View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0197AE28 (Length: 264)

Name: NF0197AE28
Description: NF0197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0197AE28
NF0197AE28
[»] chr6 (29 HSPs)
chr6 (5-264)||(11559277-11559536)
chr6 (5-264)||(11533767-11534026)
chr6 (5-264)||(5856756-5857015)
chr6 (5-264)||(16835228-16835484)
chr6 (6-264)||(6406927-6407181)
chr6 (5-264)||(11569757-11570017)
chr6 (5-264)||(20747363-20747622)
chr6 (5-264)||(17963624-17963879)
chr6 (5-264)||(11612969-11613229)
chr6 (30-264)||(14509748-14509982)
chr6 (7-264)||(12405428-12405687)
chr6 (5-264)||(33686709-33686968)
chr6 (5-264)||(17914361-17914622)
chr6 (8-264)||(19994453-19994717)
chr6 (5-198)||(25313539-25313734)
chr6 (5-198)||(26201033-26201228)
chr6 (75-264)||(11428736-11428926)
chr6 (5-202)||(2699181-2699378)
chr6 (84-259)||(4156480-4156655)
chr6 (87-264)||(8748535-8748708)
chr6 (5-264)||(17600147-17600407)
chr6 (5-187)||(22610356-22610541)
chr6 (94-233)||(22694518-22694664)
chr6 (5-93)||(12689911-12689999)
chr6 (5-187)||(19674620-19674803)
chr6 (87-264)||(32530273-32530449)
chr6 (17-82)||(12797864-12797929)
chr6 (5-73)||(22694449-22694517)
chr6 (226-264)||(2699375-2699413)
[»] chr2 (32 HSPs)
chr2 (5-264)||(25477355-25477614)
chr2 (5-264)||(12797700-12797959)
chr2 (5-258)||(25496450-25496703)
chr2 (6-264)||(30651689-30651943)
chr2 (5-264)||(12361023-12361277)
chr2 (5-261)||(9179794-9180044)
chr2 (5-264)||(17974416-17974672)
chr2 (5-264)||(17968029-17968283)
chr2 (5-261)||(9184485-9184735)
chr2 (5-264)||(40846648-40846910)
chr2 (46-264)||(1934098-1934312)
chr2 (5-263)||(18345187-18345446)
chr2 (5-202)||(29678511-29678708)
chr2 (5-154)||(19891573-19891719)
chr2 (5-264)||(24537089-24537342)
chr2 (16-234)||(34495183-34495398)
chr2 (5-207)||(12001965-12002174)
chr2 (5-232)||(25637831-25638058)
chr2 (5-264)||(32080146-32080407)
chr2 (5-197)||(15446348-15446542)
chr2 (5-82)||(19896903-19896978)
chr2 (185-261)||(19891721-19891797)
chr2 (5-96)||(44630514-44630605)
chr2 (19-96)||(42925754-42925831)
chr2 (144-234)||(19896822-19896913)
chr2 (89-158)||(20103259-20103329)
chr2 (8-80)||(31329017-31329089)
chr2 (8-80)||(31335738-31335810)
chr2 (5-187)||(28603933-28604116)
chr2 (7-131)||(7735433-7735557)
chr2 (5-57)||(20101716-20101768)
chr2 (83-233)||(38592040-38592192)
[»] chr1 (23 HSPs)
chr1 (5-264)||(16648696-16648955)
chr1 (5-264)||(19798061-19798320)
chr1 (5-264)||(10136100-10136355)
chr1 (5-264)||(51040587-51040842)
chr1 (6-264)||(25844531-25844785)
chr1 (5-264)||(26926784-26927041)
chr1 (30-264)||(10140868-10141098)
chr1 (5-261)||(11806986-11807249)
chr1 (86-264)||(38621483-38621661)
chr1 (5-264)||(39199833-39200082)
chr1 (59-207)||(33300381-33300529)
chr1 (150-264)||(16834250-16834364)
chr1 (168-264)||(47450448-47450544)
chr1 (5-150)||(12260860-12261006)
chr1 (5-187)||(16036453-16036636)
chr1 (75-261)||(8138396-8138593)
chr1 (5-89)||(38622135-38622219)
chr1 (25-121)||(47450279-47450375)
chr1 (5-96)||(23191903-23191994)
chr1 (155-261)||(20108129-20108238)
chr1 (7-84)||(40166891-40166968)
chr1 (47-96)||(39586186-39586235)
chr1 (59-99)||(46697271-46697311)
[»] chr4 (43 HSPs)
chr4 (5-264)||(16421817-16422076)
chr4 (5-264)||(51698697-51698959)
chr4 (5-262)||(33468068-33468320)
chr4 (5-264)||(13060237-13060496)
chr4 (6-264)||(37263630-37263884)
chr4 (8-264)||(32081234-32081489)
chr4 (6-264)||(37258930-37259184)
chr4 (15-264)||(19907016-19907268)
chr4 (5-264)||(8694488-8694743)
chr4 (5-264)||(31728431-31728686)
chr4 (6-264)||(31274289-31274543)
chr4 (5-264)||(5270488-5270744)
chr4 (5-264)||(31766647-31766902)
chr4 (19-264)||(33462434-33462678)
chr4 (5-264)||(32220630-32220887)
chr4 (5-197)||(55252482-55252674)
chr4 (5-245)||(29349271-29349513)
chr4 (5-252)||(13064876-13065125)
chr4 (85-264)||(5927363-5927538)
chr4 (5-158)||(2820670-2820822)
chr4 (5-219)||(23093925-23094139)
chr4 (5-126)||(12822976-12823097)
chr4 (10-231)||(16948803-16949026)
chr4 (153-264)||(12823099-12823208)
chr4 (74-234)||(39216233-39216394)
chr4 (5-264)||(6943549-6943814)
chr4 (7-189)||(40408782-40408975)
chr4 (5-102)||(19107511-19107608)
chr4 (5-87)||(5925863-5925943)
chr4 (6-148)||(12875290-12875433)
chr4 (5-96)||(19102905-19102996)
chr4 (5-87)||(27183183-27183263)
chr4 (6-83)||(8028215-8028292)
chr4 (7-187)||(47244977-47245158)
chr4 (5-55)||(19907269-19907319)
chr4 (7-96)||(48275906-48275993)
chr4 (52-100)||(39216186-39216234)
chr4 (61-187)||(8029477-8029604)
chr4 (222-264)||(55252441-55252483)
chr4 (8-96)||(29985050-29985139)
chr4 (5-81)||(12878856-12878931)
chr4 (200-258)||(2820585-2820644)
chr4 (168-234)||(16955123-16955190)
[»] chr3 (27 HSPs)
chr3 (5-264)||(20520732-20520991)
chr3 (5-264)||(14437756-14438020)
chr3 (5-264)||(12970874-12971135)
chr3 (6-264)||(7570282-7570535)
chr3 (7-264)||(23665189-23665442)
chr3 (5-264)||(18472781-18473036)
chr3 (5-264)||(23660555-23660810)
chr3 (5-261)||(55326555-55326807)
chr3 (5-264)||(18467987-18468242)
chr3 (5-264)||(27709706-27709959)
chr3 (19-264)||(55432004-55432243)
chr3 (5-254)||(46964794-46965042)
chr3 (5-264)||(757430-757683)
chr3 (5-240)||(39774891-39775122)
chr3 (5-262)||(12964950-12965206)
chr3 (68-264)||(3419764-3419960)
chr3 (104-264)||(32473187-32473344)
chr3 (33-264)||(12111679-12111928)
chr3 (5-187)||(29351074-29351257)
chr3 (5-96)||(3656323-3656414)
chr3 (5-99)||(7860642-7860738)
chr3 (5-57)||(20175371-20175421)
chr3 (5-57)||(3426051-3426103)
chr3 (21-82)||(2206909-2206970)
chr3 (197-245)||(20508416-20508465)
chr3 (7-100)||(12565199-12565296)
chr3 (7-100)||(13259598-13259695)
[»] chr8 (32 HSPs)
chr8 (7-264)||(1808222-1808479)
chr8 (6-264)||(40124961-40125215)
chr8 (5-262)||(38181348-38181605)
chr8 (5-264)||(18875451-18875709)
chr8 (5-264)||(33417305-33417560)
chr8 (5-264)||(1910013-1910273)
chr8 (46-264)||(17026916-17027130)
chr8 (46-264)||(17557408-17557622)
chr8 (7-245)||(2966373-2966613)
chr8 (5-264)||(44924987-44925235)
chr8 (5-202)||(15950638-15950838)
chr8 (5-182)||(26779957-26780134)
chr8 (35-259)||(23547700-23547931)
chr8 (88-238)||(19168560-19168712)
chr8 (5-102)||(28559182-28559279)
chr8 (140-264)||(17021127-17021250)
chr8 (140-264)||(17551564-17551687)
chr8 (120-264)||(17026694-17026833)
chr8 (120-264)||(17557186-17557325)
chr8 (5-102)||(28564361-28564458)
chr8 (50-234)||(22714109-22714294)
chr8 (7-262)||(24672387-24672645)
chr8 (78-234)||(33100199-33100356)
chr8 (5-44)||(17021247-17021286)
chr8 (5-44)||(17551684-17551723)
chr8 (5-84)||(7002594-7002675)
chr8 (9-187)||(17953216-17953390)
chr8 (5-82)||(33100541-33100617)
chr8 (226-264)||(15950835-15950873)
chr8 (9-63)||(31440200-31440254)
chr8 (226-259)||(19167428-19167461)
chr8 (204-264)||(26779899-26779962)
[»] chr5 (30 HSPs)
chr5 (5-264)||(6154498-6154754)
chr5 (5-264)||(20180219-20180475)
chr5 (5-264)||(26668053-26668308)
chr5 (5-264)||(26939650-26939905)
chr5 (6-264)||(37247866-37248121)
chr5 (5-264)||(37537002-37537259)
chr5 (5-264)||(37646121-37646378)
chr5 (5-264)||(7452528-7452785)
chr5 (5-264)||(29167039-29167294)
chr5 (5-264)||(36424413-36424668)
chr5 (5-211)||(12103878-12104084)
chr5 (50-264)||(6511740-6511957)
chr5 (36-264)||(39519170-39519394)
chr5 (36-264)||(39523809-39524033)
chr5 (5-264)||(36430294-36430548)
chr5 (5-109)||(10759427-10759531)
chr5 (5-264)||(16115295-16115553)
chr5 (132-261)||(40148674-40148798)
chr5 (5-207)||(23688895-23689101)
chr5 (5-122)||(17162769-17162887)
chr5 (5-81)||(40148797-40148873)
chr5 (5-99)||(17159312-17159407)
chr5 (5-187)||(35678964-35679147)
chr5 (5-62)||(6511669-6511726)
chr5 (7-91)||(40567670-40567754)
chr5 (59-205)||(22832639-22832786)
chr5 (199-264)||(12103801-12103866)
chr5 (7-99)||(15149601-15149692)
chr5 (7-187)||(4872734-4872910)
chr5 (108-187)||(15413861-15413940)
[»] chr7 (33 HSPs)
chr7 (5-264)||(42625644-42625908)
chr7 (5-264)||(26341982-26342237)
chr7 (20-264)||(12800161-12800405)
chr7 (5-264)||(3880739-3881001)
chr7 (6-264)||(4930998-4931252)
chr7 (5-244)||(12256812-12257052)
chr7 (23-264)||(8269071-8269312)
chr7 (5-261)||(3046346-3046604)
chr7 (5-264)||(10392155-10392416)
chr7 (5-264)||(12181818-12182088)
chr7 (5-264)||(21671969-21672235)
chr7 (7-261)||(10387417-10387674)
chr7 (76-264)||(27238926-27239114)
chr7 (83-264)||(2595598-2595778)
chr7 (5-264)||(27246614-27246873)
chr7 (25-232)||(6590099-6590307)
chr7 (2-264)||(9814938-9815206)
chr7 (2-264)||(10716863-10717131)
chr7 (76-217)||(23247877-23248018)
chr7 (19-135)||(16373248-16373364)
chr7 (48-179)||(23152177-23152308)
chr7 (74-164)||(44509585-44509674)
chr7 (5-99)||(13313380-13313474)
chr7 (5-96)||(26286224-26286315)
chr7 (8-82)||(23247627-23247701)
chr7 (5-238)||(15973519-15973753)
chr7 (7-102)||(4580398-4580493)
chr7 (83-264)||(23319693-23319870)
chr7 (186-264)||(16373166-16373246)
chr7 (7-43)||(44508364-44508400)
chr7 (37-82)||(44508427-44508472)
chr7 (6-43)||(23151753-23151792)
chr7 (5-57)||(30259240-30259292)
[»] scaffold0054 (2 HSPs)
scaffold0054 (5-264)||(29950-30207)
scaffold0054 (5-187)||(26288-26471)
[»] scaffold0002 (2 HSPs)
scaffold0002 (6-264)||(4839-5093)
scaffold0002 (5-264)||(443005-443263)
[»] scaffold0352 (1 HSPs)
scaffold0352 (5-262)||(7885-8139)
[»] scaffold0057 (1 HSPs)
scaffold0057 (5-264)||(35899-36152)
[»] scaffold0690 (1 HSPs)
scaffold0690 (5-264)||(6001-6262)
[»] scaffold0240 (1 HSPs)
scaffold0240 (19-264)||(4748-4988)
[»] scaffold0595 (1 HSPs)
scaffold0595 (40-84)||(3904-3948)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-41)||(64960-64996)


Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 11559277 - 11559536
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |    
11559277 acataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataattgtaattattatttttattcg 11559376  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
11559377 agaatatcactttccataaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 11559476  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
11559477 ttcctccacttgtgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 11559536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 11533767 - 11534026
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |    
11533767 acataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataattgtaattattatttttattcg 11533866  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
11533867 agaatatcactttccataaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttacttcattcaaatccaatagtttgt 11533966  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
11533967 ttcctccacttgtgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 11534026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 5857015 - 5856756
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |    
5857015 acataaactagaacatacacattagtagtgtttaaattgcggtatttaattttaaataattgataatgataaaaataatagtaattgttatttttattcg 5856916  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
5856915 agaatatcacttcccaaaaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 5856816  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
5856815 ttcctccacttttgtggatttgtttcttttgatcatatccataagtgttgttgatctgat 5856756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 16835228 - 16835484
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
16835228 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttatttg 16835327  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
16835328 agaatatcactttccataaatttagtttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 16835424  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
16835425 tacctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 16835484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 6406927 - 6407181
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||    
6406927 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcga 6407025  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| |||||||||||||||    
6407026 gaatatcattttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgtt 6407122  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
6407123 tcctccatttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 6407181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 11569757 - 11570017
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
11569757 acataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 11569856  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatag-tttg 203  Q
    ||||||||| | ||||||||||||||||||||| |||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
11569857 agaatatcactgtccataaatttagcttatggtcgttgtgaaaagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagttttg 11569956  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||  |||||||||||||||||||||||||| | |||| |||||||||||||    
11569957 tttcctccacttgggtggatttgtttcttttgatcctatctacaagtattgttgaactgat 11570017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 20747363 - 20747622
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| |    
20747363 acataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacgataaaaacaatagtaattattatttttattcg 20747462  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
     |||||||| || ||||||||||||| |||||| |||| | |||||| ||| |||||||| |||||||||||||||||||||||| || |||||||||||    
20747463 tgaatatcacttcccataaatttagcatatggttgttgtggtaagaacaaggatttaattgaatttcttatatttccttcattcaaattcaatagtttgt 20747562  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
20747563 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 20747622  T

