View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0193_low_18 (Length: 309)

Name: NF0193_low_18
Description: NF0193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0193_low_18
NF0193_low_18
[»] scaffold0238 (3 HSPs)
scaffold0238 (120-235)||(24526-24647)
scaffold0238 (120-153)||(24669-24702)
scaffold0238 (199-235)||(24471-24507)
[»] chr7 (58 HSPs)
chr7 (120-235)||(48306076-48306197)
chr7 (120-235)||(15974060-15974181)
chr7 (120-235)||(48691773-48691894)
chr7 (120-235)||(46572774-46572895)
chr7 (128-178)||(30430548-30430598)
chr7 (128-178)||(43742303-43742353)
chr7 (131-178)||(32090039-32090086)
chr7 (131-178)||(39007220-39007267)
chr7 (132-178)||(5728734-5728780)
chr7 (128-178)||(6846719-6846769)
chr7 (128-178)||(24360552-24360602)
chr7 (128-178)||(26945654-26945704)
chr7 (128-174)||(41065909-41065955)
chr7 (128-178)||(44426652-44426702)
chr7 (131-178)||(32090082-32090129)
chr7 (131-178)||(48830210-48830257)
chr7 (128-178)||(27334924-27334974)
chr7 (132-178)||(31192500-31192546)
chr7 (128-178)||(31365325-31365375)
chr7 (128-178)||(32091318-32091368)
chr7 (128-178)||(48830386-48830436)
chr7 (135-178)||(25779503-25779546)
chr7 (131-174)||(27334970-27335013)
chr7 (131-178)||(44140501-44140548)
chr7 (131-178)||(46346147-46346194)
chr7 (128-178)||(7843659-7843709)
chr7 (128-178)||(10569746-10569796)
chr7 (128-178)||(32604850-32604900)
chr7 (128-178)||(38837669-38837719)
chr7 (128-178)||(39007174-39007224)
chr7 (128-178)||(45478368-45478418)
chr7 (128-178)||(46024824-46024874)
chr7 (131-178)||(34876234-34876281)
chr7 (128-174)||(5758088-5758134)
chr7 (128-178)||(6620673-6620723)
chr7 (128-178)||(42773740-42773790)
chr7 (132-178)||(46346105-46346151)
chr7 (120-153)||(48691727-48691760)
chr7 (135-178)||(32090000-32090043)
chr7 (131-178)||(34876191-34876238)
chr7 (139-178)||(34876277-34876316)
chr7 (200-235)||(48691904-48691939)
chr7 (132-178)||(10566145-10566191)
chr7 (132-178)||(33798508-33798554)
chr7 (132-178)||(34227820-34227866)
chr7 (128-178)||(44140455-44140505)
chr7 (120-153)||(15974191-15974224)
chr7 (120-153)||(46572899-46572932)
chr7 (120-153)||(48306036-48306069)
chr7 (150-178)||(6846625-6846653)
chr7 (150-178)||(24360419-24360447)
chr7 (150-178)||(25779370-25779398)
chr7 (150-178)||(32604767-32604795)
chr7 (150-178)||(38837586-38837614)
chr7 (150-178)||(41065814-41065842)
chr7 (150-178)||(44426769-44426797)
chr7 (150-178)||(46004387-46004415)
chr7 (150-178)||(48830253-48830281)
[»] scaffold0338 (3 HSPs)
scaffold0338 (120-235)||(6247-6368)
scaffold0338 (200-235)||(6378-6413)
scaffold0338 (120-153)||(6204-6237)
[»] chr8 (73 HSPs)
chr8 (120-232)||(1209524-1209642)
chr8 (120-235)||(4835864-4835985)
chr8 (120-235)||(4841309-4841430)
chr8 (120-227)||(7058916-7059029)
chr8 (126-235)||(4835723-4835842)
chr8 (126-235)||(4841168-4841287)
chr8 (128-178)||(17656672-17656722)
chr8 (185-235)||(2750844-2750894)
chr8 (128-178)||(10586001-10586051)
chr8 (128-178)||(23397230-23397280)
chr8 (128-178)||(27506846-27506896)
chr8 (128-178)||(40022595-40022645)
chr8 (128-178)||(40246592-40246642)
chr8 (133-178)||(1672184-1672229)
chr8 (128-176)||(35448290-35448338)
chr8 (131-178)||(185935-185982)
chr8 (131-178)||(13526224-13526271)
chr8 (131-178)||(13615759-13615806)
chr8 (128-178)||(1773229-1773279)
chr8 (185-235)||(2750932-2750982)
chr8 (185-235)||(2751020-2751070)
chr8 (128-178)||(6783487-6783537)
chr8 (128-178)||(9853043-9853093)
chr8 (128-178)||(17792832-17792882)
chr8 (128-178)||(18161343-18161393)
chr8 (128-178)||(23504633-23504683)
chr8 (128-178)||(34343303-34343353)
chr8 (128-178)||(35301836-35301886)
chr8 (128-177)||(23940754-23940803)
chr8 (131-178)||(9852846-9852893)
chr8 (131-178)||(18026936-18026983)
chr8 (128-178)||(2523557-2523607)
chr8 (128-178)||(2541130-2541179)
chr8 (128-178)||(12356138-12356188)
chr8 (132-178)||(13526182-13526228)
chr8 (132-178)||(13615717-13615763)
chr8 (132-178)||(32644191-32644237)
chr8 (128-178)||(34647378-34647428)
chr8 (132-174)||(39022768-39022810)
chr8 (128-173)||(8439128-8439173)
chr8 (120-160)||(2751058-2751098)
chr8 (132-171)||(5106679-5106718)
chr8 (128-183)||(15260078-15260133)
chr8 (131-178)||(23397058-23397105)
chr8 (131-178)||(30652409-30652455)
chr8 (131-178)||(34647557-34647604)
chr8 (131-178)||(40022774-40022821)
chr8 (135-178)||(42434363-42434406)
chr8 (132-178)||(24473189-24473235)
chr8 (131-177)||(30652368-30652413)
chr8 (120-153)||(1209478-1209511)
chr8 (120-160)||(2750882-2750922)
chr8 (120-160)||(2750970-2751010)
chr8 (131-163)||(15809709-15809741)
chr8 (128-159)||(1672804-1672835)
chr8 (200-235)||(4835672-4835707)
chr8 (200-235)||(4841117-4841152)
chr8 (131-178)||(12356095-12356142)
chr8 (135-178)||(28698089-28698132)
chr8 (132-178)||(28979405-28979449)
chr8 (128-178)||(7614606-7614656)
chr8 (120-153)||(4835995-4836028)
chr8 (120-153)||(4841440-4841473)
chr8 (120-153)||(7058884-7058917)
chr8 (120-153)||(8551134-8551167)
chr8 (150-178)||(2541045-2541073)
chr8 (150-178)||(9852889-9852917)
chr8 (150-178)||(17656788-17656816)
chr8 (138-178)||(30652451-30652491)
chr8 (150-178)||(34647533-34647561)
chr8 (150-178)||(35301991-35302019)
chr8 (150-178)||(39022631-39022659)
chr8 (150-178)||(40022750-40022778)
[»] chr5 (41 HSPs)
chr5 (127-235)||(28069437-28069551)
chr5 (120-235)||(2826224-2826345)
chr5 (120-235)||(34329914-34330035)
chr5 (128-178)||(23155696-23155746)
chr5 (128-178)||(23334930-23334980)
chr5 (128-178)||(11376521-11376571)
chr5 (128-178)||(15059487-15059537)
chr5 (128-178)||(22671850-22671900)
chr5 (131-178)||(8949475-8949522)
chr5 (132-178)||(11660926-11660972)
chr5 (128-178)||(33857483-33857533)
chr5 (128-178)||(39086571-39086621)
chr5 (128-178)||(42746573-42746623)
chr5 (133-178)||(35915889-35915934)
chr5 (131-178)||(16668226-16668273)
chr5 (131-178)||(33868757-33868804)
chr5 (128-178)||(7286807-7286857)
chr5 (128-178)||(13363568-13363618)
chr5 (128-178)||(20134339-20134389)
chr5 (132-178)||(23155579-23155625)
chr5 (128-178)||(36864121-36864171)
chr5 (128-178)||(39166280-39166330)
chr5 (132-178)||(39861724-39861770)
chr5 (128-178)||(42746693-42746743)
chr5 (131-178)||(4675543-4675588)
chr5 (131-178)||(703861-703908)
chr5 (131-178)||(4675500-4675547)
chr5 (139-178)||(25016468-25016507)
chr5 (128-178)||(22830642-22830692)
chr5 (120-153)||(2826355-2826388)
chr5 (132-174)||(16668051-16668093)
chr5 (132-178)||(18464584-18464630)
chr5 (128-178)||(20696267-20696317)
chr5 (128-178)||(25191850-25191900)
chr5 (120-153)||(28069573-28069606)
chr5 (150-178)||(8949518-8949546)
chr5 (150-178)||(16552293-16552321)
chr5 (150-178)||(16668202-16668230)
chr5 (150-178)||(18464735-18464763)
chr5 (150-178)||(22830758-22830786)
chr5 (150-178)||(42512650-42512678)
[»] chr6 (41 HSPs)
chr6 (120-235)||(24736770-24736891)
chr6 (120-235)||(877975-878096)
chr6 (120-235)||(878118-878239)
chr6 (120-235)||(33345530-33345651)
chr6 (131-178)||(16967558-16967605)
chr6 (128-178)||(7765191-7765241)
chr6 (132-178)||(18611951-18611997)
chr6 (128-178)||(22857617-22857667)
chr6 (131-178)||(10588896-10588943)
chr6 (128-178)||(10698717-10698768)
chr6 (131-178)||(15008248-15008295)
chr6 (131-178)||(29157781-29157828)
chr6 (128-178)||(19281424-19281474)
chr6 (128-178)||(25119410-25119460)
chr6 (128-178)||(30387140-30387190)
chr6 (133-178)||(15008074-15008119)
chr6 (131-178)||(4102620-4102667)
chr6 (131-178)||(4338215-4338262)
chr6 (131-178)||(22031737-22031784)
chr6 (131-178)||(30909201-30909248)
chr6 (128-178)||(4338126-4338176)
chr6 (128-178)||(7371038-7371088)
chr6 (140-178)||(18611775-18611813)
chr6 (132-178)||(21384933-21384979)
chr6 (128-178)||(26713114-26713164)
chr6 (128-178)||(27079726-27079776)
chr6 (131-178)||(4338172-4338219)
chr6 (131-178)||(28129369-28129416)
chr6 (128-178)||(11140396-11140446)
chr6 (132-178)||(29163316-29163362)
chr6 (133-178)||(4102445-4102490)
chr6 (137-178)||(30909377-30909418)
chr6 (132-163)||(4102664-4102695)
chr6 (132-178)||(14237923-14237969)
chr6 (201-235)||(18612184-18612218)
chr6 (128-178)||(20522788-20522838)
chr6 (202-235)||(33345487-33345520)
chr6 (120-153)||(33345661-33345694)
chr6 (150-178)||(18611818-18611846)
chr6 (199-235)||(24736712-24736748)
chr6 (150-178)||(25119152-25119180)
[»] chr2 (59 HSPs)
chr2 (120-235)||(18297375-18297496)
chr2 (120-235)||(4578889-4579009)
chr2 (120-235)||(25193583-25193704)
chr2 (120-235)||(25193714-25193835)
chr2 (124-235)||(14550626-14550743)
chr2 (120-235)||(2264377-2264498)
chr2 (120-223)||(2264258-2264367)
chr2 (120-235)||(4578759-4578879)
chr2 (120-235)||(4579019-4579137)
chr2 (128-178)||(19246716-19246766)
chr2 (128-178)||(31711564-31711614)
chr2 (128-178)||(1095308-1095358)
chr2 (128-178)||(20661535-20661585)
chr2 (132-178)||(20710557-20710603)
chr2 (128-178)||(31783847-31783897)
chr2 (128-178)||(42364546-42364596)
chr2 (131-178)||(4281220-4281267)
chr2 (131-174)||(39548441-39548484)
chr2 (128-178)||(16111567-16111617)
chr2 (128-178)||(30777466-30777516)
chr2 (128-178)||(36636150-36636200)
chr2 (132-178)||(37867208-37867254)
chr2 (128-178)||(41345294-41345344)
chr2 (128-178)||(43823470-43823520)
chr2 (131-171)||(13081317-13081357)
chr2 (138-178)||(34726746-34726786)
chr2 (131-178)||(3928218-3928265)
chr2 (131-178)||(28056012-28056059)
chr2 (131-178)||(44341888-44341935)
chr2 (132-178)||(3147230-3147276)
chr2 (132-178)||(4281044-4281090)
chr2 (132-178)||(12449187-12449233)
chr2 (128-178)||(22588458-22588508)
chr2 (128-178)||(35126633-35126683)
chr2 (132-178)||(41345474-41345520)
chr2 (132-178)||(44915435-44915481)
chr2 (135-178)||(13081278-13081321)
chr2 (131-178)||(28049155-28049202)
chr2 (131-178)||(36636329-36636376)
chr2 (135-178)||(39548480-39548523)
chr2 (131-178)||(43823293-43823340)
chr2 (132-178)||(20193971-20194017)
chr2 (128-178)||(22596444-22596494)
chr2 (132-178)||(24183541-24183587)
chr2 (120-153)||(2264203-2264236)
chr2 (199-235)||(4578713-4578749)
chr2 (200-235)||(2264508-2264543)
chr2 (200-235)||(4280870-4280905)
chr2 (131-174)||(16141414-16141457)
chr2 (200-235)||(25995910-25995945)
chr2 (200-235)||(43823705-43823740)
chr2 (132-178)||(20570818-20570864)
