View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0197_1D_low_21 (Length: 213)

Name: NF0197_1D_low_21
Description: NF0197_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0197_1D_low_21
NF0197_1D_low_21
[»] chr8 (36 HSPs)
chr8 (42-204)||(12123970-12124138)
chr8 (22-89)||(34897068-34897135)
chr8 (22-90)||(27213529-27213597)
chr8 (22-80)||(24362211-24362269)
chr8 (22-80)||(39954288-39954346)
chr8 (22-87)||(31236586-31236651)
chr8 (22-80)||(13844605-13844663)
chr8 (22-71)||(12606838-12606887)
chr8 (23-71)||(4611535-4611583)
chr8 (22-80)||(4786347-4786405)
chr8 (22-71)||(14731713-14731762)
chr8 (34-71)||(18067955-18067992)
chr8 (22-75)||(20785474-20785527)
chr8 (26-66)||(3025557-3025597)
chr8 (25-77)||(7658458-7658510)
chr8 (25-65)||(14134706-14134746)
chr8 (32-80)||(27101507-27101555)
chr8 (22-90)||(31109527-31109595)
chr8 (54-89)||(126390-126425)
chr8 (22-77)||(11927095-11927150)
chr8 (23-66)||(12559116-12559159)
chr8 (27-70)||(37283824-37283867)
chr8 (22-64)||(11803267-11803309)
chr8 (25-71)||(14634153-14634199)
chr8 (37-71)||(18069155-18069189)
chr8 (22-79)||(11944658-11944715)
chr8 (26-71)||(20679408-20679453)
chr8 (37-90)||(22651958-22652011)
chr8 (25-90)||(24447011-24447076)
chr8 (22-75)||(34222944-34222997)
chr8 (22-71)||(36934671-36934720)
chr8 (26-90)||(926801-926865)
chr8 (28-80)||(4673440-4673492)
chr8 (25-65)||(13203648-13203688)
chr8 (23-71)||(29776037-29776085)
chr8 (28-80)||(30077402-30077454)
[»] chr1 (64 HSPs)
chr1 (22-97)||(12443469-12443544)
chr1 (22-91)||(6427331-6427400)
chr1 (26-80)||(36878453-36878507)
chr1 (22-71)||(38503321-38503370)
chr1 (26-90)||(398778-398842)
chr1 (34-90)||(2896142-2896198)
chr1 (17-80)||(25098559-25098622)
chr1 (23-97)||(40181848-40181920)
chr1 (22-80)||(10233245-10233303)
chr1 (22-80)||(17831540-17831598)
chr1 (22-80)||(36905989-36906047)
chr1 (22-67)||(11605944-11605989)
chr1 (26-90)||(1486722-1486786)
chr1 (22-90)||(9709802-9709870)
chr1 (39-83)||(21530678-21530722)
chr1 (26-90)||(34298418-34298482)
chr1 (22-65)||(7918220-7918263)
chr1 (22-77)||(25361881-25361936)
chr1 (22-64)||(1864889-1864931)
chr1 (22-80)||(9828036-9828094)
chr1 (34-80)||(10474998-10475044)
chr1 (22-80)||(10572598-10572656)
chr1 (21-71)||(19324563-19324613)
chr1 (22-80)||(19562630-19562688)
chr1 (28-98)||(22515902-22515972)
chr1 (34-80)||(40285675-40285721)
chr1 (22-68)||(44482234-44482280)
chr1 (28-90)||(46348398-46348460)
chr1 (24-77)||(5898277-5898330)
chr1 (34-71)||(9629921-9629958)
chr1 (22-79)||(13436451-13436508)
chr1 (23-80)||(14332652-14332709)
chr1 (25-66)||(16927197-16927238)
chr1 (22-71)||(20157359-20157408)
chr1 (27-80)||(25452162-25452215)
chr1 (22-71)||(34371715-34371763)
chr1 (22-79)||(52903242-52903299)
chr1 (28-80)||(113291-113343)
chr1 (28-76)||(31015039-31015087)
chr1 (37-80)||(1262876-1262919)
chr1 (28-79)||(5376515-5376566)
chr1 (39-90)||(5927366-5927417)
chr1 (22-69)||(27471575-27471622)
chr1 (25-80)||(28674792-28674847)
chr1 (22-77)||(39953155-39953210)
chr1 (32-90)||(2851004-2851061)
chr1 (23-65)||(12707883-12707925)
chr1 (22-80)||(13997875-13997933)
chr1 (22-80)||(17754303-17754361)
chr1 (34-72)||(19909297-19909335)
chr1 (34-80)||(42325552-42325598)
chr1 (28-90)||(48450602-48450664)
chr1 (22-71)||(17425102-17425151)
chr1 (22-71)||(23738679-23738728)
chr1 (34-71)||(26238133-26238170)
chr1 (22-83)||(29163390-29163451)
chr1 (28-77)||(41877485-41877534)
chr1 (22-90)||(6415010-6415078)
chr1 (27-90)||(9033021-9033085)
chr1 (35-83)||(9449030-9449078)
chr1 (22-90)||(16252895-16252963)
chr1 (22-66)||(34712392-34712436)
chr1 (46-90)||(40917733-40917777)
chr1 (22-66)||(49872843-49872887)
[»] chr6 (59 HSPs)
chr6 (22-80)||(7265602-7265660)
chr6 (22-85)||(19040339-19040402)
chr6 (22-80)||(30866153-30866211)
chr6 (25-90)||(9658861-9658926)
chr6 (24-80)||(7996389-7996445)
chr6 (24-80)||(8022356-8022412)
chr6 (22-90)||(9027160-9027228)
chr6 (22-90)||(9629365-9629433)
chr6 (22-80)||(26562681-26562739)
chr6 (24-90)||(34073358-34073424)
chr6 (22-83)||(7377968-7378029)
chr6 (22-71)||(9025503-9025552)
chr6 (26-90)||(3398601-3398664)
chr6 (23-83)||(13360382-13360442)
chr6 (22-90)||(13851718-13851786)
chr6 (22-77)||(7151407-7151462)
chr6 (22-77)||(21924944-21924999)
chr6 (27-74)||(31579239-31579286)
chr6 (29-80)||(34447374-34447425)
chr6 (22-80)||(5732519-5732577)
chr6 (26-80)||(7938108-7938162)
chr6 (22-80)||(10842524-10842582)
chr6 (22-80)||(13364714-13364772)
chr6 (26-80)||(17341677-17341731)
chr6 (22-80)||(20371119-20371177)
chr6 (22-71)||(1532241-1532290)
chr6 (22-67)||(24832593-24832638)
chr6 (22-87)||(32298616-32298681)
chr6 (26-71)||(32511679-32511724)
chr6 (22-66)||(7086801-7086845)
chr6 (23-71)||(7723260-7723308)
chr6 (28-80)||(10770689-10770741)
chr6 (28-80)||(16766689-16766741)
chr6 (48-80)||(21395342-21395374)
chr6 (35-90)||(5000648-5000703)
chr6 (28-87)||(7977845-7977904)
chr6 (26-65)||(8389485-8389524)
chr6 (22-69)||(9617437-9617484)
chr6 (22-80)||(10339134-10339193)
chr6 (41-80)||(21424830-21424869)
chr6 (25-71)||(5462687-5462733)
chr6 (22-60)||(11591879-11591917)
chr6 (28-90)||(12696306-12696368)
chr6 (34-80)||(17168484-17168530)
chr6 (28-90)||(17841604-17841666)
chr6 (22-80)||(19044456-19044514)
chr6 (34-80)||(19602202-19602248)
chr6 (22-64)||(21142126-21142168)
chr6 (22-80)||(33001298-33001356)
chr6 (25-74)||(2040609-2040658)
chr6 (22-79)||(8931611-8931668)
chr6 (22-71)||(10888983-10889032)
chr6 (40-80)||(677829-677869)
chr6 (26-86)||(2117062-2117122)
chr6 (26-74)||(7569181-7569229)
chr6 (22-90)||(10294089-10294157)
chr6 (22-62)||(17411877-17411917)
chr6 (23-71)||(24138427-24138475)
chr6 (28-80)||(34595126-34595178)
[»] chr3 (54 HSPs)
chr3 (22-80)||(8039844-8039902)
chr3 (26-80)||(8383249-8383303)
chr3 (26-95)||(5407260-5407329)
chr3 (23-97)||(12703982-12704056)
chr3 (26-90)||(14840304-14840368)
chr3 (22-80)||(10455782-10455840)
chr3 (22-71)||(7928451-7928500)
chr3 (34-86)||(11610507-11610559)
chr3 (26-74)||(17005632-17005680)
chr3 (34-89)||(23870580-23870635)
chr3 (22-65)||(29508451-29508494)
chr3 (22-69)||(49505163-49505210)
chr3 (25-71)||(10690274-10690320)
chr3 (22-80)||(16192759-16192817)
chr3 (25-71)||(29112292-29112338)
chr3 (22-80)||(32804549-32804607)
chr3 (22-83)||(8789559-8789620)
chr3 (22-71)||(11313809-11313858)
chr3 (28-97)||(14832074-14832143)
chr3 (34-79)||(25652052-25652097)
chr3 (26-71)||(34307793-34307838)
chr3 (28-80)||(4987306-4987358)
chr3 (24-80)||(11493372-11493428)
chr3 (28-80)||(15796309-15796361)
chr3 (26-77)||(1550135-1550186)
chr3 (21-80)||(4466608-4466667)
chr3 (25-80)||(4469842-4469897)
chr3 (24-71)||(9624642-9624689)
chr3 (27-66)||(11251984-11252023)
chr3 (22-98)||(45451523-45451603)
chr3 (28-97)||(1509511-1509583)
chr3 (28-90)||(4990982-4991044)
chr3 (39-89)||(5339091-5339141)
chr3 (22-80)||(11658807-11658865)
chr3 (28-90)||(26492220-26492282)
chr3 (28-86)||(26508096-26508154)
chr3 (28-90)||(28917983-28918045)
chr3 (26-80)||(32429393-32429447)
chr3 (23-80)||(1438796-1438853)
chr3 (25-74)||(4201394-4201443)
chr3 (27-80)||(5441045-5441098)
chr3 (22-71)||(13620773-13620822)
chr3 (29-78)||(14979175-14979224)
chr3 (29-90)||(21720746-21720807)
chr3 (27-80)||(24633758-24633811)
chr3 (27-80)||(25064901-25064954)
chr3 (22-79)||(25093495-25093552)
chr3 (22-94)||(13799482-13799554)
chr3 (24-68)||(15812832-15812876)
chr3 (28-80)||(21479110-21479162)
chr3 (26-90)||(24205054-24205118)
chr3 (26-66)||(25948900-25948940)
chr3 (27-71)||(27277852-27277896)
chr3 (28-80)||(34910309-34910361)
[»] chr4 (46 HSPs)
chr4 (22-98)||(16189682-16189759)
chr4 (22-80)||(36635316-36635374)
chr4 (26-99)||(8423731-8423802)
chr4 (22-80)||(40613442-40613500)
chr4 (22-71)||(3712518-3712567)
chr4 (22-71)||(22440609-22440658)
chr4 (23-87)||(35952627-35952691)
chr4 (27-71)||(56257934-56257978)
chr4 (23-70)||(903924-903971)
chr4 (22-80)||(35723393-35723452)
chr4 (27-69)||(16184820-16184862)
chr4 (22-67)||(999357-999402)
chr4 (26-79)||(1747205-1747258)
chr4 (23-72)||(6863153-6863202)
chr4 (21-90)||(13783263-13783332)
chr4 (22-104)||(15659769-15659855)
chr4 (25-90)||(30522927-30522992)
chr4 (22-71)||(56488519-56488568)
chr4 (34-90)||(7012048-7012104)
chr4 (25-65)||(37698719-37698759)
chr4 (23-58)||(8402752-8402787)
chr4 (22-77)||(40742586-40742641)
chr4 (22-64)||(5775367-5775409)
chr4 (24-98)||(7214533-7214606)
chr4 (22-80)||(9299064-9299121)
chr4 (22-80)||(15029757-15029815)
chr4 (26-80)||(24343499-24343553)
chr4 (28-74)||(29205442-29205488)
chr4 (26-90)||(30982891-30982952)
chr4 (29-71)||(38148741-38148783)
chr4 (23-69)||(39035938-39035983)
chr4 (20-90)||(44796969-44797039)
chr4 (23-56)||(7970535-7970568)
chr4 (28-77)||(11596367-11596416)
chr4 (22-71)||(12047397-12047445)
chr4 (35-80)||(23293008-23293053)
chr4 (22-71)||(26504308-26504357)
chr4 (23-63)||(9996849-9996889)
chr4 (22-78)||(13134444-13134500)
chr4 (22-62)||(18576046-18576086)
chr4 (30-90)||(20521866-20521926)
chr4 (27-63)||(21873385-21873421)
chr4 (27-63)||(21929246-21929282)
chr4 (22-89)||(22234899-22234967)
chr4 (37-69)||(34200295-34200327)
chr4 (28-80)||(38847027-38847079)
[»] chr2 (38 HSPs)
chr2 (29-98)||(22084848-22084917)
chr2 (22-90)||(21616744-21616812)
chr2 (22-80)||(39279667-39279725)
chr2 (22-90)||(23718008-23718076)
chr2 (22-90)||(24105680-24105748)
chr2 (26-85)||(18420447-18420506)
chr2 (22-69)||(34691814-34691861)
chr2 (22-69)||(34714226-34714273)
chr2 (23-77)||(28677904-28677958)
chr2 (22-80)||(37411253-37411311)
chr2 (27-80)||(21782832-21782885)
chr2 (22-71)||(44860321-44860370)
chr2 (22-90)||(16069263-16069331)
chr2 (24-71)||(24975336-24975383)
chr2 (22-64)||(30527604-30527646)
chr2 (26-80)||(31018582-31018636)
chr2 (22-80)||(31808069-31808127)
chr2 (22-80)||(35449505-35449563)
chr2 (22-71)||(18276522-18276571)
chr2 (35-71)||(1327979-1328015)
chr2 (37-89)||(27084245-27084297)
chr2 (27-79)||(28412343-28412395)
chr2 (26-82)||(42832289-42832345)
chr2 (22-65)||(5367199-5367242)
chr2 (34-80)||(2331786-2331832)
chr2 (22-72)||(2665897-2665947)
chr2 (22-68)||(18889600-18889646)
chr2 (26-80)||(19573970-19574024)
chr2 (28-90)||(20539689-20539751)
chr2 (28-90)||(24894371-24894433)
chr2 (28-90)||(30404865-30404927)
chr2 (28-65)||(12940950-12940987)
chr2 (22-71)||(29970558-29970607)
chr2 (26-71)||(31456654-31456699)
chr2 (24-80)||(2423861-2423917)
chr2 (26-70)||(25846743-25846787)
chr2 (27-79)||(31284041-31284093)
chr2 (23-75)||(36281682-36281734)
[»] chr5 (47 HSPs)
chr5 (22-90)||(34879332-34879400)
chr5 (22-80)||(3966495-3966553)
chr5 (22-80)||(27144455-27144513)
chr5 (26-80)||(28588687-28588741)
chr5 (22-72)||(30502397-30502447)
chr5 (22-72)||(30542740-30542790)
chr5 (22-71)||(6471898-6471947)
chr5 (22-90)||(15410457-15410525)
chr5 (40-80)||(17123040-17123080)
chr5 (47-91)||(38816729-38816773)
chr5 (25-80)||(6035475-6035529)
chr5 (25-80)||(12927646-12927701)
chr5 (22-98)||(39205848-39205930)
chr5 (26-80)||(7997179-7997233)
chr5 (22-80)||(12264838-12264896)
chr5 (28-78)||(27932229-27932279)
chr5 (22-80)||(32630744-32630802)
chr5 (28-98)||(7677677-7677749)
chr5 (28-77)||(21576760-21576809)
chr5 (22-71)||(36838544-36838593)
chr5 (22-71)||(41091266-41091315)
chr5 (25-69)||(17593734-17593778)
chr5 (22-66)||(23012417-23012461)
chr5 (24-80)||(35017029-35017085)
chr5 (22-61)||(24273039-24273078)
chr5 (22-61)||(24389136-24389175)
chr5 (26-90)||(25888306-25888372)
chr5 (21-64)||(33035809-33035852)
chr5 (26-80)||(5467991-5468045)
chr5 (28-90)||(6326312-6326374)
chr5 (22-80)||(11685931-11685989)
chr5 (28-90)||(14674251-14674313)
chr5 (28-90)||(19579683-19579745)
chr5 (44-90)||(19820425-19820471)
chr5 (28-90)||(21191071-21191133)
chr5 (26-64)||(25863212-25863250)
chr5 (23-69)||(26312772-26312818)
chr5 (25-62)||(10022642-10022679)
chr5 (22-71)||(16203804-16203853)
chr5 (22-71)||(18421850-18421899)
chr5 (37-86)||(22611761-22611810)
chr5 (25-90)||(28262408-28262473)
chr5 (22-71)||(32766952-32767001)
chr5 (28-89)||(39698524-39698585)
chr5 (28-80)||(6247614-6247666)
chr5 (28-80)||(24906316-24906368)
chr5 (28-80)||(31084315-31084367)
[»] chr7 (56 HSPs)
chr7 (22-80)||(32308112-32308170)
chr7 (46-99)||(8046060-8046113)
chr7 (22-97)||(5548646-5548726)
chr7 (27-79)||(29787383-29787435)
chr7 (22-80)||(20549783-20549841)
chr7 (22-80)||(22868034-22868092)
chr7 (22-79)||(19206043-19206100)
chr7 (26-98)||(1400999-1401071)
chr7 (22-69)||(17851434-17851481)
chr7 (46-89)||(20545269-20545312)
chr7 (22-80)||(3520351-3520409)
chr7 (22-80)||(6630921-6630979)
chr7 (36-90)||(11722121-11722175)
chr7 (22-80)||(22602719-22602777)
chr7 (23-77)||(23191891-23191945)
chr7 (28-90)||(27945023-27945085)
chr7 (29-78)||(30731031-30731080)
chr7 (22-71)||(32287472-32287521)
chr7 (27-67)||(2424619-2424659)
chr7 (22-86)||(2425742-2425806)
chr7 (22-86)||(2948669-2948733)
chr7 (22-90)||(3142087-3142155)
chr7 (28-80)||(24339634-24339686)
chr7 (28-80)||(25481894-25481946)
chr7 (22-90)||(26733286-26733354)
chr7 (25-80)||(5235978-5236033)
chr7 (22-77)||(5835242-5835297)
chr7 (22-89)||(9482917-9482984)
chr7 (27-66)||(12289120-12289159)
chr7 (21-64)||(16341504-16341547)
chr7 (22-81)||(23128670-23128729)
chr7 (24-71)||(27093424-27093471)
chr7 (24-71)||(27184830-27184877)
chr7 (28-79)||(28155563-28155614)
chr7 (37-80)||(45056925-45056968)
chr7 (22-80)||(1433446-1433504)
chr7 (22-64)||(8239059-8239101)
chr7 (24-90)||(10377489-10377555)
chr7 (27-69)||(14729704-14729746)
chr7 (34-80)||(21141003-21141049)
chr7 (24-98)||(21568633-21568707)
chr7 (22-80)||(22484017-22484075)
chr7 (22-80)||(26329391-26329449)
chr7 (22-71)||(8160417-8160466)
chr7 (27-64)||(11890933-11890970)
chr7 (28-65)||(13300417-13300454)
chr7 (26-71)||(19992002-19992047)
chr7 (34-79)||(24289813-24289858)
chr7 (22-71)||(33384591-33384640)
chr7 (22-71)||(42720899-42720948)
chr7 (34-90)||(2034423-2034479)
chr7 (22-66)||(3721099-3721143)
chr7 (22-66)||(7328700-7328744)
chr7 (22-74)||(12278833-12278885)
chr7 (22-90)||(21828414-21828482)
