View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0199-INSERTION-6 (Length: 673)

Name: NF0199-INSERTION-6
Description: NF0199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0199-INSERTION-6
NF0199-INSERTION-6
[»] chr4 (33 HSPs)
chr4 (77-673)||(54986138-54986736)
chr4 (8-82)||(54985662-54985736)
chr4 (393-464)||(4191665-4191738)
chr4 (395-458)||(51044532-51044597)
chr4 (397-502)||(30024588-30024694)
chr4 (423-464)||(2980574-2980615)
chr4 (397-505)||(22684592-22684701)
chr4 (410-505)||(8422926-8423022)
chr4 (408-463)||(47970245-47970301)
chr4 (412-458)||(21683570-21683617)
chr4 (401-473)||(24371033-24371107)
chr4 (401-451)||(38478681-38478732)
chr4 (397-459)||(42321955-42322018)
chr4 (397-462)||(4071811-4071876)
chr4 (406-451)||(6364088-6364134)
chr4 (424-502)||(8356667-8356744)
chr4 (408-481)||(24443947-24444021)
chr4 (396-505)||(24929378-24929488)
chr4 (410-451)||(25487634-25487676)
chr4 (426-500)||(38326154-38326228)
chr4 (397-445)||(21952906-21952955)
chr4 (424-481)||(24193494-24193551)
chr4 (407-464)||(32920486-32920542)
chr4 (424-481)||(41241648-41241705)
chr4 (396-464)||(51555943-51556011)
chr4 (424-464)||(11262857-11262897)
chr4 (408-499)||(36734784-36734876)
chr4 (424-464)||(41050622-41050662)
chr4 (397-464)||(49219065-49219133)
chr4 (424-464)||(52645626-52645666)
chr4 (424-452)||(52645853-52645881)
chr4 (397-444)||(52735068-52735116)
chr4 (397-464)||(54325113-54325181)
[»] chr2 (31 HSPs)
chr2 (77-245)||(7883891-7884059)
chr2 (8-82)||(7883225-7883299)
chr2 (406-503)||(31461325-31461423)
chr2 (424-505)||(33197343-33197424)
chr2 (412-483)||(43808483-43808555)
chr2 (576-635)||(7883687-7883746)
chr2 (424-463)||(13864577-13864616)
chr2 (393-451)||(32098380-32098439)
chr2 (398-460)||(35755579-35755642)
chr2 (427-464)||(9478225-9478262)
chr2 (408-464)||(38239638-38239695)
chr2 (396-464)||(40672871-40672940)
chr2 (397-449)||(40837504-40837557)
chr2 (424-505)||(42974237-42974318)
chr2 (393-461)||(44606160-44606229)
chr2 (423-483)||(5867294-5867354)
chr2 (408-452)||(29430694-29430738)
chr2 (397-464)||(37053520-37053588)
chr2 (420-503)||(2400043-2400126)
chr2 (397-463)||(3673734-3673801)
chr2 (395-505)||(15171135-15171246)
chr2 (397-483)||(28803582-28803669)
chr2 (397-464)||(35809859-35809926)
chr2 (412-451)||(40682465-40682504)
chr2 (409-458)||(5045245-5045295)
chr2 (395-464)||(38355145-38355214)
chr2 (397-461)||(11344360-11344425)
chr2 (408-464)||(17952788-17952845)
chr2 (400-464)||(35459836-35459901)
chr2 (397-464)||(14209203-14209271)
chr2 (397-464)||(33267592-33267660)
[»] scaffold0590 (1 HSPs)
scaffold0590 (408-507)||(1161-1261)
[»] scaffold0275 (1 HSPs)
scaffold0275 (408-507)||(2714-2814)
[»] scaffold0024 (1 HSPs)
scaffold0024 (397-505)||(27461-27570)
[»] chr6 (36 HSPs)
chr6 (408-503)||(32975865-32975961)
chr6 (400-461)||(24836278-24836340)
chr6 (409-464)||(8010283-8010338)
chr6 (426-501)||(21888363-21888438)
chr6 (397-451)||(29274305-29274360)
chr6 (424-503)||(32408833-32408912)
chr6 (408-463)||(32513752-32513807)
chr6 (408-481)||(2514611-2514685)
chr6 (397-478)||(22742278-22742360)
chr6 (397-453)||(33787821-33787878)
chr6 (424-464)||(31668789-31668829)
chr6 (405-463)||(4248885-4248944)
chr6 (405-464)||(26564885-26564944)
chr6 (408-505)||(9833184-9833282)
chr6 (408-481)||(10452447-10452521)
chr6 (395-464)||(31672542-31672612)
chr6 (426-484)||(33027549-33027607)
chr6 (408-452)||(4420555-4420600)
chr6 (424-481)||(7354113-7354170)
chr6 (397-481)||(7713934-7714019)
chr6 (405-481)||(8349748-8349825)
chr6 (400-460)||(20671944-20672005)
chr6 (424-481)||(28130029-28130086)
chr6 (405-442)||(31776359-31776396)
chr6 (424-505)||(33068665-33068746)
chr6 (405-461)||(34405034-34405091)
chr6 (395-446)||(2205642-2205694)
chr6 (424-464)||(4247738-4247778)
chr6 (424-464)||(5554869-5554909)
chr6 (405-452)||(27893985-27894033)
chr6 (424-464)||(29249400-29249440)
chr6 (424-460)||(31461608-31461644)
chr6 (395-446)||(31583645-31583697)
chr6 (423-451)||(33069629-33069657)
chr6 (424-452)||(33500585-33500613)
chr6 (405-464)||(35095011-35095071)
[»] chr7 (38 HSPs)
chr7 (406-464)||(49060466-49060525)
chr7 (400-464)||(30496630-30496695)
chr7 (425-505)||(27481399-27481479)
chr7 (400-505)||(30133936-30134040)
chr7 (397-451)||(35536046-35536101)
chr7 (395-464)||(7244628-7244698)
chr7 (420-478)||(45078205-45078263)
chr7 (424-505)||(22388008-22388089)
chr7 (397-449)||(28178910-28178963)
chr7 (414-503)||(47559702-47559791)
chr7 (397-452)||(1417202-1417258)
chr7 (424-460)||(2223078-2223114)
chr7 (405-464)||(24973870-24973930)
chr7 (424-464)||(27492721-27492761)
chr7 (424-464)||(39551652-39551692)
chr7 (397-464)||(45593795-45593863)
chr7 (407-481)||(1431394-1431469)
chr7 (429-464)||(27389309-27389344)
chr7 (408-505)||(753291-753389)
chr7 (395-464)||(3241367-3241437)
chr7 (397-450)||(5006585-5006639)
chr7 (424-482)||(11721330-11721388)
chr7 (424-454)||(28702696-28702726)
chr7 (408-505)||(31341079-31341177)
chr7 (408-457)||(35808991-35809041)
chr7 (397-446)||(39591543-39591593)
chr7 (437-503)||(40371713-40371779)
chr7 (411-464)||(46213729-46213783)
chr7 (424-461)||(4591471-4591508)
chr7 (407-451)||(42656454-42656499)
chr7 (408-464)||(47004013-47004070)
chr7 (408-451)||(5276163-5276207)
chr7 (424-464)||(10079444-10079484)
chr7 (397-464)||(27121662-27121730)
chr7 (424-464)||(33894549-33894589)
chr7 (405-448)||(43152986-43153030)
chr7 (424-460)||(46223176-46223212)