chr2 (120-153)||(4579159-4579192)
chr2 (133-178)||(16141459-16141504)
chr2 (131-172)||(21156529-21156570)
chr2 (120-153)||(25193528-25193561)
chr2 (121-153)||(14550766-14550798)
chr2 (138-178)||(16141378-16141418)
chr2 (150-178)||(20710424-20710452)
[»] chr1 (94 HSPs)
chr1 (120-235)||(23174602-23174723)
chr1 (120-235)||(180438-180559)
chr1 (124-235)||(23174737-23174854)
chr1 (120-235)||(180578-180699)
chr1 (120-235)||(11422303-11422424)
chr1 (120-178)||(23921137-23921195)
chr1 (128-178)||(21256047-21256097)
chr1 (131-178)||(28322610-28322657)
chr1 (128-178)||(11354451-11354501)
chr1 (128-178)||(18057583-18057633)
chr1 (128-178)||(18928832-18928882)
chr1 (128-178)||(23319235-23319285)
chr1 (128-178)||(31084189-31084239)
chr1 (128-178)||(32595158-32595208)
chr1 (128-178)||(33157045-33157095)
chr1 (132-178)||(37642904-37642950)
chr1 (128-178)||(45890391-45890441)
chr1 (128-178)||(47693806-47693856)
chr1 (131-178)||(2741519-2741566)
chr1 (131-178)||(30788790-30788837)
chr1 (131-178)||(31084012-31084059)
chr1 (131-178)||(35197599-35197646)
chr1 (128-178)||(1395218-1395268)
chr1 (128-178)||(12070550-12070600)
chr1 (128-178)||(14229301-14229351)
chr1 (128-178)||(17811137-17811187)
chr1 (128-178)||(18952526-18952576)
chr1 (128-178)||(19216611-19216661)
chr1 (128-178)||(20506516-20506566)
chr1 (128-178)||(28322564-28322614)
chr1 (128-178)||(29945271-29945321)
chr1 (128-178)||(31763829-31763879)
chr1 (128-178)||(35197420-35197470)
chr1 (128-178)||(44261132-44261182)
chr1 (128-176)||(30802979-30803027)
chr1 (131-178)||(16116479-16116526)
chr1 (131-178)||(19216568-19216615)
chr1 (131-178)||(23921323-23921370)
chr1 (131-178)||(31528998-31529045)
chr1 (131-178)||(33097822-33097869)
chr1 (131-178)||(51420868-51420915)
chr1 (131-178)||(51801051-51801098)
chr1 (135-181)||(2741559-2741605)
chr1 (185-235)||(4097235-4097285)
chr1 (136-178)||(9628547-9628589)
chr1 (128-178)||(14389898-14389948)
chr1 (128-178)||(16116655-16116705)
chr1 (128-178)||(17893213-17893263)
chr1 (128-178)||(35754623-35754673)
chr1 (128-178)||(44687778-44687828)
chr1 (132-178)||(45849253-45849299)
chr1 (131-178)||(19850661-19850708)
chr1 (135-178)||(31528959-31529002)
chr1 (131-178)||(44261089-44261136)
chr1 (131-178)||(44687867-44687914)
chr1 (131-178)||(51420911-51420958)
chr1 (135-178)||(51801012-51801055)
chr1 (132-178)||(6708371-6708417)
chr1 (132-178)||(9040995-9041041)
chr1 (132-178)||(10498040-10498086)
chr1 (128-178)||(12796483-12796533)
chr1 (132-178)||(32143712-32143758)
chr1 (132-178)||(51904826-51904872)
chr1 (120-153)||(180398-180431)
chr1 (120-153)||(8401607-8401640)
chr1 (120-153)||(34370346-34370379)
chr1 (131-178)||(10497866-10497911)
chr1 (199-234)||(180710-180745)
chr1 (200-235)||(8401562-8401597)
chr1 (131-178)||(16116436-16116483)
chr1 (131-174)||(20506694-20506737)
chr1 (131-174)||(23277352-23277395)
chr1 (200-235)||(23921092-23921127)
chr1 (200-235)||(34370392-34370427)
chr1 (200-235)||(35197202-35197237)
chr1 (131-178)||(44687824-44687871)
chr1 (128-178)||(24368469-24368519)
chr1 (128-178)||(30788833-30788883)
chr1 (128-178)||(46590699-46590749)
chr1 (124-153)||(11422248-11422277)
chr1 (120-153)||(23174876-23174909)
chr1 (131-172)||(37227258-37227299)
chr1 (150-178)||(10497907-10497935)
chr1 (150-178)||(14390014-14390042)
chr1 (150-178)||(16116522-16116550)
chr1 (150-178)||(17893118-17893146)
chr1 (150-178)||(21256201-21256229)
chr1 (150-178)||(23277328-23277356)
chr1 (150-178)||(23921299-23921327)
chr1 (150-178)||(24368586-24368614)
chr1 (150-178)||(31084055-31084083)
chr1 (150-178)||(35754738-35754766)
chr1 (150-178)||(37642772-37642800)
chr1 (150-178)||(45849154-45849182)
[»] chr3 (60 HSPs)
chr3 (120-235)||(19384581-19384701)
chr3 (121-235)||(52986694-52986814)
chr3 (120-235)||(52986824-52986945)
chr3 (120-235)||(31852905-31853026)
chr3 (120-235)||(50754784-50754905)
chr3 (120-235)||(50754915-50755036)
chr3 (120-235)||(51361713-51361834)
chr3 (120-235)||(7044568-7044687)
chr3 (131-178)||(23755885-23755932)
chr3 (128-178)||(8718901-8718951)
chr3 (128-178)||(9070788-9070838)
chr3 (128-178)||(16653550-16653600)
chr3 (128-178)||(19012445-19012495)
chr3 (128-178)||(27446153-27446203)
chr3 (128-178)||(47728957-47729007)
chr3 (128-178)||(47924306-47924356)
chr3 (128-178)||(51681419-51681469)
chr3 (128-177)||(12974131-12974180)
chr3 (134-178)||(53595444-53595488)
chr3 (131-178)||(28299512-28299559)
chr3 (128-178)||(23756061-23756111)
chr3 (128-178)||(41191616-41191666)
chr3 (133-178)||(16276904-16276949)
chr3 (131-178)||(23699877-23699924)
chr3 (131-178)||(23718332-23718379)
chr3 (131-178)||(23736788-23736835)
chr3 (131-178)||(28299555-28299602)
chr3 (131-178)||(39194554-39194601)
chr3 (131-178)||(41191796-41191843)
chr3 (128-178)||(8036929-8036979)
chr3 (132-178)||(28299470-28299516)
chr3 (132-178)||(34562610-34562656)
chr3 (132-178)||(36185849-36185895)
chr3 (132-178)||(49053370-49053416)
chr3 (131-171)||(53595494-53595534)
chr3 (131-174)||(34562787-34562830)
chr3 (128-178)||(9643038-9643088)
chr3 (128-178)||(14743597-14743647)
chr3 (128-178)||(38345334-38345384)
chr3 (128-178)||(51846214-51846264)
chr3 (120-153)||(50754741-50754774)
chr3 (120-153)||(51361840-51361873)
chr3 (120-153)||(52986955-52986988)
chr3 (200-235)||(7044511-7044546)
chr3 (200-235)||(19384536-19384571)
chr3 (200-235)||(50755046-50755081)
chr3 (200-235)||(51361668-51361703)
chr3 (135-178)||(53595530-53595573)
chr3 (132-178)||(8061557-8061603)
chr3 (132-178)||(30794903-30794949)
chr3 (200-234)||(52986636-52986670)
chr3 (120-153)||(7044697-7044730)
chr3 (145-178)||(9183781-9183814)
chr3 (131-172)||(11982808-11982849)
chr3 (120-153)||(31852850-31852883)
chr3 (150-178)||(19012532-19012560)
chr3 (150-178)||(23755928-23755956)
chr3 (150-178)||(34562763-34562791)
chr3 (150-178)||(35221594-35221622)
chr3 (150-178)||(36185772-36185800)
[»] chr4 (83 HSPs)
chr4 (120-235)||(38245646-38245767)
chr4 (120-235)||(10473241-10473361)
chr4 (120-235)||(10473371-10473492)
chr4 (120-235)||(45256611-45256732)
chr4 (120-235)||(638717-638838)
chr4 (120-178)||(50644490-50644548)
chr4 (128-178)||(12722878-12722928)
chr4 (128-178)||(17109859-17109909)
chr4 (128-178)||(21995724-21995774)
chr4 (128-178)||(54895458-54895508)
chr4 (120-213)||(26577456-26577554)
chr4 (128-178)||(6385733-6385783)
chr4 (128-178)||(8157229-8157279)
chr4 (128-178)||(9553068-9553118)
chr4 (128-178)||(25573595-25573645)
chr4 (128-178)||(27765053-27765103)
chr4 (128-178)||(31763048-31763098)
chr4 (132-178)||(36924295-36924341)
chr4 (128-178)||(50562891-50562941)
chr4 (131-178)||(6385779-6385826)
chr4 (131-178)||(29826090-29826137)
chr4 (128-178)||(2124485-2124535)
chr4 (128-178)||(8166018-8166068)
chr4 (128-178)||(10374097-10374147)
chr4 (132-178)||(16474964-16475010)
chr4 (128-178)||(18924051-18924101)
chr4 (128-178)||(21097906-21097956)
chr4 (132-174)||(30358628-30358670)
chr4 (128-178)||(37059855-37059905)
chr4 (128-178)||(43374501-43374551)
chr4 (133-178)||(22180430-22180475)
chr4 (133-178)||(49137340-49137385)
chr4 (131-175)||(25573641-25573685)
chr4 (131-178)||(1729007-1729054)
chr4 (128-171)||(4169200-4169243)
chr4 (135-178)||(29825918-29825961)
chr4 (131-178)||(38010504-38010551)
chr4 (132-178)||(1492726-1492772)
chr4 (128-178)||(6841960-6842010)
chr4 (128-178)||(8165902-8165952)
chr4 (132-178)||(36309470-36309516)
chr4 (132-178)||(48077317-48077363)
chr4 (133-178)||(43852156-43852201)
chr4 (134-178)||(25573687-25573731)
chr4 (131-175)||(49137513-49137557)
chr4 (135-174)||(16299386-16299425)
chr4 (131-178)||(33883426-33883473)
chr4 (132-178)||(6768457-6768503)
chr4 (197-235)||(9551769-9551807)
chr4 (132-178)||(9967814-9967860)
chr4 (128-178)||(20862336-20862386)
chr4 (132-178)||(24687037-24687083)
chr4 (128-178)||(27872939-27872989)
chr4 (132-178)||(36621182-36621228)
chr4 (132-178)||(47567950-47567996)
chr4 (132-178)||(52325158-52325203)
chr4 (133-178)||(16299339-16299384)
chr4 (120-153)||(51836520-51836553)
chr4 (200-235)||(638848-638883)
chr4 (200-235)||(10473502-10473537)
chr4 (131-178)||(50644313-50644360)
chr4 (200-235)||(51836475-51836510)
chr4 (147-177)||(9552196-9552226)
chr4 (132-178)||(24687080-24687126)
chr4 (140-178)||(30358413-30358451)
chr4 (128-178)||(30779646-30779696)
chr4 (132-178)||(42788619-42788665)
chr4 (128-178)||(53526305-53526355)
chr4 (128-178)||(53865118-53865168)
chr4 (128-165)||(562889-562926)
chr4 (120-153)||(638674-638707)
chr4 (120-153)||(10473192-10473225)
chr4 (120-153)||(26577589-26577622)
chr4 (120-153)||(38245591-38245624)
chr4 (150-178)||(4169060-4169088)
chr4 (150-178)||(12722784-12722812)
chr4 (150-178)||(21097774-21097802)
chr4 (150-178)||(22180580-22180608)
chr4 (150-178)||(27764922-27764950)
chr4 (150-178)||(29826066-29826094)
chr4 (150-178)||(38010547-38010575)
chr4 (150-178)||(50644356-50644384)
chr4 (150-178)||(53865213-53865241)
[»] scaffold0194 (1 HSPs)
scaffold0194 (128-178)||(28439-28489)
[»] scaffold0097 (2 HSPs)
scaffold0097 (132-178)||(14396-14442)
scaffold0097 (150-178)||(14263-14291)
[»] scaffold0249 (1 HSPs)
scaffold0249 (128-178)||(23673-23723)
[»] scaffold0019 (1 HSPs)
scaffold0019 (128-178)||(72567-72617)
[»] scaffold0009 (2 HSPs)
scaffold0009 (128-178)||(203132-203182)
scaffold0009 (150-178)||(203288-203316)
[»] scaffold0004 (1 HSPs)
scaffold0004 (128-178)||(96053-96103)
[»] scaffold0291 (1 HSPs)
scaffold0291 (128-178)||(9650-9700)
[»] scaffold0126 (1 HSPs)
scaffold0126 (128-178)||(37687-37737)
[»] scaffold0129 (1 HSPs)
scaffold0129 (132-177)||(20064-20109)
[»] scaffold0455 (1 HSPs)
scaffold0455 (131-178)||(7956-8003)
[»] scaffold0102 (1 HSPs)
scaffold0102 (128-178)||(33670-33720)
[»] scaffold0534 (1 HSPs)
scaffold0534 (130-178)||(9962-10010)
[»] scaffold0036 (2 HSPs)
scaffold0036 (132-178)||(108654-108700)
scaffold0036 (131-172)||(108571-108612)
[»] scaffold0031 (1 HSPs)
scaffold0031 (128-174)||(80807-80853)
[»] scaffold0023 (1 HSPs)
scaffold0023 (131-172)||(120310-120351)
[»] scaffold0664 (1 HSPs)
scaffold0664 (150-178)||(3124-3152)
[»] scaffold0516 (1 HSPs)
scaffold0516 (150-178)||(1218-1246)


