44743901 - 44743817
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||  ||  ||||||| | || ||||||| ||||||    
T  44743901 cttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttctt 44743817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 14339611 - 14339688
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    ||||| ||||| ||||||||||   ||| |||||||||||||||||||||||||||| | ||||| ||||| ||||||    
T  14339611 acccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 19716238 - 19716309
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttc 135  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||| ||| ||||||| | |||||||||| ||||    
T  19716238 ggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 36720402 - 36720461
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||| |||||||||||||||||||||||| || ||||| ||||||||    
T  36720402 tggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctc 36720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 30715770 - 30715855
Alignment:
Q  51 gacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||| |||||||||||||||||||| | || || ||||| |||||||||| ||  ||||||||| ||||| |||| ||||||    
T  30715770 gacttgggacttgggagtgtgctcctcctcaatgtttcaggttcgattctctccg-tgccaatttggatgggctagtttagcttctt 30715855  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 31520680 - 31520600
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    ||||||||||  ||||||||||   ||| |||||||| ||||||||||||||||||||||||||  ||||  |||||||||    
T  31520680 acccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctcc 31520600  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 28531104 - 28531027
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||||||| ||||||| ||||||||||||||||||  || ||||||||||| | ||  ||||||| | ||||||||||    
T  28531104 cttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaattta 28531027  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 30311336 - 30311385
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctct 102  Q
    |||||||| ||||||||||||||||||| ||||||| ||||| |||||||    
T  30311336 cttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 39253725 - 39253782
Alignment:
Q  51 gacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatg 108  Q
    |||||||||| |||||||||||||||| || ||||||| ||||| |||||||| ||||    
T  39253725 gacttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatg 39253782  T

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Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 53412984 - 53413025
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  53412984 tgggagtgtgctcctcctcaaggtctcaggttcaattctctc 53413025  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 47810782 - 47810707
Alignment:
Q  61 ttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||||||| | ||||||||||||  |||||||||| ||  ||||||| | |||| ||||||||||||    
T  47810782 ttgggagtgtgctcctccgcaaggtctcgggtttgattctctccggtgccaatttgggtgggct-atttaacttctt 47810707  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 49452911 - 49452986
Alignment:
Q  61 ttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||||||||| ||||||| ||||||| || |||   ||  ||||||||| |||||||||||||||||    
T  49452911 ttgggagtgtgctcctcctcaaggtctcaggttcaa-tccctctagtgtcaatttggatgggctaatttaacttctt 49452986  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 2667883 - 2667942
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||| ||||||||||||| ||||||||||||| ||||| ||| ||||    
T  2667883 tggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctc 2667942  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 16213024 - 16212934
Alignment:
Q  47 tgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||| |||| || |||||||||||||||||||  |||||||  ||||||||| ||||| |   ||||||||| | |||||||| ||||||    
T  16213024 tgttgccttgagacttgggagtgtgctcctccttaaggtctcaagttcaattcactccggtatcaatttggatggactaatttagcttctt 16212934  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 28703450 - 28703400
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||| |||||||||||||||| || ||||||| ||||| ||||||||    
T  28703450 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 28703400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 31608594 - 31608535
Alignment:
Q  27 acccacttggaatggcctggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    ||||||||||| |||||| ||  || |||| ||| |||||||||||||||||||||||||||    
T  31608594 acccacttggattggcctagt--tggcttgagatctgggagtgtgctcctcctcgaggtctc 31608535  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 52770026 - 52769980
Alignment:
Q  56 gggatttgggagtgtgctcctcctcgaggtctcgggttcaattctct 102  Q
    ||||| |||||||||||||||||| |||||||| ||||| |||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctct 52769980  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 14186688 - 14186729
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||    
T  14186688 ggagtgtgctcctcctcaaggtctcaggttcgattctctccg 14186729  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 47454652 - 47454615
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  47454652 ggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 49494201 - 49494152
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggtt 93  Q
    |||| ||||||||  |||||||||||||||| ||||||||||||| ||||    
T  49494201 tggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtt 49494152  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 8075173 - 8075089
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||||||||||||| |||| || ||||| |||| |||   ||  ||||||| | |||||||||| ||||||    
T  8075173 cttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 8075089  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 8501623 - 8501571
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||||||| ||| ||||||||||||||||||| | || || ||||||||||||    
T  8501623 ttgacttgagatctgggagtgtgctcctcctcaaagtttcaggttcaattctc 8501571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 31789016 - 31788984
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggt 85  Q
    |||||||| ||||||||||||||||||||||||    
T  31789016 cttgggatctgggagtgtgctcctcctcgaggt 31788984  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 33899653 - 33899693
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctct 102  Q
    ||||||||||||||||||| ||||||| ||||| |||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctct 33899693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 46518649 - 46518713
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatg 108  Q
    |||| ||| |||||||| ||||||||||||||||||| |||| || ||||  |||||||| ||||    
T  46518649 tggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatg 46518713  T

