View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0197AE13 (Length: 240)
Name: NF0197AE13
Description: NF0197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0197AE13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 24865556 - 24865786
Alignment:
| Q |
10 |
tagaaagtgcaaggtggtaatcatgatagaacaaagtcaaaagaaatttccagatcttatggccctatcttgaaagattattcatcttgtgggtgtaata |
109 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
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| T |
24865556 |
tagaaagtgcaaggtggtaatcatgatagaacaaagtcaaaagaaatttccagatcttatgcccctaccttgaaagattattcatcttgtgggtgtaata |
24865655 |
T |
|
| Q |
110 |
aggataggttaatcaatactcacacaatatgcctacattttaaggatagctttttaatgtacttgtgagctcatagtccttgtagtcgagtctaagcatg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24865656 |
aggataggttaatcaatactcacacaatatgcctacattttaaggatagctttttaatgtacttgtgagctcatagtccttgtagtcgagtctaagcatg |
24865755 |
T |
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| Q |
210 |
atttactcttgataatggtttttattctatg |
240 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
24865756 |
atttactcttgataatggtttttattctatg |
24865786 |
T |
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