Alignment Details
Target: scaffold0238 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 24526 - 24647
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  24526 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctc 24625  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  24626 atcatcaacaccgtcgttcatc 24647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 24669 - 24702
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  24669 gtaccggaatgccaaaaccattttgctgtggaaa 24702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 24471 - 24507
Alignment:
Q  199 agaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  24471 agaatcttcaatctcatcatcaacgccgtcgttcatc 24507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 48306197 - 48306076
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  48306197 gtaccggaatgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 48306098  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||||||    
T  48306097 attatcaacaccgtcgttcatc 48306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 15974060 - 15974181
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       | |||||||||||||||||||||||||||||    
T  15974060 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaatccattttgctgtggaaatggtttccagaatcttcaatctc 15974159  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  15974160 atcatcaacaccgtcgttcatc 15974181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 48691894 - 48691773
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacc------cgtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  48691894 gtaccggaatgtcaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaacctattttgctatggaaatggtttccagaatcttcaatctc 48691795  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  48691794 atcatcaacaccgtcgttcatc 48691773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 46572774 - 46572895
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  46572774 gtaccggaatgccaaaaccattttgttgtggaaatggtttctatgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 46572873  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || ||||||| |||||||||||    
T  46572874 atcatcaacatcgtcgttcatc 46572895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 30430598 - 30430548
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30430598 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 30430548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 43742353 - 43742303
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43742353 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 43742303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 32090039 - 32090086
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32090039 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 32090086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 39007220 - 39007267
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39007220 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 39007267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 5728780 - 5728734
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5728780 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 5728734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 6846719 - 6846769
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6846719 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 6846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 24360602 - 24360552
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24360602 atgccaaaaccattttgatgtggaaatggtttctgtgagttgtactccaaa 24360552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 26945654 - 26945704
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26945654 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 26945704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 41065909 - 41065955
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41065909 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 41065955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 44426702 - 44426652
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44426702 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 44426652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 32090082 - 32090129
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32090082 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 32090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 48830257 - 48830210
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  48830257 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27334924 - 27334974
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  27334924 atgccaaaatcattttgctgtggaaatggtttctgtgagttggactccaaa 27334974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 31192500 - 31192546
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  31192500 caaaaccattttgctgtggaaatggtttctgtgaattgtactccaaa 31192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31365375 - 31365325
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  31365375 atgccaaaaccattttgctgtggaaatggtttatgtgacttgtactccaaa 31365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 32091368 - 32091318
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  32091368 atgccaaaaacattttgctgtggaaatagtttctgtgagttgtactccaaa 32091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 48830436 - 48830386
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48830436 atgccaaaaccattttgatgtggaaatagtttctgtgagttgtactccaaa 48830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 25779546 - 25779503
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25779546 aaccattttgctgtggaaatggtttctatgagttgtactccaaa 25779503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 27334970 - 27335013
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  27334970 ccaaaaccattttgctgtggaaatggtttctgtgaattgtactc 27335013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 44140501 - 44140548
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44140501 ccaaaaccattttgctgtggaaatagtttttgtgagttgtactccaaa 44140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 46346147 - 46346194
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  46346147 ccaaaactattttgctgtgaaaatggtttctgtgagttgtactccaaa 46346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 7843659 - 7843709
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  7843659 atgccaaaaccattttgctgtgaaaataatttctgtgagttgtactccaaa 7843709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 10569796 - 10569746
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  10569796 atgccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 10569746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 32604850 - 32604900
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  32604850 atgccaaaaccattttgctttggaaatggtttctgtgaattatactccaaa 32604900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 38837669 - 38837719
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  38837669 atgccaaaaccattttgctttggaaatggtttctgtgaattatactccaaa 38837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 39007174 - 39007224
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  39007174 atgccaaaaccattttgcaatggaaatggtttatgtgagttgtactccaaa 39007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 45478418 - 45478368
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  45478418 atgccaaaactattttgctgtgaaaatggtttctgtgagttgtacttcaaa 45478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 46024874 - 46024824
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  46024874 atgccaaaatcattttgctgtggaaatgatttttgtgagttgtactccaaa 46024824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 34876281 - 34876234
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  34876281 ccaaaaccatttttcaatggaaatggtttctgtgagttgtactccaaa 34876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 5758134 - 5758088
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||    
T  5758134 atgccaaaatcattttgctgtggaaatggtttcagggagttgtactc 5758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 6620723 - 6620673
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  6620723 atgcaaaaatcattttgctgtggaaatggtttctgtgtgttgtaccccaaa 6620673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 42773740 - 42773790
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||||||  |||||||||| ||||||    
T  42773740 atgccaaaaccattgtgctgtggaaatggttttggtgagttgtaatccaaa 42773790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 46346105 - 46346151
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||    
T  46346105 caaaaccattttgcagtggaaatggtttctgtgggttggactccaaa 46346151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 48691760 - 48691727
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  48691760 gtaccggaatgccaaaaccattttgctgtggaaa 48691727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 32090000 - 32090043
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||    
T  32090000 aaccattttgcagtggaaatgatttctgtgagttggactccaaa 32090043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 34876238 - 34876191
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| || || ||||||||| ||||||||||||||||||    
T  34876238 ccaaaaccatttttctatgaaaatggtttatgtgagttgtactccaaa 34876191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 34876316 - 34876277
Alignment:
Q  139 attttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  34876316 attttgcagtggaaatggtttctgtgagttggactccaaa 34876277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 48691939 - 48691904
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  48691939 gaatcttcaatctcatcatcaacaccgtcgttcatc 48691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 10566145 - 10566191
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| ||||||||||||| |||  |||||||||||||||||    
T  10566145 caaaaccattgtgctgtggaaatgattttggtgagttgtactccaaa 10566191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 33798554 - 33798508
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  33798554 caaaatcattttgctgtggaaatgatttatgtgagttgtattccaaa 33798508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 34227820 - 34227866
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||| |||| ||||||||| ||||||||||||||||||    
T  34227820 caaaatcattttgttgtgaaaatggtttgtgtgagttgtactccaaa 34227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 44140455 - 44140505
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| | |||| || ||||||||    
T  44140455 atgccaaaatcattttgctgtggaaatggtttatatgagctggactccaaa 44140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 15974191 - 15974224
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||||||||||||||||||||||||| |||||||    
T  15974191 gtaccggaatgccaaaaccattttgccgtggaaa 15974224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 46572899 - 46572932
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||| |||||||||||||||||||||||||||||    
T  46572899 gtactggaatgccaaaaccattttgctgtggaaa 46572932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 48306069 - 48306036
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||| ||||||||||||||||||||||||||||    
T  48306069 gtaccagaatgccaaaaccattttgctgtggaaa 48306036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 6846625 - 6846653
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  6846625 gaaatggtttctgtgagttgtactccaaa 6846653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 24360447 - 24360419
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  24360447 gaaatggtttctgtgagttgtactccaaa 24360419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 25779398 - 25779370
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  25779398 gaaatggtttctgtgagttgtactccaaa 25779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 32604767 - 32604795
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  32604767 gaaatggtttctgtgagttgtactccaaa 32604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 38837586 - 38837614
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  38837586 gaaatggtttctgtgagttgtactccaaa 38837614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 41065814 - 41065842
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  41065814 gaaatggtttctgtgagttgtactccaaa 41065842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 44426797 - 44426769
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  44426797 gaaatggtttctgtgagttgtactccaaa 44426769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 46004387 - 46004415
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  46004387 gaaatggtttctgtgagttgtactccaaa 46004415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 48830281 - 48830253
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  48830281 gaaatggtttctgtgagttgtactccaaa 48830253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 6368 - 6247
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||    
T  6368 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatttc 6269  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  6268 atcatcaacaccgtcgttcatc 6247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 6413 - 6378
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  6413 gaatcttcaatctcatcatcaacaccgtcgttcatc 6378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 6237 - 6204
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  6237 gtaccggaatgccaaaaccattttgttgtggaaa 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 1209642 - 1209524
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  1209642 gtaccggaatgccaaaaccattttgctgtggaaatgatttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctc 1209543  T
Q  214 attatcaacaccgtcgttc 232  Q
    || ||||||||||||||||    
T  1209542 atcatcaacaccgtcgttc 1209524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 4835864 - 4835985
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |       | ||||||||||||||| |||||||||||||    
T  4835864 gtaccggaatgccaaaaccatttttctgtggaaatggtttctatgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctc 4835963  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  4835964 atcatcaacaccgtcgttcatc 4835985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 4841309 - 4841430
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |       | ||||||||||||||| |||||||||||||    
T  4841309 gtaccggaatgccaaaaccatttttctgtggaaatggtttctatgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctc 4841408  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  4841409 atcatcaacaccgtcgttcatc 4841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 7059029 - 7058916
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||| |||||    
T  7059029 gtaccggaatgtcaaaaccattttgctatggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttctatctc 7058930  T
Q  214 attatcaacaccgt 227  Q
    || |||| ||||||    
T  7058929 atcatcatcaccgt 7058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 4835723 - 4835842
Alignment:
Q  126 gaatgccaaaaccattttgctgtggaaatggtttctg----tgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 215  Q
    |||||||||||||||||| ||||||||||||||| ||    ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4835723 gaatgccaaaaccatttttctgtggaaatggtttatgcatgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4835822  T
Q  216 tatcaacaccgtcgttcatc 235  Q
     |||||||||||||||||||    
T  4835823 catcaacaccgtcgttcatc 4835842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 4841168 - 4841287
Alignment:
Q  126 gaatgccaaaaccattttgctgtggaaatggtttctg----tgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 215  Q
    |||||||||||||||||| ||||||||||||||| ||    ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4841168 gaatgccaaaaccatttttctgtggaaatggtttatgcatgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4841267  T
Q  216 tatcaacaccgtcgttcatc 235  Q
     |||||||||||||||||||    
T  4841268 catcaacaccgtcgttcatc 4841287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 17656722 - 17656672
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17656722 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 17656672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 2750894 - 2750844
Alignment:
Q  185 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2750894 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtcgttcatc 2750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 10586001 - 10586051
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10586001 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 10586051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 23397280 - 23397230
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23397280 atgccaaaaccattttgatgtggaaatggtttctgtgagttgtactccaaa 23397230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27506846 - 27506896
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27506846 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 27506896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 40022595 - 40022645
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40022595 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 40022645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 40246592 - 40246642
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40246592 atgccaaaaccattttgcagtggaaatggtttctgtgagttgtactccaaa 40246642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 1672229 - 1672184
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1672229 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 1672184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 35448338 - 35448290
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactcca 176  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35448338 atgccaaaaccattttgctgtggaaatgatttctgtgagttgtactcca 35448290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 185982 - 185935
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  185982 ccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 185935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 13526224 - 13526271
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13526224 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 13526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 13615759 - 13615806
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13615759 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 13615806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 1773229 - 1773279
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  1773229 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 1773279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 2750982 - 2750932
Alignment:
Q  185 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2750982 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtagttcatc 2750932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 2751070 - 2751020
Alignment:
Q  185 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2751070 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtagttcatc 2751020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 6783537 - 6783487
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  6783537 atgccaaaaccattttgctgtgaaaatagtttctgtgagttgtactccaaa 6783487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 9853093 - 9853043
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  9853093 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 9853043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 17792832 - 17792882
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  17792832 atgccaaaaccattttgctgtgtaaatgatttctgtgagttgtactccaaa 17792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 18161393 - 18161343
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  18161393 atgccaaaaccattttactgtggaaatggtttctgtgatttgtactccaaa 18161343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 23504633 - 23504683
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23504633 atgccaaaaccattttgctgtgaaaatggattctgtgagttgtactccaaa 23504683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 34343353 - 34343303
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  34343353 atgccaaaaccattttgctgtggaaatggtttttgtgagttgtacttcaaa 34343303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 35301836 - 35301886
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  35301836 atgctaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 35301886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 23940754 - 23940803
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 177  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23940754 atgccaaaaccattttgctgtgaaaatggtttctatgagttgtactccaa 23940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 9852893 - 9852846
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  9852893 ccaaaatcattttgctgtggaaatggtttctgtgtgttgtactccaaa 9852846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 18026983 - 18026936
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18026983 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 18026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 2523607 - 2523557
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  2523607 atgccaaaaccattttggagtggaaatggtttatgtgagttgtactccaaa 2523557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 2541130 - 2541179
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  2541130 atgccaaaaccattttactgtggaaa-ggtttctgtgagttgtactccaaa 2541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 12356188 - 12356138
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  12356188 atgccaaaaccattttgcagtgaaaatggtttctgtgagttggactccaaa 12356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 13526182 - 13526228
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13526182 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 13526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 13615717 - 13615763