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Target: chr6; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 17963624 - 17963879
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| |    
17963624 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattgtta-ttttattcg 17963722  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||| |||||||||||||||||| ||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
17963723 agaatatcacttttcataaatttagcttatggcggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 17963819  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
17963820 ttcctccactattgtggatttgtttcttttaatcctatccacaagtgttgttgaactgat 17963879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 11612969 - 11613229
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaatt-attatttttattt 103  Q
    |||||||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||     
11612969 acataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatgataaaaataatagtgattaattaattttattc 11613068  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agttt 202  Q
    | |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||||||||| |||| |||||||| || |||| |||||    
11613069 gtgaatatcattttccataaatttagcttatggt-gttgtgataagaataagaattcaattgaatttcttatctttcattcattcaaattcaatgagttt 11613167  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
11613168 gtttcctccacttttgtggatttatttcttttgatcctatccacaagtgttgttgaactgat 11613229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 30 - 264
Target Start/End: Complemental strand, 14509982 - 14509748
Alignment:
30 tagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttag 129  Q
    ||||||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||||    
14509982 tagtgtttaaattgtggtatttaattttaaatacttaataataataaaaataatagtaattattttttttatttgagaatatcacttctcataaatttag 14509883  T
130 cttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgttt 229  Q
     ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
14509882 tttatggtggttgcgataagaataggaatttaattaaatttcttatatttccatcattcaaatctaatagtttgtttcctccacttttgtggatttgttt 14509783  T
230 cttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| |||||||||| ||||||||||||||||||    
14509782 ctttttatcctatccacaagtgttgttgaactgat 14509748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 12405428 - 12405687
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgag 106  Q
    |||||||||||||||||||||||||||| ||||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | |    
12405428 ataaaatagaacacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatgataaaaataatagtaattattatttttattcgtg 12405527  T
107 aatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtt 205  Q
    ||||||| || ||||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||| ||||| ||||||| ||||||| ||||||||    
12405528 aatatcacttcccataaatttagcttatggtgattgtgataagaataagaattcaattgaatttcttatctttccatcattcaaatccaatgagtttgtt 12405627  T
206 tcctccacttttgtgga-tttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| ||||||||| ||| |||||||| ||||||||   ||||||||||||||||||    
12405628 tcctccatttttgtggattttttttcttttaatcctatctgcaagtgttgttgaactgat 12405687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 33686709 - 33686968
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||| |||  ||| |||||||||||||||| ||  ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||      
33686709 acataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatgataaaaataatagtaattattatttttattca 33686808  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    | ||||||| ||||||||||||||| ||| |||| ||| ||||||||||| |||| |||| ||||||||||||||| |||||||| ||| ||||||||||    
33686809 ataatatcactttccataaatttagtttagggtgattgtgataagaataataattaaattgaatttcttatatttcattcattcaaatctaatagtttgt 33686908  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||| |||||||||||||| |||||| || |||||| ||||||||    
33686909 ttcctccacttttgtggatctgtttcttttgatcatatccacaactgttgtcgaactgat 33686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 17914622 - 17914361
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||| |||||||||||||| |||||||| |||| | |||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||||||    
17914622 acataaaatggaacacacacattaatagtgttttaattacggtatttaattttaaatacctgatgatgataaaaataatagcaattattatttttatttg 17914523  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     |||||||| || |||||||||||| |||||||||||| |||||||||||||||| |||| |||||| ||| ||||||||||||| ||| ||| ||||||    
17914522 tgaatatcacttcccataaatttaggttatggtggttgtgataagaataagaattcaattcaatttcatatctttccttcattcaaatctaatgagtttg 17914423  T
204 tttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
     ||||| ||||||||||||||| |||| |||||||  |||||| ||||||||||||||||||    
17914422 attccttcacttttgtggatttatttctttttgatattatccacaagtgttgttgaactgat 17914361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 19994453 - 19994717
Alignment:
8 taaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgaga 107  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| | ||    
19994453 taaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatgataaaaataatagtaattattatttttattcgtga 19994552  T
108 atatcattttccataaatttagcttatggtggttgcg------ataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agt 200  Q
    |||||| || ||| | ||||||||||| ||||||| |      ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||    
19994553 atatcacttgccaaacatttagcttatagtggttgtgataagaataagaataagaattcaattaaatttcttatatttccttcattcaaatccaatgagt 19994652  T
201 ttgtttcctccacttttgtggatttgt-ttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||   |||||||||||| | |  |||||||| ||||||  | |||||||||||||||    
19994653 ttgtttcctcatattttgtggatttctgtgtttttgatcttatccaccaatgttgttgaactgat 19994717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 25313539 - 25313734
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaa--ataatagtaattattatttttatt 102  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
25313539 acataaaatagaacacatatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaaaataatagtaattattatttttatt 25313638  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaata 198  Q
     |||||||||| || | |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||    
25313639 cgagaatatcacttcctataaatttagcttatgatagttgtgataagaataagaatttaattgaatttcttatattttcttcattctaatccaata 25313734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 26201033 - 26201228
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaa--ataatagtaattattatttttatt 102  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
26201033 acataaaatagaacacatatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaaaataatagtaattattatttttatt 26201132  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaata 198  Q
     |||||||||| || | |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||    
26201133 cgagaatatcacttcctataaatttagcttatgatagttgtgataagaataagaatttaattgaatttcttatattttcttcattctaatccaata 26201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 75 - 264
Target Start/End: Complemental strand, 11428926 - 11428736
Alignment:
75 aaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttctta 174  Q
    ||||||||||| |||||||||||||||| | |||||||| || |||||||||||||||||| |||||| ||||| |||| ||||| |||| |||||||||    
11428926 aaaaataatagaaattattatttttattcgtgaatatcacttcccataaatttagcttatgttggttgtgataaaaatatgaattcaattgaatttctta 11428827  T
175 tatttccttcattc-agatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
11428826 tatttccttcattcaaaatcaaataatttgtttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 11428736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 2699181 - 2699378
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||| |    
2699181 acataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataataaaaataatagtaattattatttttattcg 2699280  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
    ||||||||| || |||||||||||||||||  | ||||  |||||||||||||||||||| |||||||||||||| ||||||||  ||| ||||||||    
2699281 agaatatcacttcccataaatttagcttataatagttgtaataagaataagaatttaattgaatttcttatattttcttcattccaatcaaatagttt 2699378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 84 - 259
Target Start/End: Original strand, 4156480 - 4156655
Alignment:
84 agtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttcctt 183  Q
    ||||||||||||||||||| |||||||||| || | |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
4156480 agtaattattatttttattcgagaatatcacttccgataaatttagcttatggtggttgtaataagaataagaatttaattaaatttcttatatttcctt 4156579  T
184 cattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaa 259  Q
     ||||| |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| |||||||||||||    
4156580 tattcaaatccaatagtttgtttcctccatttttgtggatttgtttattttgagtctatccacaagtgttgttgaa 4156655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 264
Target Start/End: Complemental strand, 8748708 - 8748535
Alignment:
87 aattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcat 186  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||    
8748708 aattattatttt-atttgagaatatcatttttcataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcat 8748613  T
187 tcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
8748612 tcaaattcaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccacaattgttgttgaactgat 8748535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 17600407 - 17600147
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||| ||||||||   ||||||||||  |||||||||||| |||| ||||||||||||||||||| |||| |  |||||||| || |    
17600407 acataaaatagaacacaaacattagt---gtttaaattgtggtatttaattttaaataattgataatgataaaaataacagtagtagttattttttttag 17600311  T
105 --agaatatcattttccataaatttagcttatggtg---gttgcga---taagaataagaatttaatttaatttcttatatttccttcattcagatccaa 196  Q
       |||||||| || |||||||||||||||||||||   |||| ||   | |  ||||||||| || | |||||  ||| ||||||||||||| ||||||    
17600310 catgaatatcacttcccataaatttagcttatggtggttgttgtgaatcttatgataagaattcaactgaattttctatctttccttcattcatatccaa 17600211  T
197 t-agtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    | | |||||||||| ||      ||||||||||||||||||||||||||| ||||||||||||||||||    
17600210 taaatttgtttccttca-----atggatttgtttcttttgatcctatccacaagtgttgttgaactgat 17600147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 22610541 - 22610356
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattattt-ttatt- 102  Q
    |||||||||| |||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |     
22610541 acataaaataaaacacacacattagtagtgtttaaattttggtatttaattttaaatacttgataatgataaaaataattgtaattattatttattactc 22610442  T
103 -tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
     |||  |||||| |  |||||| ||||| ||||| ||||||| |||||| | ||||| ||| | |||||  ||| |||||||||||    
22610441 atgaatatatcactacccataattttagtttatgttggttgcaataagattgagaatctaactgaattttctatctttccttcatt 22610356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 22694518 - 22694664
Alignment:
94 atttttatttgagaatatcattttccataaatttagcttatggtggttgcgataa------gaataagaatttaatttaatttcttatatttccttcatt 187  Q
    ||||||||| | |||||||| || ||||| |||||||||||| |||||| |||||      ||||||||||| |||| |||||||||| |||||||||||    
22694518 atttttattcgtgaatatcacttaccatatatttagcttatgatggttgtgataagaataagaataagaattcaattgaatttcttatttttccttcatt 22694617  T
188 cagatccaat-agtttgtttcctccacttttgtggatttgtttcttt 233  Q
    || ||||||| |||||||||||||||||||||| |||||||||||||    
22694618 caaatccaatgagtttgtttcctccacttttgtagatttgtttcttt 22694664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 12689999 - 12689911
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattatt 93  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||  ||||| |||| ||||||||| ||||||||    
12689999 acataaaatagaacacacacattagtagtgtttaaatagcggtatttaattttaaataactgatattgatgaaaataataataattatt 12689911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 19674803 - 19674620
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt-tttattt 103  Q
    |||||||||||||||||||||| ||||||||||||||     ||||||||||| ||||| | |||||||| |||||||||   ||||||||| ||||||     
19674803 acataaaatagaacacacacatcagtagtgtttaaataatgatatttaattttaaatacctaataatgatgaaaataataaatattattattctttattc 19674704  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
      | |||||| || |||||| ||||| ||||| | |||  ||||||| | |||||  || | |||||| ||| |||||||||||    
19674703 atggatatcacttcccataattttaggttatgtttgttttgataagattgagaatccaactgaatttcctatctttccttcatt 19674620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 32530273 - 32530449
Alignment:
87 aattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcat 186  Q
    |||| ||||||||||||  |||||||| || |||||||||||| |||   |||||  | |||||||||||||  |||| |||||| |||||||| || ||    
32530273 aattgttatttttatttt-gaatatcacttcccataaatttagattacattggttctgctaagaataagaataaaattgaatttcctatatttcatttat 32530371  T
187 tcagatccaatagtttgtttcctccacttttgtggatttgtttct-tttgatcctatccataagtgttgttgaactgat 264  Q
    |||||| |||||  |||||| ||||| |||||| | ||| ||||| ||||||| |||||| ||   |||||||||||||    
32530372 tcagatacaataaattgttttctcca-ttttgtaggtttatttctctttgatcttatccacaaacattgttgaactgat 32530449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 12797864 - 12797929
Alignment:
17 acacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataa 82  Q
    ||||||||| ||||||||||||||| |  |||||||||||| ||||||||| || |||||||||||    
12797864 acacacacactagtagtgtttaaatagtggtatttaattttaaatacttgacaacgataaaaataa 12797929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22694449 - 22694517
Alignment:
5 acataaaatagaacacacacat-tagtagtgtttaaattgcagtatttaattttgaatacttgataatga 73  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||| | || ||||||||||||    
22694449 acataaaatagaacacacacatctag-agtgtttaaattgccgtatttaattataaaaacttgataatga 22694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 2699375 - 2699413
Alignment:
226 gtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||| |||||||||| ||||||||||||||||||    
2699375 gtttcttttaatcctatccacaagtgttgttgaactgat 2699413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 25477355 - 25477614
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
25477355 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 25477454  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
25477455 agaatatcactttctataaatttagcttatggtggttgcgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 25477554  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
25477555 ttcctctacttgtgtggatttgtttcttttgatcctatctacaagtgttgttgaactgat 25477614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 12797959 - 12797700
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
12797959 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 12797860  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || | ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
12797859 agaatatcacttcctataaatttaccttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 12797760  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
12797759 ttcctccgcttttgtggatttgtttcttttgatcatatccacaagtgttgttgaaatgat 12797700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 25496450 - 25496703
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
25496450 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 25496549  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
25496550 agaatatcactttctataaatttaacttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 25496649  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttga 258  Q
    |||||| |||| ||||||||||||||||||||||||||| | ||||||||||||    
25496650 ttcctcgacttgtgtggatttgtttcttttgatcctatctacaagtgttgttga 25496703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 30651943 - 30651689
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||    
30651943 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attcga 30651845  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| |||||||||||||||    
30651844 gaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgtt 30651748  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
30651747 tcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 30651689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 12361277 - 12361023
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||| |||||  ||||||||||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||   |||||| |    
12361277 acataaaatagaagacaca--ttagtagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataatagtaattatt---tttattcg 12361183  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
12361182 agagtatcactttccataaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 12361083  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
12361082 ttcctccacttttgtggatttgtttcttttgatcctatcaacaagtgttgttgaactgat 12361023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 5 - 261
Target Start/End: Original strand, 9179794 - 9180044
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| |    
9179794 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattta-aatacttgataatgataaaaataatagtaattattatttt-attcg 9179891  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
9179892 agaatatcactttcgataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 9179988  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaact 261  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
9179989 ttcctcca-ttttgtggatttgtttcttttgatcctatccacaagtgttgttgaact 9180044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 17974416 - 17974672
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatactt-gataatgataaaaataatagtaattattatttttattt 103  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||     
17974416 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataattgtaattattatttt-attc 17974514  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||    || |||||||||||||||||| | |||||||||||    
17974515 gagaatatcactttccataaatttagcttatggtagttgtgataagaataataatttaatta---ttattatatttccttcattcaaaaccaatagtttg 17974611  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
17974612 tttcctccacttttgtgaatttgtttcttttgatcctatccacaagtgttgttgaactgat 17974672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 17968029 - 17968283
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatactt-gataatgataaaaataatagtaattattatttttattt 103  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
17968029 acataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataatagtaattattatttt-attt 17968127  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
    |||||||||| |  ||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| |||||||||||||    
17968128 gagaatatcaat--ccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatattttcttcattcaaatccaatagtttg 17968222  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
17968223 tttcctccacttttgtggatttgttccttttgatcctatccacaagtgttgttgaactgat 17968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 261
Target Start/End: Original strand, 9184485 - 9184735
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| |    
9184485 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattta-aatacttgataatgataaaaataatagtaattattatttt-attcg 9184582  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
9184583 agaataccactttcgataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 9184679  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaact 261  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
9184680 ttcctcca-ttttgtggatttgtttcttttgatcctatccacaagtgttgttgaact 9184735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 40846648 - 40846910
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
40846648 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataataataaaaataatagtaatttttatttttatttg 40846747  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     |||||||| || | |||||||||| ||||| |||||| |||||||||||||||| |||| |||||||||| ||||||||||||| ||  ||| ||||||    
40846748 tgaatatcacttcctataaatttagtttatgatggttgtgataagaataagaattcaattgaatttcttatctttccttcattcaaatttaatgagtttg 40846847  T
204 tttcctccacttttgtggatttgtttc--ttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||  |||| ||| |||||| ||||||||||||||||||    
40846848 tttcctccacttttgtggatttgtttctttttttatcttatccacaagtgttgttgaactgat 40846910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 46 - 264
Target Start/End: Original strand, 1934098 - 1934312
Alignment:
46 gtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcga 145  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| ||    
1934098 gtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attagagaatatcactttccataaatttagcttatggtggttgtga 1934196  T
146 taagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatcca 245  Q
    ||||||||| |||||||||    || |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
1934197 taagaataataatttaatta---ttattatattttcttcattcaaatccaatagtttggttcctccacttttgtggatttgtttcttttgatcctatcca 1934293  T
246 taagtgttgttgaactgat 264  Q
    |||||||||||||||||||    
1934294 taagtgttgttgaactgat 1934312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 5 - 263
Target Start/End: Complemental strand, 18345446 - 18345187
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaa---------taatagtaattattat 95  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||         ||||||||||||||||    
18345446 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatgataaaaaaaaaaaaaataatagtaattattat 18345347  T
96 ttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatcca 195  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| |||||    
18345346 ttt-atttgagaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatcca 18345251  T
196 atagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactga 263  Q
    |||||||||||||||||||    |||||||||||||||||||||||| || |||||||||||||||||    
18345250 atagtttgtttcctccact----tggatttgtttcttttgatcctattcacaagtgttgttgaactga 18345187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 29678708 - 29678511
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |    
29678708 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagtaattattatttttattcg 29678609  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
    | ||||||| || |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||    
29678608 aaaatatcacttcccataaatttagcttacggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaactctaatagttt 29678511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 19891573 - 19891719
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||  ||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |    
19891573 acataaaatagaacacaca--ttattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcg 19891669  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataa 154  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||||||    
19891670 agaatatcactttccataaatttagcttatggtggttctgataagaataa 19891719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 24537089 - 24537342
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||| |||||| |||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
24537089 acataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 24537188  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaat------ttaatttaatttcttatatttccttcattcaga-tccaat 197  Q
     ||||||||||| ||||| ||||| ||| | ||||||| |||||||||| ||||      | |||| |||||||||| ||||||||||||| | ||||||    
24537189 tgaatatcatttcccatacatttaacttctagtggttgtgataagaatatgaataagatttcaattgaatttcttatctttccttcattcaaaatccaat 24537288  T
198 agtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
                  |||||||||||||||||||| ||||||||||| | ||||||| ||||||||||    
24537289 g-------------acttttgtggatttgtttctcttgatcctatctacaagtgtttttgaactgat 24537342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 34495183 - 34495398
Alignment:
16 aacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcatt 115  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    || | | |||||| |    
34495183 aacacacatattattagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagtcattattatt----ttagtggatatcact 34495278  T
116 ttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtttcctccact 214  Q
    || || |||||||  ||||| ||| || ||||||||||||||||||| | ||||||| || ||||||||||||| || |||| | ||||||| |||||||    
34495279 tttcaaaaatttaatttatgttggctgtgataagaataagaatttaactgaatttctcatctttccttcattcatattcaataaatttgtttgctccact 34495378  T
215 tttgtggatttgtttctttt 234  Q
    ||||| ||||||||| ||||    
34495379 tttgtagatttgtttatttt 34495398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 12001965 - 12002174
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttg------ataatgataaaaataatagtaattattatttt 98  Q
    |||||||||| || ||||||||||||||||||| ||||||  ||||||||||| |||| |||      ||||||||||||||||||||||||||||||||    
12001965 acataaaataaaatacacacattagtagtgtttgaattgcgatatttaatttttaatatttgtaattgataatgataaaaataatagtaattattatttt 12002064  T
99 tatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat- 197  Q
    |||| | | |||||| || ||||||||||| |||||| || ||| |||||||||||||||| ||   |||||  ||| ||||||||||| | |||||||     
12002065 tattcgtggatatcacttcccataaatttaacttatgttgattgtgataagaataagaattcaaccgaattttctatctttccttcatttacatccaatg 12002164  T
198 agtttgtttc 207  Q
    ||||||||||    
12002165 agtttgtttc 12002174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 25637831 - 25638058
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttatt- 102  Q
    |||||||||||||||||||  ||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||     
25637831 acataaaatagaacacaca--ttagtagtgtttaaactgcggtatttaatttttaaatacttgataatgataaaaataatagtaattattatttttattc 25637928  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttct-tatatttccttcattcagatccaa-tagt 200  Q
    | || |||||| ||  ||||||||||| ||| | | |||| ||||||||||| |||| ||  ||| |||| ||| |||||||| |||| ||||||  |||    
25637929 ttaggatatcacttctcataaatttagttta-gttagttgtgataagaataaaaattcaa-ctaagttctctatctttccttcgttcatatccaacaagt 25638026  T
201 ttgtttcctccacttttgtggatttgtttctt 232  Q
    ||||||||| ||||| ||| | ||||||||||    
25638027 ttgtttccttcacttatgttgttttgtttctt 25638058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 32080407 - 32080146
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttattt 103  Q
    ||||||||||||||||||| |||| |||| |||| |||    ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||     
32080407 acataaaatagaacacacatattaatagtatttatattatgatatttaatttttaagtacctgataatgataaaaataatagtaattattttttttattc 32080308  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaa-tagttt 202  Q
     || ||| || ||||||||| ||| ||||| | |||||| ||||||| | |||||  | || | |||||||| | || |||||||| |||||| | ||||    
32080307 aagcataccactttccataatttttgcttacgttggttgtgataagattgagaatccatttgattttcttatctctcattcattcatatccaatttgttt 32080208  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| ||| ||||||||| ||||||| ||||  || |||||| ||| ||  ||||||||||    
32080207 gtttcttccccttttgtgggtttgtttatttttgtcatatccacaagagtccttgaactgat 32080146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 15446348 - 15446542
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttattt 103  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||||||| || |||||||||||| ||||| || || ||||||||||||||  ||    
15446348 acataaaatagaacacatacattagtagtgtttaaattgtggtatttaatttttaaatacttgataatggtaaaagtagtaataattattattttttatt 15446447  T
104 ga-gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat 197  Q
     | | |||||| ||  ||||| |||||||||||  ||| | ||||||| | |||||  || | | ||||||||  |||||||||||| |||||||    
15446448 catggatatcacttcacataattttagcttatgtaggtcgtgataagattgagaatcgaactgagtttcttatcgttccttcattcatatccaat 15446542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 19896978 - 19896903
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataa 82  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
19896978 acataaaatagaacacaca--ttagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataa 19896903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 19891721 - 19891797
Alignment:
185 attcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaact 261  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||    
19891721 attcaaatcaaatagtttgtttcctccacttttgtagatttgtttcttttgattttatccacaagtgttgttgaact 19891797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 44630514 - 44630605
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||||||||||||||||||||| ||||||||| |  || ||||||||| ||||| |||||||||||| ||||||  | |||||||||    
44630514 acataaaatagaacacacacattagtattgtttaaatagtggtgtttaattttaaatacctgataatgataataataattattattattatt 44630605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 42925754 - 42925831
Alignment:
19 acacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||||||||||||||||| |   ||||||||||| ||||| |||||||||| ||||||||| |||||||||||    
42925754 acacacattagtagtgtttaaatagtgatatttaattttaaatacctgataatgatgaaaataataataattattatt 42925831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 19896913 - 19896822
Alignment:
144 gataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttctttt 234  Q
    ||||| ||||| |||| |||| ||||||||||||||| |||||||| || |||| |||||||||||| |||||||||||||| |||| ||||    
19896913 gataaaaataaaaattcaattgaatttcttatatttcattcattcaaattcaatgagtttgtttccttcacttttgtggattcgtttttttt 19896822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 20103259 - 20103329
Alignment:
89 ttattatttttatttgagaatatcattttccataaatttagcttatggtgg-ttgcgataagaataagaat 158  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
20103259 ttattatttttagtggtgaatatcactttccataaatttagcttatggtggtttgtgataagaataagaat 20103329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 31329089 - 31329017
Alignment:
8 taaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaat 80  Q
    |||||||||||| |||| |||||||||||||||| |  |||||||||||| ||||| |||||||||| |||||    
31329089 taaaatagaacaaacacgttagtagtgtttaaatagtggtatttaattttaaatacatgataatgatgaaaat 31329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 31335810 - 31335738
Alignment:
8 taaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaat 80  Q
    |||||||||||| |||| |||||||||||||||| |  |||||||||||| ||||| |||||||||| |||||    
31335810 taaaatagaacaaacacgttagtagtgtttaaatagtggtatttaattttaaatacatgataatgatgaaaat 31335738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 28604116 - 28603933
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattatta-tttttattt 103  Q
    ||||||||||||  ||||| ||||  ||||||||||| |   ||||||||||| ||||| |||||||||| ||||||||| |||| |||| ||||||||     
28604116 acataaaatagattacacagattatcagtgtttaaatagtgatatttaattttaaatacatgataatgatgaaaataataataataattattttttattc 28604017  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
      | |||||| || |||||| ||||| ||||| | |||  ||||||| | |||||  || | |||||| ||| |||||||||||    
28604016 atggatatcacttcccataattttaggttatgttcgttatgataagattgagaatccaactgaatttcctatctttccttcatt 28603933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 7735557 - 7735433
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    |||||||| |||||| | |||||||||||||| |||    ||||||||||| || |||  |||||| |||||||||||||||| |||| |||||||| |     
7735557 ataaaatataacacatatattagtagtgtttatattatgatatttaattttcaagtacccgataataataaaaataatagtaa-tattttttttattcgt 7735459  T
106 gaatatcattttccataaatttagct 131  Q
    | |||||| ||||||||| |||||||    
7735458 gcatatcagtttccataattttagct 7735433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 20101716 - 20101768
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaatttt 57  Q
    ||||||||||||||| ||||||||||||| |||||||| | ||||||||||||    
20101716 acataaaatagaacatacacattagtagtatttaaattactgtatttaatttt 20101768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 38592192 - 38592040
Alignment:
83 tagtaattattattttt-atttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttcc 181  Q
    |||||||||| |||||| |||  || |||||  ||||||||| |||| |||||| || ||| ||||||| | || || ||||| | | || |||||||||    
38592192 tagtaattatcattttttattcaagcatatcgctttccataattttaacttatgttgattgtgataagattgagtatctaattgagtatcctatatttcc 38592093  T
182 ttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttcttt 233  Q
    | |||||| || || | ||||||||||||||| ||||  ||||| ||||||||    
38592092 tccattcatattcatttagtttgtttcctccatttttacggattagtttcttt 38592040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 16648696 - 16648955
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
16648696 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 16648795  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    | ||||||| |||||||||||||| |||| |||||||| ||||||||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||    
16648796 ataatatcactttccataaatttaacttacggtggttgtgataagaataaaaatttaactaaatttcttatatttccttcattcaaatccaatagtttgt 16648895  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
16648896 ttcctccacttttgtggatttgtttcttttgatcctattcacaagtgttgttgaactgat 16648955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 19798061 - 19798320
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||| | || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
19798061 acataaaatagaactcgcatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaataattatttttatttg 19798160  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||    