chr7 (429-481)||(47528042-47528094)
[»] chr5 (21 HSPs)
chr5 (424-505)||(26516183-26516264)
chr5 (409-505)||(20982223-20982320)
chr5 (406-493)||(6738492-6738580)
chr5 (408-462)||(35135749-35135804)
chr5 (408-465)||(7096214-7096272)
chr5 (429-483)||(13244590-13244644)
chr5 (424-465)||(18704139-18704180)
chr5 (397-500)||(34690764-34690868)
chr5 (397-475)||(28586842-28586921)
chr5 (405-451)||(39128578-39128625)
chr5 (424-486)||(4991047-4991109)
chr5 (425-463)||(9860903-9860941)
chr5 (405-458)||(21782653-21782707)
chr5 (408-481)||(37063161-37063235)
chr5 (408-505)||(39257473-39257571)
chr5 (424-481)||(14714943-14715000)
chr5 (424-461)||(29588809-29588846)
chr5 (408-464)||(35960340-35960397)
chr5 (412-451)||(12407752-12407792)
chr5 (424-464)||(13224355-13224395)
chr5 (405-464)||(35095867-35095927)
[»] chr1 (32 HSPs)
chr1 (397-449)||(45999364-45999417)
chr1 (408-480)||(45107533-45107605)
chr1 (408-464)||(23895262-23895319)
chr1 (395-451)||(50319231-50319288)
chr1 (398-505)||(12519047-12519155)
chr1 (397-464)||(44032075-44032143)
chr1 (395-445)||(26293180-26293231)
chr1 (429-504)||(52013783-52013858)
chr1 (400-452)||(36151584-36151637)
chr1 (412-451)||(2462906-2462946)
chr1 (406-463)||(13037791-13037844)
chr1 (398-464)||(49516995-49517063)
chr1 (397-503)||(600951-601055)
chr1 (397-463)||(17269177-17269244)
chr1 (423-482)||(49125742-49125801)
chr1 (408-505)||(7200929-7201027)
chr1 (395-444)||(14737779-14737829)
chr1 (427-465)||(24857621-24857659)
chr1 (425-479)||(26679185-26679239)
chr1 (395-464)||(38651483-38651553)
chr1 (408-505)||(44936677-44936775)
chr1 (405-462)||(46499938-46499996)
chr1 (397-449)||(6933037-6933090)
chr1 (395-451)||(6976887-6976944)
chr1 (397-457)||(15360827-15360888)
chr1 (424-505)||(35350506-35350587)
chr1 (432-505)||(38758559-38758632)
chr1 (398-450)||(40357963-40358016)
chr1 (395-464)||(48748657-48748726)
chr1 (412-451)||(172668-172708)
chr1 (401-464)||(30259567-30259631)
chr1 (424-464)||(33339524-33339564)
[»] chr8 (22 HSPs)
chr8 (426-502)||(43208239-43208315)
chr8 (397-505)||(4558683-4558792)
chr8 (405-464)||(14482128-14482188)
chr8 (398-460)||(42597331-42597394)
chr8 (397-463)||(8536125-8536191)
chr8 (397-449)||(1470932-1470985)
chr8 (432-505)||(2107438-2107511)
chr8 (424-505)||(5226487-5226568)
chr8 (408-503)||(34563137-34563233)
chr8 (397-451)||(31915345-31915400)
chr8 (408-482)||(39392748-39392823)
chr8 (397-450)||(13561388-13561442)
chr8 (395-464)||(14949814-14949884)
chr8 (406-480)||(26716523-26716596)
chr8 (408-481)||(35869746-35869820)
chr8 (397-505)||(7026616-7026725)
chr8 (405-455)||(33697041-33697087)
chr8 (396-464)||(40357825-40357894)
chr8 (408-464)||(40728505-40728562)
chr8 (424-464)||(8629035-8629075)
chr8 (412-451)||(26215435-26215475)
chr8 (423-451)||(37220255-37220283)
[»] chr3 (35 HSPs)
chr3 (77-264)||(18397674-18397861)
chr3 (397-477)||(38462194-38462275)
chr3 (424-505)||(43116532-43116613)
chr3 (425-481)||(13804697-13804753)
chr3 (424-464)||(36445658-36445698)
chr3 (397-464)||(44374720-44374788)
chr3 (397-450)||(1395611-1395665)
chr3 (395-464)||(44284132-44284202)
chr3 (424-481)||(41028955-41029012)
chr3 (405-452)||(2128335-2128383)
chr3 (397-464)||(32703064-32703132)
chr3 (396-451)||(40122827-40122883)
chr3 (438-501)||(29094270-29094333)
chr3 (414-464)||(48528504-48528555)
chr3 (397-451)||(2865735-2865789)
chr3 (395-464)||(16790430-16790500)
chr3 (421-451)||(20669563-20669593)
chr3 (406-447)||(34318031-34318073)
chr3 (398-451)||(48364956-48365010)
chr3 (397-446)||(49586992-49587042)
chr3 (397-445)||(15304423-15304472)
chr3 (410-483)||(40321125-40321198)
chr3 (397-449)||(42809242-42809295)
chr3 (408-464)||(47584400-47584457)
chr3 (400-464)||(49772747-49772812)
chr3 (409-464)||(905058-905114)
chr3 (397-464)||(3182438-3182506)
chr3 (10-82)||(18396011-18396083)
chr3 (469-505)||(20143824-20143860)
chr3 (408-451)||(20192693-20192737)
chr3 (469-505)||(23269329-23269365)
chr3 (424-464)||(25964368-25964408)
chr3 (397-464)||(33307656-33307724)
chr3 (424-452)||(44488822-44488850)
chr3 (398-449)||(51278234-51278286)
[»] scaffold0091 (1 HSPs)
scaffold0091 (424-505)||(5904-5985)
[»] scaffold0654 (1 HSPs)
scaffold0654 (397-464)||(6713-6781)
[»] scaffold0014 (1 HSPs)
scaffold0014 (397-464)||(116632-116700)
[»] scaffold0110 (1 HSPs)
scaffold0110 (431-505)||(34023-34097)
[»] scaffold0455 (1 HSPs)
scaffold0455 (424-481)||(8616-8673)


Alignment Details
Target: chr4 (Bit Score: 541; Significance: 0; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 541; E-Value: 0
Query Start/End: Original strand, 77 - 673
Target Start/End: Complemental strand, 54986736 - 54986138
Alignment:
Q  77 caattgcagcaccaagggcattgtttggctgaattggtgtgtggaagataatgatcgaagagacaataaccgagattctcttcatcgtgttccctatgct 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54986736 caattgcagcaccaagggcattgtttggctgaattggtgtgtggaagataatgatcgaagagacaataaccgagattctcttcatcgtgttccctatgct 54986637  T
Q  177 aaatgttaatggagaaatctgatccagagacatataagagacttgattgtacaagtgatagaacacactctgtgcggctacccacctgaaaaaattacaa 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54986636 aaatgttaatggagaaatctgatccagagacatataagagacttgattgtacaagtgatagaacacactctgtgcggctacccacctgaaaaaattacaa 54986537  T
Q  277 cccataagttcattagtccaatgacaaacactaaagaataatt--tgtagctcctccatagaccccttttgaagaagcattatcaatattcatggtcaag 374  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54986536 cccataagttcattagtccaatgacaaacactatagaataattcttgtagctcctccatagaccc-ttttgaagaagcattatcaatattcatggtcaag 54986438  T