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13615717 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 13615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 32644191 - 32644237
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  32644191 caaaactattttgctgtggaaatgatttctgtgagttgtactccaaa 32644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 34647378 - 34647428
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  34647378 atgccaaaatcattttgctgtggaaatggtttatgtaagttgtactccaaa 34647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 39022810 - 39022768
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  39022810 caaaactattttgctgtggaaatggtttctgtgagttgtactc 39022768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 8439128 - 8439173
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtact 173  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  8439128 atgccaaaaccattttgctgtggaaatgatttatgtgagttgtact 8439173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 2751098 - 2751058
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttc 160  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2751098 gtaccggaatgctaaaaccattttgctgtggaaatggtttc 2751058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 5106679 - 5106718
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgta 171  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  5106679 caaaaccattttgctgtggaaatggtttttgtgagttgta 5106718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 15260078 - 15260133
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt 183  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  15260078 atgctaaaaccattttgctgtgaaaatggtttatgtgagttgtaatccaaaaccgt 15260133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 23397105 - 23397058
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||    
T  23397105 ccaaaaccattttgctgtgaaaatggtttctatgtgttgtactccaaa 23397058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 30652455 - 30652409
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  30652455 ccaaaaccattttgc-gtggaaatggtttctgtgtgttgtactccaaa 30652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 34647557 - 34647604
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||    
T  34647557 ccaaaaccattttgctgtggaaatggtttctgtgtattatactccaaa 34647604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 40022774 - 40022821
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  40022774 ccaaaaccattttgctgtggaaatgatttctgtgtgttgtacttcaaa 40022821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 42434406 - 42434363
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  42434406 aaccattttgttgtggaaatggtttatgtgagttgtactccaaa 42434363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 24473189 - 24473235
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||    
T  24473189 caaaaccattttgatgtggaaatggttgttgtgagttgtactccaaa 24473235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 30652413 - 30652368
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 177  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30652413 ccaaaaccattttgatgtggaaatggtttctgtgag-tgtactccaa 30652368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 1209511 - 1209478
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  1209511 gtaccggaatgccaaaaccattttgctgtggaaa 1209478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 2750922 - 2750882
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttc 160  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  2750922 gtaccggaatgaaaaaaccattttgctgtggaaatggtttc 2750882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 2751010 - 2750970
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttc 160  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  2751010 gtaccggaatgaaaaaaccattttgctgtggaaatggtttc 2750970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 15809741 - 15809709
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgt 163  Q
    |||||||||||||||||||||||||||||||||    
T  15809741 ccaaaaccattttgctgtggaaatggtttctgt 15809709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 1672835 - 1672804
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggttt 159  Q
    ||||||||||||||||||||||||||||||||    
T  1672835 atgccaaaaccattttgctgtggaaatggttt 1672804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 4835672 - 4835707
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  4835672 gaatcttcaatctcatcatcaacaccgtcgttcatc 4835707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 4841117 - 4841152
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  4841117 gaatcttcaatctcatcatcaacaccgtcgttcatc 4841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 12356142 - 12356095
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||| ||||||||| ||||||||||||  ||||||||    
T  12356142 ccaaaaccattttgcagtggaaatgatttctgtgagtttgactccaaa 12356095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 28698089 - 28698132
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||    
T  28698089 aaccattttgtagtggaaatggtttctgtgagttggactccaaa 28698132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 28979405 - 28979449
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||    
T  28979405 caaaaccattttgctgtggaaatggtttc--tgaattgtactccaaa 28979449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 7614656 - 7614606
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||| |||   ||||||||||||||||||||||    
T  7614656 atgccaaaaccattttactgtgaaaaatatttctgtgagttgtactccaaa 7614606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 4835995 - 4836028
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  4835995 gtaccggaatgccaaaaccattttgttgtggaaa 4836028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 4841440 - 4841473
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  4841440 gtaccggaatgccaaaaccattttgttgtggaaa 4841473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 7058917 - 7058884
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||||||||||||||||||||||| |||||||||    
T  7058917 gtaccggaatgccaaaaccattttcctgtggaaa 7058884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 8551167 - 8551134
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  8551167 gtaccggaatgccaaaaccattttgttgtggaaa 8551134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 2541045 - 2541073
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  2541045 gaaatggtttctgtgagttgtactccaaa 2541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 9852917 - 9852889
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  9852917 gaaatggtttctgtgagttgtactccaaa 9852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 17656816 - 17656788
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  17656816 gaaatggtttctgtgagttgtactccaaa 17656788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 30652491 - 30652451
Alignment:
Q  138 cattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||| ||||||||| ||||||||||||| ||||||||    
T  30652491 cattttgcagtggaaatgatttctgtgagttggactccaaa 30652451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 34647533 - 34647561
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  34647533 gaaatggtttctgtgagttgtactccaaa 34647561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 35301991 - 35302019
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  35301991 gaaatggtttctgtgagttgtactccaaa 35302019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 39022659 - 39022631
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  39022659 gaaatggtttctgtgagttgtactccaaa 39022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 40022750 - 40022778
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  40022750 gaaatggtttctgtgagttgtactccaaa 40022778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 28069437 - 28069551
Alignment:
Q  127 aatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatca 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| ||||    
T  28069437 aatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcatcatca 28069536  T
Q  221 acaccgtcgttcatc 235  Q
    |||||||||||||||    
T  28069537 acaccgtcgttcatc 28069551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 2826224 - 2826345
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       | |||||||||||||||||||||||||| ||    
T  2826224 gtaccggaatgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaatccattttgctgtggaaatggtttccagaatcttcaatatc 2826323  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  2826324 atcatcaacaccgtcgttcatc 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 34330035 - 34329914
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  34330035 gtaccggaatgccaaaaccattttgctgtggaaataatttttgtgagttgtactccaaacccattttactgtggaaatggtttccagaatcttcaatctc 34329936  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  34329935 atcatcaacaccgtcgttcatc 34329914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 23155746 - 23155696
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23155746 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23155696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 23334930 - 23334980
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23334930 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23334980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 11376521 - 11376571
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11376521 atgccaaaaccattttgctgtggaaatggtttctgtgagttgttctccaaa 11376571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 15059537 - 15059487
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15059537 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 15059487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 22671900 - 22671850
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22671900 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 22671850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 8949522 - 8949475
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8949522 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 8949475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 11660926 - 11660972
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11660926 caaaaccattttgctgtggaaatggtttctgtgagttgtattccaaa 11660972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 33857483 - 33857533
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  33857483 atgccaaaaccattttgttgtggaaatggtttctgtgaattgtactccaaa 33857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 39086621 - 39086571
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39086621 atgccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 39086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 42746623 - 42746573
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  42746623 atgccaaaaccattttgctgtggaaatagtttatgtgagttgtactccaaa 42746573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 35915934 - 35915889
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35915934 aaaaccattttgcagtggaaatggtttctgtgagttgtactccaaa 35915889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 16668226 - 16668273
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16668226 ccaaaaccattttgctgaggaaatggtttttgtgagttgtactccaaa 16668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 33868804 - 33868757
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33868804 ccaaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 33868757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 7286857 - 7286807
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  7286857 atgccaaaactattttgctatggaaatggtttctgtgtgttgtactccaaa 7286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 13363618 - 13363568
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  13363618 atgccaaaactgttttgctgtggaaatggtttctgtgaattgtactccaaa 13363568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 20134339 - 20134389
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  20134339 atgccagaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 20134389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 23155625 - 23155579
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  23155625 caaaatcattttgctgtgaaaatggtttctgtgagttgtactccaaa 23155579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 36864171 - 36864121
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  36864171 atgccaaaactattttgctgtggaaatagtttctgtgagttgtattccaaa 36864121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 39166280 - 39166330
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  39166280 atgctaaaaccattttgctatggaaatggtttctgtgagttatactccaaa 39166330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 39861724 - 39861770
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  39861724 caaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 39861770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 42746743 - 42746693
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  42746743 atgctaaaaccattttgctgtggaaatagtttatgtgagttgtactccaaa 42746693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 4675588 - 4675543
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  4675588 ccaaaaccattttgctgtggaaatggtt--tgtgagttgtactccaaa 4675543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 703861 - 703908
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  703861 ccaaaaccattttactgtggaaatggtttttgtgagttgtattccaaa 703908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 4675547 - 4675500
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  4675547 ccaaaacaattttgttgtggaaatggtttatgtgagttgtactccaaa 4675500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 25016468 - 25016507
Alignment:
Q  139 attttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  25016468 attttgctgtggaaatggtttctgtgagttatactccaaa 25016507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 22830692 - 22830642
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||||||||    
T  22830692 atgccaaaatcatttttttgtggaaatggtttatgtgagttgtactccaaa 22830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 2826355 - 2826388
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  2826355 gtaccggaatgccaaaaccattttgctgtggaaa 2826388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 16668051 - 16668093
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||||||||| | ||||||||| ||||||||||||||||||    
T  16668051 caaaaccatttttccgtggaaatgatttctgtgagttgtactc 16668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 18464584 - 18464630
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| ||||||||||||  || ||||||||||||    
T  18464584 caaaaccattttgctgtagaaatggtttctccgacttgtactccaaa 18464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 20696267 - 20696317
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| || ||||| ||| ||||| ||||||||||||    
T  20696267 atgccaaaaccattttgctctgaaaatgatttatgtgaattgtactccaaa 20696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 25191850 - 25191900
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| || ||||||||||||||  ||||||||||| |||||    
T  25191850 atgccaaaaccattgtgatgtggaaatggttttggtgagttgtacaccaaa 25191900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 28069573 - 28069606
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||| |||||||||||||||||||||||||||||    
T  28069573 gtactggaatgccaaaaccattttgctgtggaaa 28069606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 8949546 - 8949518
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  8949546 gaaatggtttctgtgagttgtactccaaa 8949518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 16552293 - 16552321
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  16552293 gaaatggtttctgtgagttgtactccaaa 16552321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 16668202 - 16668230
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  16668202 gaaatggtttctgtgagttgtactccaaa 16668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 18464735 - 18464763
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  18464735 gaaatggtttctgtgagttgtactccaaa 18464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 22830786 - 22830758
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  22830786 gaaatggtttctgtgagttgtactccaaa 22830758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 42512678 - 42512650
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  42512678 gaaatggtttctgtgagttgtactccaaa 42512650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 24736770 - 24736891
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  24736770 gtactggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctc 24736869  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  24736870 atcatcaacaccgtcgttcatc 24736891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 878096 - 877975
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||| ||    
T  878096 gtaccggaatgccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatttc 877997  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  877996 atcatcaacaccgtcgttcatc 877975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 878239 - 878118
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  878239 gtaccggaatgtcaaaaccattttgttgtgaaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctc 878140  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  878139 atcatcaacaccgtcgttcatc 878118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 33345530 - 33345651
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||||||||||    
T  33345530 gtaccggaatgccaaaaccatttatctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccataatcttcaatctc 33345629  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  33345630 atcatcaacaccgtcgttcatc 33345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 16967558 - 16967605
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16967558 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 16967605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 7765241 - 7765191
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7765241 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 7765191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 18611997 - 18611951
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18611997 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 18611951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 22857617 - 22857667
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22857617 atgccaaaaccattttactgtggaaatggtttctgtgagttgtactccaaa 22857667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 10588896 - 10588943
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10588896 ccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 10588943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 10698717 - 10698768
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagtt-gtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10698717 atgccaaaaccattttgctgtggaaatggtttctgtgagttagtactccaaa 10698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 15008248 - 15008295
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15008248 ccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 15008295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 29157828 - 29157781
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29157828 ccaaaactattttgctgtggaaatggtttctgtgagttgtactccaaa 29157781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 19281424 - 19281474
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  19281424 atgccaaaaccattttgctgtgaaaatagtttctgtgagttgtactccaaa 19281474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 25119410 - 25119460
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25119410 atgccaaaaccattttgctgtgtaaatggtttctgtcagttgtactccaaa 25119460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 30387140 - 30387190
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  30387140 atgccaaaatcattttgctgtagaaatggtttctgtgagttgtactccaaa 30387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 15008074 - 15008119
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  15008074 aaaaccattttgctgtggaaatggtttctgtgagctgtactccaaa 15008119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 4102620 - 4102667
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4102620 ccaaaaccattttgctgtggaaatggtttatgtgagttgtacttcaaa 4102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 4338215 - 4338262
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  4338215 ccaaaaccattttgctgtggaaatgatttctatgagttgtactccaaa 4338262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 22031737 - 22031784
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22031737 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 22031784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 30909248 - 30909201
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  30909248 ccaaaaccattttgctatggaaatggtttctgtgtgttgtactccaaa 30909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 4338126 - 4338176
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  4338126 atgccaaaaccattttgcagtggaaatggtttttgtgagttggactccaaa 4338176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 7371038 - 7371088
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  7371038 atgccaaaactattttgctttagaaatggtttctgtgagttgtactccaaa 7371088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 18611813 - 18611775
Alignment:
Q  140 ttttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18611813 ttttgctgtggaaatggtttctgtgagttgtactccaaa 18611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 21384933 - 21384979
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  21384933 caaaaccattttgctatgaaaatggtttctgtgagttgtactccaaa 21384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 26713114 - 26713164
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  26713114 atgccaaaaccattttgatgtggaaatggtttctgggagctgtactccaaa 26713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27079726 - 27079776