19798161 agaatatcacttcccataaatttagcttatggtggttgtgataagaataagaatttaatttaatttcttatatttccttcattcaaatctaatattttgt 19798260  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||    
19798261 ttcctctacttttgtggatttgtttcttttgatcctattcacatgtgttgttgaactgat 19798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 10136355 - 10136100
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |    
10136355 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcg 10136257  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
10136256 agaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgt 10136160  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
10136159 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 10136100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 51040587 - 51040842
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||| ||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |    
51040587 acatgaaatagaacacacacattagtagtgtttaaattgtgttatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcg 51040685  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| ||||||||||||||    
51040686 agaatatcattttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatattttcttcattcaaatccaatagtttgt 51040782  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
51040783 ttcctccacttttgtggatttgtttcatttgatcttatccacaagtgttgttgaactgat 51040842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 25844785 - 25844531
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||    
25844785 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattatta-ttttattaga 25844687  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| ||||||||||||| |    
25844686 gaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatattttcttcattcaaatccaatagtttggt 25844590  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
25844589 tcctccacttttgtggatttgtttcctttgatcctatccacaagtgttgttgaactgat 25844531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 26926784 - 26927041
Alignment:
5 acataaaatagaacacacacattagtagtgttt-aaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttatt 102  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||| |||    
26926784 acataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatgataaaaataatagtaattattatttt-att 26926882  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
     ||| |||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||    
26926883 cgagcatatcacttttcataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagttt 26926979  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
26926980 gtttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 26927041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 30 - 264
Target Start/End: Complemental strand, 10141098 - 10140868
Alignment:
30 tagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttag 129  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||    
10141098 tagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcgagaatatcacttcccataaatttag 10141000  T
130 cttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgttt 229  Q
     ||||||| |||| ||||||||||| |||||||||    || ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
10140999 tttatggtagttgtgataagaataataatttaatta---ttattatatttccttcattcaagtccaatagtttgttacctccacttttgtggatttgttt 10140903  T
230 cttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||| |||||| ||||||| ||||||||||    
10140902 cttttgatcatatccacaagtgttattgaactgat 10140868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 11807249 - 11806986
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||||      
11807249 acataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttgataatgataaaaacaatattaattattatttttattcc 11807150  T
105 agaatatcattttccataaatttagcttatggtggttgcgataaga------ataagaatttaatttaatttcttatatttccttcattcagatccaat- 197  Q
     ||||||||||| ||||||||||||||||||||||||| |||||||      ||||||||| |||| || ||||||| |||| |||||||| |||||||     
11807149 ggaatatcatttcccataaatttagcttatggtggttgtgataagaataaaaataagaattcaattgaa-ttcttatctttctttcattcaaatccaatg 11807051  T
198 agtttgtttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaact 261  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||| ||| ||||| |||||    
11807050 agtttgtttcatccacttttgtggatttgtttctttttgatcttatccacaagcgttgtcgaact 11806986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 86 - 264
Target Start/End: Complemental strand, 38621661 - 38621483
Alignment:
86 taattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttca 185  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||| || || |||||||||||||     
38621661 taattattatttttatttgagaatatcacttcccataaatttagcttatggtggttgtgataagaataagaatttgattgaagtttttatatttccttcg 38621562  T
186 ttcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||    
38621561 ttcaaatccaatagtttgtttcctccacttctgtggatttgtttcttttgatcatatctacaagtgttgttgaactgat 38621483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 39199833 - 39200082
Alignment:
5 acataaaatagaacacacacattagtagtgt----ttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattattttta 100  Q
    |||||||||||||||||||||||| ||||||    ||||||||||||||||| |||| ||||||| |||||||||||||||||||              |    
39199833 acataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatgataaaaataatag--------------a 39199918  T
101 tttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagt 200  Q
    ||   |||||||| || |||||||||| ||||||||| | || ||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||    
39199919 ttcatgaatatcacttcccataaatttggcttatggtagctgtgattagaataagaatttaattaaatttcttatatttccttcattcaaatcaaatagt 39200018  T
201 ttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
39200019 ttgtttcctccacttttgtcgatttgtttcttttgatcctatccacaagtgttgttgaactgat 39200082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 33300381 - 33300529
Alignment:
59 aatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaat 158  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||  |||||||||||||||| ||| ||| |||||||||||||||    
33300381 aatacttgataatgataaaaataatagtaattattatttttattcgtgaatatcaattctcataaatttagcttatcgtgtttgtgataagaataagaat 33300480  T
159 ttaatttaatttcttatatttccttcattcagatccaatagtttgtttc 207  Q
    |||||| ||||| |||||||| ||||||||| ||| |||| ||||||||    
33300481 ttaattgaattttttatatttacttcattcaaatctaataatttgtttc 33300529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 16834364 - 16834250
Alignment:
150 aataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataag 249  Q
    ||||||||||||||| |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||     
16834364 aataagaatttaattgaatttcttatatttcctttatttaaatccaatagtttgtttcctctacttttgtggatttgtttcctttgatcctatccacaaa 16834265  T
250 tgttgttgaactgat 264  Q
    |||||||||||||||    
16834264 tgttgttgaactgat 16834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 47450448 - 47450544
Alignment:
168 tttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
47450448 tttcttatatttccttcattcaaatccaatagtttgtttcctccactttcgtggatttgtttcttttgattctatccacaagtgttgttgaactgat 47450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 12261006 - 12260860
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||| |||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||     
12261006 acataaaatagaacacactcattagtagtgtttaaatagtggtatttaattttaaatacttgataatgataaaaataatagtaattattattttttattc 12260907  T
105 a-gaatatcattttccataaatttagcttatggtggttgcgataaga 150  Q
    | | |||||| ||  ||||| ||||||||||| |||||| |||||||    
12260906 atggatatcacttctcataattttagcttatgttggttgtgataaga 12260860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 16036636 - 16036453
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt-tttattt 103  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||| ||| ||||| |||||||||| ||||||||| | ||||||||| ||||||     
16036636 acataaaatagaacacacacattagtagtgtttaaatagtggtatttaaatttaaatacctgataatgatgaaaataataattattattattctttattc 16036537  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
      |||||||| ||||||||| ||||| ||||| | |||| ||||||| | |||||  || | |||||||||| |||||||||||    
16036536 atgaatatcactttccataattttaggttatgtttgttgtgataagattgagaatccaactgaatttcttatctttccttcatt 16036453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 261
Target Start/End: Complemental strand, 8138593 - 8138396
Alignment:
75 aaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataa----------gaatttaatt 164  Q
    |||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||| |  ||||||||||          ||||| || |    
8138593 aaaaataatagtaattattatttttattcgtgaatatcacttcccataaatttagcttatggtggtcgtaataagaataagaataagaatgaattcaact 8138494  T
165 taatttcttatatttccttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaact 261  Q
     |||||| ||| |||||||| | || ||||||| | |||||||||||||||||||||| ||| |||||||||||| |||| | |||||||||||||||    
8138493 gaatttcctatctttccttcgtccatatccaatgaatttgtttcctccacttttgtggttttatttcttttgatcttatctacaagtgttgttgaact 8138396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 38622219 - 38622135
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaat 89  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
38622219 acataaaatagaactcacatattagtagtgtttaaaatgcagtatttgattttgaatacttgataatgataaaaataatagtaat 38622135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 47450279 - 47450375
Alignment:
25 attagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccat 121  Q
    |||||||||||||||| |||  ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||    
47450279 attagtagtgtttaaactgcgttatttaattttaaatacttgataatgataaaaataataattattattatttttattcgagaatatcactttccat 47450375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 23191903 - 23191994
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||||||||||||||||||||||||||||| | |  |||||||||||| ||||| |||||||||||||||||||| | |||||||||    
23191903 acataaaatagaacacacacattagtagtgtttaagtagtggtatttaattttaaatacctgataatgataaaaataataattattattatt 23191994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 20108238 - 20108129
Alignment:
155 gaatttaatttaatttcttatatttccttcattcagatcc-aat-agtttgtttcctccacttttgtggatttgtttc-ttttgatcctatccataagtg 251  Q
    ||||| |||| |||||||||| |||||| |||||| ||   ||| ||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||    
20108238 gaattcaattgaatttcttatctttcctccattcaaattgtaatgagtttgtttcctccacttttggggatttgtttctttttgatcttattcataagtg 20108139  T
252 ttgttgaact 261  Q
    ||||||||||    
20108138 ttgttgaact 20108129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 40166968 - 40166891
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataata 84  Q
    ||||||||||| |||||||| |||||||||||||  |  |||||||||||| ||||| ||||||||||||||||||||    
40166968 ataaaatagaagacacacatcagtagtgtttaaacagtggtatttaattttaaatacctgataatgataaaaataata 40166891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 39586186 - 39586235
Alignment:
47 tatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||||||    
39586186 tatttaattttaaatacctgataatgataaaaataataataattattatt 39586235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 46697311 - 46697271
Alignment:
59 aatacttgataatgataaaaataatagtaattattattttt 99  Q
    ||||||||| |||||||||||||||||||||||||||||||    
46697311 aatacttgaaaatgataaaaataatagtaattattattttt 46697271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 16422076 - 16421817
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
16422076 acataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatgataaaaataatagtaattattatttttattcg 16421977  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||    
16421976 agaatatcactttccataaatttaacttatggtggttgtgataagaataagaatttaattaaatttattatatttccttcattcaaatcaaatagtttgt 16421877  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||    
16421876 ttcctccacttttgaggatttgtttcttttgatcctattcacaagtgttgttgaattgat 16421817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 51698959 - 51698697
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataa--tagtaattattattttt-at 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| ||  ||||||||||||||||| ||    
51698959 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaaaaaaatagtaattattattttttat 51698860  T
102 ttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtt 201  Q
    | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
51698859 tcgagaatatcactttccataaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaatagtt 51698760  T
202 tgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
51698759 tgtttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttaaactgat 51698697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 33468068 - 33468320
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        
33468068 acataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatgataaaaataatagtaattattattttta---- 33468163  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
     |||||||| || ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||    
33468164 -gaatatcacttcccataaatttagcttatggtggttatgataagaataagaatttaattgaatttcttatatttccttcattcaaattcaatagtttgt 33468262  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactg 262  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
33468263 ttcctccacttttgtggatttgtttcttttgatcatatccacaagtgttgttgaactg 33468320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 13060496 - 13060237
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||| ||||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||    
13060496 acataaaaaagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataacaataatagtaattcttatttttatttg 13060397  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
13060396 agaatatcacttcccataaatttagcttatggtggttgtgataaaaataagaatttaattgaatttcttatatttccttcattcaaatccaatactttgt 13060297  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
13060296 ttcctccacttttgttgatttgtttcttttcatcctatccacaagtgttgttgaactgat 13060237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 37263630 - 37263884
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||    
37263630 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attcga 37263728  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||| |    
37263729 gaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttggt 37263825  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
37263826 tcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 37263884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 32081234 - 32081489
Alignment:
8 taaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgaga 107  Q
    ||||||||||| ||||||||||||||||||||||||   ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||    
32081234 taaaatagaactcacacattagtagtgtttaaattgtgatatttaattttaaatacttgataattataaaaataatagtaattattatttttattcgaga 32081333  T
108 atatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttc 207  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||| |||||| ||||||||||    
32081334 atatcacttcccataaatttagcttatggtggttgtgataagaataagaatttaattgaattttttatattttcttcattca-atccaacagtttgtttc 32081432  T
208 ctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
32081433 ctccacttttgtggatttgtttcagttgatcctatccacaagtgttgttgaactgat 32081489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 37258930 - 37259184
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||    
37258930 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattatta-ttttattaga 37259028  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||| ||||| ||||||||||||| |    
37259029 gaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttcctttattcaaatccaatagtttggt 37259125  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
37259126 tcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 37259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 264
Target Start/End: Complemental strand, 19907268 - 19907016
Alignment:
15 gaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcat 114  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| | ||||||||     
19907268 gaacacacacattagcagtgtttaaattgcggtatttaattttaaatacttgatgatgataaaaataatagaaattattatttttattcgtgaatatcac 19907169  T
115 tttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcct---cc 211  Q
    || |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||   ||    
19907168 ttcccataaatttagcttatgattgttgcgataagaataagaatttaattaaatttcttatatttccttcgttcaaatccaatagtttgtttcctccacc 19907069  T
212 acttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
19907068 acttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 19907016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 8694743 - 8694488
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |    
8694743 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcg 8694645  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||| | |||||||    || |||||||||||||||||| ||||||||||||||    
8694644 agaatatcactttccataaatttaggttatggtggttgtgataagaataatattttaatt---attattatatttccttcattcaaatccaatagtttgt 8694548  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
8694547 ttcctccacttttgtgaatttgtttcttttgatcctatccacaagtgttgttaaactgat 8694488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 31728431 - 31728686
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| |    
31728431 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatgataaaaataatagtaattatta-ttttattcg 31728529  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
31728530 agaatatcacttttcataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 31728626  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
31728627 ttcctccacttttgtggatttgtttcttttgatcatatccacaagtgttattgaactgat 31728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 31274543 - 31274289
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| | |||||||||||||||||||||||||||| ||| ||    
31274543 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtgataaaaataatagtaattattatttt-attcga 31274445  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||| |    
31274444 gaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttggt 31274348  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
31274347 tcctccatttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 31274289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 5270488 - 5270744
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatactt-gataatgataaaaataatagtaattattatttttattt 103  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||| |||||||||||||||||||||| |||||||||| |||     
5270488 acataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatgataaaaataatagtagttattatttt-attc 5270586  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
      |||||||| |||||||||||||||||||||||||||| |||||||| || |||||||||    || |||||||||||||||||| |||||||||||||    
5270587 tcgaatatcactttccataaatttagcttatggtggttgtgataagaaaaataatttaatta---ttattatatttccttcattcaaatccaatagtttg 5270683  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
5270684 tttcctccacttttgtggatttgtttcttttgatcttatccacaagtgttgttgaactgat 5270744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 31766902 - 31766647
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttattt 103  Q
    |||||||||||||||||||||||| ||||||| ||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||| |||     
31766902 acataaaatagaacacacacattaatagtgtt-aaattgtggtatttaatttttaaatacttgataatgataaaaataatagtaattattatttt-attc 31766805  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
    |||||||||| ||||||||||||||| ||||||||||||  |||| ||||| |||||||||    || |||||||||||||||||| |||||||||||||    
31766804 gagaatatcactttccataaatttagtttatggtggttgttataaaaataataatttaatta---ttattatatttccttcattcaaatccaatagtttg 31766708  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
31766707 tttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 31766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 19 - 264
Target Start/End: Original strand, 33462434 - 33462678
Alignment:
19 acacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttc 118  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||     ||||||||| || |    
33462434 acacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatgataaaaataatagtaattattattttt-----agaatatcacttcc 33462528  T
119 cataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctcc----act 214  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||| |||||||||| |    |||    
33462529 cataaatttagcttacggtggttgtgataagaataataatttaattgaattttttatatttccttcattcaaatccaataatttgtttccttcctttact 33462628  T
215 tttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
33462629 tttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 33462678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 32220630 - 32220887
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||| |||||||| ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |    
32220630 acataaaatagaacatacacattattagtgtttaaattccgatatttaattttaaatatttgataatgataaaaataatagtaattattatttttattcg 32220729  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |  |||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||| |    
32220730 a--atatcacttttcataaatttaacttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatctaatggtttct 32220827  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| || |||||||||||||||||||||||||||||  | ||||||||||||| ||||    
32220828 ttccttcatttttgtggatttgtttcttttgatcctatatacaagtgttgttgaaatgat 32220887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 55252674 - 55252482
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |    
55252674 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagcaattattatttttattgg 55252575  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat 197  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
55252574 agaatattactttccataaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcattcaaatccaat 55252482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 29349271 - 29349513
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaa-taatagtaattattattttt-att 102  Q
    |||||||||||||| |||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||| ||||| |||||||||||||| |||    
29349271 acataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatgataaaaaataatattaattattattttttatt 29349370  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
     | ||||||||||| |||||||||||||||||||| |||  ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||    
29349371 cgtgaatatcatttcccataaatttagcttatggttgttatgataagaataaaaatttaattaaatttcttatatttccttcattcaaatccaataattt 29349470  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatcca 245  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
29349471 gtttcctccacttttgtgaatttgtttcttttgatcttatcca 29349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 13064876 - 13065125
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
13064876 acataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 13064975  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatt-taatttcttatatttccttcattcagatccaatagtttg 203  Q
     |||||||| || |||| |||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||| ||||||||| ||| |  ||||||    
13064976 tgaatatcacttcccat-aatttagcttatggtggttgtgataagaataagaattcaattgaaatttcttatattttcttcattcaaatcaatgagtttg 13065074  T
204 tttcctccacttttgtggatttgtttc--ttttgatcctatccataagtgt 252  Q
    |||||||||||||||||||||||||||  |||||||| |||||| ||||||    
13065075 tttcctccacttttgtggatttgtttcttttttgatcttatccacaagtgt 13065125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 5927363 - 5927538
Alignment:
85 gtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttc 184  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||||    || |||||||||||||    
5927363 gtaattattatttt-attcgagaatatcactttccataaatttagcttatgatgattgtgataagaataataatttaatta---ttattatatttccttc 5927458  T
185 attcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
5927459 attcaaatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 5927538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 2820822 - 2820670
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||||||| |||    
2820822 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatgataaaaataatagtaattattattttta-ttg 2820724  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaat 158  Q
     |||||||| || |||||||||||||||||| |||||| ||||||| |||||||    
2820723 tgaatatcacttcccataaatttagcttatgttggttgtgataagattaagaat 2820670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 23094139 - 23093925
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||| ||||||||||||||||||| ||||||| |   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
23094139 acataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatgataaaaataatagtaattattatttttattta 23094040  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
       |||||| ||  | ||||||||||||||   ||||| |||||||||||||||| |||| | ||| |||| |||| ||| |||| || |||| ||||||    
23094039 tagatatcacttctcgtaaatttagcttatataggttgtgataagaataagaattcaattgagttt-ttatctttctttctttcatattcaatgagtttg 23093941  T
204 tttcctccacttttgt 219  Q
    ||||||||||||||||    
23093940 tttcctccacttttgt 23093925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 12822976 - 12823097
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||| ||||||||||||||||||||| ||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||      
12822976 acataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatgataaaaataatagtaattattatttttattcc 12823075  T
105 agaatatcattttccataaatt 126  Q
    ||||||||| || |||||||||    
12823076 agaatatcacttcccataaatt 12823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 231
Target Start/End: Complemental strand, 16949026 - 16948803
Alignment:
10 aaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgata-aaaataatagtaattattatttttatttgagaa 108  Q
    |||||||||||||| |||||||||||| |||||   ||||||| |||||||||||||||||||||| |||| |||||||||||||| ||||| |     |    
16949026 aaatagaacacacatattagtagtgttcaaattcttgtatttagttttgaatacttgataatgataaaaaagaatagtaattattagttttactcattga 16948927  T
109 tatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaa-tagtttgtttc 207  Q
    |||||||| |||||| ||||||||||| |||||  ||||||| | |||||  || | | |||| ||||| |||||||| || |||||| |||||||||||    
16948926 tatcatttcccataattttagcttatgttggttatgataagattgagaatcgaactgagtttcctatatctccttcatccatatccaattagtttgtttc 16948827  T
208 ctccacttttgtggatttgtttct 231  Q
     | |||||||||||||||||||||    
16948826 attcacttttgtggatttgtttct 16948803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 12823099 - 12823208
Alignment:
153 aagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgt 252  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||    
12823099 aagaatttgattgaatttcttatatttccttcattcaaatccaatagtttgtttcctccacttt--tggatttgtttcttttgatcatatccacaagtgt 12823196  T
253 tgttgaactgat 264  Q
    ||||||| ||||    
12823197 tgttgaattgat 12823208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 39216233 - 39216394
Alignment:
74 taaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttctt 173  Q
    ||||||||||||||||||||||||||||| | | |||||| ||  |||||||||| |||||| |||||| |||||||||||||||| |||| | |||  |    
39216233 taaaaataatagtaattattatttttattcgtgtatatcacttcgcataaatttatcttatgttggttgtgataagaataagaattcaattgagttttct 39216332  T
174 atatttccttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttctttt 234  Q
    || |||||||  |||| || |||| |||||||||||| ||||||||||||||||||||||||    
39216333 atctttccttggttcatattcaatgagtttgtttcctacacttttgtggatttgtttctttt 39216394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 6943814 - 6943549
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaa----------taatagtaattatta 94  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||  |||||||||||||||||||||          || ||||||||||||    
6943814 acataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaaaaaataatagtagtagtaattatta 6943715  T
95 tttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaa---tttaatttaatttcttatatttccttcattcaga 191  Q
    |||||||| | |||||||| || |||||||| ||          |||| ||||||||||||||   || || | |||||| ||| || |||||||||| |    
6943714 tttttattggtgaatatcacttcccataaatcta---------tgttgtgataagaataagaatatttcaactgaatttcctatcttcccttcattcata 6943624  T
192 tccaat-agtttgtttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||| ||||||||||||| ||||||||| |||  |||| |||||||| | |||| ||||||||||||||||||    
6943623 tccaatgagtttgtttcctcaacttttgtgtattcttttctttttgatcttgtccagaagtgttgttgaactgat 6943549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 40408975 - 40408782
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataa------tagtaattattattttta 100  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||| |||| ||||| ||| |||||||||      ||||||||||||||||||    
40408975 ataaaatagaacacacatattattagtgtttaaattgcggtatttaattttaaatatttgat-atggtaaaaataatagtagtagtaattattattttta 40408877  T
101 tttgagaatatcattttccataaatttagcttatggtggttgcg------ataagaataagaatttaatttaatttcttatatttccttcattca 189  Q
    || | |||||||| || ||||| ||||||||||||||||| | |      ||||||||||||||| |||| ||||| |||| |||| ||||||||    
40408876 ttagtgaatatcacttcccatacatttagcttatggtggtagtgatagaaataagaataagaattcaattgaattttttatttttctttcattca 40408782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 19107608 - 19107511
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||| |||||||||| ||||||||| ||||||||||| |||||    
19107608 acataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaatacctgataatgatgaaaataataataattattattcttatt 19107511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 5925863 - 5925943
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagta 87  Q
    ||||||||||||||||  ||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||    
5925863 acataaaatagaacac--acattagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta 5925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12875433 - 12875290
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattat-ttttatttg 104  Q
    ||||||||||||| |||||||||||| | ||||||| |  |||||| ||||| |||| |||||||||||||| ||||||||||||||||| ||||| |      
12875433 cataaaatagaacccacacattagtaatatttaaatagtggtatttgattttaaatatttgataatgataaacataatagtaattattattttttactca 12875334  T
105 agaatatcattttccataaatttagcttatggtggttgcgataa 148  Q
     |||||||| || |||||| ||||| ||||| |||||| |||||    
12875333 tgaatatcacttcccataattttaggttatgttggttgtgataa 12875290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 19102996 - 19102905
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    |||||||||||||||||||||||| |||||||||||| |   ||||||||||| ||||| |||||||||| ||||||||| |||||||||||    
19102996 acataaaatagaacacacacattaatagtgtttaaatagtgatatttaattttaaatacctgataatgatgaaaataataataattattatt 19102905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 27183263 - 27183183
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagta 87  Q
    |||||||||||||||||||  |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||    
27183263 acataaaatagaacacaca--ttagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta 27183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8028215 - 8028292
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataat 83  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||  | |||||||||||||||||    
8028215 cataaaatagaacacacacattagtagtgtttaaatagttgtatttaattttaaataactaataatgataaaaataat 8028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 47245158 - 47244977
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt-tttatttga 105  Q
    |||||||||||||||||||||| |||||||||||| ||  ||||||||||| ||||  ||||| |||| ||||||||  ||||||| ||| ||||||       
47245158 ataaaatagaacacacacattattagtgtttaaatagcgatatttaattttaaataactgatattgatgaaaataattataattataattctttattcat 47245059  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
      ||||||||| |||||| ||||| ||||| | |||| |||| || | |||||  || | |||||| |||| ||||||||||    
47245058 agatatcatttcccataattttaggttatgtttgttgtgatatgattgagaatccaactgaatttcctatacttccttcatt 47244977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 19907319 - 19907269
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaatt 55  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
19907319 acataaaatagaacacacacattagcagtgtttaaattgcggtatttaatt 19907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 48275906 - 48275993
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    |||||||| |||||||||  ||| ||||||||||| |  ||||||| |||| ||||||| |||||||| ||||||||| |||||||||||    
48275906 ataaaatataacacacac--tagcagtgtttaaatagtggtatttatttttaaatacttaataatgatgaaaataataataattattatt 48275993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 39216186 - 39216234
Alignment:
52 aattttgaatacttgataatgataaaaataatagtaattattattttta 100  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||    
39216186 aatttttaatatttgataatgataaaaataatcgtaattattattttta 39216234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 8029477 - 8029604
Alignment:
61 tacttgataatgataaaaataatagtaattattatt-tttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatt 159  Q
    |||||||||||||| ||||||||| |||| |||||| ||||||   | |||||| || ||||||  |||| ||||| | ||||| |||||| | ||||||    
8029477 tacttgataatgatgaaaataataataataattattctttattcatggatatcacttcccataatcttaggttatgtttgttgcaataagattgagaatt 8029576  T
160 taatttaatttcttatatttccttcatt 187  Q
     || | |||||||||| |||||||||||    
8029577 caactgaatttcttatgtttccttcatt 8029604  T