chr7 (26-90)||(43249975-43250039)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-80)||(90835-90890)
[»] scaffold0123 (1 HSPs)
scaffold0123 (22-71)||(44534-44583)
[»] scaffold0004 (1 HSPs)
scaffold0004 (28-89)||(92790-92851)
[»] scaffold0697 (1 HSPs)
scaffold0697 (39-83)||(1633-1677)
[»] scaffold0306 (1 HSPs)
scaffold0306 (28-90)||(13382-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (28-90)||(21883-21945)
[»] scaffold0122 (1 HSPs)
scaffold0122 (28-86)||(7996-8054)
[»] scaffold0103 (1 HSPs)
scaffold0103 (28-90)||(51793-51855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (26-80)||(53172-53226)
[»] scaffold0036 (1 HSPs)
scaffold0036 (22-83)||(9756-9817)
[»] scaffold0020 (1 HSPs)
scaffold0020 (22-71)||(135321-135370)
[»] scaffold0223 (1 HSPs)
scaffold0223 (28-80)||(20164-20216)
[»] scaffold0049 (1 HSPs)
scaffold0049 (28-72)||(63773-63817)
[»] scaffold0008 (1 HSPs)
scaffold0008 (26-90)||(263385-263449)
[»] scaffold0066 (1 HSPs)
scaffold0066 (28-83)||(33378-33433)
[»] scaffold1528 (1 HSPs)
scaffold1528 (22-80)||(1027-1085)
[»] scaffold0053 (1 HSPs)
scaffold0053 (28-90)||(8780-8842)
[»] scaffold0110 (1 HSPs)
scaffold0110 (22-79)||(28843-28900)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-89)||(192264-192325)
[»] scaffold0361 (1 HSPs)
scaffold0361 (28-80)||(14522-14574)
[»] scaffold0279 (1 HSPs)
scaffold0279 (47-79)||(17904-17936)
[»] scaffold0027 (1 HSPs)
scaffold0027 (28-80)||(46674-46726)
[»] scaffold0024 (1 HSPs)
scaffold0024 (26-70)||(68255-68299)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 12124138 - 12123970
Alignment:
Q  42 tatatgattttctcaaattattagcggtgttggc------gtgtctgtatccgtgcttcatagcgtatgagagctccccaaattgcgttttatgtgataa 135  Q
    ||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12124138 tatatgattttctcaaattattagcggtgttggcttgtccgtgtctgtatccgtgcttcatagcctatgagagctccccaaattgcgttttatgtgataa 12124039  T
Q  136 cacggcggtggaatcagccacccatctttttcttcattgtggagtggcaatgaatgtttggtttcaggt 204  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  12124038 cacggtggtggaatcagccacccatctttttcttcgttgtgtagtggcaatgaatgtttggttacaggt 12123970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 34897135 - 34897068
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||    
T  34897135 cacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 27213597 - 27213529
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| || |||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  27213597 cacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtg 27213529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 24362211 - 24362269
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  24362211 cacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtc 24362269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 39954288 - 39954346
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 31236586 - 31236651
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatcc 87  Q
    ||||||||||| || |||||||| ||||||||||||||||||||| |||| |||||||| ||||||    
T  31236586 cacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 13844605 - 13844663
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||| |||| ||||||||    
T  13844605 cacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 12606838 - 12606887
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  12606838 cacatataattacattgaattatatgattttctcaaattattagcagtgt 12606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 4611583 - 4611535
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 4786347 - 4786405
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||  ||||| ||||||||    
T  4786347 cacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtc 4786405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 14731762 - 14731713
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||| ||||    
T  14731762 cacatataattacactaaattatgtgattttctcaaattattagcagtgt 14731713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 18067955 - 18067992
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  18067955 cactgaattatgtgattttctcaaattattagcggtgt 18067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 20785474 - 20785527
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggc 75  Q
    ||||||||||| || | |||||| |||||| |||||||||||||||||||||||    
T  20785474 cacatataattacattaaattatgtgatttcctcaaattattagcggtgttggc 20785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 3025597 - 3025557
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 7658510 - 7658458
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    |||||||| ||||||||||| | |||||||||||||||||| ||||| |||||    
T  7658510 atataattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 14134746 - 14134706
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattag 65  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 27101555 - 27101507
Alignment:
Q  32 ttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| |||||| ||||||| |||||||||||||||||| ||||||||    
T  27101555 ttcactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 27101507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 31109527 - 31109595
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||| ||  |||||||| | ||||||||||||||||||| |||||| |||||||| || ||||||    
T  31109527 cacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 126390 - 126425
Alignment:
Q  54 tcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||||||||||||||||||||||||| ||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgt 126425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 11927095 - 11927150
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||| | |||| |||||    
T  11927095 cacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 12559116 - 12559159
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagc 66  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||    
T  12559116 acatatgattacactgaattatatcattttctcaaattattagc 12559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 37283824 - 37283867
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtg 70  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 11803309 - 11803267
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||    
T  11803309 cacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 14634153 - 14634199
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| ||||||||||||| ||||||| ||||| ||||||||||    
T  14634153 atataattacactgaattatataattttcttaaattgttagcggtgt 14634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 18069155 - 18069189
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| ||||||||||||||||||||||||||    
T  18069155 tgaattatttgattttctcaaattattagcggtgt 18069189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 11944715 - 11944658
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||| | |||| |||||||    
T  11944715 cacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 20679408 - 20679453
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||||||| ||| |||||||||||||||||||| |||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgt 20679453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 22652011 - 22651958
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||| ||||||| ||||||||||||| |||| |||||||| || ||||||    
T  22652011 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 22651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 24447076 - 24447011
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||| | || |||||| ||||||||||||||||| | || | |||||||||| |||||||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtg 24447011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 34222997 - 34222944
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggc 75  Q
    ||||||||||| |||| |||||| ||||||| | |||||||||||| |||||||    
T  34222997 cacatataattacacttaattatgtgattttattaaattattagcgatgttggc 34222944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 36934720 - 36934671
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| || |||||||| ||||||| || |||||||||||||||    
T  36934720 cacatataattacaatgaattatgtgattttttcgaattattagcggtgt 36934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 926801 - 926865
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| |||||||  ||  |||||||||||||||||||  ||||||||||||| || ||||||    
T  926801 tataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtg 926865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 4673440 - 4673492
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||| ||||||||| ||||||||||| | |||| ||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtc 4673492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 13203688 - 13203648
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattag 65  Q
    |||||||| ||||||||||| | ||||||||||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 29776085 - 29776037
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||  |||||||||  ||||||||||||||||||||| ||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgt 29776037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 30077402 - 30077454
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| |||| || ||||||||||||| | |||||||||||    
T  30077402 taattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtc 30077454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 12443469 - 12443544
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcata 97  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtgcttcata 12443544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 6427400 - 6427331
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgc 91  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  6427400 cacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgc 6427331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 36878507 - 36878453
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 36878453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 38503370 - 38503321
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  38503370 cacatataattacactgaaatatatgattttctcaaattattagcggtgt 38503321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 398778 - 398842
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||| || ||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtg 398842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 2896142 - 2896198
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||    
T  2896142 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 2896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 25098559 - 25098622
Alignment:
Q  17 tcttgcacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||| ||||    
T  25098559 tcttacacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 40181920 - 40181848
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcata 97  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||||    ||||| ||||||||||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattattagcagtgt--ctgtgtccgtatccgtgcttcata 40181848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 10233303 - 10233245
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||| |||||||| |||||    
T  10233303 cacatataattacactgaattatgtgattttctcaatttattagtggtgttggtgtgtc 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17831540 - 17831598
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||| |||||||| || |||||||||||||||||||||||||| ||||||||    
T  17831540 cacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtc 17831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 36906047 - 36905989
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| | ||||||||| ||||||||||| ||||||||||||||||| |||||    
T  36906047 cacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtc 36905989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 11605944 - 11605989
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcg 67  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  11605944 cacatgtaatttcactgaattatatgattttttcaaattattagcg 11605989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 1486722 - 1486786
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| ||||  ||||||| |||||||||    
T  1486722 tataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtg 1486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 9709870 - 9709802
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| ||  ||||||| |||||||||||||||||||||||||| ||| |||| || ||||||    
T  9709870 cacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtg 9709802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 21530722 - 21530678
Alignment:
Q  39 aattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  21530722 aattatatgattttctcaaattattaacggtgtcggcgtgtctgt 21530678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 34298482 - 34298418
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||| || ||||| || ||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtg 34298418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 7918220 - 7918263
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattag 65  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  7918220 cacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 25361936 - 25361881
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||    
T  25361936 cacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 1864889 - 1864931
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  1864889 cacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 9828094 - 9828036
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| |||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  9828094 cacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 10474998 - 10475044
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  10474998 cactgaattatgtgattttctcaagttattagcggtgtcggcgtgtc 10475044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 10572598 - 10572656