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  27079726 atgcaaaaaccattttgttgtggaaatgatttctgtgagttgtactccaaa 27079776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 4338172 - 4338219
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  4338172 ccaaaaccattttgcagtggaaatggtttctgttagttggactccaaa 4338219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 28129416 - 28129369
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  28129416 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 28129369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 11140396 - 11140446
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||||||||| |||||||||  ||||||||||||||||||||||    
T  11140396 atgcaaaaaccattttgttgtggaaataatttctgtgagttgtactccaaa 11140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 29163362 - 29163316
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  29163362 caaaaccattttgctgtggaaatgatttatgtgaattgtactccaaa 29163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 4102445 - 4102490
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||    
T  4102445 aaaaccattttgcagtggaaatggtttctgtgaactgtactccaaa 4102490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 30909418 - 30909377
Alignment:
Q  137 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  30909418 ccattttgccttggaaatggtttctgtgagttgtactccaaa 30909377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 4102664 - 4102695
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgt 163  Q
    ||||||||||||||||||||||||||||||||    
T  4102664 caaaaccattttgctgtggaaatggtttctgt 4102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 14237923 - 14237969
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  14237923 caaaactattttgctgtggaaatgatttctgtcacttgtactccaaa 14237969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 18612218 - 18612184
Alignment:
Q  201 aatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||| |||||||||||||||||||    
T  18612218 aatcttcaatctcatcatcaacaccgtcgttcatc 18612184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 20522788 - 20522838
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||| |  ||||||||||||| ||||||||||||||||    
T  20522788 atgccaaaacaattttgtttcggaaatggtttctatgagttgtactccaaa 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 33345487 - 33345520
Alignment:
Q  202 atcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||||||| ||||||||||    
T  33345487 atcttcaatctcattatcaacactgtcgttcatc 33345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 33345661 - 33345694
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  33345661 gtaccggaatgccaaaaccattttgttgtggaaa 33345694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 18611846 - 18611818
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  18611846 gaaatggtttctgtgagttgtactccaaa 18611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 24736712 - 24736748
Alignment:
Q  199 agaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  24736712 agaatcttcaatctcatcatcaacactgtcgttcatc 24736748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 25119152 - 25119180
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  25119152 gaaatggtttctgtgagttgtactccaaa 25119180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 18297375 - 18297496
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  18297375 gtaccggaatgtcaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 18297474  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  18297475 atcatcaacaccgtcgttcatc 18297496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 4578889 - 4579009
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  4578889 gtaccggaatgccaaaaccattttgctgtgg-aatggtttttgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 4578987  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  4578988 atcatcaacaccgtcgttcatc 4579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 25193704 - 25193583
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||       | || ||||||||||||||||||||||||||    
T  25193704 gtaccagaatgccaaaaccattttgctttgaaaatggtttctgtgagttgtactccaaacccattttgctgtgtaaatggtttccagaatcttcaatctc 25193605  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  25193604 atcatcaacaccgtcgttcatc 25193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 25193835 - 25193714
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||       | || ||||||||||||||||||||||||||    
T  25193835 gtaccagaatgccaaaaccattttgctttgaaaatggtttctgtgagttgtactccaaacccattttgctgtgtaaatggtttccagaatcttcaatctc 25193736  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  25193735 atcatcaacaccgtcgttcatc 25193714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 14550626 - 14550743
Alignment:
Q  124 cggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcatta 217  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||       | ||||||||||||||||||| ||||||||||| |    
T  14550626 cggaatgccaaaaccattttgctgtggaaatgatttatgtgagttgtactccaaacccattttgctgtggaaatggtttccagaattttcaatctcatca 14550725  T
Q  218 tcaacaccgtcgttcatc 235  Q
    ||||||||||| ||||||    
T  14550726 tcaacaccgtcattcatc 14550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 2264498 - 2264377
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| |       | ||||||||||||||| |||||||||||||    
T  2264498 gtaccggaatgccaaaaccattttgttgtggaaatgatttttgtgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctc 2264399  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||| ||||||||||    
T  2264398 atcatcaacactgtcgttcatc 2264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 2264367 - 2264258
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacc------cgtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||| |||||||||||||||    
T  2264367 gtaccagaatgccaaaaccattttgctgtagaaatggtttctgtgagttgtactccaaaccaattttgttgtggaaatggtttctagaatcttcaatctc 2264268  T
Q  214 attatcaaca 223  Q
    || |||||||    
T  2264267 atcatcaaca 2264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 4578759 - 4578879
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||       | |||||||| ||| |||||| |||||||||    
T  4578759 gtacctgaatgccaaaaccattttgctgtgg-aatggtttttgtgagttgtactccaaacccattttgctgtggaaatgattttcagaattttcaatctc 4578857  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  4578858 atcatcaacaccgtcgttcatc 4578879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 4579019 - 4579137
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||||| |||||||  | |||||||||||||||||||       | |||||||||||||||||| ||||||||||    
T  4579019 gtaccggaatgccaaaaccattttgctgtgg-aatggtt--tttgagttgtactccaaacccattttgctgtggaaatggtttccagaagcttcaatctc 4579115  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||| ||||||    
T  4579116 atcatcaacaccgtcattcatc 4579137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 19246766 - 19246716
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19246766 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 19246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31711614 - 31711564
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31711614 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 31711564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 1095308 - 1095358
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1095308 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 1095358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 20661535 - 20661585
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20661535 atgccaaaaccattttgctgtggaaatggcttctgtgagttgtactccaaa 20661585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 20710603 - 20710557
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20710603 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 20710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31783897 - 31783847
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31783897 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 31783847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 42364596 - 42364546
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42364596 atgccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 42364546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 4281220 - 4281267
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4281220 ccaaaaccattttgctgtggaaattgtttctgtgagttgtactccaaa 4281267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 39548484 - 39548441
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39548484 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 39548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 16111617 - 16111567
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  16111617 atgccaaaaccattttactgtgaaaatggtttctgtgagttgtactccaaa 16111567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 30777466 - 30777516
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  30777466 atgccaaaattattttgctgtggaaatggtttctgtgagttgtactccaaa 30777516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 36636150 - 36636200
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  36636150 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 36636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 37867254 - 37867208
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  37867254 caaaactattttgctgtggaaatggtttctgtgagttgtactccaaa 37867208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 41345294 - 41345344
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  41345294 atgccaaaaccgttttgctgtggaaatggtttatgtgagttgtactccaaa 41345344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 43823520 - 43823470
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  43823520 atgccaaaatcattttgctgtggaaatggtttatgtgagttgtactccaaa 43823470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 13081317 - 13081357
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 171  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13081317 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 13081357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 34726746 - 34726786
Alignment:
Q  138 cattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34726746 cattttgctgtggaaatggtttctgtgagttgtactccaaa 34726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 3928265 - 3928218
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3928265 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 3928218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28056012 - 28056059
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28056012 ccaaaaccattttgctgtgaaaatggtttctgtgagttatactccaaa 28056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 44341888 - 44341935
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  44341888 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 44341935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 3147230 - 3147276
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  3147230 caaaacaattttgctgtggaaatggtttatgtgagttgtactccaaa 3147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 4281044 - 4281090
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  4281044 caaaaccattttgttgtggaaatggtttctgtgagttatactccaaa 4281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 12449187 - 12449233
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12449187 caaaaccattttgctgtgaaaatggtttctttgagttgtactccaaa 12449233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 22588458 - 22588508
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  22588458 atgccaaaaacattttgttgtggaaatgatttctgtgagttgtactccaaa 22588508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 35126633 - 35126683
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  35126633 atgccaaaatcattttactgtggaaatgatttctgtgagttgtactccaaa 35126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 41345474 - 41345520
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  41345474 caaaaccattttgatgtggaaatggtttctgtgtgttgtactccaaa 41345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 44915435 - 44915481
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  44915435 caaaaccattttgctgtgaaaatggtttctgtgaattgtactccaaa 44915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 13081278 - 13081321
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  13081278 aaccattttgcagtggaaatggtttctgtgagttggactccaaa 13081321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 28049202 - 28049155
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  28049202 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 28049155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 36636329 - 36636376
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  36636329 ccaaaaccattttgctgtggaaatgatttatgtgagttgtacttcaaa 36636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 39548523 - 39548480
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  39548523 aaccattttgcagtggaaatggtttatgtgagttgtactccaaa 39548480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 43823340 - 43823293
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  43823340 ccaaaaccattttgttgtggaaatgatttatgtgagttgtactccaaa 43823293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 20193971 - 20194017
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  20193971 caaaaccattttactgtgaaaatgatttctgtgagttgtactccaaa 20194017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 22596444 - 22596494
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||| |||||    
T  22596444 atgccaaaaccattttattgtggaaatagtttctgtgagttgtacaccaaa 22596494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 24183541 - 24183587
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  24183541 caaaatcattttgttgtggaaatggtttatgtgagttgtactccaaa 24183587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 2264236 - 2264203
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  2264236 gtaccggaatgccaaaaccattttgctgtggaaa 2264203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 4578713 - 4578749
Alignment:
Q  199 agaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4578713 agaatcttcaatctcatcatcaacaccgtcgttcatc 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 2264543 - 2264508
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  2264543 gaatcttcaatctcatcatcaacaccgtcgttcatc 2264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 4280870 - 4280905
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  4280870 gaatcttcaatctcatcatcaacaccgtcgttcatc 4280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 16141414 - 16141457
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||    
T  16141414 ccaaaatcattttgttgtggaaatgatttctgtgagttgtactc 16141457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 25995945 - 25995910
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  25995945 gaatcttcaatctcatcatcaacaccgtcgttcatc 25995910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 43823740 - 43823705
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  43823740 gaatcttcaatctcatcatcaacaccgtcgttcatc 43823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 20570864 - 20570818
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| |||||||||||||| |||||||| ||||||||||| ||||    
T  20570864 caaaactattttgctgtggaattggtttctatgagttgtactgcaaa 20570818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 4579159 - 4579192
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||| ||||||||||||||||    
T  4579159 gtaccggaatgccaaaatcattttgctgtggaaa 4579192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 16141459 - 16141504
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  16141459 aaaatcatttttctgtggaaatgatttatgtgagttgtactccaaa 16141504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 21156529 - 21156570
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 172  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  21156529 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 21156570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 25193561 - 25193528
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  25193561 gtaccggaatgccaaaaccattttgttgtggaaa 25193528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 14550766 - 14550798
Alignment:
Q  121 taccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||||||||||||||||||||||| ||||||||    
T  14550766 taccggaatgccaaaaccattttgttgtggaaa 14550798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 16141378 - 16141418
Alignment:
Q  138 cattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  16141378 cattttgcactggaaatggtttctgtgagttggactccaaa 16141418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 20710452 - 20710424
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  20710452 gaaatggtttctgtgagttgtactccaaa 20710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 23174602 - 23174723
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  23174602 gtaccggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctc 23174701  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||| ||||||||||    
T  23174702 atcatcaacactgtcgttcatc 23174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 180559 - 180438
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  180559 gtaccggaatgccaaaaccatttttctgtggaaattgtttctatgagttgtactccaaacccattttactgtggaaatggtttccagaatcttcaatctc 180460  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  180459 atcatcaacaccgtcgttcatc 180438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 23174737 - 23174854
Alignment:
Q  124 cggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcatta 217  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| |    
T  23174737 cggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatca 23174836  T
Q  218 tcaacaccgtcgttcatc 235  Q
    |||||| |||||||||||    
T  23174837 tcaacatcgtcgttcatc 23174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 180699 - 180578
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||| | |      ||||||||||||||||||||||||||||    
T  180699 gtaccggaatgccaaaaccagttttctgtaaaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctc 180600  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  180599 atcatcaacaccgtcgttcatc 180578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 11422424 - 11422303
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||| |||||||||| ||||||| ||||||| |||||| |||||||||||||||||||||       | |||||||||||| ||||||||||||||||    
T  11422424 gtaccgaaatgccaaaatcattttgatgtggaagtggtttgtgtgagttgtactccaaacccattttgctgtggaaatggttttcagaatcttcaatctc 11422325  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || || |||| |||||||||||    
T  11422324 atcattaacatcgtcgttcatc 11422303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 23921137 - 23921195
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23921137 gtactggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 21256047 - 21256097
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21256047 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 21256097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28322610 - 28322657
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28322610 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 28322657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 11354451 - 11354501
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11354451 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 11354501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 18057633 - 18057583
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18057633 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 18057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 18928882 - 18928832
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18928882 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 18928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 23319235 - 23319285
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23319235 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 23319285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31084239 - 31084189
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31084239 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 31084189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 32595208 - 32595158
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32595208 atgccaaaaccattttgccgtggaaatggtttctgtgagttgtactccaaa 32595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 33157095 - 33157045
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33157095 atgccaaaaccattttcctgtggaaatggtttctgtgagttgtactccaaa 33157045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 37642950 - 37642904
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37642950 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 37642904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 45890441 - 45890391
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45890441 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 45890391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 47693806 - 47693856
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47693806 atgccaaaaccattttgctgtggaaatggtttgtgtgagttgtactccaaa 47693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 2741566 - 2741519
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2741566 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 2741519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 30788837 - 30788790
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30788837 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 30788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 31084059 - 31084012
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31084059 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 31084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 35197599 - 35197646