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Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 55252483 - 55252441
Alignment:
222 atttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
55252483 atttgtttattttgatcctatccacaagtgttgttgaactgat 55252441  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 29985050 - 29985139
Alignment:
8 taaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||| || ||| |||||||||||||| | ||  ||||||||||||  | |||  ||||||||||||||| |||||||||||||||    
29985050 taaaatagagcaaacaaattagtagtgtttacaatgttgtatttaattttttagtacccgataatgataaaaatgatagtaattattatt 29985139  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 12878931 - 12878856
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaata 81  Q
    ||||||||||||||| |||||||| ||||||||||||     ||||| ||| | |||||||||||||||||||||||    
12878931 acataaaatagaacatacacattaatagtgtttaaataatgatattt-attataaatacttgataatgataaaaata 12878856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 2820644 - 2820585
Alignment:
200 tttgtttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttga 258  Q
    ||||||||||||||||||| | ||||||||| |||||||| ||| || ||||||||||||    
2820644 tttgtttcctccacttttgcgtatttgtttctttttgatcttattcacaagtgttgttga 2820585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 16955190 - 16955123
Alignment:
168 tttcttatatttccttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttctttt 234  Q
    ||||| || |||||||||||||  || ||| |||||||||| |||||||||||||||||||| |||||    
16955190 tttctaatctttccttcattcatgtcaaattagtttgtttcatccacttttgtggatttgttactttt 16955123  T