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||| ||||| ||||||||    
T  10572598 cacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtc 10572656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 19324613 - 19324563
Alignment:
Q  21 gcacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||| ||||    
T  19324613 gcacatataattacactgaattatgtgattttctcaaattatcagcagtgt 19324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 19562630 - 19562688
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||| |||  |||||||||||||||||||| |||| ||||||||    
T  19562630 cacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtc 19562688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 22515902 - 22515972
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatag 98  Q
    ||||| |||| |||||| ||||||| ||||||||||||| ||||  ||||||| || ||||||||||||||    
T  22515902 taattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtgcttcatag 22515972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 40285675 - 40285721
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||    
T  40285675 cactgaattatgcgattttctcaaattattagcggtgttggtgtgtc 40285721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 44482280 - 44482234
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcgg 68  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  44482280 cacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 46348398 - 46348460
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| |||||||||||||| ||||||||||||| |||| |||||||| || ||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 5898277 - 5898330
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||| ||||||||||| ||||||| ||| |||||||||||||| |||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtcggcgt 5898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 9629921 - 9629958
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9629921 cactgaattatatgattttatcaaattattagcggtgt 9629958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 13436508 - 13436451
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||| ||||||||||| |||||| || ||||||||||| |||| |||||||    
T  13436508 cacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgt 13436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 14332652 - 14332709
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||| |||| |||||| |||||||||||||||||||| ||||| ||| ||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 16927197 - 16927238
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagc 66  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  16927197 atataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 20157359 - 20157408
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||| ||||||||||| ||||||||||| ||||||||||||||    
T  20157359 cacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 25452162 - 25452215
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| |||||||||||  |||||||||||||||||||| |||||||| ||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 34371763 - 34371715
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  34371763 cacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 52903299 - 52903242
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||| ||||||||||||||||||| | ||||||||| |||| | |||||||    
T  52903299 cacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgt 52903242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 113343 - 113291
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 31015087 - 31015039
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcg 76  Q
    ||||| ||||||||||| ||||||||||||||||||||| |||| ||||    
T  31015087 taattacactgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 1262919 - 1262876
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgtc 1262876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 5376515 - 5376566
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||| ||||||||||| | ||||||| |||||||||||||||| |||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcggtgtcggcgtgt 5376566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 5927366 - 5927417
Alignment:
Q  39 aattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||||||||| ||||||||||||| ||||| ||||||| || ||||||    
T  5927366 aattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtg 5927417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 27471575 - 27471622
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    ||||| ||||| ||||||||||| || |||||||||||||||||||||    
T  27471575 cacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 28674847 - 28674792
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||  |||||||||| | ||||||||||||||||| ||||||| |||||||    
T  28674847 atataattatactgaattatgtaattttctcaaattattaacggtgttagcgtgtc 28674792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 39953155 - 39953210
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    |||||| |||| |||| |||||| ||||||||| |||||||||||||||| |||||    
T  39953155 cacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 2851061 - 2851004
Alignment:
Q  32 ttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||||| | ||||| ||||||||||||||||| || |||||| |||||||||    
T  2851061 ttcactgaattatgtaattttatcaaattattagcggtg-tgacgtgtcagtatccgtg 2851004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 12707883 - 12707925
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattag 65  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  12707883 acatataattgcactaaattatatgattttcttaaattattag 12707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 13997933 - 13997875
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||| | |||| |||| |||||| ||||||||    
T  13997933 cacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtc 13997875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 17754361 - 17754303
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| || ||||||||||| | ||||| |||||||||||||||||| || |||||    
T  17754361 cacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtc 17754303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 19909335 - 19909297
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgtt 72  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  19909335 cactgagttatgtgattttctcaaattattagcggtgtt 19909297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 42325598 - 42325552
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| | ||||||||||||||||| ||||||||| |||||    
T  42325598 cactgaattatgtcattttctcaaattattatcggtgttggtgtgtc 42325552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 48450602 - 48450664
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| |||||| | ||||| ||||||||||||| ||||||||||||| || ||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtg 48450664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 17425102 - 17425151
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| || |||||||| ||||||| ||||||||||| ||||||    
T  17425102 cacatataattacattgaattatgtgattttatcaaattattatcggtgt 17425151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 23738728 - 23738679
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||||||| ||||    
T  23738728 cacatttaattgcactgaattatgtgattttttcaaattattagctgtgt 23738679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 26238133 - 26238170
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  26238133 cactgaattatgttattttctcaaattattagcggtgt 26238170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 29163390 - 29163451
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    |||||||||||  | |||||||| ||||||||  ||||| |||||||||| |||||||||||    
T  29163390 cacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgt 29163451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 41877485 - 41877534
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||| |||| |||||| | |||||||||||||||||||||||| |||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 6415010 - 6415078
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||||  |||| ||||| |||||||||||||| ||||||| ||| |||||||| || ||||||    
T  6415010 cacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 9033021 - 9033085
Alignment:
Q  27 ataatttcactgaattatatgattttct-caaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||| ||||||||||| ||||||| | ||||||||||| ||||||| |||||| || ||||||    
T  9033021 ataattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcagtgtccgtg 9033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 9449030 - 9449078
Alignment:
Q  35 actgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    |||||||||| ||||||| |||||||||||  |||||||| ||||||||    
T  9449030 actgaattatgtgattttttcaaattattaatggtgttggtgtgtctgt 9449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 16252895 - 16252963
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| |||||||| |||| |||||||  |||||||| ||||||||  || || |||||||||    
T  16252895 cacatataattacactgaatcatatcattttcttgaattattaacggtgttgatgtatcagtatccgtg 16252963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 34712392 - 34712436
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||||||| |||| |||||| | |||||||||||||||||||    
T  34712392 cacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 40917777 - 40917733
Alignment:
Q  46 tgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||||| |||| |||||||| |||||||||    
T  40917777 tgattttttcaaattattagctgtgtcggcgtgtcagtatccgtg 40917733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 49872887 - 49872843
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||||||| |||||||||||||  ||||||||||| ||||||    
T  49872887 cacatataattacactgaattatatagttttctcaaatgattagc 49872843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 7265602 - 7265660
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  7265602 cacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtc 7265660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 19040402 - 19040339
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtat 85  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  19040402 cacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 30866153 - 30866211
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||    
T  30866153 cacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtc 30866211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 9658926 - 9658861
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||| || ||||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 9658861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 7996389 - 7996445
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  7996389 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtc 7996445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 8022412 - 8022356
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  8022412 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtc 8022356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 9027228 - 9027160
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| ||| ||||||| ||||| |||||||||||||||||||| |||||||| || ||||||    
T  9027228 cacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtg 9027160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 9629433 - 9629365
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| || |||||||| |||||||||||||||||| ||||||| ||||||||  ||||||||    
T  9629433 cacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtg 9629365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 26562739 - 26562681
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||| |||| ||||||||    
T  26562739 cacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 34073358 - 34073424
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||| |||||||||||  ||||||||||||||||||||| ||||||| |||| || ||||||    
T  34073358 catataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtg 34073424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 7378029 - 7377968
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    ||||||||||| || |||||||| ||||||||||||||| |||||||||| || ||||||||    
T  7378029 cacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgtctgt 7377968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 9025503 - 9025552
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  9025503 cacatataattacactgaattatgtgattttctcaaattattagcagtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 3398664 - 3398601
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||| |||||||| || ||||||    
T  3398664 tataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtg 3398601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 13360382 - 13360442
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    |||||||||| ||||||||||| |||||||||||||||| ||| ||||| | |||||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgt 13360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 13851786 - 13851718
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| ||||||||||  | |||||||||||||||||||||||| | |||||| || ||||||    
T  13851786 cacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtg 13851718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 7151462 - 7151407
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||| |||||||||||    
T  7151462 cacatataattacacttaattatgtgattttttcaaattattagaggtgttggcgt 7151407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 21924944 - 21924999
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||| |||| |||||    
T  21924944 cacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 31579239 - 31579286
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggtgttgg 31579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 34447374 - 34447425
Alignment:
Q  29 aatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||| |||| |||||||||||||| ||||||||||| |||||||||||||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtc 34447425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 5732519 - 5732577