Q  375 ggtctgtttggaaaaaacaacttatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttat 474  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54986437 tgtctgtttggaaaaaacaacttatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttat 54986338  T
Q  475 gctataaacttttatttaagttgtttatccacaaaaagaccttaaagatataatggatatgaaatagcacacagcaatgggtttagatgtgtagattgtt 574  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  54986337 gctataaacttttatttaagttgtttatccacaaaaagaccttaaagatataatggatatgaaatagcacacagcaatgggttgagatttgtagattgtt 54986238  T
Q  575 atgcttaccagacaaaattgggaccaatct-gggacactgctgtttgccagccagcagcccacatcttcgggccttcgacagcaatagcaagaggggtga 673  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  54986237 atgcttaccagacaaaattgggaccaatttggggacactgctgtttgccagccagcagcccacatcgttgggccttcgacagcaatagcaaaaggggtga 54986138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 54985736 - 54985662
Alignment:
Q  8 ctccacttttgattatgtgtgtaaatgaaactgcaactttggacatactcacagtagccgcaacatgcccaattg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54985736 ctccacttttgattatgtgtgtaaatgaaactgcaactttggacatactcacagtagccgcaacatgcccaattg 54985662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 4191738 - 4191665
Alignment:
Q  393 aacttatgaaagcaatttgactttatctt-at-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||| || ||||||||||| || || ||||||||||||||||||||||||||||  |||||||||||    
T  4191738 aacttatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgat 4191665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 458
Target Start/End: Original strand, 51044532 - 51044597
Alignment:
Q  395 cttatgaaagcaa-tttgactttatcttat-ttttgttatagaaatagcttatacataaaaactta 458  Q
    ||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  51044532 cttatgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 30024694 - 30024588
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagt 495  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||| ||||| |||||  |||||||||||   || || | ||||||||  ||| ||||||    
T  30024694 tatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaacgcttctactataaacacttaattaagt 30024595  T
Q  496 tgtttat 502  Q
    |||||||    
T  30024594 tgtttat 30024588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 2980574 - 2980615
Alignment:
Q  423 tttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  2980574 tttttgttatagaaatagcttatacataagcacttatatgat 2980615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 505
Target Start/End: Original strand, 22684592 - 22684701
Alignment:
Q  397 tatgaaagcaatttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagt 495  Q
    ||||||| |||||||||||||| |||   |||||||||||||||||||||||| ||  | |||||||||  |||  |||| ||||| |  ||| ||||||    
T  22684592 tatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgataagcgcatatggtataagcaattaattaagt 22684691  T
Q  496 tgtttatcca 505  Q
    ||||||||||    
T  22684692 tgtttatcca 22684701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 410 - 505
Target Start/End: Original strand, 8422926 - 8423022
Alignment:
Q  410 tgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||| |||| |||| ||||| |||||||||||||||||  || ||||||||    | |||||||||||||  ||| ||||||||||||||||    
T  8422926 tgactttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataaacacttaattaagttgtttatcca 8423022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 47970301 - 47970245
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    |||||||| || |||| ||||||||||||||||||||||||||||  ||||||||||    
T  47970301 tttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 458
Target Start/End: Original strand, 21683570 - 21683617
Alignment:
Q  412 actttatcttat-ttttgttatagaaatagcttatacataaaaactta 458  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  21683570 actttatcttatcttttgttatagaaatagtttatacataaacactta 21683617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 24371033 - 24371107
Alignment:
Q  401 aaagcaatttgactttatcttattttt--gttatagaaatagcttatacataaaaacttatatgattggcgttta 473  Q
    |||||||||||| ||||| |||| |||  |||||||||||||||||| |  || |||||||||||| ||||||||    
T  24371033 aaagcaatttgaatttattttatcttttggttatagaaatagcttatgccaaagaacttatatgataggcgttta 24371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 38478732 - 38478681
Alignment:
Q  401 aaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataa 451  Q
    |||||| |||||||||||||||| || ||||||||||||||||||| |||||    
T  38478732 aaagcagtttgactttatcttatcttgtgttatagaaatagcttattcataa 38478681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 42321955 - 42322018
Alignment:
Q  397 tatgaaagcaatttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttat 459  Q
    ||||||| |||||||||||||| ||||  ||||||||| ||||||||||| |||||| ||||||    
T  42321955 tatgaaaacaatttgactttattttatcatttgttataaaaatagcttattcataaacacttat 42322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 4071876 - 4071811
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatg 462  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||||||    
T  4071876 tatgaaaataatttgactttattttatcttttgttatagaaatag-ttatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 6364134 - 6364088
Alignment:
Q  406 aatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  6364134 aatttcactttattttatcttttgttatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 502