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Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 20520991 - 20520732
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |    
20520991 acataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatgataaaaataatagtaattattatttttattcg 20520892  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||    
20520891 agaatatcacttcccataaatttagcttatggtggttgtgataagaataagaatttaattaaatttcttatatttcctttattcaaacccaatagtttgt 20520792  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
20520791 ttcctctgcttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 20520732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 14437756 - 14438020
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |    
14437756 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataataataattattatttttattcg 14437855  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaattt-----aatttcttatatttccttcattcagatccaatag 199  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||    
14437856 agaatatcactttccataaatttagcttacggttgttgtgataagaataagaatttaatttaattgaatttcttatatttccttcattcaaatccaatag 14437955  T
200 tttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
14437956 tttgtttcctccgcttttgtggatttgtttcttttgatcctatccacaagttttgttgaactgat 14438020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 12970874 - 12971135
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaa-ataatagtaattattatttttatt 102  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |||| ||||||||||||| ||||||||||||||||||||||||    
12970874 acataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatgataaaaaataatagtaattattatttttatt 12970973  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
     | |||||||| || |||||||||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
12970974 cgtgaatatcacttcccataaatttagcttatgatggttgtgataataataagaatttaattaaatttcttatatttccttcattcaaatccaatagttt 12971073  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
12971074 gtttcgtccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 12971135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 7570282 - 7570535
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||    
7570282 cataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcga 7570380  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||  |||    |||||||||||||||| |||||||||||||||    
7570381 gaatatcactttccataaatttagtttatggtggttgtgataagaataataatttaattatatt----atatttccttcattcaaatccaatagtttgtt 7570476  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
7570477 tcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 7570535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 23665189 - 23665442
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgag 106  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||    
23665189 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attagag 23665287  T
107 aatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgttt 206  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| ||||||||||||| ||    
23665288 aatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatattttcttcattcaaatccaatagtttggtt 23665384  T
207 cctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
23665385 cctccacttttgtggatttgtttcttttgattctatccataagtgttgttgaactgat 23665442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 18473036 - 18472781
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |    
18473036 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcg 18472938  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||    || |||||||||| | ||||| || |||||||||||    
18472937 agaatatcactttccataaatttagcttatgatggttgtgataagaataataatttaatt---attattatatttccattattcaaattcaatagtttgt 18472841  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
18472840 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 18472781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 23660555 - 23660810
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |    
23660555 acataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attag 23660653  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| |||||||||||||     
23660654 agaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatattttcttcattcaaatccaatagtttgg 23660750  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
23660751 ttcctccacttttgtggatttgtttcttttgattctatccataagtgttgttgaactgat 23660810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 55326807 - 55326555
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |    
55326807 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtagttatta-ttttattcg 55326709  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||    || ||||||||| |||||||| ||||||||||||||    
55326708 agaatatcactttcgataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttcattcattcaaatccaatagtttgt 55326612  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaact 261  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
55326611 ttcctcaacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaact 55326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 18468242 - 18467987
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |    
18468242 acataatatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttaatcg 18468144  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| | |||||||||| |    
18468143 agaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaacccaatagttttt 18468047  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
18468046 ttcctccacttttgtggatttgtttcttttgatcatatccgcaagtgttgttgaactgat 18467987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 27709959 - 27709706
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||| ||   ||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |    
27709959 acataaaatagaacatacg--ttagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcg 27709863  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||| ||||||||||| |||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
27709862 agaatatcacttttcataaatttagtttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgt 27709766  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
27709765 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 27709706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 55432243 - 55432004
Alignment:
19 acacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttc 118  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |    
55432243 acacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaattatattaattattatttttattcgagaatatcatttcc 55432144  T
119 cataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttg 218  Q
    |||||||||| ||||||||||||| |      |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
55432143 cataaatttaacttatggtggttgtg------ataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgtttcctccgcttttg 55432050  T
219 tggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||    
55432049 tggatttatttcttttgatcatatccacaagtgttgttgaactgat 55432004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 254
Target Start/End: Complemental strand, 46965042 - 46964794
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||| ||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| |    
46965042 acataaaatagaactcacacatta-tagtgtttaaactgcggtatttaattttaaatacttgataatgataaaaataataataataattatttttattcg 46964944  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||    
46964943 agaatatcacttcacataaatttagcttatggtggttgtgataagaataagaatttaattgaatttcttatatttccttcattcaaatccagtagtttgt 46964844  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttg 254  Q
    || ||||||| ||||||||||||||||||||||| ||||||  |||||||    
46964843 tttctccactcttgtggatttgtttcttttgatcttatccacgagtgttg 46964794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 757430 - 757683
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||   | |    
757430 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattta-aatacttgataatgataaaaataatagtaattattatttta--tag 757526  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| ||||||||| ||||    
757527 agaatatcactttccataaatttagtttatggtggttgtgataagaataataatttaatta---ttattatattttcttcattcaaatccaatagcttgt 757623  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    | ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
757624 tacctccacttttgtggatttgtttcttttgatactatccacaagtgttgttgaactgat 757683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 39774891 - 39775122
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |    
39774891 acataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcg 39774989  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||    || ||||||||| |||||||| ||  ||||||||||    
39774990 agaatatcactttccataaatttagcttatgatggttgtgataagaataataatttaatt---attattatatttcattcattcaaatataatagtttgt 39775086  T
205 ttcctccacttttgtggatttgtttcttttgatcct 240  Q
    ||||||||||||||||||||||||||||||||||||    
39775087 ttcctccacttttgtggatttgtttcttttgatcct 39775122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 12964950 - 12965206
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattatttttattt 103  Q
    |||||||||| |||||| || ||||||||||||||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||||| ||      
12964950 acataaaata-aacacaaactttagtagtgtttaaattgcggtatttaattttaaaatatttgataatgataaaaataatagtaattattatttt-atac 12965047  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
       ||||||| || |||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |    
12965048 ataaatatcacttcccataaatttagcttatgatggatgtgataagaataagaatttaattcaatttcttatatttccttcattcaaatccagtagttcg 12965147  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactg 262  Q
    |||||||| ||||||| ||| | |||||||||||| |||||| ||||||||||||||||    
12965148 tttcctccgcttttgtcgatctatttcttttgatcttatccacaagtgttgttgaactg 12965206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 68 - 264
Target Start/End: Complemental strand, 3419960 - 3419764
Alignment:
68 taatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaa 167  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||||||| |||||| |||| ||||||||||||||||||||| ||    
3419960 taatgataaaaataatagtaattattatttttattcgagaatatcacttcgcataaatttagcatatggtagttgtgataagaataagaatttaattgaa 3419861  T
168 tttcttatatttccttcattcaga-tccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| ||||||||||||||||||| || |||||| ||||||||    
3419860 tttcttatatttccttcattcaaattcaaatagtttgtttcctccacttttgtgaattt-tttcttttgatcctatccacaactgttgtcgaactgat 3419764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 32473187 - 32473344
Alignment:
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| |||||||||||||    
32473187 gagaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttg 32473283  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||    
32473284 tttcctccacttttgtgaatttgtttcttttgatcctatccacaaatgttgttgaactgat 32473344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 33 - 264
Target Start/End: Original strand, 12111679 - 12111928
Alignment:
33 tgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataa----attta 128  Q
    |||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||||| || ||||||    |||||    
12111679 tgtttaaatttcggtatttaattttaaatgcttgataatgataaaaataatagtaattattatttttattcgtgaatatcacttcccataattaaattta 12111778  T
129 gcttatggtggttgcgataagaata------------agaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtttcctccactt 215  Q
    |||||||||| ||| | ||||||||            ||||||||||| |||||||||||||| |||| |||| ||||||| | ||||||||||||||||    
12111779 gcttatggtgattgtgctaagaatatgaatatgaataagaatttaattgaatttcttatatttacttcgttcaaatccaatgaatttgtttcctccactt 12111878  T
216 ttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||    
12111879 ttgtggatttgtttctttttgatcctatctacaagtgttgttgaactgat 12111928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 29351257 - 29351074
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt-tttattt 103  Q
    |||||||||| ||||||||||||| |||||||||||| |  |||||||||||| ||||  |||||||||| ||||||||| ||||||||||| ||||||     
29351257 acataaaataaaacacacacattattagtgtttaaatagtggtatttaattttaaatatctgataatgatgaaaataataataattattattctttattc 29351158  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
      | |||||| ||  ||||| ||||| ||||| | |||| ||||||| | | |||| || | |||||| ||| |||||||||||    
29351157 atggatatcacttctcataattttagattatgtttgttgtgataagattgaaaattcaactgaatttcctatctttccttcatt 29351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 3656323 - 3656414
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||||||||||  ||||||||||||||||||| |  |||||||||||| ||||| |||||||||| ||||||||| | |||||||||    
3656323 acataaaatagaacacggacattagtagtgtttaaatagtggtatttaattttaaatacctgataatgatgaaaataataattattattatt 3656414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 7860738 - 7860642
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaa-ttttgaatacttgataatgat-aaaaataatagtaattattattttt 99  Q
    |||||||||||||||||||||||| |||||||||||||   |||||||| |||| ||||  | |||||||| ||||| ||||||| |||||||||||    
7860738 acataaaatagaacacacacattaatagtgtttaaattatggtatttaatttttaaatatcttataatgataaaaaaaaatagtatttattattttt 7860642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 20175421 - 20175371
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaatttt 57  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||||||    
20175421 acataaaatagaacacaca--ttagtagtatttaaattgcagtatttaatttt 20175371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 3426103 - 3426051
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaatttt 57  Q
    |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||    
3426103 acataaaatagaactcacacattagtagtgtttaaactgcggtattcaatttt 3426051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 2206909 - 2206970
Alignment:
21 acacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataa 82  Q
    |||||| |||||||||||||| |||||||||||||||  |||  |||||||||| |||||||    
2206909 acacatcagtagtgtttaaatagcagtatttaattttacatatctgataatgatgaaaataa 2206970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 20508465 - 20508416
Alignment:
197 tagtttgtttcctccacttttgtggatttgtttc-ttttgatcctatcca 245  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||||    
20508465 tagtttgtttcctccacttttgtgggtttgtttcattttgatcttatcca 20508416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 12565199 - 12565296
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaa-ttttgaatacttgataatgat---aaaaataatagtaattattattttta 100  Q
    |||||||| |||| | ||||||||||| ||||||||    |||| || |||| ||||| ||||||||||   ||||||||||||||||||||||||||    
12565199 ataaaatataacatatacattagtagtttttaaattatgatattcaatttttaaatacctgataatgataaaaaaaataatagtaattattattttta 12565296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 13259598 - 13259695
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaa-ttttgaatacttgataatgat---aaaaataatagtaattattattttta 100  Q
    |||||||| |||| | ||||||||||| ||||||||    |||| || |||| ||||| ||||||||||   ||||||||||||||||||||||||||    
13259598 ataaaatataacatatacattagtagtttttaaattatgatattcaatttttaaatacctgataatgataaaaaaaataatagtaattattattttta 13259695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 1808479 - 1808222
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgag 106  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||     
1808479 ataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagtaattattatttttatttgaa 1808380  T
107 aatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgttt 206  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||    
1808379 aatatcattttctataaatttagcttatggtggttgtgataagaataagaatttaattaaattttttatatttccttcattcaaatctaatagtttgttt 1808280  T
207 cctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
     |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||    
1808279 gctccacttgtgtggatttgtttcttttgatcctatccacaagtgttgttgaattgat 1808222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 40124961 - 40125215
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
40124961 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-atttga 40125059  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||    || |||||||||||||||||| |||||||||||||||    
40125060 gaatatcactttccataaatttagcttatggttgttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgtt 40125156  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
40125157 tcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 40125215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 38181348 - 38181605
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
38181348 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 38181447  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |||||| || || ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||    
38181448 agaataccacttcccataaatttaacttagggtggttgtgataagaataagaatttaattaaatttcttatatttcctttattcaaattcaatagtttgt 38181547  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactg 262  Q
    ||||||| ||||| || ||||||||||||||||| |||||| ||||||||| ||||||    
38181548 ttcctccgcttttatgcatttgtttcttttgatcatatccacaagtgttgtcgaactg 38181605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 18875451 - 18875709
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |    
18875451 acatacaatagaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgatacaaataatagtaattattgtttttattcg 18875550  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |||||||||||||||||||||||| |||||| |||||| |||| ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
18875551 agaatatcattttccataaatttaacttatgatggttgtgatatgaataagaattaaattaaatttcttatatttccttcattcatatccaatagtttgt 18875650  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||    |||||||||||||||||||||||||||| ||||||||||||||||||    
18875651 ttcctccac-aaagtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 18875709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 33417560 - 33417305
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |    
33417560 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattatta-ttttattcg 33417462  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||| ||||||||||||||||| ||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
33417461 agaatatcactttctataaatttagcttatggcggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 33417365  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
33417364 ttcctccactattgtggatttgtttcttttgattctatccacaagtgttgttgaactgat 33417305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 1910013 - 1910273
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaa-ataatagtaattattatttttattt 103  Q
    |||| ||||||| | |||||||||||||||||||||  |  |||||||||||| |||||||||||||||||||| ||||||||||||  ||||||||||     
1910013 acatgaaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatgataaaaaataatagtaattgctatttttattc 1910112  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
    |||||||||| ||  ||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||     
1910113 gagaatatcacttctcataaatttaatttatggtggttgtgataagaataagaatttaattgaatttcttatatttccttcattcaaatccaatagttta 1910212  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
1910213 tttcctcaacttttgtggatttgtttcttttgatcatatccacaagtgttgttgaactgat 1910273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 46 - 264
Target Start/End: Complemental strand, 17027130 - 17026916
Alignment:
46 gtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcga 145  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||| ||    
17027130 gtatttaattttaaatacttgataatcataaaaataatactaattattatttttattcgagaatatcacttttcataaatttagcttaaggtggttgtga 17027031  T
146 taagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatcca 245  Q
    |||||||||||||||||||    || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
17027030 taagaataagaatttaatt---attattatattttcttcattcaaatccaatagtttgtttcctccacttttgtggatttgtttcttttgat-ctatcca 17026935  T
246 taagtgttgttgaactgat 264  Q
     ||||||||||||||||||    
17026934 caagtgttgttgaactgat 17026916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 46 - 264
Target Start/End: Complemental strand, 17557622 - 17557408
Alignment:
46 gtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcga 145  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||| ||    
17557622 gtatttaattttaaatacttgataatcataaaaataatactaattattatttttattcgagaatatcacttttcataaatttagcttaaggtggttgtga 17557523  T
146 taagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatcca 245  Q
    |||||||||||||||||||    || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
17557522 taagaataagaatttaatt---attattatattttcttcattcaaatccaatagtttgtttcctccacttttgtggatttgtttcttttgat-ctatcca 17557427  T
246 taagtgttgttgaactgat 264  Q
     ||||||||||||||||||    
17557426 caagtgttgttgaactgat 17557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 2966613 - 2966373
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgag 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| | |    
2966613 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatgataaaaattatagtaattattatttttattcgtg 2966514  T
107 aatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaa-tttcttatatttccttcattcagatccaat-agtttgt 204  Q
    ||||||| || | ||||||||| ||||  ||||||   ||||||||||||||| || | || ||| |||| ||||||||||||| ||||||| |||||||    
2966513 aatatcacttcctataaatttaccttacagtggttctaataagaataagaattcaactaaatttttttatctttccttcattcatatccaatgagtttgt 2966414  T
205 ttcctccacttttgtggatttgtttcttttgatcctatcca 245  Q
    ||||||||||||||||||||||||||||||||||| |||||    
2966413 ttcctccacttttgtggatttgtttcttttgatccgatcca 2966373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 44924987 - 44925235
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |    
44924987 acataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataacagtaattattatttttattcg 44925086  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||| |||||               ||||||||    
44925087 agaatatcatttcccataaatttatcttatggtggttgtgataagaataagaatttaattaaatttattatttttcc---------------tagtttgt 44925171  T
205 ttcctccacttttg----tggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||| ||    |||||||||||||||| ||| |||||| ||||||||||||||||||    
44925172 ttcctccacttgtgtgtatggatttgtttctttttatcatatccagaagtgttgttgaactgat 44925235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 15950638 - 15950838
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatga---taaaaataatagtaattattatttttat 101  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||    
15950638 acataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgatgataaaaataatagtaattattatttttat 15950737  T
102 ttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtt 201  Q
    | |||||||||| || ||||| ||||||||||| || |||| ||||||||||||||||||||| |||||||||||||||||| ||||  |||||||||||    
15950738 tcgagaatatcacttcccatatatttagcttatagtagttgtgataagaataagaatttaattgaatttcttatatttccttgattccaatccaatagtt 15950837  T
202 t 202  Q
    |    
15950838 t 15950838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 26780134 - 26779957
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |    
26780134 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaacaatagtaattattatttttattcg 26780035  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttcct 182  Q
     |||||||  ||  |||||||||| |||||| |||||| |||||||||||||||| |||| |||||||||| ||||||    
26780034 tgaatatctcttctcataaatttaacttatgatggttgtgataagaataagaattcaattgaatttcttatctttcct 26779957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 23547700 - 23547931
Alignment:
35 tttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttat 134  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||   |||||||| |||| |||||||||| ||||    
23547700 tttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattgtttttattcatgaatatca-tttctataaatttagtttat 23547798  T
135 ggtggttgcg------ataagaataagaatttaatttaatttcttatatttccttcattc-agatccaat-agtttgtttcctccacttttgtggatttg 226  Q
    |||||||| |      ||||||||||||||| |||  |||||||||| |||||||||||| | || |||| |||||||||||||||||||||||||| ||    
23547799 ggtggttgtgataagaataagaataagaattcaatggaatttcttatctttccttcattcaaaattcaatgagtttgtttcctccacttttgtggatctg 23547898  T
227 tttcttttgatcctatccataagtgttgttgaa 259  Q
    || |||||||||||||||||| ||||| |||||    
23547899 ttccttttgatcctatccatatgtgttattgaa 23547931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 88 - 238
Target Start/End: Complemental strand, 19168712 - 19168560
Alignment:
88 attattatttttatttgagaatatcattttccataaatttagcttatgg--tggttgcgataagaataagaatttaatttaatttcttatatttccttca 185  Q
    |||||||||||||||  ||||||||| || |||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||| |    
19168712 attattatttttattctagaatatcacttcccataaatttagcttatggcatggttgtgataagaataagaatttaattgaatttcttatatttccttta 19168613  T
186 ttcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatc 238  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
19168612 ttcaaatctaatagtttgtttcctccacttttgtggatttgtttcttttgatc 19168560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 28559182 - 28559279
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
28559182 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagtaattattatttttatt 28559279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 264
Target Start/End: Complemental strand, 17021250 - 17021127
Alignment:
140 ttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcc 239  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||| |||| |||||||||||||||||||||    
17021250 ttgcggtaagaataagaatttaattaaatttcttatatttccttcattcaaatccaaaagtt-gtttcctccatttttatggatttgtttcttttgatcc 17021152  T
240 tatccataagtgttgttgaactgat 264  Q
    |||||| ||||||||||||| ||||    
17021151 tatccacaagtgttgttgaattgat 17021127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 264
Target Start/End: Complemental strand, 17551687 - 17551564
Alignment:
140 ttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcc 239  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||| |||| |||||||||||||||||||||    
17551687 ttgcggtaagaataagaatttaattaaatttcttatatttccttcattcaaatccaaaagtt-gtttcctccatttttatggatttgtttcttttgatcc 17551589  T
240 tatccataagtgttgttgaactgat 264  Q
    |||||| ||||||||||||| ||||    
17551588 tatccacaagtgttgttgaattgat 17551564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 17026833 - 17026694
Alignment:
120 ataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgt 219  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    || |||||||| ||||||||| |||||||||||||||||||||||||||||    
17026833 ataaatttagcttaaggtggttgtgataagaataagaatttaatta---ttattatattttcttcattcaaatccaatagtttgtttcctccacttttgt 17026737  T
220 ggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||| ||||||||||| |||| || ||||||||||||||||||    
17026736 ggatttatttcttttgat-ctat-cacaagtgttgttgaactgat 17026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 17557325 - 17557186
Alignment:
120 ataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgt 219  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    || |||||||| ||||||||| |||||||||||||||||||||||||||||    
17557325 ataaatttagcttaaggtggttgtgataagaataagaatttaatta---ttattatattttcttcattcaaatccaatagtttgtttcctccacttttgt 17557229  T
220 ggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||| ||||||||||| |||| || ||||||||||||||||||    
17557228 ggatttatttcttttgat-ctat-cacaagtgttgttgaactgat 17557186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 28564361 - 28564458
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
28564361 acataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatgataaaaataatagtaattattatttttatt 28564458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 234
Target Start/End: Original strand, 22714109 - 22714294
Alignment:
50 ttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataag 149  Q
    |||||| | |||||| |||||||||| || |||||||||||||||||||||||   | |||||| || |||||||||||||||||| ||| || ||||||    
22714109 ttaattgtaaatactagataatgatacaagtaatagtaattattatttttattcatggatatcacttcccataaatttagcttatgttggctgtgataag 22714208  T
150 aataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttctttt 234  Q
    |||||||||| |||| | |||||| |  ||| |||||||| || |||| |||||||||| || | |||| ||| ||||||||||||    
22714209 aataagaattcaattgagtttcttgtcattctttcattcatattcaatgagtttgtttcatctaattttttgggtttgtttctttt 22714294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 262
Target Start/End: Original strand, 24672387 - 24672645
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgag 106  Q
    |||||||||| ||| || || | ||||||||||||||   ||||||||| | ||||||| ||||||||| |||||||| | || |||||||||||| | |    
24672387 ataaaatagagcacgcagatcaatagtgtttaaattgtgatatttaattgtaaatacttaataatgatagaaataataattatgattatttttattcgtg 24672486  T
107 aatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagat-ccaat-agtttgt 204  Q
     |||||| || | |||||| ||| ||||| ||||||  ||||||||||||||| || | | |||  ||| |||| |||||| | || ||||| |||||||    
24672487 gatatcacttcctataaatgtagtttatgttggttgtcataagaataagaattcaactgagttttctatctttcattcatttatatcccaatgagtttgt 24672586  T
205 ttcctccacttttgtggatttgttt-cttttgatcctatccataagtgttgttgaactg 262  Q
    ||||||||||| ||||| |||||||  |||| ||| ||||||| ||  |||||||||||    
24672587 ttcctccacttatgtgggtttgtttattttttatcttatccatgagatttgttgaactg 24672645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 33100356 - 33100199
Alignment:
78 aataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtgg-ttgcgataagaataagaatttaatttaatttcttata 176  Q
    |||||||||||||||| ||||||||   | ||||||||||||||||||||| ||||   | | ||| |||||||||||||||| || | | |||| |||     
33100356 aataatagtaattattttttttattcatggatatcattttccataaatttaccttacatttgattgtgataagaataagaattcaact-agtttcctatc 33100258  T
177 tttccttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttctttt 234  Q
    ||| ||||||||| | ||||| ||||||||| ||||| |||||||| ||||||||||||    
33100257 ttttcttcattcataaccaatgagtttgttttctccatttttgtggttttgtttctttt 33100199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 17021286 - 17021247
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgc 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
17021286 acataaaatagaacacacacattagtagtgtttaaattgc 17021247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 17551723 - 17551684
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgc 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
17551723 acataaaatagaacacacacattagtagtgtttaaattgc 17551684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 7002675 - 7002594
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattt--tgaatacttgataatgataaaaataata 84  Q
    ||||||||||||| ||| |||||||||||||||||||||  |||||||||||  | |||||  ||||| |||||||||||||    
7002675 acataaaatagaatacatacattagtagtgtttaaattgtggtatttaattttctaaatacccgataaagataaaaataata 7002594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 17953216 - 17953390
Alignment:
9 aaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaa 108  Q
    |||||||||||||||||| |||||||||| ||| |  |||||| ||||| ||| | |||| |||||||||||||   ||||| || ||||||||   | |    
17953216 aaaatagaacacacacatcagtagtgttt-aatagtggtattttattttaaatgcctgattatgataaaaataa---taatttttttttttattcatgga 17953311  T
109 tatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
    ||||| | ||||||| |||| |||||| | |||||||||| | | |||||  || | |||||| ||| |||||||||||    
17953312 tatcactctccataattttatcttatgtttgttgcgataatattgagaatccaactgaatttcctatctttccttcatt 17953390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 33100617 - 33100541
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaa-ttttgaatacttgataatgataaaaataa 82  Q
    ||||||||||||| |||||  ||| || | ||||||||||||||||||| |||| |||||||||||||||||| |||||    
33100617 acataaaatagaatacaca--ttaataatctttaaattgcagtatttaatttttaaatacttgataatgataacaataa 33100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 15950835 - 15950873
Alignment:
226 gtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||| |||||| ||||||||||||||||||    
15950835 gtttcttttgatcttatccacaagtgttgttgaactgat 15950873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 31440254 - 31440200
Alignment:
9 aaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatac 63  Q
    |||||||||||||  ||||||||||||||||||||   ||||||||||| |||||    
31440254 aaaatagaacacaatcattagtagtgtttaaattgtgatatttaattttaaatac 31440200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 19167461 - 19167428
Alignment:
226 gtttcttttgatcctatccataagtgttgttgaa 259  Q
    ||||| ||||||||||||||||||||||||||||    
19167461 gtttcgtttgatcctatccataagtgttgttgaa 19167428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 26779962 - 26779899
Alignment:
204 tttcctccacttttgtggatttgtttc-ttttgatcctatccata--agtgttgttgaactgat 264  Q
    |||||||||||||||||||| |||||| |||| ||| |||||| |  |||||||||||||||||    
26779962 tttcctccacttttgtggatctgtttcttttttatcttatccacaatagtgttgttgaactgat 26779899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 6154498 - 6154754