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35197599 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 35197646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 1395268 - 1395218
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  1395268 atgccaaaatcattttgctgtggaaatagtttctgtgagttgtactccaaa 1395218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 12070550 - 12070600
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  12070550 atgctaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 12070600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 14229301 - 14229351
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  14229301 atgccaaaatcattttgatgtggaaatggtttctgtgagttgtactccaaa 14229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 17811187 - 17811137
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  17811187 atgccaaaaccattttgctgtgaaaatggtttttgtgagttgtactccaaa 17811137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 18952526 - 18952576
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18952526 atgccaaaatcattttactgtggaaatggtttctgtgagttgtactccaaa 18952576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 19216661 - 19216611
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19216661 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 19216611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 20506516 - 20506566
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20506516 atgcaaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 20506566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 28322564 - 28322614
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  28322564 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 28322614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 29945321 - 29945271
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29945321 atgccaaaaccattttgctgtaaaaatggtttctgtgagttgtactccaaa 29945271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31763879 - 31763829
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31763879 atgccaaaaccattttactgtggaaatggtttttgtgagttgtactccaaa 31763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 35197420 - 35197470
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35197420 atgccaaaaccatcttgttgtggaaatggtttctgtgagttgtactccaaa 35197470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 44261182 - 44261132
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  44261182 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 44261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 30803027 - 30802979
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactcca 176  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  30803027 atgccaaaatcattttgctgtggaaatggtttatgtgagttgtactcca 30802979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 16116526 - 16116479
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16116526 ccaaaatcattttgttgtggaaatggtttctgtgagttgtactccaaa 16116479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 19216615 - 19216568
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  19216615 ccaaaaccattttgctgtggaaattgcttctgtgagttgtactccaaa 19216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 23921323 - 23921370
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  23921323 ccaaaaccattttgctgtggaaatggtttttgtgagttgtacttcaaa 23921370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 31528998 - 31529045
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31528998 ccaaaaccatttttctgtggaaatggtttatgtgagttgtactccaaa 31529045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 33097869 - 33097822
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  33097869 ccaaaatcattttgctgtggaaatggtttctgtgagttggactccaaa 33097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 51420915 - 51420868
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  51420915 ccaaaatcattttgctgtggaaatggtttctgtgagttgcactccaaa 51420868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 51801051 - 51801098
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  51801051 ccaaaaccattttgctgtggaaatggcttttgtgagttgtactccaaa 51801098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 2741605 - 2741559
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc 181  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  2741605 aaccattttgtagtggaaatggtttctgtgagttgtactccaaaccc 2741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 4097235 - 4097285
Alignment:
Q  185 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  4097235 tggaaatggtttccagaatcttcaatctcatcatcaacatcatcgttcatc 4097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 9628547 - 9628589
Alignment:
Q  136 accattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9628547 accattttactgtggaaatggtttctgtgagttgtactccaaa 9628589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 14389948 - 14389898
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  14389948 atgccaaaaccattttgccttggaaatggtttctgtgagttatactccaaa 14389898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 16116705 - 16116655
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  16116705 atgcaaaaaccattttgatgtgaaaatggtttctgtgagttgtactccaaa 16116655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 17893213 - 17893263
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  17893213 atgccaaaaccattttgttgtggaaatagtttttgtgagttgtactccaaa 17893263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 35754673 - 35754623
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35754673 atgcaaaaaccattttgctgtggaaatgatttctgtaagttgtactccaaa 35754623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 44687778 - 44687828
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  44687778 atgccaaaaccattttgcagtggaaatggtttttgtgagttggactccaaa 44687828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 45849253 - 45849299
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  45849253 caaaaccattttgctgtggaaatggtttttgttagttgtactccaaa 45849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 19850708 - 19850661
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  19850708 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 19850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 31528959 - 31529002
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  31528959 aaccattttgcagtggaaatggtttctgtgagttggactccaaa 31529002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 44261136 - 44261089
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||    
T  44261136 ccaaaaccattttgttgtggaaatggtttctgtgactcgtactccaaa 44261089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 44687867 - 44687914
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  44687867 ccaaaaccattttgttgtggaaatggtttatgtgagttgtacttcaaa 44687914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 51420958 - 51420911
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  51420958 ccaaaaccattttgcagtggaaatggtttctgtgagtttgactccaaa 51420911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 51801012 - 51801055
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  51801012 aaccattttgcagtggaaatggtttctgtgagttggactccaaa 51801055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 6708417 - 6708371
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  6708417 caaaaccattttactgtgaaaatgatttctgtgagttgtactccaaa 6708371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 9040995 - 9041041
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  9040995 caaaaccattttactgtggaaatggtttctatgaattgtactccaaa 9041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 10498086 - 10498040
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  10498086 caaaaccattttgctgtggaaatggcttcaatgagttgtactccaaa 10498040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 12796533 - 12796483
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| ||||  |||| |||||||||||||||||||||||    
T  12796533 atgccaaaaccattttcctgtaaaaatagtttctgtgagttgtactccaaa 12796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 32143712 - 32143758
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  32143712 caaaaccattttactgtggaaatgatttctgtgaattgtactccaaa 32143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 51904826 - 51904872
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  51904826 caaaaccattttactgtggaaatgatttctgtgaattgtactccaaa 51904872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 180431 - 180398
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  180431 gtaccggaatgccaaaaccattttgctgtggaaa 180398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 8401607 - 8401640
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  8401607 gtaccggaatgccaaaaccattttgctgtggaaa 8401640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 34370379 - 34370346
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  34370379 gtaccggaatgccaaaaccattttgctgtggaaa 34370346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 10497911 - 10497866
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||    
T  10497911 ccaaaaccattttgctgtggaaatgatttctgt--gttgtactccaaa 10497866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 180745 - 180710
Alignment:
Q  199 agaatcttcaatctcattatcaacaccgtcgttcat 234  Q
    ||||||||||||||||| ||||||||||||||||||    
T  180745 agaatcttcaatctcatcatcaacaccgtcgttcat 180710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 8401562 - 8401597
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  8401562 gaatcttcaatctcatcatcaacaccgtcgttcatc 8401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 16116483 - 16116436
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||| |||||||||||| |||||||| |||||||||    
T  16116483 ccaaaaccattatgctttggaaatggtttatgtgagttctactccaaa 16116436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 20506694 - 20506737
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||||||||||| |||||||||||||| |||| |||||||||    
T  20506694 ccaaaaccattttgttgtggaaatggtttatgtgtgttgtactc 20506737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 23277352 - 23277395
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||||||||||| |||||||| |||||||||| |||||||||    
T  23277352 ccaaaaccattttgttgtggaaacggtttctgtgtgttgtactc 23277395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 23921092 - 23921127
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  23921092 gaatcttcaatctcatcatcaacaccgtcgttcatc 23921127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 34370427 - 34370392
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  34370427 gaatcttcaatctcatcatcaacaccgtcgttcatc 34370392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 35197202 - 35197237
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  35197202 gaatcttcaatctcatcatcaacaccgtcgttcatc 35197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 44687824 - 44687871
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||| |||||||  |||||||||||||||||||||| ||||||||    
T  44687824 ccaaaactattttgcaatggaaatggtttctgtgagttggactccaaa 44687871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 24368519 - 24368469
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||    
T  24368519 atgccaaaaccattttgttgtgaaaatgatttttgtgagttgtacttcaaa 24368469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 30788883 - 30788833
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||| ||| ||||||||| ||||||||| ||||||||    
T  30788883 atgctaaaaccattttgcagtgaaaatggtttttgtgagttggactccaaa 30788833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 46590699 - 46590749
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  46590699 atgcctaaaccattttgttgtggaaatgatttttgtgagttgtacttcaaa 46590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 11422277 - 11422248
Alignment:
Q  124 cggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||    
T  11422277 cggaatgccaaaaccattttgctgtggaaa 11422248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 23174876 - 23174909
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||||| |||||||||||||||||||||||||||    
T  23174876 gtaccgaaatgccaaaaccattttgctgtggaaa 23174909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 37227299 - 37227258
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 172  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  37227299 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 37227258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 10497935 - 10497907
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  10497935 gaaatggtttctgtgagttgtactccaaa 10497907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 14390042 - 14390014
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  14390042 gaaatggtttctgtgagttgtactccaaa 14390014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 16116550 - 16116522
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  16116550 gaaatggtttctgtgagttgtactccaaa 16116522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 17893118 - 17893146
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  17893118 gaaatggtttctgtgagttgtactccaaa 17893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 21256201 - 21256229
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  21256201 gaaatggtttctgtgagttgtactccaaa 21256229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 23277328 - 23277356
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  23277328 gaaatggtttctgtgagttgtactccaaa 23277356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 23921299 - 23921327
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  23921299 gaaatggtttctgtgagttgtactccaaa 23921327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 24368614 - 24368586
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  24368614 gaaatggtttctgtgagttgtactccaaa 24368586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 31084083 - 31084055
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  31084083 gaaatggtttctgtgagttgtactccaaa 31084055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 35754766 - 35754738
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  35754766 gaaatggtttctgtgagttgtactccaaa 35754738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 37642800 - 37642772
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  37642800 gaaatggtttctgtgagttgtactccaaa 37642772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 45849154 - 45849182
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  45849154 gaaatggtttctgtgagttgtactccaaa 45849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 19384581 - 19384701
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacc-----cgtatggaaatggtttccagaatcttcaatctca 214  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||    
T  19384581 gtaccgaaatgccaaaaccatttttctgtggaaatggtttctgtgagttgtactccaaaccattttgttgtggaaatggtttccagaatcttcaatctca 19384680  T
Q  215 ttatcaacaccgtcgttcatc 235  Q
    | |||||||||||||||||||    
T  19384681 tcatcaacaccgtcgttcatc 19384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 52986694 - 52986814
Alignment:
Q  121 taccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctca 214  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||| |||||||    
T  52986694 taccggaatgccaaaaccattttgctatggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccaaaatcttgaatctca 52986793  T
Q  215 ttatcaacaccgtcgttcatc 235  Q
    | |||||||||||||||||||    
T  52986794 tcatcaacaccgtcgttcatc 52986814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 52986824 - 52986945
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt------atggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |       |||||||||||||||||||||| ||||||    
T  52986824 gtaccggaatgccaaaaccattttactgtggaaatggtttctatgagttgtactccaaacccattttgcagtggaaatggtttccagaatcttaaatctc 52986923  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || ||||| |||||||||||||    
T  52986924 atcatcaataccgtcgttcatc 52986945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 31853026 - 31852905
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||||||||||    
T  31853026 gtaccggaatgccaaaatcatttatctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccataatcttcaatctc 31852927  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||| ||||||||||    
T  31852926 atcatcaacactgtcgttcatc 31852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 50754905 - 50754784
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  50754905 gtaccagaatgccaaaaccatttagctatggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 50754806  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||| ||||||||||    
T  50754805 atcatcaacactgtcgttcatc 50754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 50755036 - 50754915
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  50755036 gtaccagaatgccaaaaccatttagctatggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 50754937  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||| ||||||||||    
T  50754936 atcatcaacactgtcgttcatc 50754915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 51361713 - 51361834
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||       | |||||||||||||||||||||| || |||    
T  51361713 gtaccggaatgccaaaaccattttgttgtggaaatgatttctctgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttgaacctc 51361812  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||| ||||||||    
T  51361813 atcatcaacaccgccgttcatc 51361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 7044568 - 7044687
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctc 213  Q
    ||||| ||||| ||||||||||||| |||| ||||| ||| ||||||||||||||||  ||| | |      ||||||||||||||||||||||||||||    
T  7044568 gtaccagaatgtcaaaaccattttgttgtgaaaatgatttatgtgagttgtactcca--cccattttgttgtggaaatggtttccagaatcttcaatctc 7044665  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  7044666 atcatcaacaccgtcgttcatc 7044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 23755932 - 23755885
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23755932 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23755885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 8718951 - 8718901
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8718951 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 8718901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 9070838 - 9070788
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9070838 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 9070788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 16653600 - 16653550
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16653600 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 16653550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 19012495 - 19012445
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19012495 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 19012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27446153 - 27446203
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27446153 atgccaaaaccattttgctgtggaaatggtttctgtgaattgtactccaaa 27446203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 47729007 - 47728957
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47729007 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 47728957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 47924306 - 47924356
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47924306 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactgcaaa 47924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 51681419 - 51681469
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51681419 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 51681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 12974131 - 12974180
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12974131 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacaccaa 12974180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 53595488 - 53595444
Alignment:
Q  134 aaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  53595488 aaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 53595444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28299512 - 28299559
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  28299512 ccaaaaccattttgctatggaaatggtttctgtgagttgtactccaaa 28299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 23756111 - 23756061
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  23756111 atgccaaaaccattttgatgtggaaatggcttctgtgagttgtactccaaa 23756061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 41191616 - 41191666
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  41191616 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 41191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 16276904 - 16276949
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  16276904 aaaaacattttgctgtggaaatggtttctgtgagttgtactccaaa 16276949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 23699924 - 23699877
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23699924 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23699877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 23718379 - 23718332
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23718379 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23718332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 23736835 - 23736788
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23736835 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23736788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28299555 - 28299602
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  28299555 ccaaaaccattttgttgtggaaatggtttccgtgagttgtactccaaa 28299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 39194554 - 39194601
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39194554 ccaaaaccattttgatgtggaaatggtttatgtgagttgtactccaaa 39194601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 41191796 - 41191843