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Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 28846712 - 28846805
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||  ||||||||||||||||||||| ||||| ||||| ||| || ||||||  ||||||| ||| |||||||||||||||    
T  28846712 tggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgattatcaccgatgtcaatttgggtagactaatttaacttctt 28846805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 25637182 - 25637265
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| ||||||||||||||| ||||||||||| |||||  ||||||||||||  ||||| | | |||||||||||||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttctt 25637265  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 12086184 - 12086091
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  ||| ||||||||||||||| ||||||||||||| |||| ||||| || |||||| | | |||||||||| ||||||    
T  12086184 tggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 39715013 - 39715070
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| ||||| ||||||    
T  39715013 tggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 30907676 - 30907590
Alignment:
Q  51 gacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||| |||||||||||||||||||||| |||||  |||||||| ||||  |||  ||||||  | | |||||||||||||||    
T  30907676 gacttgggacttgggagtgtgctcctcctcgacgtctcatgttcaattttctcttatgccaatttgtgttgactaatttaacttctt 30907590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 42327450 - 42327364
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||| ||| |||||||  ||||||||||||||||||| ||||||| ||||| ||||||| || ||  ||||||| | ||||||||||    
T  42327450 tggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaattta 42327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 23230660 - 23230567
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||| ||||||  ||||||||||||||||||| | ||  | |||||||||||||||  ||  |||||||||  ||||||||||||||||    
T  23230660 tggtattgatttgggaactgggagtgtgctcctcctcaaagttccaggttcaattctctccagtgtcaatttggatgagctaatttaacttctt 23230567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 33839297 - 33839240
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggat 119  Q
    ||||||||||||||||||| ||||||| ||||||||||| || | || ||||||||||    
T  33839297 tgggagtgtgctcctcctcaaggtctcaggttcaattctttctggtgctaatttggat 33839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 7799090 - 7799030
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    |||| ||| ||||||| ||||||||||||||||||||||| |||| | ||| |||||||||    
T  7799090 tggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctcc 7799030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 21195714 - 21195638
Alignment:
Q  61 ttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||   ||  ||||||||| |||||||||| ||||||    
T  21195714 ttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 16951429 - 16951492
Alignment:
Q  74 cctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||| ||||| ||||||| | ||| |||||| ||| |||||||||||||||||    
T  16951429 cctcatcgaggtctcaggttcgattctcttcaatgctaatttagatgggctaatttaacttctt 16951492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 17022094 - 17022157
Alignment:
Q  74 cctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||| ||||| ||||||| | ||| |||||| ||| |||||||||||||||||    
T  17022094 cctcatcgaggtctcaggttcgattctcttcaatgctaatttagatgggctaatttaacttctt 17022157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 37480076 - 37480189
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggc 123  Q
    ||||||||||  ||||||||||   ||| |||||||  || |||||||||||||||| ||||||| ||||| |||||| ||| |   ||||||| | |||    
T  37480076 acccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggc 37480175  T
Q  124 taatttaacttctt 137  Q
    ||||||| ||||||    
T  37480176 taatttagcttctt 37480189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 38551804 - 38551875
Alignment:
Q  59 atttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||||||||||||||| | ||  |||||| | |||| ||||||||||||| |||||| ||| ||||||||||    
T  38551804 atttgggagtgtgctctttcttaaggtcttgtgttcgattctctccgatgttaatttagattggctaattta 38551875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 41202271 - 41202358
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaa 131  Q
    |||| ||||| || ||| ||||||| ||||||||||||| ||||  ||||||||| |||| ||||  ||||||||| | |||||||||    
T  41202271 tggtattgacctgagatctgggagtatgctcctcctcgaagtcttaggttcaattttctctgatgtcaatttggatggactaatttaa 41202358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 29197431 - 29197341
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaactt 134  Q
    |||| ||||||||||| ||||||||||||||||||| || |||||  |||| |||||  ||| ||  ||||| | | ||||||||||||||    
T  29197431 tggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtgggctaatttaactt 29197341  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 360777 - 360712
Alignment:
Q  65 gagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||||||||||||||| | ||||| ||||||||||||| || || |||||||| | || |||||||    
T  360777 gagtgtgctcctcctctacgtctcaggttcaattctcttcggtgttaatttgggtgggttaattta 360712  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 19016052 - 19016145
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||| || ||||||||||||||||||||||||||||  |||  |||||| ||| ||  |||||   |||||||||||| ||||||    
T  19016052 tggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatttagcttctt 19016145  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 23052578 - 23052521
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||| ||||||| ||||||||||||| |||||| ||||||| ||||| ||||||    
T  23052578 tggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 42602575 - 42602668
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  ||||||||||||||| ||| ||||||  ||||  |||||||||| ||  ||||||| | |||||||||| ||||||    
T  42602575 tggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagcttctt 42602668  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 4262348 - 4262296
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||||||  ||| ||||||||||||||| ||||||| ||||| ||||||||||    
T  4262348 cttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctccg 4262296  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 18259751 - 18259811
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    |||| ||| |||| |||||| |||||||||||||||  ||||||| ||||||| |||||||    
T  18259751 tggtattggcttgagatttgagagtgtgctcctcctataggtctcaggttcaactctctcc 18259811  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 19244129 - 19244189
Alignment:
Q  43 ctggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||| |||||||||||  || |||||||||||||| | ||||||| ||||| ||||||||    
T  19244129 ctggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctc 19244189  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 31573675 - 31573603
Alignment:
Q  65 gagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||||||| || ||||| ||||| ||||||| |||||  ||||| | | | |||||||||||||||    
T  31573675 gagtgtgctcctccttgatgtctcaggttcgattctcttcgatgtcaatttaggtggactaatttaacttctt 31573603  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 32650645 - 32650593
Alignment:
Q  50 tgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctct 102  Q
    ||||||| ||| ||||||||| ||||| ||| ||||||||||||| |||||||    
T  32650645 tgacttgagatctgggagtgtactcctgctcaaggtctcgggttcgattctct 32650593  T