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
6154498 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 6154597  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
6154598 agaatatcactttacataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttccttcattcaaatccaatagtttgt 6154694  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
6154695 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttaaactgat 6154754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 20180219 - 20180475
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||   |||||||||||||||||||||||||||||||||||||| |    
20180219 acataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaat---tgataatgataaaaataatagtaattattatttttattcg 20180315  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| || |||||||||||    
20180316 agaatatcacttcctataaatttagcttatggtggttgtgataagaataagaatttaattgaatttcttatatttccttcgttcaaattcaatagtttgt 20180415  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
20180416 ttcctccacttatgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 20180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 26668308 - 26668053
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |    
26668308 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcg 26668210  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
26668209 agaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgt 26668113  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
26668112 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 26668053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 26939905 - 26939650
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |    
26939905 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcg 26939807  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
26939806 agaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgt 26939710  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
26939709 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 26939650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 37247866 - 37248121
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
37247866 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttatttga 37247965  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||    || ||||||||| |||||||| |||||||||||||||    
37247966 gaatatcactttccataaatttagtttatggtggttgtgataagaataataatttaatt---attattatatttcattcattcaaatccaatagtttgtt 37248062  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
37248063 acctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 37248121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 37537002 - 37537259
Alignment:
5 acataaaatagaacacacacat--tagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    ||||||||||||||||||||||  |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
37537002 acataaaatagaacacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-att 37537100  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
     |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||    
37537101 cgagaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagttt 37537197  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
37537198 ttttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 37537259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 37646121 - 37646378
Alignment:
5 acataaaatagaacacacacat--tagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    ||||||||||||||||||||||  || ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
37646121 acataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt-att 37646219  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt 202  Q
     |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||    
37646220 cgagaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagttt 37646316  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
37646317 ttttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 37646378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 7452785 - 7452528
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaa-taatagtaattattatttttattt 103  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||     
7452785 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaattaatagtaattatta-ttttattc 7452687  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagttt- 202  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||    || ||||||||| |||||||| ||||||||||||     
7452686 gagaatattattttccataaatttagcttatggtggttgtgataagaataataatttaatt---attattatatttcattcattcaaatccaatagttta 7452590  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
7452589 gtttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 7452528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 29167039 - 29167294
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||| |    
29167039 acataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaacaatagtaattatta-ttttattcg 29167137  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| | |||||||    || ||||||||| |||||||| |||||||| |||||    
29167138 agaatatcactttccataaatttagcttatggtggttgagataagaataatactttaatt---attattatatttcattcattcaaatccaatattttgt 29167234  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
29167235 ttcctccacttttgtggatttgtttcttttgattctatccacaagtgttgttgaactgat 29167294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 36424668 - 36424413
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||| ||||||||||||||||| ||||||||| ||| ||| |    
36424668 acataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatgataaaaataatattaattattaattt-attcg 36424570  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
36424569 agaatatcactttacataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgt 36424473  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||    
36424472 ttcctccacttttgtggatttgtttcttttcatcctattcacaagtgttgttgaactgat 36424413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 12104084 - 12103878
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    
12104084 acataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagttattatttttattcg 12103985  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||  ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
12103984 agaatatcacttctcataaatttagcttatggtgggtgtgataagtataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgt 12103885  T
205 ttcctcc 211  Q
    |||||||    
12103884 ttcctcc 12103878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 50 - 264
Target Start/End: Original strand, 6511740 - 6511957
Alignment:
50 ttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagct---tatggtggttgcgat 146  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||   ||||||||||| |||    
6511740 ttaattttaaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcacttcctataaatttagctgcttatggtggttgtgat 6511839  T
147 aagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccat 246  Q
    |||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||     
6511840 aagaataagaatttaattaaattttttatatttcattcattcaaatccaatagtttgtttcttccgcttttgtggatttgtttcttttgatcctatccac 6511939  T
247 aagtgttgttgaactgat 264  Q
    |||||||||| |||||||    
6511940 aagtgttgttaaactgat 6511957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 264
Target Start/End: Complemental strand, 39519394 - 39519170
Alignment:
36 ttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatg 135  Q
    ||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
39519394 ttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attcgagaatatcactttccataaatttagcttatg 39519296  T
136 gtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttg 235  Q
    || |||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
39519295 gtagttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttggttcctccacttttgtggatttgtttattttg 39519199  T
236 atcctatccataagtgttgttgaactgat 264  Q
    |||||||||| ||||||||||||||||||    
39519198 atcctatccacaagtgttgttgaactgat 39519170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 264
Target Start/End: Complemental strand, 39524033 - 39523809
Alignment:
36 ttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatg 135  Q
    ||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
39524033 ttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attcgagaatatcactttccataaatttagcttatg 39523935  T
136 gtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttg 235  Q
    || |||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
39523934 gtagttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttggttcctccacttttgtggatttgtttattttg 39523838  T
236 atcctatccataagtgttgttgaactgat 264  Q
    |||||||||| ||||||||||||||||||    
39523837 atcctatccacaagtgttgttgaactgat 39523809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 36430548 - 36430294
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||| |||| ||| |||||||||||||||||||||||||||  |||||| |    
36430548 acataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatgataaaaataatagtaattatta-atttattcg 36430450  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||| ||| |||||    || ||||||||| |||||||| ||||||||| ||||    
36430449 agaatatcacttttcataaatttagtttatgttggttgtgataagaataataatataatt---attattatatttcattcattcaaatccaatag-ttgt 36430354  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||    
36430353 ttcctccacttttgtggatttgtttctttacatcctacccacaagtgttgttgaactgat 36430294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 10759427 - 10759531
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
10759427 acataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 10759526  T
105 agaat 109  Q
    |||||    
10759527 agaat 10759531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 16115295 - 16115553
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||  |||||||||||||||| |||||||||| | || ||||||||| |||||||| |||||||  |||||| ||| ||| |||||| |||| |    
16115295 acataaaatgaaacacacacattagtaatgtttaaattacggtgtttaattttaaatacttgctaatgat-gaaataaaagtcattgttatttatattcg 16115393  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     | |||||| || |||||||||||||||| | |||||| ||||| || |||||||||| | | ||||   | ||||||||||||| ||||||| |||| |    
16115394 tggatatcacttcccataaatttagcttacgttggttgtgataaaaacaagaatttaactgagtttc--ctctttccttcattcatatccaatgagttcg 16115491  T
204 tttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    ||| |||||||||||||||||| |||| |||| ||| | |||| || |||||||||||||||    
16115492 ttttctccacttttgtggatttctttcttttttatcatttccacaattgttgttgaactgat 16115553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 40148798 - 40148674
Alignment:
132 tatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttct 231  Q
    |||||| |||| ||||||||||||||||||||||     ||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
40148798 tatggtcgttgtgataagaataagaatttaattt-----cttatattttcttcattcaaatccaatagtttgtttcctccacttgtgtgaatttgtttct 40148704  T
232 tttgatcctatccataagtgttgttgaact 261  Q
    |||||| ||||||| ||| |||||||||||    
40148703 tttgattctatccacaagggttgttgaact 40148674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 23689101 - 23688895
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt--tttatt 102  Q
    ||||||||||||||||||||||| |||||||| ||||||  |||||||||||| ||||| | |||||| ||||||||||||||||||| |||  ||| ||    
23689101 acataaaatagaacacacacattcgtagtgttaaaattgtggtatttaattttaaataccttataatggtaaaaataatagtaattataatttgtttttt 23689002  T
103 tga-gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaa-tagt 200  Q
    ||| | ||||||||| ||| ||  ||||| |||| |||||||||||||| | |||||  ||  || |||  ||||||||||||||||| |||||| ||||    
23689001 tgatggatatcatttcccaaaacattagcctatgttggttgcgataagatttagaatccaacgtagttttctatatttccttcattcatatccaattagt 23688902  T
201 ttgtttc 207  Q
    |||||||    
23688901 ttgtttc 23688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 17162887 - 17162769
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaa-ttttgaatacttgataatgataaaaataatagtaattattatttttattt 103  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||||||     
17162887 acataaaatagaacacacacattagtggtgtttaaattgaggtatttaatttttaaatacctgataatgataaaaataatagtaatgattttttttattc 17162788  T
104 gagaatatcattttccata 122  Q
     || |||||| ||||||||    
17162787 aaggatatcactttccata 17162769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 40148873 - 40148797
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaata 81  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
40148873 acataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaata 40148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 17159407 - 17159312
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaa-ttttgaatacttgataatgataaaaataatagtaattattattttt 99  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||    
17159407 acataaaatagaagacacacattagtagtgttttaattgaggtatttaatttttaaatacctgataatgataaaaataatagtaatgattattttt 17159312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 35678964 - 35679147
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| ||||| ||||| ||||||||||  |||||||| | ||||||||||||  ||     
35678964 acataaaatagaacacacacattagtagtgtttaaatagtggtattttattttaaatacctgataatgatgcaaataataattattattattttttattc 35679063  T
105 a-gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
    | | |||| | || |||||| ||||| ||||| | |||| ||||||| |||||||  || | |||||| ||| |||||||||||    
35679064 atggatattacttcccataattttaggttatgtttgttgtgataagattaagaatccaactgaatttcatatctttccttcatt 35679147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6511669 - 6511726
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaata 62  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
6511669 acataaaatagaactcacacattagtagtgtttaaattgcagtatttaattttaaata 6511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 40567670 - 40567754
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaatta 91  Q
    |||||||| ||||||||| ||||||||| ||||||||  |||||||||||| ||||  | |||||||||||||||||||||||||    
40567670 ataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaatatcttataatgataaaaataatagtaatta 40567754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 205
Target Start/End: Original strand, 22832639 - 22832786
Alignment:
59 aatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaat 158  Q
    |||||||||||||| ||||||||||||||||||||||||||  || |   ||||| ||||||||  ||||| ||||| || ||| |||||||||  ||||    
22832639 aatacttgataatgttaaaaataatagtaattattattttttattcatggtatcactttccatagttttagtttatgttgtttgtgataagaatgtgaat 22832738  T
159 ttaatttaatttcttatatttccttcattcagatccaa-tagtttgtt 205  Q
      |||| ||| |||||| ||||||||||||| | |||| |||||||||    
22832739 ccaattgaatatcttatctttccttcattcatacccaattagtttgtt 22832786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 12103866 - 12103801
Alignment:
199 gtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||| | ||||||||||||||||||    
12103866 gtttgtttcctccgcttttgtggacttgtttcttttgatcatatctacaagtgttgttgaactgat 12103801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 15149692 - 15149601
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttga-atacttgataatgataaaaataatagtaattattattttt 99  Q
    |||||||||||||||||  ||| |||||||||||||    ||||||||||| | |||  |||||||||||||||||||||||||||||||||||    
15149692 ataaaatagaacacaca--ttaatagtgtttaaattaagatatttaatttttagatatctgataatgataaaaataatagtaattattattttt 15149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 4872910 - 4872734
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt-tttatttga 105  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||| |||||     |||||| ||||||||| ||||||||||| ||||||       
4872910 ataaaatagaacacacacaatagtagtgtttaaatagtgatatttaattttaaatac-----aatgatgaaaataataataattattattctttattcat 4872816  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
    | |||||| |  |||||| ||||| ||||| | |||| ||||||| | |||||  || | |||||| |||||||| ||||||    
4872815 ggatatcactccccataactttaggttatgtttgttgtgataagattgagaatccaactgaatttcctatatttcattcatt 4872734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 15413861 - 15413940
Alignment:
108 atatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
    |||||| || ||||||||||| |||| | |||||| |||||||||||||||| || | |||||| ||| |||||||||||    
15413861 atatcacttcccataaatttaacttacgttggttgtgataagaataagaattcaagtgaatttcctatctttccttcatt 15413940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 42625644 - 42625908
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgc-----agtatttaattttgaatacttgataatgataaaaataatagtaattattattttt 99  Q
    |||||||||||||| |||||||||||||||||||||||||     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
42625644 acataaaatagaactcacacattagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatgataaaaataatagtaattattattttt 42625743  T
100 atttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatag 199  Q
    ||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||    
42625744 attcgagaatatcactttccataaatttaacttatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcatttacatccaatag 42625843  T
200 tttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
42625844 tttatttcctccacttgtgtggatttatttcttttgatcctatccataagtgttgttaaactgat 42625908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 26342237 - 26341982
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |    
26342237 acataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatgataaaaataatagtaattattatttt-attcg 26342139  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||||||||||||| ||||||||||||||    
26342138 agaatatcactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatatttccttcattcaaatccaatagtttgt 26342042  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
26342041 ttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 26341982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 20 - 264
Target Start/End: Complemental strand, 12800405 - 12800161
Alignment:
20 cacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttcc 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||    
12800405 cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcgaaaatataactttcc 12800306  T
120 ataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgt 219  Q
    |||||||||| |||| |||||||  |||||||||||||||| ||| ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||    
12800305 ataaatttaggttatagtggttgtaataagaataagaattttattgaatttcttaaatttccttcattcaaatctaatagtttgtttccttcacttttgt 12800206  T
220 ggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
12800205 ggatttgtttcttttgatcctatccacaagtgttgttgaactgat 12800161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 3881001 - 3880739
Alignment:
5 acataaaatagaacacacacat---tagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttat 101  Q
    ||||||||||||||||||||||   |||||||| ||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
3881001 acataaaatagaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatgataaaaataatagtaattattatttttat 3880902  T
102 ttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtt 201  Q
    ||| |||||||| || |||||||||||||||||| | |||| ||||||||||| ||||||||| ||||||||||||||| |||||||| || ||||||||    
3880901 ttgtgaatatcacttcccataaatttagcttatgattgttgtgataagaataataatttaattgaatttcttatatttcattcattcaaattcaatagtt 3880802  T
202 tgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
3880801 tgtttcctccacttttgtggatttgtttcttttgatcctatccacaggtgttgttgaactgat 3880739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 4931252 - 4930998
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| || |||    
4931252 cataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-atctga 4931154  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||    || ||||||||| |||||||| |||||||||||||||    
4931153 gaatatcactttccataaatttagtttatggtggttgtgataagaataataatttaatta---ttattatatttcattcattcaaatccaatagtttgtt 4931057  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
4931056 acctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 4930998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 244
Target Start/End: Complemental strand, 12257052 - 12256812
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
12257052 acataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 12256953  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     |||||||| || ||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||| ||||||    
12256952 tgaatatcacttcccataaatttagcttatggtggttgtgataagaataggaattcaattgaatttcttatttttccttcattcaaatccaatgagtttg 12256853  T
204 tttcctccacttttgtggatttgtttcttttgatcctatcc 244  Q
    |||||||||||||||||||||||||||||||||||||||||    
12256852 tttcctccacttttgtggatttgtttcttttgatcctatcc 12256812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 23 - 264
Target Start/End: Complemental strand, 8269312 - 8269071
Alignment:
23 acattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccata 122  Q
    ||||||| |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
8269312 acattagaagtgtttaaactgcgatatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcgtgaatatcactttccata 8269213  T
123 aatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtttcctccacttttgtgga 222  Q
    |||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
8269212 aatttaacttatggtggttgtgataaggataagaatttaattaaatttcttatatttccttcattcaaatccaatagtttgtttcctccacttttgtgga 8269113  T
223 tttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
     | |||||||||||||| || || ||||||||||||||||||    
8269112 atcgtttcttttgatccaattcacaagtgttgttgaactgat 8269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 3046604 - 3046346
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | | ||| ||||||||| |    
3046604 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataataattactataatttttattcg 3046505  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     |||||||| || | ||||||||| ||||||||||||| |||||||||||||||| |||| ||| |||||| ||||||||||||| ||| ||| ||||||    
3046504 tgaatatcacttcctataaatttaacttatggtggttgtgataagaataagaattcaattgaatgtcttatctttccttcattcaaatctaatgagtttg 3046405  T
204 tttcctccacttttgtggatttgttt-cttttgatcctatccataagtgttgttgaact 261  Q
    ||||||||||||||||||||||||||  |||| ||  |||||| |||||||||||||||    
3046404 tttcctccacttttgtggatttgtttatttttaatattatccacaagtgttgttgaact 3046346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 10392155 - 10392416
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataata-gtaattattatttttattt 103  Q
    |||||||||||||||||||  |||  |||||||||||||| |||||||||||| ||||||||||||| ||||||| || | ||||||||||||||||||     
10392155 acataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataataataaaaaaaaaatgtaattattatttttattc 10392254  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agttt 202  Q
      |||||||| || |||||||||||| |||||||| ||| |||||||||||||||| |||| |||||||||| ||||||||||||| ||||||| |||||    
10392255 atgaatatcacttcccataaatttaggttatggtgattgtgataagaataagaattcaattgaatttcttatctttccttcattcaaatccaatgagttt 10392354  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||    
10392355 gtttcctccacttttgtggatttgtttcttttaattctatccacaagtgttattgaactgat 10392416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 12181818 - 12182088
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatag---taattattatttttat 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||   |||| ||| |||||||    
12181818 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaataatcattttttttat 12181917  T
102 ttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaat-----ttaatttaatttcttatatttccttcattcagatccaa 196  Q
    | | |||||||| || | ||||||||||||||||||||||| |||||||||||||||     || | || | |||||||||||||||| |||| ||||||    
12181918 tcgtgaatatcacttccaataaatttagcttatggtggttgtgataagaataagaataagaattcaattgaattcttatatttccttcgttcaaatccaa 12182017  T
197 t-agtttgtttcctccacttttgtggatttgtttc--ttttgatcctatccataagtgttgttgaactgat 264  Q
    | |||||||||||||||||||||||||||||||||  |||| ||| |||||| ||||||||||||||||||    
12182018 tgagtttgtttcctccacttttgtggatttgtttctttttttatcttatccacaagtgttgttgaactgat 12182088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 21672235 - 21671969
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |    
21672235 acataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatgataaaaataatagtaattattatttttattcg 21672136  T
105 agaatatcattttccataaatttagcttatggtggttgcg------ataagaataagaatttaatttaatttcttatatttccttcattcagatccaat- 197  Q
     |||||||| || |||| |||||| ||||||||||||| |      |||||||||||||||||||| ||||||||||||||| ||| |||| |||||||     
21672135 tgaatatcacttcccat-aatttaccttatggtggttgtgataagaataagaataagaatttaattgaatttcttatatttcattccttcaaatccaatg 21672037  T
198 agtttgtttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    |||| ||| ||| ||||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||    
21672036 agttagttcccttcacttttatggatttgtttcttttttatcttatccacaagtgttgttgaactgat 21671969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 7 - 261
Target Start/End: Original strand, 10387417 - 10387674
Alignment:
7 ataaaatagaacacacacattagtag-tgtttaaattgcagtatttaattttgaatacttgataatgataaa-aataatagtaattattatttttattt- 103  Q
    ||||||||||||||||| ||||| || |||||||||||  |||||||||||| |||| |||||||||||||| || ||||||  ||||||||||| |||     
10387417 ataaaatagaacacacatattagcaggtgtttaaattgtggtatttaattttaaatatttgataatgataaagaaaaatagtt-ttattatttttttttc 10387515  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agttt 202  Q
    | |||||||| || |||||||||||||||||||| |||| |||||||||||||||| |||| |||||||||| ||| ||||||||| ||||||  |||||    
10387516 gtgaatatcacttcccataaatttagcttatggttgttgtgataagaataagaattcaattgaatttcttatcttttcttcattcaaatccaacgagttt 10387615  T
203 gtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaact 261  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
10387616 gtttcctccacttttgtgaatttgtttcttttgatcctatccacaagtgttgttgaact 10387674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 76 - 264
Target Start/End: Complemental strand, 27239114 - 27238926
Alignment:
76 aaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttat 175  Q
    ||||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||    
27239114 aaaataatagtaattattatttttattcgtgaatatcacttcccataaatttagcttatggttgttgtgataacaataagaatttaattgaatttcttat 27239015  T
176 atttccttcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||    
27239014 atttcattcattcaaattcaatagtttgtttcctccacttttgtggatttgtttcgtttggtcatatccacaagtgttgttgaactgat 27238926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 264
Target Start/End: Complemental strand, 2595778 - 2595598
Alignment:
83 tagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttcct 182  Q
    ||||||||||| |||||||| |||||||||| || ||||||| |||||||||||||| || |||||||| |||||||||||| |||||||||||||| ||    
2595778 tagtaattattctttttattcgagaatatcacttcccataaacttagcttatggtggctgtgataagaaaaagaatttaattgaatttcttatattttct 2595679  T
183 tcattcagatccaatagtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
2595678 tcattcaaatctaatag-ttgtttcctccacttttgtggatttgtttcttttgatcctatccacaagtgttgttgaactgat 2595598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 27246614 - 27246873
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||  ||| |||||||||||||||  |||||| |  | |||||||||||||||||||| ||||| | ||||||||||||||| |    
27246614 acataaaatagaacacaca--ttaatagtgtttaaattgcgctatttattcataaatacttgataatgataaaactaataatcattattatttttattcg 27246711  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     | |||||| ||  ||||||||||||||||| |||||||||||| |||||||||||||   |||||| ||| |||| |||||||| ||||||| ||||||    
27246712 tggatatcacttctcataaatttagcttatgttggttgcgataaaaataagaatttaagcgaatttcctatctttctttcattcatatccaataagtttg 27246811  T
204 tttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||| ||| |||| ||| |||||  | ||||||||||||||||    
27246812 tttcctccacttttgtggatttgcttcttttttatcttatccgcatgtgttgttgaactgat 27246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 25 - 232
Target Start/End: Original strand, 6590099 - 6590307
Alignment:
25 attagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaa 124  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||| | | ||||||||| |||||||    
6590099 attagtagtgtttaaattgtattatttaattttaaatacttgataaagctaaaaataatagtcattattatttttattcgtggatatcatttcccataaa 6590198  T
125 tttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtttcctccacttttgtggat 223  Q
    ||||| ||||  | |||| ||||||||||| ||||||| | |||||  ||| |||| |||||||| ||||||| | |||||||||||| |||||||||||    
6590199 tttagtttatatttgttgtgataagaataaaaatttaactgaattttctatctttctttcattcatatccaatgaatttgtttcctccccttttgtggat 6590298  T
224 ttgtttctt 232  Q
    |||||||||    
6590299 ttgtttctt 6590307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 9814938 - 9815206
Alignment:
2 ccaacataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattattttta 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| || ||||||||||| || |||||||||||||||||||||||||    
9814938 ccaacataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataatagtaattattattttta 9815037  T
101 tttgagaatatcattttccataaatttagcttatggtggttgcgataagaataa--gaatttaatttaatttcttatatttccttcattcagatccaat- 197  Q
    ||    ||||||| ||  ||||||||||||||| | |||||| |||||||||||  ||||| ||   | |||| ||| ||| ||||||||| |||||||     
9815038 ttcatcaatatcacttctcataaatttagcttacgttggttgtgataagaataaaagaattcaaccaagtttcctatttttacttcattcatatccaatg 9815137  T
198 agtttgtttcctccacttttgtggatttgtttcttttg--atcctatccataagtgttgttgaactgat 264  Q
    || ||||||||| ||||| ||||  ||||||||||||   ||| ||  || ||||||||||||||||||    
9815138 agcttgtttcctacacttatgtgcgtttgtttctttttttatcttagtcacaagtgttgttgaactgat 9815206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 10716863 - 10717131
Alignment:
2 ccaacataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaa-tacttgataatgataaaaataatagtaattattattttta 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| || ||||||||||| || |||||||||||||||||||||||||    
10716863 ccaacataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataatagtaattattattttta 10716962  T
101 tttgagaatatcattttccataaatttagcttatggtggttgcgataagaataa--gaatttaatttaatttcttatatttccttcattcagatccaat- 197  Q
    ||    ||||||| ||  ||||||||||||||| | |||||| |||||||||||  ||||| ||   | |||| ||| ||| ||||||||| |||||||     
10716963 ttcatcaatatcacttctcataaatttagcttacgttggttgtgataagaataaaagaattcaaccaagtttcctatttttacttcattcatatccaatg 10717062  T
198 agtttgtttcctccacttttgtggatttgtttcttttg--atcctatccataagtgttgttgaactgat 264  Q
    || ||||||||| ||||| ||||  ||||||||||||   ||| ||  || ||||||||||||||||||    
10717063 agcttgtttcctacacttatgtgcgtttgtttctttttttatcttagtcacaagtgttgttgaactgat 10717131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 23247877 - 23248018
Alignment:
76 aaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttat 175  Q
    ||||||||||||||||||||||||||| |  ||||||| || ||||||||| ||||||||||| ||| ||||||||||| ||||||||| ||||| ||||    
23247877 aaaataatagtaattattatttttattcgtaaatatcacttcccataaattgagcttatggtgattgtgataagaataaaaatttaattgaattttttat 23247976  T
176 atttccttcattcagatccaatagtttgtttcctccactttt 217  Q
    ||||| ||| |||| || ||||||||||||||||||||||||    
23247977 atttcattcgttcaaattcaatagtttgtttcctccactttt 23248018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 16373364 - 16373248
Alignment:
19 acacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttc 118  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||| ||||||||||||||| | | |||||| ||||    
16373364 acacacattagtagtgtttaaattgcagtagttaattttaaatacctgataacgataaaaataatagtcattattatttttattcgtgtatatcactttc 16373265  T
119 cataaatttagcttatg 135  Q
    |||||||||||||||||    
16373264 cataaatttagcttatg 16373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 23152177 - 23152308
Alignment:
48 atttaattttgaatacttgataatgataaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgata 147  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||||||||||    |||||||||||||||||||||||| ||||| || ||  ||||    
23152177 atttaattttaaaaacttgataatgataaaaataataattattattatttttatccatgaatatcattttccataaatttagtttatgatgattatgata 23152276  T
148 agaataagaatttaatttaatttcttatattt 179  Q
    ||||||||||||||||| ||||||||||||||    
23152277 agaataagaatttaattgaatttcttatattt 23152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 44509585 - 44509674
Alignment:
74 taaaaataatagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatt 164  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||    
44509585 taaaaataatagtaattattatttt-atttgagaatatcactttccataaatttagcttacggtggttgtgataagaataataatttaatt 44509674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 13313380 - 13313474
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattattttt 99  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||| |||||||||  ||||||| |||||    
13313380 acataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaatacttgataatgatgaaaataataacaattatttttttt 13313474  T