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| || ||| ||||||||||||||||||| |||||| ||||||||    
T  5732519 cacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtc 5732577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 7938162 - 7938108
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| |||| |||||||||||||| ||||||||||||| |||| ||||||||    
T  7938162 tataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtc 7938108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 10842582 - 10842524
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||| |||| |||||| ||||||| |||||||||||||||||| ||||||||    
T  10842582 cacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 13364714 - 13364772
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||| |||| ||| ||||    
T  13364714 cacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtc 13364772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 17341677 - 17341731
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| ||||||| ||||||||||| |||||| ||||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtc 17341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20371119 - 20371177
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||  || ||| |||| |||||||||||||||||||||||||| ||||||||    
T  20371119 cacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtc 20371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 24832638 - 24832593
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcg 67  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||    
T  24832638 cacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 32298616 - 32298681
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatcc 87  Q
    ||||||||||| |||| |||||| ||||  ||| |||||||||||||||||||| |||| ||||||    
T  32298616 cacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagtatcc 32298681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 32511679 - 32511724
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7086845 - 7086801
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||    
T  7086845 cacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 7723260 - 7723308
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  7723260 acatataattatgctgaattatatgattttctcaaattattagcagtgt 7723308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 10770689 - 10770741
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||  |||||||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtc 10770741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 16766741 - 16766689
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  16766741 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 16766689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 21395342 - 21395374
Alignment:
Q  48 attttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||||||||||||||||||||||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 5000648 - 5000703
Alignment:
Q  35 actgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| || |||||||||| ||||||||||||||| | |||||| |||||||||    
T  5000648 actgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtg 5000703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 7977845 - 7977904
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatcc 87  Q
    ||||| ||||||||||| | ||||| ||||||||||||| |||| |||||||| ||||||    
T  7977845 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatcc 7977904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 8389485 - 8389524
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattag 65  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  8389485 tataattacactgaattatatgattttcttaaattattag 8389524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 9617484 - 9617437
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    ||||||||||| || |||||||| ||||||||||||||||||| ||||    
T  9617484 cacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 10339134 - 10339193
Alignment:
Q  22 cacatataattt-cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||||  ||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  10339134 cacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtc 10339193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 21424830 - 21424869
Alignment:
Q  41 ttatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  21424830 ttatgtgattttttcaaattattagcggtgttggcgtgtc 21424869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 5462733 - 5462687
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| || |||||||| ||||||||||||||||||| ||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgt 5462687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 11591879 - 11591917
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaatt 60  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  11591879 cacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 12696368 - 12696306
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| | ||||| ||||||||||||| |||| |||||||| || ||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 12696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 17168484 - 17168530
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||| |||||||| ||||||||||||||||| | |||||||||||||    
T  17168484 cactaaattatatcattttctcaaattattatcagtgttggcgtgtc 17168530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 17841604 - 17841666
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| |||||| ||||||| ||||||||||||| |||| |||||||| || ||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 19044514 - 19044456
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||  ||||||||||| |||| |||||||||||||||  |||| ||||||||    
T  19044514 cacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtc 19044456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 19602202 - 19602248
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||||| ||||||||||||||||| | ||||||| |||||    
T  19602202 cactgaattatatcattttctcaaattattatcagtgttggtgtgtc 19602248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 21142168 - 21142126
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||||| |  ||||||||||||||||||||||||||||||    
T  21142168 cacatataactagactgaattatatgattttctcaaattatta 21142126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 33001298 - 33001356
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| || | |||||| ||||||| ||||||||||||| |||| ||||||||    
T  33001298 cacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtc 33001356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 2040609 - 2040658
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    ||||||||| |||||||||  |||||||||||||||||||| ||| ||||    
T  2040609 atataattttactgaattacgtgattttctcaaattattagtggttttgg 2040658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 8931611 - 8931668
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    |||||||||||  |||||||||| | ||||||||||||| ||||| |||| |||||||    
T  8931611 cacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 10888983 - 10889032
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||  |||| |||||| ||||||| ||||||||||||||||||    
T  10888983 cacatataatcacactaaattatgtgattttatcaaattattagcggtgt 10889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 677869 - 677829
Alignment:
Q  40 attatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||||||||||||||||| | |||| ||||||||    
T  677869 attatatgattttctcaaattattaacagtgtcggcgtgtc 677829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 2117122 - 2117062
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    ||||||| || |||||||| ||||||| |||||||||||| ||||| || ||||| |||||    
T  2117122 tataattgcattgaattatgtgattttttcaaattattagaggtgtcggagtgtccgtatc 2117062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 7569181 - 7569229
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    ||||||| ||||||||||| | ||||||||||||||||| | |||||||    
T  7569181 tataattacactgaattatgtaattttctcaaattattatctgtgttgg 7569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 10294157 - 10294089
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| || |||| |||  |||| |||||||||||||||||| | ||| |||| |||||||||    
T  10294157 cacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtg 10294089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 17411877 - 17411917
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattat 62  Q
    |||||||||||  |||||||||||||||||||| |||||||    
T  17411877 cacatataattatactgaattatatgattttcttaaattat 17411917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 24138475 - 24138427
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| | |||| |||||||||||||| ||||||||||||| ||||    
T  24138475 acatataaatacacttaattatatgattttttcaaattattagcagtgt 24138427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 34595178 - 34595126
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||  |||| ||||||||    
T  34595178 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34595126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 8039844 - 8039902
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  8039844 cacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtc 8039902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 8383303 - 8383249
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8383303 tataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtc 8383249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 5407260 - 5407329
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttca 95  Q
    ||||||| || |||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgcttca 5407329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 12704056 - 12703982
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcata 97  Q
    |||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtccatatccgtgattcata 12703982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 14840304 - 14840368
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||| ||||||||| |||||||||  |||||||||||||| |||||||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtg 14840368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 10455840 - 10455782
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| | |||||||||||||||| ||||||||| |||||||||||||    
T  10455840 cacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtc 10455782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 7928500 - 7928451
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  7928500 cacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 11610559 - 11610507
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||| |||||    
T  11610559 cactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatc 11610507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 17005632 - 17005680
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  17005632 tataattacactgaattatatgattttatcaaattattagtggtgttgg 17005680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 23870580 - 23870635
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||| || |||||    
T  23870580 cactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgt 23870635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 29508494 - 29508451
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattag 65  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  29508494 cacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 49505163 - 49505210
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  49505163 cacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 10690274 - 10690320
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 16192759 - 16192817
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| | ||||||||||||||||| |||||| || |||||    
T  16192759 cacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 29112292 - 29112338
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgt 29112338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 32804549 - 32804607
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| |||||| ||| ||||    
T  32804549 cacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtc 32804607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 8789559 - 8789620
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    ||||||||||| ||| ||||||| ||||||||||||||||| ||| |||| || ||||||||    
T  8789559 cacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgt 8789620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 11313809 - 11313858
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||| ||||    
T  11313809 cacatataattacactaaattatgtgattttctcaaattattagcagtgt 11313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 14832143 - 14832074
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcata 97  Q
    ||||| || ||| |||| ||||||| ||||||||||||| || | |||||||| ||||||||||||||||    
T  14832143 taattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtgcttcata 14832074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 25652052 - 25652097
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  25652052 cactgaattatatcattttctcaaattattatccgtgttggcgtgt 25652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 34307793 - 34307838
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 4987306 - 4987358
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 4987358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 11493372 - 11493428
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||| ||||||||||| ||||||||||| |||||||| ||||| | ||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtc 11493428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 15796309 - 15796361
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||| ||||||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtc 15796361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 1550186 - 1550135