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Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 19238652 - 19238546
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggc 123  Q
    ||||||||||  ||||||||||   ||| ||||||| |||||||||||||||||||||||||||||||||| |||||| ||| |   ||||||| | |||    
T  19238652 acccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggc 19238553  T
Q  124 taattta 130  Q
    |||||||    
T  19238552 taattta 19238546  T

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Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 51948506 - 51948594
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||| | ||||||||| ||||||||||||||| |||||||||||||||  ||  |||||  || | |||||||||||||||    
T  51948506 ttgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaatttaaatggactaatttaacttctt 51948594  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 51954140 - 51954228
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||  ||| |||||| ||  ||||||| | |||||||||| ||||||    
T  51954140 ttgacttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttctt 51954228  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 350
Target Start/End: Complemental strand, 54079167 - 54079119
Alignment:
Q  302 cagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  54079167 cagttgtgctatatggtgcgacaagcaccacacgaattacacgagagaa 54079119  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 28635723 - 28635810
Alignment:
Q  50 tgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||| |||||||||||||||||| |||||||  ||||| |||||||| | ||  ||||||| | |||||||||| ||||||    
T  28635723 tgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttctt 28635810  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 47044718 - 47044795
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    ||||||||||| ||||||||||   |||||||||||| || |||| ||||||||||||||||||| ||||| ||||||    
T  47044718 acccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 51969052 - 51969131
Alignment:
Q  58 gatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||||||||||||||| |||| || |||||| ||||||| | ||  ||||||||| | |||||||||||||||    
T  51969052 gatttgggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttggatggactaatttaacttctt 51969131  T