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Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 26286224 - 26286315
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatt 96  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||  |||||||||| ||||||||| | |||||||||    
26286224 acataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaataactgataatgatgaaaataataattattattatt 26286315  T

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Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 23247627 - 23247701
Alignment:
8 taaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataa 82  Q
    |||||||||| ||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
23247627 taaaatagaaaacaaacattagtagtgtttaaattacggtatttaattttaaatacttgataatgataaaaataa 23247701  T

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Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 238
Target Start/End: Complemental strand, 15973753 - 15973519
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtattt--aattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    ||||||||||||||||||||||||||||| |||| |||   ||||||  | |||| |||||  |||||||||||||||||||||||  ||| | ||||||    
15973753 acataaaatagaacacacacattagtagtatttatattatggtattttaatttttaaataccggataatgataaaaataatagtaa--attttctttatt 15973656  T
103 tgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaa-tagtt 201  Q
    || | |||| | || |||||| ||||| ||||| |||||| ||||||| | | |||  |||| || ||| ||| ||| ||||||| | ||| || ||| |    
15973655 tgtgcatataacttcccataattttagtttatgttggttgtgataagactgaaaatacaattgaacttcctatcttttcttcatttatatctaattagat 15973556  T
202 tgtttcctccacttttgtggatttgtttcttttgatc 238  Q
     |||||||||| |||| ||| || |||||||||||||    
15973555 agtttcctccaattttatgggttagtttcttttgatc 15973519  T