Target Start/End: Complemental strand, 8356744 - 8356667
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttat 502  Q
    ||||||||| ||||||||||| | ||||| |||||||| ||| | | ||||||||||||| |||| | |||||||||||    
T  8356744 ttttgttatcgaaatagcttaga-ataaatacttatattattagtgcttatgctataaacgtttaatcaagttgtttat 8356667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 24444021 - 24443947
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||| ||||| |||| ||||||| ||||||| |||||||||||| ||||||||||||  | | |||||||||||    
T  24444021 tttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataa 24443947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 24929488 - 24929378
Alignment:
Q  396 ttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaag 494  Q
    |||||||| || || |||||||| |||| ||||||||||||||||| | ||||| ||| | |||||||||  | | ||||| |||||||  | | |||||    
T  24929488 ttatgaaaacagttagactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataagagattatgttataaacactcaattaag 24929389  T
Q  495 ttgtttatcca 505  Q
    |||||||||||    
T  24929388 ttgtttatcca 24929378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 451
Target Start/End: Original strand, 25487634 - 25487676
Alignment:
Q  410 tgactttatcttatttt-tgttatagaaatagcttatacataa 451  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  25487634 tgactttattttattttttgttatagaaatagcttatacataa 25487676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 500
Target Start/End: Original strand, 38326154 - 38326228
Alignment:
Q  426 ttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgttt 500  Q
    |||||||||||| |||||| |||||| ||||||| ||||  ||| |||||||||||||  ||| ||||| |||||    
T  38326154 ttgttatagaaagagcttacacataagaacttatttgatgagcgcttatgctataaacacttagttaagctgttt 38326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 21952955 - 21952906
Alignment:
Q  397 tatgaaagcaatttgactttatcttattt-ttgttatagaaatagcttat 445  Q
    ||||||| |||||||||||||| ||| || ||||||||||||||||||||    
T  21952955 tatgaaaacaatttgactttattttacttgttgttatagaaatagcttat 21952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 24193551 - 24193494
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||| || ||||| |||||||||||  |||||||||||  |||||||||||||||    
T  24193551 ttttgttgtaaaaataacttatacataagtacttatatgataagcgtttatgctataa 24193494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 32920486 - 32920542
Alignment:
Q  407 atttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||| |||| || |||||| ||||||||||| |||||| |||||||||||    
T  32920486 atttgactttattttatctt-gttataaaaatagcttatccataaacacttatatgat 32920542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 41241648 - 41241705
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||||||||||||| ||| ||  ||||||||||| | || |||||||||||    
T  41241648 ttttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataa 41241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 51555943 - 51556011
Alignment:
Q  396 ttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||| |||| ||||||||| |||| ||||||||||  ||||||||||||||||  |||||||||||    
T  51555943 ttatgaaa-caatctgactttattttatcttttgttataataatagcttatacataagcacttatatgat 51556011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 11262857 - 11262897
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||| |||||||||||| ||||||||||| |||||||||||    
T  11262857 ttttattatagaaataggttatacataaatacttatatgat 11262897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 499
Target Start/End: Complemental strand, 36734876 - 36734784
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtt 499  Q
    ||||||||||| |||  |||||||||||||| || ||||||||||  |||||||||||    || |||| ||||| |||||| ||||||||||    
T  36734876 tttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataaaggtatatgttataagcttttaattaagttgtt 36734784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 41050662 - 41050622
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||| |||||||| || |||||||||||    
T  41050662 ttttgttatagaaatagtttatacattaacacttatatgat 41050622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 49219133 - 49219065
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||  ||||||||||||| |||| |||||||||||||||| ||||||| |||  ||| |||||||    
T  49219133 tatgaaaataatttgactttattttatattttgttatagaaataacttatacctaaccactcatatgat 49219065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 52645666 - 52645626
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  52645666 ttttgttacagaaatagctcatacataaacacttatatgat 52645626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 452
Target Start/End: Original strand, 52645853 - 52645881
Alignment:
Q  424 ttttgttatagaaatagcttatacataaa 452  Q
    |||||||||||||||||||||||||||||    
T  52645853 ttttgttatagaaatagcttatacataaa 52645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 52735116 - 52735068
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagctta 444  Q
    |||||||| ||||||||||||| |||| |||||||| ||||||||||||    
T  52735116 tatgaaagtaatttgactttattttatcttttgttacagaaatagctta 52735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 54325113 - 54325181
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| || ||||||||||| |||| |||||| |||||||||| ||||||| ||  |||||||||||    
T  54325113 tatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgat 54325181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 245