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  41191796 ccaaaaccattttgttgtggaaatggtttctgtgtgttgtactccaaa 41191843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 8036929 - 8036979
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  8036929 atgccaaaaccattttgcggtggaaatggtttccttgagttgtactccaaa 8036979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 28299470 - 28299516
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  28299470 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 28299516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 34562610 - 34562656
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  34562610 caaaaccattttgctgtgaaaatggtttatgtgagttgtactccaaa 34562656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 36185849 - 36185895
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  36185849 caaaaccatttttctgtggaaatggtttttgtgagttgtactccaaa 36185895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 49053370 - 49053416
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  49053370 caaaatcattttgctgtggaaatggtttctgtgagttgtacttcaaa 49053416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 53595534 - 53595494
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 171  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  53595534 ccaaaaccattttgatgtggaaatggtttctgtgagttgta 53595494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 34562787 - 34562830
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  34562787 ccaaaaccattttgctgtggaaatggtttctgtgcgttgaactc 34562830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 9643038 - 9643088
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||| ||||    
T  9643038 atgccaaaaccattttggtgtggaaatgatttctgtgagttggacttcaaa 9643088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 14743647 - 14743597
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||||||||||    
T  14743647 atgccaaaactattttgctgtggaaataatttatgtgagttgtactccaaa 14743597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 38345384 - 38345334
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||||||||||||||||| |||| | |||||||    
T  38345384 atgccaaaaccattttgccgtggaaatggtttctgtaagttatcctccaaa 38345334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 51846214 - 51846264
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||||||||| ||||||| |||||||| ||||||||||||||    
T  51846214 atgcctaaaccattttgctatggaaattgtttctgtcagttgtactccaaa 51846264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 50754774 - 50754741
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  50754774 gtaccggaatgccaaaaccattttgctgtggaaa 50754741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 51361840 - 51361873
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  51361840 gtaccggaatgccaaaaccattttgctgtggaaa 51361873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 52986955 - 52986988
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  52986955 gtaccggaatgccaaaaccattttgctgtggaaa 52986988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 7044511 - 7044546
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  7044511 gaatcttcaatctcatcatcaacaccgtcgttcatc 7044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 19384536 - 19384571
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  19384536 gaatcttcaatctcatcatcaacaccgtcgttcatc 19384571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 50755081 - 50755046
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||||||||||| |||||||||||    
T  50755081 gaatcttcaatctcattatcaacagcgtcgttcatc 50755046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 51361668 - 51361703
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  51361668 gaatcttcaatctcatcatcaacaccgtcgttcatc 51361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 53595573 - 53595530
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  53595573 aaccattttgcagtggaaatggtttatgtgagttggactccaaa 53595530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 8061603 - 8061557
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||    
T  8061603 caaaaccattgtgctgtggagatggttttggtgagttgtactccaaa 8061557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 30794949 - 30794903
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||| |||||||||||||||| | |||||||||    
T  30794949 caaaactattttgctgtgaaaatggtttctgtgagctatactccaaa 30794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 52986636 - 52986670
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcat 234  Q
    |||||||||||||||| ||||||||||||||||||    
T  52986636 gaatcttcaatctcatcatcaacaccgtcgttcat 52986670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 7044697 - 7044730
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||| ||||||    
T  7044697 gtaccggaatgccaaaaccattttgctatggaaa 7044730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 9183781 - 9183814
Alignment:
Q  145 ctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||||||||||||||||||||||||    
T  9183781 ctgtgaaaatggtttctgtgagttgtactccaaa 9183814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 11982849 - 11982808
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 172  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  11982849 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 11982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 31852883 - 31852850
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  31852883 gtaccggaatgccaaaaccattttgttgtggaaa 31852850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 19012560 - 19012532
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  19012560 gaaatggtttctgtgagttgtactccaaa 19012532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 23755956 - 23755928
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  23755956 gaaatggtttctgtgagttgtactccaaa 23755928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 34562763 - 34562791
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  34562763 gaaatggtttctgtgagttgtactccaaa 34562791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 35221594 - 35221622
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  35221594 gaaatggtttctgtgagttgtactccaaa 35221622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 36185772 - 36185800
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  36185772 gaaatggtttctgtgagttgtactccaaa 36185800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 38245767 - 38245646
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||       | |||||||||||||||||||||| ||||||    
T  38245767 gtaccggaatgccaaaaccattttgctgtgtaaatggtttctgtgagttgtactacaaacccattttgttgtggaaatggtttccagaatcttaaatctc 38245668  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  38245667 atcatcaacaccgtcgttcatc 38245646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 10473361 - 10473241
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc-----gtatggaaatggtttccagaatcttcaatctca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||   | ||||||||||||||||||||||||||    
T  10473361 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaatggtttccagaatcttcaatctca 10473262  T
Q  215 ttatcaacaccgtcgttcatc 235  Q
    | ||||||| ||| |||||||    
T  10473261 tcatcaacatcgttgttcatc 10473241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 10473492 - 10473371
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  10473492 gtaccggaatgccaaaactattttgttgtggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctc 10473393  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||| ||||||||||    
T  10473392 atcatcaacactgtcgttcatc 10473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 45256732 - 45256611
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||       | ||||||||||||| |||||||||||||||    
T  45256732 gtaccggaatgccaaaaccattttgctgtagaaatggtttatgtgagttgtattccaaacccattttgttgtggaaatggtttcgagaatcttcaatctc 45256633  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||||||||||    
T  45256632 atcatcaacaccgtcgttcatc 45256611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 638838 - 638717
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||       | ||||||||||||| |||||||||||||||    
T  638838 gtaccggaatgccaaaaccatttttctatggaaatggtttttgtgagttgtactccaaacccattttgctgtggaaatggtttctagaatcttcaatctc 638739  T
Q  214 attatcaacaccgtcgttcatc 235  Q
    || |||||||||||| ||||||    
T  638738 atcatcaacaccgtcattcatc 638717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 50644548 - 50644490
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50644548 gtaccagaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 50644490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 12722878 - 12722928
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722878 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 12722928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 17109859 - 17109909
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17109859 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 17109909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 21995774 - 21995724
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21995774 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 21995724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 54895508 - 54895458
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54895508 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 54895458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 26577456 - 26577554
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 213  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||       | |||||||||||||||||||||||||||||    
T  26577456 gtaccggaatgccata-ccattttgttgtggaaatggtttctgtgagttgtaatccaaacccattttgatgtggaaatggtttccagaatcttcaatctc 26577554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 6385733 - 6385783
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6385733 atgccaaaaccattttgctgtggaaatggtttctgtgagttggactccaaa 6385783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 8157229 - 8157279
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8157229 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 8157279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 9553068 - 9553118
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9553068 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 9553118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 25573595 - 25573645
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25573595 atgccaaaaccattttgctgtggaaatggtttctgtgagttggactccaaa 25573645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 27765103 - 27765053
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27765103 atgccaaaaccattttgctgtggaaatggtttgtgtgagttgtactccaaa 27765053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 31763048 - 31763098
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31763048 atgccaaaaccattttggtgtggaaatggtttctgtgagttgtactccaaa 31763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 36924341 - 36924295
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36924341 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 36924295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 50562891 - 50562941
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50562891 atgccaaaaccattttgctgtgtaaatggtttctgtgagttgtactccaaa 50562941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 6385779 - 6385826
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6385779 ccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 6385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 29826090 - 29826137
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29826090 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 29826137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 2124485 - 2124535
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  2124485 atgccaaaatcattttgctgtggaaatggtttctgtgagttttactccaaa 2124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 8166018 - 8166068
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8166018 atgcaaaaactattttgctgtggaaatggtttctgtgagttgtactccaaa 8166068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 10374147 - 10374097
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  10374147 atgccaaaaccattttgccgtgaaaatggtttctgtgagttgtactccaaa 10374097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 16474964 - 16475010
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  16474964 caaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 16475010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 18924101 - 18924051
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  18924101 atgccaaaaccattttgctgtggaaattgtttctgtgagttgtacttcaaa 18924051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 21097956 - 21097906
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  21097956 atgccaaaaccattttgatgtggaaatggtttatgtgagttgtactccaaa 21097906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 30358670 - 30358628
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30358670 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 30358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 37059855 - 37059905
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  37059855 atgccaaaactattttgctgtggaaatggtttttgtgagttgtactccaaa 37059905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 43374551 - 43374501
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43374551 atgccaaaaccattttgctatggaaatggtttatgtgagttgtactccaaa 43374501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 22180430 - 22180475
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  22180430 aaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 22180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 49137340 - 49137385
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  49137340 aaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 49137385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 25573641 - 25573685
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactcc 175  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  25573641 ccaaaaccattttgttgtggaaatggtttctgtgagttgtactcc 25573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 1729007 - 1729054
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  1729007 ccaaaaccattttgctgtggaaatgatttctgtgtgttgtactccaaa 1729054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 4169243 - 4169200
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgta 171  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  4169243 atgccaaaactattttgctgtggaaatggtttctgtgagttgta 4169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 29825918 - 29825961
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  29825918 aaccattttgctgtggaaatggtttctgtgagttctactccaaa 29825961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 38010551 - 38010504
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38010551 ccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 38010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 1492772 - 1492726
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  1492772 caaaaccattttactatggaaatggtttctgtgagttgtactccaaa 1492726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 6841960 - 6842010
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6841960 atgctaaaaccattttactgtggaaatggtttctgtaagttgtactccaaa 6842010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 8165902 - 8165952
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8165902 atgcaaaaactattttgctgtggaaatggtttctgtgagttgtattccaaa 8165952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 36309516 - 36309470
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36309516 caaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 36309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 48077317 - 48077363
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  48077317 caaaatcattttgctgtggaaatggtttctgtgagttgtacaccaaa 48077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 43852156 - 43852201
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||    
T  43852156 aaaatcattttgctgtggaattggtttctgtgagttgtactccaaa 43852201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 25573687 - 25573731
Alignment:
Q  134 aaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  25573687 aaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 25573731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 49137513 - 49137557
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactcc 175  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||    
T  49137513 ccaaaaccattttgttgtggaaatggtttctgtgtgttgtactcc 49137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 16299425 - 16299386
Alignment:
Q  135 aaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  16299425 aaccattttgcagtggaaatggtttctgtgagttgtactc 16299386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 33883426 - 33883473
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  33883426 ccaaaatcattttactgtggaaatggtttatgtgagttgtactccaaa 33883473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 6768503 - 6768457
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  6768503 caaaactattttgctgtgaaaatggtttctatgagttgtactccaaa 6768457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 9551769 - 9551807
Alignment:
Q  197 ccagaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9551769 ccagaatcttcaatctcatcatcaacaccgtcgttcatc 9551807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 9967814 - 9967860
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||    
T  9967814 caaaaccattttactatggaaatggtttctgtgaattgtactccaaa 9967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 20862386 - 20862336
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||  |||||||||||||||| |||| ||||||||||||||||||    
T  20862386 atgccaaaattattttgctgtggaaatagtttatgtgagttgtactccaaa 20862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 24687083 - 24687037
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  24687083 caaaaccattttgctgtggaaatggtttttgtgatttgtacttcaaa 24687037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27872939 - 27872989
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||| ||||    
T  27872939 atgccaaaaccattttgccgtgaaaatagtttctgtgagttgtacttcaaa 27872989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 36621182 - 36621228
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||    
T  36621182 caaaaccattttgctgtggaaatgatttttgtgagttatactccaaa 36621228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 47567996 - 47567950
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||    
T  47567996 caaaaccattttactatggaaatggtttctgtgaattgtactccaaa 47567950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 52325203 - 52325158
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  52325203 caaaaccattttgctgtggaaatggtttctgtga-ttgtacttcaaa 52325158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 16299384 - 16299339
Alignment:
Q  133 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||    
T  16299384 aaaatcattttgatgtggaaatggtttctgtgagttgtacttcaaa 16299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 51836520 - 51836553
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  51836520 gtaccggaatgccaaaaccattttgctgtggaaa 51836553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 638883 - 638848
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  638883 gaatcttcaatctcatcatcaacaccgtcgttcatc 638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 10473537 - 10473502
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  10473537 gaatcttcaatctcatcatcaacaccgtcgttcatc 10473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 50644360 - 50644313
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  50644360 ccaaaaccattttgctgtggaaatgatttatgtgagttacactccaaa 50644313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 51836475 - 51836510
Alignment:
Q  200 gaatcttcaatctcattatcaacaccgtcgttcatc 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  51836475 gaatcttcaatctcatcatcaacaccgtcgttcatc 51836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 177
Target Start/End: Original strand, 9552196 - 9552226
Alignment:
Q  147 gtggaaatggtttctgtgagttgtactccaa 177  Q
    |||||||||||||||||||||||||||||||    
T  9552196 gtggaaatggtttctgtgagttgtactccaa 9552226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 24687126 - 24687080
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  24687126 caaaactattttgcagtggaaatggtttctgtgagttgaacttcaaa 24687080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 30358451 - 30358413
Alignment:
Q  140 ttttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  30358451 ttttgttgtggaaatggtttctgtgtgttgtactccaaa 30358413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 30779646 - 30779696
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||| ||||||||||| ||| ||||||||||| ||||||    
T  30779646 atgccaaaatcattttactgtggaaatgatttatgtgagttgtattccaaa 30779696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 42788619 - 42788665
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||| |||||||||||| ||||||||||| |||||||||| |||||    
T  42788619 caaaatcattttgctgtgaaaatggtttctatgagttgtacaccaaa 42788665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 53526355 - 53526305
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| || ||||  ||||| ||||||||||||||||    
T  53526355 atgccaaaaccattttgctatgaaaataatttctatgagttgtactccaaa 53526305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 53865168 - 53865118
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||||||||||| |  |||||||||  |||||||||||||||||    
T  53865168 atgccaaaaccattttgctataaaaatggttttcgtgagttgtactccaaa 53865118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 562889 - 562926
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtga 165  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  562889 atgcaaaaactattttgctgtggaaatggtttctgtga 562926  T