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Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 4580493 - 4580398
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatt 102  Q
    |||||||||||||||||||||||||||||||| || |  |||||||||| | ||||| |||||||||| ||||| ||  | ||||||||| |||||    
4580493 ataaaatagaacacacacattagtagtgtttatatagtggtatttaattctaaatacctgataatgatgaaaattattattattattattattatt 4580398  T

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Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 264
Target Start/End: Complemental strand, 23319870 - 23319693
Alignment:
83 tagtaattattatttttatttgagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttat-atttcc 181  Q
    |||||||||||| ||||||| | | |||||| || |||||||||| | ||||| |||||| || |||||||||| || || | | |||| |||  |||||    
23319870 tagtaattattacttttattcgtggatatcacttgccataaatttggtttatgttggttgtgacaagaataagagttcaactgagtttcctatcttttcc 23319771  T
182 ttcattcagatccaat-agtttgtttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||| ||||||| |||||||||||||       |||  ||||||| |||| ||| |||||| ||||||||||||||||||    
23319770 ttcattcatatccaatgagtttgtttcctc------agtgagtttgtttttttttatcttatccacaagtgttgttgaactgat 23319693  T

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Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 16373246 - 16373166
Alignment:
186 ttcagatccaat-agtttgtttcctccacttttgtggatttgtttctttt-gatcctatccataagtgttgttgaactgat 264  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||||||||| |||| |||||| |||||||| | |||||||    
16373246 ttcacatccaatgagtttgtttcctctacttttgtggttttgtttcttttggatcttatccacaagtgttgctaaactgat 16373166  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 44508364 - 44508400
Alignment:
7 ataaaatagaacacacacattagtagtgtttaaattg 43  Q
    ||||||||||||||||| |||||||||||||||||||    
44508364 ataaaatagaacacacatattagtagtgtttaaattg 44508400  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 44508427 - 44508472
Alignment:
37 taaattgcagtatttaattttgaatacttgataatgataaaaataa 82  Q
    |||||||  |||||||||||| |||| |||||||||||||||||||    
44508427 taaattgtggtatttaattttaaatatttgataatgataaaaataa 44508472  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 23151753 - 23151792
Alignment:
6 cataaaatagaacacacacat--tagtagtgtttaaattg 43  Q
    |||||||||||||||||||||  |||||||||||||||||    
23151753 cataaaatagaacacacacatattagtagtgtttaaattg 23151792  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30259292 - 30259240
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaatttt 57  Q
    |||||||||||| |||| ||||||||||||||||||| |   |||||||||||    
30259292 acataaaatagatcacatacattagtagtgtttaaatagtgatatttaatttt 30259240  T

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Target: scaffold0054 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 30207 - 29950
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |    
30207 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatgataaaaataatagtaattattatttttattcg 30108  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    ||||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || | |||||||| |||||    
30107 agaatatcacttcccataaatttagtttatggtggttgtgataagaataagaatttaattgaatttcttatatttccttcgttgaaatccaataatttgt 30008  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    || ||| |||||||||||||||||| |||| |||||||||| ||||||||||||| ||||    
30007 tt-ctctacttttgtggatttgttt-tttttatcctatccacaagtgttgttgaattgat 29950  T

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Target: scaffold0054; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 26471 - 26288
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattatt-atttttattt 103  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||| ||||||| || ||||||||  | |||||| || ||||||     
26471 acataaaatagaacacacacattagtagtgtttaaatagaggtatttaattttaaatacctgataataatgaaaataattattattattaatatttattc 26372  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcatt 187  Q
      | |||||| ||||||||| ||||| ||||| | |||| ||||||| | |||||  || | |||||  ||| |||||||||||    
26371 atggatatcactttccataattttaggttatgtttgttgtgataagattgagaatccaactgaattttctatctttccttcatt 26288  T

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Target: scaffold0002 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 5093 - 4839
Alignment:
6 cataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttga 105  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||    
5093 cataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt-attaga 4995  T
106 gaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgtt 205  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||||| |||||||||    || |||||||| ||||||||| ||||||||||||| |    
4994 gaatattactttccataaatttagcttatggtggttgtgataagaataataatttaatta---ttattatattttcttcattcaaatccaatagtttggt 4898  T
206 tcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
4897 tcctccacttttgtggatttgtttcctttgatcctatccacaagtgttgttgaactgat 4839  T

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Target: scaffold0002; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 443005 - 443263
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||||||||||||||| | ||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |    
443005 acataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatgataaaaataatagtaattattatttttattag 443104  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
    |||||||||||||| ||||||||| |||||| |||||| ||||| ||||| | ||||||| |||||||||||||||||||||||| ||||||||||||||    
443105 agaatatcattttcaataaatttaacttatgatggttgtgataaaaataatagtttaattaaatttcttatatttccttcattcaaatccaatagtttgt 443204  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| ||||| | |||||||| | | ||||||| |||||||||||||||||||||||||    
443205 ttccttcacttgtatggatttg-tacctttgatcttatccataagtgttgttgaactgat 443263  T

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Target: scaffold0352 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 8139 - 7885
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaa-taatagtaattattatttttattt 103  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||     
8139 acataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaaataatagtaattattatttt-attc 8041  T
104 gagaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttg 203  Q
    |||||||||| ||| |||||||||||||||||| ||||| ||||||||||| |||||||||    || ||||||||| |||||||| |||||||||||||    
8040 gagaatatcacttttcataaatttagcttatggcggttgtgataagaataataatttaatta---ttattatatttcattcattcaaatccaatagtttg 7944  T
204 tttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactg 262  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
7943 tttcctccactattgtggatttgtttcttttgatcctatccacaagtgttgttgaactg 7885  T

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Target: scaffold0057 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 36152 - 35899
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||||||||||| ||| ||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
36152 acataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatgataaaaataatagtaattattatttttatttg 36053  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaatagtttgt 204  Q
     |||||||| || ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||    
36052 tgaatatcacttcccataaatttagc-tatggtggttgtgataagaataagaatttaattaaatttcttatatttccttcatttaaatctaatagtttgt 35954  T
205 ttcctccacttttgtggatttgtttcttttgatcctatccataagtgttgttgaactgat 264  Q
    |||||||| |||    ||||||||| ||||||||||||||| ||||||||||||| ||||    
35953 ttcctccatttt----gatttgttt-ttttgatcctatccacaagtgttgttgaaatgat 35899  T

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Target: scaffold0690 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 6262 - 6001
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgataaaaataatagtaattattatttttatttg 104  Q
    |||||| |||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
6262 acataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattcg 6163  T
105 agaatatcattttccataaatttagcttatggtggttgcgataagaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttg 203  Q
     |||||||| || ||||||||||||||||||| ||||| |||||||||||||||| |  | |||||||||| ||||||||||||| ||| ||| ||||||    
6162 tgaatatcacttcccataaatttagcttatggaggttgtgataagaataagaattcacctaaatttcttatctttccttcattcaaatcaaatgagtttg 6063  T
204 tttcctccacttttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||||||||||||||||||||||||| |||| | | |||||| ||||||||||||||||||    
6062 tttcctccacttttgtggatttgtttcttttttaccttatccacaagtgttgttgaactgat 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 4988 - 4748
Alignment:
19 acacacattagtagtgtttaaattgcagtatttaattttgaatacttgataatgata-aaaataatagtaattattatttttatttgagaatatcatttt 117  Q
    ||||| |||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| ||     
4988 acacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatgataaaaaataatagtaattattatttttattcgtgaatatcacttc 4889  T
118 ccataaatttagcttatggtggttgcgata-agaataagaatttaatttaatttcttatatttccttcattcagatccaat-agtttgtttcctccactt 215  Q
    |||||||||||| ||||  ||  | | ||| | |||||    |||    |||||||||||||||||  |||||  |||||| |||| ||||||||| |||    
4888 ccataaatttagtttat--tgaataccatataaaataa----tta---gaatttcttatatttcctgtattcaattccaatgagttcgtttcctcctctt 4798  T
216 ttgtggatttgtttc-ttttgatcctatccataagtgttgttgaactgat 264  Q
    ||||| ||||||||| |||| ||| |||||| ||||||||||||||||||    
4797 ttgtgaatttgtttctttttaatcttatccacaagtgttgttgaactgat 4748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 3904 - 3948
Alignment:
40 attgcagtatttaattttgaatacttgataatgataaaaataata 84  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||    
3904 attgcggtatttaatttcaaatacttgataatgataaaaataata 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 64960 - 64996
Alignment:
5 acataaaatagaacacacacattagtagtgtttaaat 41  Q
    ||||||||||||||||||||||||||||| |||||||    
64960 acataaaatagaacacacacattagtagtctttaaat 64996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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