Target Start/End: Complemental strand, 7884059 - 7883891
Alignment:
Q  77 caattgcagcaccaagggcattgtttggctgaattggtgtgtggaagataatgatcgaagagacaataaccgagattctcttcatcgtgttccctatgct 176  Q
    |||| ||||| ||||| |||||| | || |||| ||||||||| ||||||||||| |||||||| || || || ||||||||||| || || ||||||||    
T  7884059 caatggcagctccaagagcattgatgggttgaagtggtgtgtgaaagataatgatggaagagactattacagaaattctcttcattgtatttcctatgct 7883960  T
Q  177 aaatgttaatggagaaatctgatccagagacatataagagacttgattgtacaagtgatagaacacact 245  Q
    ||||||||| |||||||||||||| |||||||| || || |||||||| || || || |||||||||||    
T  7883959 aaatgttaagggagaaatctgatcaagagacatgtatgacacttgattatataaatggtagaacacact 7883891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 7883299 - 7883225
Alignment:
Q  8 ctccacttttgattatgtgtgtaaatgaaactgcaactttggacatactcacagtagccgcaacatgcccaattg 82  Q
    ||||||| ||||| ||||| || ||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  7883299 ctccactcttgatgatgtgagtgaatgaaactgctactttggacatactcacagttgcagcaacatgcccaattg 7883225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 31461423 - 31461325
Alignment:
Q  406 aatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||  |||||||||||   ||||||||||| ||    ||| ||||||||||||||    
T  31461423 aatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaagttgtttatc 31461325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 33197343 - 33197424
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||||||||||||| ||||  |||||||||||  ||||||||| |||||   |||| || |||||||||||||    
T  33197343 ttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaatttagttgtttatcca 33197424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 43808555 - 43808483
Alignment:
Q  412 actttatcttatttttgttatagaaa-tagcttatacataaaaacttatatgattggcgtttatgctataaac 483  Q
    ||||||| |||| ||||||||| ||| ||||||||||||||| |||||||||||  ||| |||||||||||||    
T  43808555 actttattttatgtttgttataaaaaatagcttatacataaacacttatatgatacgcgcttatgctataaac 43808483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 576 - 635
Target Start/End: Complemental strand, 7883746 - 7883687
Alignment:
Q  576 tgcttaccagacaaaattgggaccaatctgggacactgctgtttgccagccagcagccca 635  Q
    |||||||||||||||||| |||||||| || ||||| |||||||||||||| ||| ||||    
T  7883746 tgcttaccagacaaaattcggaccaatttgagacacagctgtttgccagcctgcaaccca 7883687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 463
Target Start/End: Complemental strand, 13864616 - 13864577
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  13864616 ttttgttatagaaatagcttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 32098380 - 32098439
Alignment:
Q  393 aacttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||||||| || ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  32098380 aacttatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataa 32098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 398 - 460
Target Start/End: Original strand, 35755579 - 35755642
Alignment:
Q  398 atgaaagcaatttgactttatcttatttttg-ttatagaaatagcttatacataaaaacttata 460  Q
    |||||| |||||||||||||| || | |||| |||||||||||||||||||||||| |||||||    
T  35755579 atgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacacttata 35755642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 464
Target Start/End: Complemental strand, 9478262 - 9478225
Alignment:
Q  427 tgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9478262 tgttatagaaatagcttatacataaacacttatatgat 9478225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 464
Target Start/End: Original strand, 38239638 - 38239695
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||| || |||| ||||||||||||||||||||||||||||| ||||| |||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacacttacatgat 38239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 40672871 - 40672940
Alignment:
Q  396 ttatgaaagcaatttgactttatcttatttttgtt-atagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||| |||| ||||||||| |||| ||| || ||||||||| |||||||||||||||||| |||||    
T  40672871 ttatgaaaacaatgtgactttattttatcttttttcatagaaataacttatacataaaaacttaaatgat 40672940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 40837504 - 40837557
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    ||||||| |||||||||||||  |||| ||||||||||||||||||||||||||    
T  40837504 tatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 42974318 - 42974237
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||||||| ||||||| ||  ||| |||||||  | ||||||||||||| || ||| |||||||| |||||||    
T  42974318 ttttgttatagaaatagtttatacacaagcactaatatgataagtgtttatgctataagctcttaattaagttgcttatcca 42974237  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 44606160 - 44606229
Alignment:
Q  393 aacttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatat 461  Q
    ||||||||||| ||||| | |||||| |||| |||||||||  |||||||||||||||||| ||||||||    
T  44606160 aacttatgaaaacaattggtctttattttatcttttgttatgaaaatagcttatacataaacacttatat 44606229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 5867294 - 5867354
Alignment:
Q  423 tttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaac 483  Q
    |||||||| ||||||||||||| ||||||| |||||||||||  | ||| |||||||||||    
T  5867294 tttttgttttagaaatagcttagacataaatacttatatgataagtgttgatgctataaac 5867354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 29430738 - 29430694
Alignment:
Q  408 tttgactttatcttatttttgttatagaaatagcttatacataaa 452  Q