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||| ||||||||  | ||||||| ||||||||||||||||||||||||    
T  1550186 tataattacactgaatagtgtgattttttcaaattattagcggtgttggcgt 1550135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 4466608 - 4466667
Alignment:
Q  21 gcacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||  | ||||||||||||||||||||| ||||||||| |||||| || |||||    
T  4466608 gcacatatagctacactgaattatatgattttcttaaattattaccggtgtcggagtgtc 4466667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 4469897 - 4469842
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| || ||||||||||| ||||||||| |||||||| ||||| ||||||||||    
T  4469897 atatacttacactgaattatgtgattttcttaaattattggcggtattggcgtgtc 4469842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 9624689 - 9624642
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||| || |||||||| ||||||||||||||||||||| ||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgt 9624642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 11252023 - 11251984
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagc 66  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 45451603 - 45451523
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttgg----cgtgtctgtatccgtgcttcatag 98  Q
    ||||||| |||  |||||| ||| ||||||||||||||||||||| ||||| |    |||||| |||||||||||||||||    
T  45451603 cacatattattatactgaagtatgtgattttctcaaattattagcagtgttcgtgtccgtgtccgtatccgtgcttcatag 45451523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 1509583 - 1509511
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgt---tggcgtgtctgtatccgtgcttcata 97  Q
    ||||| |||| |||||| ||||||| ||||||||||||| ||||   || | |||||||||||||||||||||    
T  1509583 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtctgtatccgtgcttcata 1509511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 4990982 - 4991044
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| | ||||||||||| |||||||||||| || ||||| || ||||||    
T  4990982 taattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtg 4991044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 5339141 - 5339091
Alignment:
Q  39 aattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    |||||| ||||||||||||||||||| |  ||| |||||||||||||||||    
T  5339141 aattatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgt 5339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 11658865 - 11658807
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||  |||||||||||  |||||||||||||||||| || |||||| |||||    
T  11658865 cacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtc 11658807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 26492220 - 26492282
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||| ||||||||| |||||||||||||  ||| |||||||| || ||||||    
T  26492220 taattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtg 26492282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 26508154 - 26508096
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    ||||| ||||||||||| ||||||| ||||||||||||| ||||  ||||||| |||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatc 26508096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 28918045 - 28917983
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||| |||||||||||||  ||| |||||||| || ||||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtg 28917983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 32429393 - 32429447
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| ||||||||| |||||||||||| ||| || |||||    
T  32429393 tataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtc 32429447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 1438853 - 1438796
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||  |||||||||| ||||||||||||||| |||||| ||| || |||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtc 1438796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 4201443 - 4201394
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    |||||||| |||| |||||| ||||||| ||||||||||| |||||||||    
T  4201443 atataattacacttaattatgtgattttttcaaattattaacggtgttgg 4201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 5441045 - 5441098
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| || |||||||| ||||||||||||||| |||||||||  ||||||||    
T  5441045 ataattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtc 5441098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 13620773 - 13620822
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||| | |||||||| || |||||||||||||||| |||||||||    
T  13620773 cacatataactgcactgaatcatgtgattttctcaaattactagcggtgt 13620822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 14979224 - 14979175
Alignment:
Q  29 aatttcactgaattatatgattttctcaaattattagcggtgttggcgtg 78  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||| ||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 21720807 - 21720746
Alignment:
Q  29 aatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||| |||||||||||  ||| |||||||||||||| |||||| |||||||| || ||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 24633811 - 24633758
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| ||| ||||||| |||||||||||||||||||| ||||| ||| ||||    
T  24633811 ataattgcaccgaattatgtgattttctcaaattattagtggtgtcggcatgtc 24633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 25064954 - 25064901
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| |||| |||||| ||||||| |||||| ||||||||||| ||||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtc 25064901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 25093552 - 25093495
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||| ||||||||| | |||||||||||||| |||| | |||| |||||||    
T  25093552 cacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgt 25093495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 13799554 - 13799482
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttc 94  Q
    ||||||| ||| |||| |||||| | ||||||||||| ||||| ||||||   |||||||||||| |||||||    
T  13799554 cacatattattacacttaattatgtcattttctcaaactattatcggtgtcaacgtgtctgtatctgtgcttc 13799482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 15812832 - 15812876
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcgg 68  Q
    ||||||||| |||||| |||| |||||||||||||||||| ||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcgg 15812876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21479162 - 21479110
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||| | ||||||| ||||||||||||| |||| ||||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtc 21479110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 24205054 - 24205118
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||| ||||| | ||||||||||||||||| | |||| |||||||| || ||||||    
T  24205054 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 24205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 25948900 - 25948940
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||| ||||||||||| ||||||| |||||||||||||    
T  25948900 tataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 27277852 - 27277896
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||| |||| |||||| ||||||||||||||||||||| ||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgt 27277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 34910361 - 34910309
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||  |||| ||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 8e-20; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 16189759 - 16189682
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttgg-cgtgtctgtatccgtgcttcatag 98  Q
    |||| |||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  16189759 cacacataattacactgaattatgtgattttctcaaatttttagcggtgttggccgtgtccgtatccgtgcttcatag 16189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 36635374 - 36635316
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  36635374 cacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtc 36635316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 8423731 - 8423802
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatagc 99  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| |  || ||||||| |||||||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtcg--gtatctgtattcgtgcttcatagc 8423802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 40613500 - 40613442
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  40613500 cacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtc 40613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 3712518 - 3712567
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  3712518 cacatataattacattgaattacatgattttctcaaattattagcggtgt 3712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 22440609 - 22440658
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgt 22440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 35952627 - 35952691
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatcc 87  Q
    |||||||||| || |||||||||||||||| ||||||||||||| |||  |||||||| ||||||    
T  35952627 acatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtccgtatcc 35952691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 56257978 - 56257934
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgt 56257934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtg 70  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 35723393 - 35723452
Alignment:
Q  22 cacatataatttcactgaattatatg-attttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| || |||||||| || |||||||||||||||||||||||| ||||||||    
T  35723393 cacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtc 35723452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 16184862 - 16184820
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  16184862 ataatttcactgaattgtgtgattttctcaaattattagcggt 16184820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 999357 - 999402
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcg 67  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  999357 cacatataattacactaaattatatgatttactcaaattattagcg 999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 1747258 - 1747205
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    |||||||  |||||||||| |||||||||||| ||||||||||||| |||||||    
T  1747258 tataattaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 1747205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 6863202 - 6863153
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgtt 72  Q
    |||||||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  6863202 acatataattgcaccgaattatatgattttttcaaattattaacggtgtt 6863153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 13783332 - 13783263
Alignment:
Q  21 gcacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||||||| ||||||||| | |||| ||||||||| ||||||||||| || ||||| || ||||||    
T  13783332 gcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtg 13783263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 15659769 - 15659855
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttgg----cgtgtctgtatccgtgcttcatagcgtatg 104  Q
    ||||||||||| ||| |||||||  |||||||||||||||||||| |||||||    |||||| |||||  ||||||||||| ||||    
T  15659769 cacatataattacaccgaattatgagattttctcaaattattagcagtgttggtgttcgtgtccgtatcaatgcttcatagcttatg 15659855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 30522927 - 30522992
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| || ||||||||||| |||||||||||||| |||||||||||  |||| || |||||||||    
T  30522927 atatagttacactgaattatgtgattttctcaaataattagcggtgtgagcgtatcagtatccgtg 30522992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 56488519 - 56488568
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||| | ||||||||||||||||||||||||| ||||||||||    
T  56488519 cacatatgattaccctgaattatatgattttctcaaattgttagcggtgt 56488568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 7012104 - 7012048
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||| || ||||||    
T  7012104 cactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 37698759 - 37698719
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattag 65  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  37698759 atataattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 8402752 - 8402787
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaa 58  Q
    |||||||||| |||||||||||||||||||||||||    
T  8402752 acatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 40742641 - 40742586
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||||| ||||  |||||||||||||||||||||||||  ||||| |||||    
T  40742641 cacatataattacactagattatatgattttctcaaattattaatggtgtcggcgt 40742586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 5775367 - 5775409
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||||||| |||| |||||| |||||||||||||||||||    
T  5775367 cacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 7214533 - 7214606
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatag 98  Q
    ||||||||| || | |||||| |||||||||||||||||||| |||||| | ||||| ||  |||||||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattattagtggtgtt-gagtgtccgtgcccgtgcttcatag 7214606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 9299064 - 9299121
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| ||| |||| |||||||||||||||||||  ||||||||||||    
T  9299064 cacatataattacacttaat-atattattttctcaaattattagcaatgttggcgtgtc 9299121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 15029815 - 15029757
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| |||| || ||||||||||||| ||||  |||||||    
T  15029815 cacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtc 15029757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 24343553 - 24343499
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| | ||||||||||||||||| | |||| ||||||||    