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Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 638707 - 638674
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  638707 gtaccggaatgccaaaaccattttgatgtggaaa 638674  T

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Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 10473225 - 10473192
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  10473225 gtaccggaatgccaaaaccattttgttgtggaaa 10473192  T

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Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 26577589 - 26577622
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    ||||||||||||||||||||||||| ||||||||    
T  26577589 gtaccggaatgccaaaaccattttgttgtggaaa 26577622  T

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Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 38245624 - 38245591
Alignment:
Q  120 gtaccggaatgccaaaaccattttgctgtggaaa 153  Q
    |||||||||||||||||||||||||| |||||||    
T  38245624 gtaccggaatgccaaaaccattttgccgtggaaa 38245591  T

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Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 4169088 - 4169060
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  4169088 gaaatggtttctgtgagttgtactccaaa 4169060  T

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Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 12722784 - 12722812
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  12722784 gaaatggtttctgtgagttgtactccaaa 12722812  T

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Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 21097802 - 21097774
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  21097802 gaaatggtttctgtgagttgtactccaaa 21097774  T

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Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 22180580 - 22180608
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  22180580 gaaatggtttctgtgagttgtactccaaa 22180608  T

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Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 27764950 - 27764922
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  27764950 gaaatggtttctgtgagttgtactccaaa 27764922  T

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Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 29826066 - 29826094
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  29826066 gaaatggtttctgtgagttgtactccaaa 29826094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 38010575 - 38010547
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  38010575 gaaatggtttctgtgagttgtactccaaa 38010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 50644384 - 50644356
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  50644384 gaaatggtttctgtgagttgtactccaaa 50644356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 53865241 - 53865213
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  53865241 gaaatggtttctgtgagttgtactccaaa 53865213  T

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Target: scaffold0194 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 28489 - 28439
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28489 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 28439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 14442 - 14396
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14442 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 14396  T

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Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 14291 - 14263
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  14291 gaaatggtttctgtgagttgtactccaaa 14263  T

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Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 23673 - 23723
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  23673 atgccaaaattattttgctgtggaaatggtttctgtgagttgtactccaaa 23723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 72617 - 72567
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  72617 atgccaaaaccattttgctgtgcaaatgatttctgtgagttgtactccaaa 72567  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 203132 - 203182
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  203132 atgccaaaactattttgctgtggaaattgtttctgtgagttgtactccaaa 203182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 203288 - 203316
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  203288 gaaatggtttctgtgagttgtactccaaa 203316  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 96103 - 96053
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  96103 atgctaaaaccattttgctgtggaaatggtttctgtgatttgtactccaaa 96053  T

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Target: scaffold0291 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 9650 - 9700
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  9650 atgccaaaactattttgctgtggaaatagtttatgtgagttgtactccaaa 9700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 37737 - 37687
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  37737 atgccaaaatcattttgctgtgaaaatgatttctgtgagttgtactccaaa 37687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 20064 - 20109
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 177  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  20064 caaaaccattttgttgtggaaattgtttctgtgagttgtactccaa 20109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 8003 - 7956
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  8003 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 33720 - 33670
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||| ||||||    
T  33720 atgccaaaatcattttgctgtgaaaatgatttctgtgagttgtattccaaa 33670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 10010 - 9962
Alignment:
Q  130 gccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||| |||||||||||||||||  |||||||||| ||||||    
T  10010 gccaaaaccattgtgctgtggaaatggttttggtgagttgtaatccaaa 9962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 108700 - 108654
Alignment:
Q  132 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||    
T  108700 caaaaccattgtgctgtggagatggttttggtgagttgtactccaaa 108654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 108612 - 108571
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 172  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  108612 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 108571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 80807 - 80853
Alignment:
Q  128 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 174  Q
    |||| ||||||||||| |||| ||||||||||||||||||| |||||    
T  80807 atgcaaaaaccattttactgtagaaatggtttctgtgagttatactc 80853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 120310 - 120351
Alignment:
Q  131 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 172  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  120310 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 120351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 3152 - 3124
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  3152 gaaatggtttctgtgagttgtactccaaa 3124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 1246 - 1218
Alignment:
Q  150 gaaatggtttctgtgagttgtactccaaa 178  Q
    |||||||||||||||||||||||||||||    
T  1246 gaaatggtttctgtgagttgtactccaaa 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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