    ||||||||||| | | |||||||||||||||||||||||||||||    
T  29430738 tttgactttatttaacttttgttatagaaatagcttatacataaa 29430694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 37053588 - 37053520
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| || ||||||||||| ||||||| ||||||||||||||  |||||||||  |||||||||||    
T  37053588 tatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgat 37053520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 503
Target Start/End: Complemental strand, 2400126 - 2400043
Alignment:
Q  420 ttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    |||| ||||||||||||| | |||||||||||  |||||||||||    |||||||| |||||| |||| ||||| ||||||||    
T  2400126 ttatctttgttatagaaacaacttatacataagcacttatatgataattgtttatgccataaacatttaattaaggtgtttatc 2400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 3673801 - 3673734
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||| || ||||||||  ||||||||||    
T  3673801 tatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 505
Target Start/End: Complemental strand, 15171246 - 15171135
Alignment:
Q  395 cttatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaa 493  Q
    ||||||||| || ||||||||||  |||| || ||||||||||| | |||||||||||| |||||||  ||  | | |||||||||||||  ||| ||||    
T  15171246 cttatgaaaacattttgactttaatttatcttctgttatagaaaaaacttatacataaacacttataaaatacgagcttatgctataaacacttaattaa 15171147  T
Q  494 gttgtttatcca 505  Q
    ||| ||||||||    
T  15171146 gttatttatcca 15171135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 483
Target Start/End: Original strand, 28803582 - 28803669
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaac 483  Q
    ||||||| || ||||||||||| |||| ||||||||| |||||| |||||| ||||  |||||||||||  || ||||||| ||||||    
T  28803582 tatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataaac 28803669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 35809926 - 35809859
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| |||||||| ||||| |||| ||||| || |||||| |||||||||||  |||||||||||    
T  35809926 tatgaaaacaatttgattttattttatctttgtcatggaaataacttatacataagcacttatatgat 35809859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 451
Target Start/End: Original strand, 40682465 - 40682504
Alignment:
Q  412 actttatcttatttttgttatagaaatagcttatacataa 451  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  40682465 actttatgttatttttgctatagaaatagcttatacataa 40682504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 458
Target Start/End: Original strand, 5045245 - 5045295
Alignment:
Q  409 ttgactttatcttat-ttttgttatagaaatagcttatacataaaaactta 458  Q
    |||||||||| |||| |||||||||| |||||||||||||||||| |||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 38355214 - 38355145
Alignment:
Q  395 cttatgaaagcaatttgactttatcttattttt-gttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| |||||||||| ||| |||||||  ||||||||||||||||||| ||||  |||||||||||    
T  38355214 cttatgaaaacaatttgactctattttattttacgttatagaaatagcttata-ataagtacttatatgat 38355145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 11344360 - 11344425
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatat 461  Q
    ||||||| |||||||||||| | |||| |||||||||||||||| ||||| |||||  ||||||||    
T  11344360 tatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatat 11344425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 464
Target Start/End: Original strand, 17952788 - 17952845
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||   ||||||||||    
T  17952788 tttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgat 17952845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 35459901 - 35459836
Alignment:
Q  400 gaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||| |||||||||||||| |||| ||||| |||| |||||||||||||| ||  |||||||||||    
T  35459901 gaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgat 35459836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 14209271 - 14209203
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| || ||||| ||||| |||| ||||||||| ||||||||||| ||| ||| |||||||||||    
T  14209271 tatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgat 14209203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 33267592 - 33267660
Alignment:
Q  397 tatgaaagcaatttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| || ||| ||||||| ||| | |||||||||||||||| ||||||||||  |||||||||||    
T  33267592 tatgaaaacagtttaactttattttactgtttgttatagaaatagattatacataagcacttatatgat 33267660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 408 - 507
Target Start/End: Original strand, 1161 - 1261
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatccac 506  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||    ||| |||||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatccac 1260  T
Q  507 a 507  Q
    |    
T  1261 a 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 408 - 507
Target Start/End: Complemental strand, 2814 - 2714
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatccac 506  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||    ||| |||||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatccac 2715  T
Q  507 a 507  Q
    |    
T  2714 a 2714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 397 - 505
Target Start/End: Complemental strand, 27570 - 27461
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagt 495  Q