T  24343553 tataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtc 24343499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 29205488 - 29205442
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  29205488 taattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 30982891 - 30982952
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||||   |||||||||||| ||||||    
T  30982891 tataattacactgaaatatgtgattttctcaaatcattagcgg---tggcgtgtctgtgtccgtg 30982952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 38148741 - 38148783
Alignment:
Q  29 aatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgt 38148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 39035938 - 39035983
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  39035938 acatataatttcactgaattatgtga-tttctcaaattattaacggt 39035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 44796969 - 44797039
Alignment:
Q  20 tgcacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||| || |||||||| | ||||||||||||||||  |||||||| | ||||||| ||||||    
T  44796969 tgcacatgtaattacattgaattatgttattttctcaaattattgtcggtgttgacatgtctgtgtccgtg 44797039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 7970568 - 7970535
Alignment:
Q  23 acatataatttcactgaattatatgattttctca 56  Q
    |||||||||| |||||||||||||||||||||||    
T  7970568 acatataattacactgaattatatgattttctca 7970535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 11596367 - 11596416
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||| ||||||||||| ||||||| |||||||||||||  |||||||||    
T  11596367 taattacactgaattatgtgattttttcaaattattagctttgttggcgt 11596416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 12047397 - 12047445
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||||||    
T  12047397 cacatataattacactgaattataaga-tttctcaaattattaacggtgt 12047445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 23293008 - 23293053
Alignment:
Q  35 actgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  23293008 actgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 23293053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 26504308 - 26504357
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||    
T  26504308 cacatataattacactgaactatttgattttcttaaattattagcagtgt 26504357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 9996889 - 9996849
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattatt 63  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  9996889 acatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 13134500 - 13134444
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtg 78  Q
    ||||||||||| |||| |||||| ||||||||| ||||||| ||| |||| ||||||    
T  13134500 cacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 18576046 - 18576086
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattat 62  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  18576046 cacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 20521866 - 20521926
Alignment:
Q  30 atttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||| |||||||| ||||||| ||||||||||| |||| | |||||||| || ||||||    
T  20521866 atttcattgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtg 20521926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 21873385 - 21873421
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattatt 63  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  21873385 ataatttcactgaattatgtgattttatcaaattatt 21873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 21929246 - 21929282
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattatt 63  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  21929246 ataatttcactgaattatgtgattttatcaaattatt 21929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 22234899 - 22234967
Alignment:
Q  22 cacatataatttcactgaattatatga-ttttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    |||||| |||| ||||||||||| ||| |||| ||||||| |||||||||| |||||||| || |||||    
T  22234899 cacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgt 22234967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 34200295 - 34200327
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggt 69  Q
    |||||||| ||||||||||||||||||||||||    
T  34200295 tgaattatgtgattttctcaaattattagcggt 34200327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 38847027 - 38847079
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| |||||||| |||||||||| ||||||||||||| |||| || |||||    
T  38847027 taattacactgaataatatgattttttcaaattattagctgtgtcggagtgtc 38847079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 8e-20; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 22084848 - 22084917
Alignment:
Q  29 aatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatag 98  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  22084848 aattacactgaattatatgattttctcaaattattaacggtgttgatgtgtccgtatccgtgcttcatag 22084917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 21616812 - 21616744
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||    
T  21616812 cacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtg 21616744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 39279725 - 39279667
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  39279725 cacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtc 39279667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 23718076 - 23718008
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||| || ||||| || ||||||    
T  23718076 cacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 23718008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 24105748 - 24105680
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||| || ||||| || ||||||    
T  24105748 cacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 24105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 18420447 - 18420506
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtat 85  Q
    ||||||| || |||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  18420447 tataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 34691814 - 34691861
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34691814 cacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 34714226 - 34714273
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34714226 cacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 28677958 - 28677904
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 37411253 - 37411311
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  37411253 cacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtc 37411311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 21782832 - 21782885
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 21782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 44860370 - 44860321
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  44860370 cacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 16069263 - 16069331
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||| |||||| ||||||||||||||||||| | ||||||||| |||||| |||||||| || ||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtg 16069331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 24975336 - 24975383
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||| || |||||||||||| |||||||||||||||||||||||||    
T  24975336 catatatttacactgaattatacgattttctcaaattattagcggtgt 24975383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 30527604 - 30527646
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  30527604 cacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 31018636 - 31018582
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| |||| ||| || ||||||||| |||||||||||||||||||||||||    
T  31018636 tataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtc 31018582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 31808127 - 31808069
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||| | |||||||||||||||| || |||||    
T  31808127 cacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtc 31808069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 35449563 - 35449505
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||| | ||||||||||||||||||| | |||||||| ||||    
T  35449563 cacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtc 35449505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 18276571 - 18276522
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||| |||||| ||||||||||  ||||||||||||||||||||||||||    
T  18276571 cacacataattacactgaattaagtgattttctcaaattattagcggtgt 18276522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 1328015 - 1327979
Alignment:
Q  35 actgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1328015 actgaattttatgattttctcaaattattagcggtgt 1327979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 27084297 - 27084245
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    |||||||||||||||||||||||||||||| |||| || ||||| || |||||    
T  27084297 tgaattatatgattttctcaaattattagcagtgtcggagtgtccgtgtccgt 27084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 28412395 - 28412343
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    |||||| ||||||||||| ||||||| ||||||||||| |||||||| |||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgt 28412343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 42832289 - 42832345
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctg 82  Q
    ||||||| ||||||| ||| | |||||||||||||||||||||||| || |||||||    
T  42832289 tataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctg 42832345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 5367242 - 5367199
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattag 65  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||    
T  5367242 cacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 2331832 - 2331786
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||||||||||||||||||  |||||| |||||||    
T  2331832 cactgaattatgtgattttctcaaattattaatggtgtttgcgtgtc 2331786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 2665897 - 2665947
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgtt 72  Q
    ||||||||||| |||| |||||| ||||||||| |||||||||| ||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattagtggtgtt 2665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 18889600 - 18889646
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcgg 68  Q
    ||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  18889600 cacatatgattacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 19574024 - 19573970
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| | ||||||| ||||||||| |||||| ||||||||    
T  19574024 tataattacactgaattatgttattttcttaaattattatcggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 20539689 - 20539751
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| |||||||||||||| ||||||||||||| |||| | |||||| || ||||||    
T  20539689 taattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtg 20539751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 24894433 - 24894371
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||| | ||||||||||| |||| |||||||| || ||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtg 24894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 30404865 - 30404927
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||| ||||||||||| | |||| |||||||| || ||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtg 30404927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 12940950 - 12940987
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattag 65  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattag 12940987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 29970558 - 29970607
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||| ||||||| |||  |||||||||||||||||||||||||    
T  29970558 cacatatgattacactgaactatgcgattttctcaaattattagcggtgt 29970607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 31456654 - 31456699
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| |||||||||| || ||||||| ||||||||||||||||    
T  31456654 tataattacactgaattacataattttcttaaattattagcggtgt 31456699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 2423917 - 2423861
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||  ||| |||||||||||||||||||||| ||||||  || ||||||||    
T  2423917 catataattatactaaattatatgattttctcaaatttttagcgtcgtcggcgtgtc 2423861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 25846787 - 25846743
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtg 70  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||    
T  25846787 tataattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 31284093 - 31284041
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    |||||| || || ||||| ||||||||||||||||||||| |||| |||||||    
T  31284093 ataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgt 31284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 36281734 - 36281682
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggc 75  Q
    |||||| ||| |||| |||||| ||||||||||||||||||| |||| |||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggtattggc 36281682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 34879400 - 34879332
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||| |||||||||    
T  34879400 cacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 3966553 - 3966495
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||||||| ||| ||||    
T  3966553 cacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtc 3966495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 27144513 - 27144455
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| |||||| |||||| ||||||||||||||||||| ||||||||    
T  27144513 cacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtc 27144455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 28588687 - 28588741