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Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 49576949 - 49576856
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| ||| ||| |||||||||||||||||||| ||||||| ||||| ||||||||| |||  ||||||| | | |||| ||||||||||    
T  49576949 tggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggactaacttaacttctt 49576856  T

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Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 39509100 - 39509148
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  39509100 cttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

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Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 32046710 - 32046664
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattc 99  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  32046710 cttgggatttgggagagtgctcctcttcgaggtctcgggttcgattc 32046664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 13015448 - 13015507
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| ||||||| |||||||||||||||||||||| |||||  |||| ||||||||    
T  13015448 tggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctc 13015507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 30938264 - 30938217
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    ||||||| | ||||||||||||||||||||||||| ||||| ||||||    
T  30938264 ttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 37109406 - 37109347
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||  ||||||||||||||||||| ||||||| ||||| ||||||||    
T  37109406 tggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 37109347  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 38869789 - 38869844
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattc 99  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||| ||||| ||||    
T  38869789 tggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 38869844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 46295120 - 46295211
Alignment:
Q  46 gtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||| |||||||  | ||||||||||||||||| ||||||| ||||| |||||| ||| ||  ||||||| | ||||| |||| ||||||    
T  46295120 gtgttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 51250597 - 51250484
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggc 123  Q
    ||||||||||  ||||||||||   ||| |||||||| |||||||||||||| |||| || ||||  |||| |||| ||||| ||  ||||||| | |||    
T  51250597 acccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggc 51250498  T
Q  124 taatttaacttctt 137  Q
    ||||||| ||||||    
T  51250497 taatttagcttctt 51250484  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 4249207 - 4249257
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||||| ||||||||||||||||| ||||||| ||||  ||||||||    
T  4249207 cttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctc 4249257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 23377986 - 23378036
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||  ||||||||||||||||||| ||||||| ||||| ||||||||    
T  23377986 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 23378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 24827846 - 24827896
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttc 94  Q
    |||| |||||||||||  |||||||| |||||||||||||||||| |||||    
T  24827846 tggtattgacttgggacctgggagtgcgctcctcctcgaggtctcaggttc 24827896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 7949489 - 7949416
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||||||||| ||||||| ||||| |||||||| | ||  ||||| | | |||||||||| ||||||    
T  7949489 ggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttctt 7949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 13496262 - 13496355
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||||||||  || ||||||| ||||| ||||||||||| |||| ||||| || | | | |||||||||  ||||||||| ||||||    
T  13496262 tggtattgacttgggacatgtgagtgtgttcctcttcgaggtctcgtgttcgattctttctggtaacaatttggatgagctaatttagcttctt 13496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 14451796 - 14451747
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaatt 98  Q
    |||||||||||| || |||||||||||||||| ||||||  |||||||||    
T  14451796 ttgacttgggatatgagagtgtgctcctcctcaaggtcttaggttcaatt 14451747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 8030250 - 8030166
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||||||||||||| |||||||  |||| |||| |||   ||  ||||||| | |||||||||| ||||||    
T  8030250 cttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 8030166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 8931134 - 8931046
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| |||||| ||| |||||||||||||||  |||||||  |||| |||  | |||||| |||||||| | || ||||||||||||||    
T  8931134 ttgatttgggacttgagagtgtgctcctcctgaaggtctcaagttcgatttcccccgatgctaatttgggtcggttaatttaacttctt 8931046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 12821994 - 12822082
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||| |||||||||||||||  || ||||||| | ||| |||  |||||||  |||||| | |||| ||||||| ||||||    
T  12821994 ttgacttgggatctgggagtgtgctcctgttcaaggtctcagattcgatttcctccgattctaatttaggtaggttaatttagcttctt 12822082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 21660199 - 21660155
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||    
T  21660199 tggtattgacttgagatctgggagtgtgctcttcctcgaggtctc 21660155  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 21668963 - 21668919
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||    
T  21668963 tggtattgacttgagatctgggagtgtgctcttcctcgaggtctc 21668919  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 31759713 - 31759669
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||| ||| ||||||| |||||||||||||||||||| |||||||    
T  31759713 tggtattggcttgggacttgggagtgtgctcctcctcaaggtctc 31759669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 37274505 - 37274421
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||  ||||||||||||||||||| ||||||  ||||| |||||||| | || ||||||   | |||||||||| ||||||    
T  37274505 cttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttctt 37274421  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 43728416 - 43728472
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattct 100  Q
    |||| |||||||  ||| ||||||||||||||||||| | ||||| |||||||||||    
T  43728416 tggtattgacttatgatctgggagtgtgctcctcctcaaagtctcaggttcaattct 43728472  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 52254459 - 52254399
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    |||| |||||||||||| || ||||||||||||||| ||||| || ||||  |||||||||    
T  52254459 tggtattgacttgggatatgagagtgtgctcctccttgaggtttcaggttagattctctcc 52254399  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 55427275 - 55427169
Alignment:
Q  27 acccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggc 123  Q
    ||||||||||  ||||||||||   ||| |||||||  ||||||| ||||||| ||||||||||| ||||| ||||||  || ||  ||||||| | |||    
T  55427275 acccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtgggc 55427176  T
Q  124 taattta 130  Q
    |||||||    
T  55427175 taattta 55427169  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 41703375 - 41703425
Alignment:
Q  300 aacagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41703375 aacagttgtgctatatggtgcgacaagcaccacacgaattacacgagagaa 41703425  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 41697782 - 41697831
Alignment:
Q  301 acagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41697782 acagttgtgctatatggtgcgacaagcaccacacgaattacacgagagaa 41697831  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 12587296 - 12587352
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||    
T  12587296 ttgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccg 12587352  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 51814515 - 51814601
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||| |||||||| ||| || |||||||||||||||| ||||||| ||||| |||||||||| ||  ||||||| | ||||||||||    
T  51814515 tggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaattta 51814601  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 12259289 - 12259354
Alignment:
Q  52 acttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttgg 117  Q
    ||||||||||||||||||||||||||||||| |||||  |||| |||||| ||||||  |||||||    
T  12259289 acttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctcaccgatgtcaatttgg 12259354  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 16893415 - 16893508
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||| ||  ||||||  | |||||||||| ||||||    
T  16893415 tggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttctt 16893508  T