    ||||||| |||||||||||||| |||| || ||||||||||||| |||||||||||  ||||| |||||  | | ||||||||||| | |||||||||||    
T  27570 tatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcgtttatttaagt 27471  T
Q  496 tgtttatcca 505  Q
    ||||||||||    
T  27470 tgtttatcca 27461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 408 - 503
Target Start/End: Complemental strand, 32975961 - 32975865
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    ||||||||||| |||| |||||||| ||||||| |||||||||||| ||||||||||   ||| |||||||||||||  ||| ||||||||||||||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgtttatc 32975865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 24836278 - 24836340
Alignment:
Q  400 gaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatat 461  Q
    |||| |||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||    
T  24836278 gaaaacaatttgactttattttatcttttgttatagaaataacttatacataaatacttatat 24836340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 464
Target Start/End: Complemental strand, 8010338 - 8010283
Alignment:
Q  409 ttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||| ||||| |||||||||||||||||||||| |||  |||||||||||    
T  8010338 ttgactttattttattgttgttatagaaatagcttatacctaagcacttatatgat 8010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 501
Target Start/End: Complemental strand, 21888438 - 21888363
Alignment:
Q  426 ttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgttta 501  Q
    |||||| |||||||| ||||||||||| |||||||||||    ||||| |||||||||| ||| ||||||||||||    
T  21888438 ttgttacagaaatagattatacataaacacttatatgataatagtttaagctataaactcttaattaagttgttta 21888363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 29274305 - 29274360
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||| |||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  29274305 tatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataa 29274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 503
Target Start/End: Complemental strand, 32408912 - 32408833
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    ||||||| |||||||||||||||||| || | |||||||||    |||||||||||||||  ||| ||||||||||||||    
T  32408912 ttttgttgtagaaatagcttatacatcaacatttatatgatcatagtttatgctataaacacttaattaagttgtttatc 32408833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 32513807 - 32513752
Alignment:
Q  408 tttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||| ||| ||||||    
T  32513807 tttgactttattttatttttgttatagaaataacttatgcataaacactaatatga 32513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 2514685 - 2514611
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||  ||||| |||||  || ||||||||||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataa 2514611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 478
Target Start/End: Complemental strand, 22742360 - 22742278
Alignment:
Q  397 tatgaaagcaatttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgcta 478  Q
    ||||||| |||||||||||||| ||||  ||||||||| |||||||||||| |||| |||||||| |||  ||| ||||||||    
T  22742360 tatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttatgcta 22742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 33787821 - 33787878
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaa 453  Q
    ||||||| |||||||||||| | |||| ||||||||||||||||| ||||||||||||    
T  33787821 tatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacataaaa 33787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 31668789 - 31668829
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  31668789 ttttgttatagaaatagcttatacataagcacttatatgat 31668829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 4248944 - 4248885
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    |||||||||||||| |||| ||||||||| ||||||||||||| ||||  ||||||||||    
T  4248944 caatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatga 4248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 26564885 - 26564944
Alignment:
Q  405 caatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||| || |||||||||||||||| ||||||  ||||  |||||||||||    
T  26564885 caatttgactttattttgtttttgttatagaaatggcttatggataagcacttatatgat 26564944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 9833184 - 9833282
Alignment:
Q  408 tttgactttatcttattt-ttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||| |||||| |||| ||||||||| |||||| | ||  |||||||||||   || ||||| |||||||  ||| ||||||||||||||||    
T  9833184 tttgactttattttatttattgtaatagaaatatcttatagagaagcacttatatgataaacgcttatgttataaacacttaattaagttgtttatcca 9833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 10452447 - 10452521
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||  ||| ||||||| | |  |||||||||||    
T  10452447 tttgattttattttatattttgttatagaaatagcttatacataagcactgatatgatagccacttatgctataa 10452521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 31672542 - 31672612
Alignment:
Q  395 cttatgaaagcaatttgactttatcttattttt-gttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| || ||||||||||| |||||||| || || ||||||| ||||||||||| |||| ||||||    
T  31672542 cttatgaaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgat 31672612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 484
Target Start/End: Complemental strand, 33027607 - 33027549
Alignment:
Q  426 ttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaact 484  Q
    |||||||||||||||| ||||||||| | |||||||| |  ||| ||||||||||||||    