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  28588687 tataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtc 28588741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 30502397 - 30502447
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgtt 72  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  30502397 cacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 30542740 - 30542790
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgtt 72  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  30542740 cacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 6471898 - 6471947
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  6471898 cacatataattacactgaattatgtgattttctcaaattattagccgtgt 6471947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 15410457 - 15410525
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||| |||||||| |||| ||||||| |||||||||||||||| |||||||| || ||||||    
T  15410457 cacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 15410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 17123080 - 17123040
Alignment:
Q  40 attatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtc 17123040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 38816729 - 38816773
Alignment:
Q  47 gattttctcaaattattagcggtgttggcgtgtctgtatccgtgc 91  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 38816773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 6035529 - 6035475
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  6035529 atataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtc 6035475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 12927701 - 12927646
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||| || |||||    
T  12927701 atataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtc 12927646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 39205930 - 39205848
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttg------gcgtgtctgtatccgtgcttcatag 98  Q
    ||||||||||| |||  |||||||||||||||||||||||||||| |||| |       ||||||||||||||||||||||||    
T  39205930 cacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccgtgcttcatag 39205848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 7997179 - 7997233
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  7997179 tataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtc 7997233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 12264838 - 12264896
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||||||| || | |||||||||||| ||||||||||||||| ||||    
T  12264838 cacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtc 12264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 27932279 - 27932229
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtg 78  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| ||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 32630744 - 32630802
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| || |||||||||| ||||||||||||||||| ||||||  |||||||    
T  32630744 cacatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtc 32630802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 7677749 - 7677677
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttgg--cgtgtctgtatccgtgcttcatag 98  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||  |||||| || ||||||||||||||    
T  7677749 taattgcactgaattatgtgattttttcaaattattagctgtgtcggtccgtgtccgtttccgtgcttcatag 7677677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 21576760 - 21576809
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagctgtgttggcgt 21576809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 36838593 - 36838544
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||| |||||| | ||||||||||||||||||||||||    
T  36838593 cacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 41091266 - 41091315
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||| ||||    
T  41091266 cacatataattacactgaattatgtgattttctcaaatcattagcagtgt 41091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 17593734 - 17593778
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23012417 - 23012461
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||||||| || | ||||||||||||||||||||||||||||    
T  23012417 cacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 35017085 - 35017029
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||| |||| |||||| |||||||||||||||||||| ||| | ||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattagtggtttcggcgtgtc 35017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 24273039 - 24273078
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaatta 61  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 24389175 - 24389136
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaatta 61  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 25888306 - 25888372
Alignment:
Q  26 tataatttcactgaattatatga--ttttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| |||||||||||||||  |||| | ||||||||||  ||||||| |||||||||||||||    
T  25888306 tataattacactgaattatatgattttttttaaaattattagtagtgttggtgtgtctgtatccgtg 25888372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 33035809 - 33035852
Alignment:
Q  21 gcacatataatttcactgaattatatgattttctcaaattatta 64  Q
    |||||||||||| ||||||||||||||||||  |||||||||||    
T  33035809 gcacatataattacactgaattatatgatttattcaaattatta 33035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 5467991 - 5468045
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| ||||||| ||||||||||| |||| ||| ||||||    
T  5467991 tataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtc 5468045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 6326312 - 6326374
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| | |||||||||||||| ||||| ||| |||||||| || ||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtg 6326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 11685989 - 11685931
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||| ||||||  || |||||||||||||||||||||| ||| ||||    
T  11685989 cacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtc 11685931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 14674313 - 14674251
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| |||||| ||||||| ||||||||||||| |||| |||||||| || ||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 19579745 - 19579683
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| |||||| ||||||||||||||||||||| |||| ||||| || || ||||||    
T  19579745 taattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 19820425 - 19820471
Alignment:
Q  44 tatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||||||||||||||||||||||| || ||||| || ||||||    
T  19820425 tatgattttctcaaattattagcggtgtcggagtgtcagtgtccgtg 19820471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 21191071 - 21191133
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||| |||| || ||||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtg 21191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 25863250 - 25863212
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  25863250 tataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 26312818 - 26312772
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    |||||||||| ||||||||||  |||||||||||||||||| |||||    
T  26312818 acatataattacactgaattaattgattttctcaaattatttgcggt 26312772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 10022679 - 10022642
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattat 62  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  10022679 atataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 16203804 - 16203853
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||| ||||    
T  16203804 cacatataattacactaaattatgagattttctcaaattattagcagtgt 16203853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 18421850 - 18421899
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| ||| ||||    
T  18421850 cacatataattacactggattatgtgattttctcaaattatcagcagtgt 18421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 22611761 - 22611810
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    |||||||| ||||||| ||||||||||||  |||| ||||||||||||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgtgtctgtatc 22611810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 28262408 - 28262473
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||||| | || |||||| ||||||||||||||||| | || | |||||||||| |||||||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtg 28262473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 32766952 - 32767001
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| || |||||| |  |||||||||||||||||||||||||    
T  32766952 cacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 39698585 - 39698524
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||| ||||||||||| ||||||| ||||||||||||| ||||  ||||||| || |||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 6247666 - 6247614
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||  |||| ||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtc 6247614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 24906316 - 24906368
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| | ||||| ||||||||||| | |||||||||||||    
T  24906316 taattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtc 24906368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 31084367 - 31084315
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| || |||||||| ||||||| ||||||||||||| |||| ||||||||    
T  31084367 taattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 31084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 32308170 - 32308112
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  32308170 cacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 32308112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 8046060 - 8046113
Alignment:
Q  46 tgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatagc 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  8046060 tgattttctcaaattattagtggtgttggcgtgtcagtatccgtacttcatagc 8046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 5548726 - 5548646
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggc-----gtgtctgtatccgtgcttcata 97  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||     ||||| ||||||||||||||||    
T  5548726 cacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcatttagtgtccgtatccgtgcttcata 5548646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 29787383 - 29787435
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 20549841 - 20549783
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||| || |||||    
T  20549841 cacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtc 20549783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 22868092 - 22868034
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||    
T  22868092 cacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtc 22868034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 19206100 - 19206043
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    |||||||||||  | |||||||| |||||||||||||||||||||||||| |||||||    
T  19206100 cacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19206043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 1401071 - 1400999
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatag 98  Q
    ||||||| ||||||||||| ||| |||||||||||||||||| | |  ||||||| || ||||||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtgcttcatag 1400999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 17851481 - 17851434
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  17851481 cacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 20545269 - 20545312
Alignment:
Q  46 tgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  20545269 tgattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 3520351 - 3520409
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| || ||||||||||||||||||||||| |||| ||||||  |||||||    
T  3520351 cacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtc 3520409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 6630921 - 6630979
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||  ||| |||||||||||||||| ||||| ||||||||    
T  6630921 cacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtc 6630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 11722121 - 11722175
Alignment:
Q  36 ctgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||| || ||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtg 11722175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 22602719 - 22602777
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||||| |||||||||||||| |||  |||||| ||||||||    
T  22602719 cacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtc 22602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 23191945 - 23191891
Alignment:
Q  23 acatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    |||| ||||| ||||||| ||| |||||||||||||||||||||||||| |||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgt 23191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 27945085 - 27945023
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| | |||||||||||||||||| ||||| |||||||| || ||||||    
T  27945085 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtg 27945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 30731080 - 30731031
Alignment:
Q  29 aatttcactgaattatatgattttctcaaattattagcggtgttggcgtg 78  Q
    |||| ||||||||||| |||||||||||||||||| ||||||| ||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 32287472 - 32287521
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    |||||||| || ||||||||||| ||||||||||| ||||||||||||||    
T  32287472 cacatatacttgcactgaattatgtgattttctcagattattagcggtgt 32287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcg 67  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 2425742 - 2425806
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    |||||||| || |||| |||||| ||||||||||||||||||| |||||  |||||||| |||||    