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Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 8017225 - 8017273
Alignment:
Q  302 cagttgtgctatatggtgcaacaagcaccacacgaattgcacgagagaa 350  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  8017225 cagttgtgcaatatggtgcgacgagcaccacacgaattgcacgagagaa 8017273  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 40257438 - 40257513
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||||||||||||||||||  |||||||||| |||| ||  ||||||| | ||||| |||| ||||||    
T  40257438 tgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggctagtttagcttctt 40257513  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 3265950 - 3266004
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||| | |||||||||||||||||||| ||||||| ||||| ||||||||    
T  3265950 ttgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 3266004  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 15786366 - 15786317
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctct 102  Q
    |||||||| ||||||||||||||||||| ||||||| ||||| |||||||    
T  15786366 cttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 21547535 - 21547442
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  |||||| ||||||||||||||||| || ||||| |||||||| ||||  ||||| | | ||||| |||||||||||    
T  21547535 tggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggctagtttaacttctt 21547442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 31794319 - 31794226
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| ||||||| |||||||||||||||||||| |||||| | |||| |||| ||| | ||  ||||||| | |||||||||| ||||||    
T  31794319 tggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtgggctaatttagcttctt 31794226  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 45266856 - 45266941
Alignment:
Q  45 ggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    ||||||||||||||  || ||||| ||||||||||| ||||||| ||||| |||||| ||| ||  ||||||||| ||||| ||||    
T  45266856 ggtgttgacttggggctttggagtttgctcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgggctagttta 45266941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 52116836 - 52116779
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  52116836 tggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctc 52116779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 52336829 - 52336736
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||| ||||||||||||||||||  || |||| ||||| ||| |||| | ||  ||||||||| ||||||||||| |||||    
T  52336829 tggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaatttaatttctt 52336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 4280501 - 4280413
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||||||| ||| ||||||||| |||||  ||||||| ||||  ||||||| || || |||||||| |  ||||||||||||||||    
T  4280501 ttgacttgggacttgagagtgtgcttctcctgaaggtctcaggtttgattctcttcggtgctaatttgggtgagctaatttaacttctt 4280413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 6122824 - 6122908
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||||||||||||| ||||||| ||||| |||| |||   ||  ||||||| | |||||||||| ||||||    
T  6122824 cttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 6122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 6948114 - 6948039
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||||||| ||||||||||||||  ||||||||||| ||| ||  ||||| |||  | ||||||||||||||    
T  6948114 tgggagtgtgctgctcctcgaggtctcatgttcaattctcaccggtgtcaatttagatgagttaatttaacttctt 6948039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 8177237 - 8177178
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||| ||||||||||||||||||| |||| || ||||| ||||||||    
T  8177237 tggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 8177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 9165250 - 9165191
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||  ||||||||||||||||||| | ||||| ||||||||||||||    
T  9165250 tggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctc 9165191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 17410262 - 17410345
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| |||||||||| ||||||||||| ||||  |||| ||||||    |||  ||||| |||||||||||||||||||||    
T  17410262 ttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctcctttatgccaatttagataggctaatttaacttctt 17410345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 26232395 - 26232356
Alignment:
Q  65 gagtgtgctcctcctcgaggtctcgggttcaattctctcc 104  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  26232395 gagtgtgctcctccttgaggtctcaggttcaattctctcc 26232356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 28411351 - 28411410
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| |||||||||||| || ||||||||||||| | |||||||| | ||||||||||||    
T  28411351 tggtattgacttgggatatgagagtgtgctcctctttgaggtctcagattcaattctctc 28411410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 30203260 - 30203189
Alignment:
Q  66 agtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||  ||||| |   |||||||||| ||||||    