T  2425742 cacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatc 2425806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 2948733 - 2948669
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    ||||||||||| |||| |||||  ||||||||| ||||||| |||||||| |||||||| |||||    
T  2948733 cacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 3142087 - 3142155
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||| || ||||||||||||||| ||||| |||||||| ||| ||| ||||| |||||||||    
T  3142087 cacatatgattacattgaattatatgatttactcaatttattagcagtgctggtgtgtcggtatccgtg 3142155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 24339686 - 24339634
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  24339686 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 24339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 25481946 - 25481894
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 25481894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 26733354 - 26733286
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||||  |||||||||| ||||||| |||||||||||||||||| | |||||| || ||||||    
T  26733354 cacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtg 26733286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 5236033 - 5235978
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| |||| |||||||| ||||||| |||||||||||||||| | ||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtc 5235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 5835297 - 5835242
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgt 77  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||| ||||| |||||    
T  5835297 cacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgt 5835242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 9482984 - 9482917
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||||||||| ||||||||| | ||||||||||||||||| |||| ||| || ||||| || |||||    
T  9482984 cacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 12289159 - 12289120
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagc 66  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  12289159 ataattccactgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 16341547 - 16341504
Alignment:
Q  21 gcacatataatttcactgaattatatgattttctcaaattatta 64  Q
    |||||||||||| |||| |||||| |||||||||||||||||||    
T  16341547 gcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 23128670 - 23128729
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtct 81  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||  |||||  ||||||||    
T  23128670 cacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgtgtct 23128729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 27093424 - 27093471
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagcggtgt 27093471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 27184877 - 27184830
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagcggtgt 27184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 28155614 - 28155563
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||| ||| ||||||| | |||||||||||||||||||||||| |||||||    
T  28155614 taattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 45056925 - 45056968
Alignment:
Q  37 tgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||    
T  45056925 tgaattatgtgattttctcaaattattagcagtgttggagtgtc 45056968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 1433504 - 1433446
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| |||  ||| || ||||||||||||||||||| |||||| ||||||||    
T  1433504 cacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtc 1433446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 8239059 - 8239101
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattatta 64  Q
    ||||||||||| |||||||||||| |||||||| |||||||||    
T  8239059 cacatataattacactgaattataagattttcttaaattatta 8239101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 10377555 - 10377489
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||||| ||||||||||||||||||||| | ||||||| | |||| ||| || | |||||||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtcggcctgccagtatccgtg 10377489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 14729746 - 14729704
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattattagcggt 69  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  14729746 ataattacactgaattacgtgattttctcaaattattagcggt 14729704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21141003 - 21141049
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||||||||||||| |||||||||| ||||| | ||||||    
T  21141003 cactgaattatatgattttcttaaattattagtggtgtcgacgtgtc 21141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 21568633 - 21568707
Alignment:
Q  24 catataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtgcttcatag 98  Q
    ||||| ||| |||| ||||||  |||||||| ||||||||||| ||||  ||||||| | |||||||||||||||    
T  21568633 catatgattacacttaattatgagattttcttaaattattagccgtgtcagcgtgtccggatccgtgcttcatag 21568707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 22484075 - 22484017
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||||||  ||||||||||   ||||||| |||||||||||||||| ||||||||    
T  22484075 cacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtc 22484017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 26329391 - 26329449
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||||||| ||||||||| | || |||||||||||||||| || ||| ||||||||    
T  26329391 cacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtc 26329449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 8160466 - 8160417
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||| |||||| | ||||||| ||||||||||||||||    
T  8160466 cacatataattacactaaattatgtaattttcttaaattattagcggtgt 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 11890933 - 11890970
Alignment:
Q  27 ataatttcactgaattatatgattttctcaaattatta 64  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  11890933 ataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 13300454 - 13300417
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattag 65  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  13300454 taattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 19992047 - 19992002
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| ||||    
T  19992047 tataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 24289858 - 24289813
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||| | |||||||||||||||| ||||||| |||||||    
T  24289858 cactgaattatgtaattttctcaaattattggcggtgtcggcgtgt 24289813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 33384591 - 33384640
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| |||| ||||||| |||||||||| ||||||| ||||||    
T  33384591 cacatataattacactaaattataggattttctcagattattaacggtgt 33384640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 42720899 - 42720948
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| || | |||||| ||||||| ||||||||||||||||||    
T  42720899 cacatataattacatttaattatgtgattttttcaaattattagcggtgt 42720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 2034479 - 2034423
Alignment:
Q  34 cactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||| ||||||||||| ||||||||||||||| ||||| | |||||  |||||||||    
T  2034479 cactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtg 2034423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 3721143 - 3721099
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagc 66  Q
    |||||||||||  ||| |||||| |||||||||||||||||||||    
T  3721143 cacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 7328700 - 7328744
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagc 66  Q
    ||||||||||| |||| |||||| | |||||||||||||||||||    
T  7328700 cacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 12278885 - 12278833
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttgg 74  Q
    ||||||||||| ||||||||||| | ||||||| ||||||||| | |||||||    
T  12278885 cacatataattacactgaattatgtcattttcttaaattattatcagtgttgg 12278833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 21828414 - 21828482
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    |||||| |||| || || ||||| |||||||||||||||| || |||||| |||||||| || ||||||    
T  21828414 cacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 43250039 - 43249975
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||| ||||| | ||||||||||||||||| | |||| |||||||| || ||||||    
T  43250039 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 43249975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 90890 - 90835
Alignment:
Q  25 atataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||| |||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtc 90835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 44534 - 44583
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  44534 cacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 92851 - 92790
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| |||||||| || |||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 1677 - 1633
Alignment:
Q  39 aattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  1677 aattatatgattttctcaaattattaacggtgtcggcgtgtctgt 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 13444 - 13382
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||||||||||||||||  |||| |||||||| || ||||||    
T  13444 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 21883 - 21945
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||||||||||||||||  |||| |||||||| || ||||||    
T  21883 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 21945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 8054 - 7996
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatc 86  Q
    ||||| ||||| ||||||||||||| ||||||||||||  |||| ||||||||||||||    
T  8054 taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatc 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 51855 - 51793
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| |||||||| || ||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 53226 - 53172
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||| | ||||||||    
T  53226 tataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtc 53172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 9756 - 9817
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    ||||||||||| ||||||||||  |||||||||||||||||||| || || ||| |||||||    
T  9756 cacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgt 9817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 135321 - 135370
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgt 71  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  135321 cacatataattacacagaattatgtgattttctcaaattattagcagtgt 135370  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 20216 - 20164
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 20164  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 63817 - 63773
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgtt 72  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  63817 taattgcactgaattatgtaattttctcaaattattagcggtgtt 63773  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 263385 - 263449
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||||| ||||||||||| || |||||||||||||||||| |||||| | |||| || ||||||    
T  263385 tataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtg 263449  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 33378 - 33433
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgt 83  Q
    ||||| ||||||||||| | ||||| ||||||||||||| |||| |||||||||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtctgt 33433  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 1085 - 1027
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    |||||||| || ||||||||||| | ||||| |||||||||||||||||| || |||||    
T  1085 cacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtc 1027  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 8842 - 8780
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgtg 90  Q
    ||||| |||| ||| |||||||||| ||||||||||||| |||| |||||||| || ||||||    
T  8842 taattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 8780  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 28900 - 28843
Alignment:
Q  22 cacatataatttcactgaattatatgattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||| || ||||||||  |||||||| ||||||||| |||||| |||||||    
T  28900 cacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgt 28843  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 192264 - 192325
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtctgtatccgt 89  Q
    ||||| ||| ||||||| | ||||||||||||||||| |||||| |||||||| || |||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 14574 - 14522
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||||  |||| ||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

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Target: scaffold0279 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 17904 - 17936
Alignment:
Q  47 gattttctcaaattattagcggtgttggcgtgt 79  Q
    ||||||||||||||||||||||||| |||||||    
T  17904 gattttctcaaattattagcggtgtaggcgtgt 17936  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 46726 - 46674
Alignment:
Q  28 taatttcactgaattatatgattttctcaaattattagcggtgttggcgtgtc 80  Q
    ||||| ||||||||||| ||||||| ||||||||||| | |||| ||||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtc 46674  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 68255 - 68299
Alignment:
Q  26 tataatttcactgaattatatgattttctcaaattattagcggtg 70  Q
    |||||||  ||| |||||||||||||||||||||||||| |||||    
T  68255 tataattatactaaattatatgattttctcaaattattaacggtg 68299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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