T  30203260 agtgttctcctcctcaaggtctcaggttcaattctctccgatgccaattttggctggctaatttagcttctt 30203189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 33700828 - 33700769
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| ||||| || ||||||||||||||||||| ||||||| ||||| ||||||||    
T  33700828 tggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 33700769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 2799892 - 2799942
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| ||||||||||||||||||| ||||||| ||||| ||||||||    
T  2799892 cttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 2799942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 8904440 - 8904494
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||||||||| || |||||||||||||||| |||||||  |||| ||||||||    
T  8904440 ttgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctc 8904494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 17439944 - 17439982
Alignment:
Q  50 tgacttgggatttgggagtgtgctcctcctcgaggtctc 88  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  17439944 tgacttaggatctgggagtgtgctcctcctcgaggtctc 17439982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 21268039 - 21267989
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||| |||||||||||||||||||| |||||| |||||  ||||||||    
T  21268039 cttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctctc 21267989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 1094546 - 1094639
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||||||||| |  || |||||||||||||| |||||||||   ||| |||||||||| ||  ||||| | | |||||||||||||||||    
T  1094546 tggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttctt 1094639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 9643864 - 9643771
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||| |||||||||| || ||||| ||||||| | ||||||| |||||| ||  |||||   |||| ||||||||||||||    
T  9643864 tggtattggcttgggatctgggagtgtgttcatcctcaaggtctcagattcaattatctccggtgtcaatttttgtaggttaatttaacttctt 9643771  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 9964464 - 9964545
Alignment:
Q  49 ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||||||||||| ||||||||||||| ||||| | ||||| ||||  ||| |||||  || |||||| ||| ||||||||||    
T  9964464 ttgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtgctaattttgatgggctaattta 9964545  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 10150914 - 10150865
Alignment:
Q  54 ttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||||| |||||||||| ||||||||| | ||||| ||||||||||||||    
T  10150914 ttgggacttgggagtgtactcctcctcaaagtctcaggttcaattctctc 10150865  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 24047157 - 24047064
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||| || ||||||||||||||||||||||||| ||  |||| |||||| ||  ||  ||||| | | |||||||||||||||||    
T  24047157 tggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaatttaacttctt 24047064  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 25494124 - 25494031
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||| | ||||| |||| ||||||||||||||| ||||  ||||| |   ||| ||||| ||| |||||||||||||||||    
T  25494124 tggtattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttagatgggctaatttaacttctt 25494031  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 29738239 - 29738312
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||||| ||| ||||| || ||||  |||| ||||||||||||| |||||||||| || ||||||| ||||||    
T  29738239 ggagtgtactcatcctcaagatctcaagttcgattctctccgatgctaatttggatgggttaatttagcttctt 29738312  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 2220015 - 2220079
Alignment:
Q  66 agtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||||||| |||||||||||||| ||||| ||||||||| |||  |||||  || ||||||||||    
T  2220015 agtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaatttaaatgggctaattta 2220079  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 9117149 - 9117233
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||||||| ||| |||||||||||||| |||||||| ||||| ||||| |||  |  ||||||||    ||||||||||||||||    
T  9117149 cttgggatctggaagtgtgctcctccttgaggtctcaggttcgattctttccagtactaatttgggcgtgctaatttaacttctt 9117233  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 12370193 - 12370245
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||||||  |||||||||||||||||||||||||||  |||  ||||||||||    
T  12370193 cttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctccg 12370245  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 44126395 - 44126509
Alignment:
Q  26 gacccacttggaatggcctggtg---ttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggatagg 122  Q
    |||||||||||  ||||||||||   ||||| |||||  ||||||||||||||||| ||||||||| | ||  ||||||||   ||  ||||| | ||||    
T  44126395 gacccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtagg 44126494  T
Q  123 ctaatttaacttctt 137  Q
    |||||||| ||||||    
T  44126495 ctaatttagcttctt 44126509  T

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Target: scaffold0258 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 15378 - 15285
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||| ||||| |||||||| ||||  ||||| | | |||||||||| ||||||    
T  15378 tggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttctt 15285  T

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Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 41688 - 41602
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaattta 130  Q
    |||| ||| |||| ||| || |||| ||||||||||||||||||| |||||||||||||| ||||  ||||||| | ||||||||||    
T  41688 tggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgggctaattta 41602  T

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Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 13101 - 13028
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttgg 117  Q
    |||| ||| |||| ||| ||||||||||||||||||| ||||||| ||||| |||||||||||||  |||||||    
T  13101 tggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgg 13028  T

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Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 1774 - 1835
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    |||||||| |||||||  | ||||| ||||||||||| |||||| |||||||||||||||||    
T  1774 tggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccg 1835  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 24074 - 24167
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    |||| ||||||||||| || |||||||||||||| |||| || || ||||| ||| |||| ||||  ||||||  | |||||||||||||||||    
T  24074 tggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtgggctaatttaacttctt 24167  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 49336 - 49388
Alignment:
Q  53 cttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctccg 105  Q
    ||||||||||| ||||||||||||| ||||||| || ||||| ||||||||||    
T  49336 cttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccg 49388  T

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Target: scaffold1367 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 895 - 836
Alignment:
Q  44 tggtgttgacttgggatttgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    |||| ||| |||||||| ||||| ||||||||||||||| ||||| ||||| ||||||||    
T  895 tggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 2746 - 2673
Alignment:
Q  64 ggagtgtgctcctcctcgaggtctcgggttcaattctctccgatgataatttggataggctaatttaacttctt 137  Q
    ||||| ||||||||||| ||||||| ||||| |||||||| | ||  |||||| | ||||||||||| ||||||    
T  2746 ggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagaggctaatttagcttctt 2673  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 95008 - 94967
Alignment:
Q  62 tgggagtgtgctcctcctcgaggtctcgggttcaattctctc 103  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||    
T  95008 tgggagtgtgctcctcctcaaggtctcaggttcaattatctc 94967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 2512 - 2468
Alignment:
Q  57 ggatttgggagtgtgctcctcctcgaggtctcgggttcaattctc 101  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  2512 ggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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