T  33027607 ttgttatagaaatagcatatacataagagcttatatggtaagcgcttatgctataaact 33027549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 4420600 - 4420555
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaa 452  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  4420600 tttgactttattttatcttttgttatagaagtagcttatacataaa 4420555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 7354170 - 7354113
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||||||||| |||||||| ||||||| |||||   || ||||||||||||    
T  7354170 ttttgttatagaaatagtttatacatgaaaacttgtatgaaaagcatttatgctataa 7354113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 7714019 - 7713934
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||| |||||||||||||| |||| |||||||||  || ||| ||||||||||   |||||||||| || | |||||||||||    
T  7714019 tatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgataggtggttatgctataa 7713934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 481
Target Start/End: Original strand, 8349748 - 8349825
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    |||||| ||||||| |||| |||||||| |||||||| ||||||| ||| |||||||||||  | | |||||||||||    
T  8349748 caatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataa 8349825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 20671944 - 20672005
Alignment:
Q  400 gaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttata 460  Q
    |||| |||||||||||||| |||| ||||| | ||||||||||||||||||||  |||||||    
T  20671944 gaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttata 20672005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 28130029 - 28130086
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||||||||||||| ||| ||  ||||||||||| | || |||||||||||    
T  28130029 ttttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataa 28130086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 442
Target Start/End: Original strand, 31776359 - 31776396
Alignment:
Q  405 caatttgactttatcttatttttgttatagaaatagct 442  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  31776359 caatttgactttattttatttgtgttatagaaatagct 31776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 33068665 - 33068746
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||||||||||||| |||||||||||  | |||| ||||  ||| |||||||||||||  ||| ||||| |||| |||||    
T  33068665 ttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaacacttaattaagctgttcatcca 33068746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 34405091 - 34405034
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatat 461  Q
    |||||||||||||| |||  |||| |||||||||||||||||| ||||| ||||||||    
T  34405091 caatttgactttattttaacttttattatagaaatagcttatagataaacacttatat 34405034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 2205642 - 2205694
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttata 446  Q
    ||||||||| |||||||||||| | |||| ||||||| |||||||||||||||    
T  2205642 cttatgaaaacaatttgactttgttttatcttttgttttagaaatagcttata 2205694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 4247738 - 4247778
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||||||||||||  ||||| |||||    
T  4247738 ttttgttatagaaatagcttatacataagcacttacatgat 4247778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 5554869 - 5554909
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||||| |||||||||||| || ||||||||    
T  5554869 ttttgttatagaaataacttatacataaacacgtatatgat 5554909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 27894033 - 27893985
Alignment:
Q  405 caatttgactttatcttatttt-tgttatagaaatagcttatacataaa 452  Q
    |||||||||||||| |||| || |||| |||||||||||||||||||||    
T  27894033 caatttgactttattttatattctgttgtagaaatagcttatacataaa 27893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 29249440 - 29249400
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||| ||||||||  |||||||||||    
T  29249440 ttttgttatagaaatagctgatacataagcacttatatgat 29249400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 460
Target Start/End: Complemental strand, 31461644 - 31461608
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttata 460  Q
    ||||||||||||||||||||||||||||  |||||||    
T  31461644 ttttgttatagaaatagcttatacataagcacttata 31461608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 31583697 - 31583645
Alignment:
Q  395 cttatgaaagcaatttgactttatcttattt-ttgttatagaaatagcttata 446  Q
    ||||||||| ||||||||||| || |||| | |||||||||||||||||||||    
T  31583697 cttatgaaaacaatttgacttcattttatctcttgttatagaaatagcttata 31583645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 451
Target Start/End: Original strand, 33069629 - 33069657
Alignment:
Q  423 tttttgttatagaaatagcttatacataa 451  Q
    |||||||||||||||||||||||||||||    
T  33069629 tttttgttatagaaatagcttatacataa 33069657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 452
Target Start/End: Original strand, 33500585 - 33500613
Alignment:
Q  424 ttttgttatagaaatagcttatacataaa 452  Q
    |||||||||||||||||||||||||||||    
T  33500585 ttttgttatagaaatagcttatacataaa 33500613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 35095011 - 35095071
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| |||| |||| ||||||||||||||| | ||||||||||  |||||||||||    
T  35095011 caatttgacattattttatattttgttatagaaatggtttatacataattacttatatgat 35095071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 406 - 464
Target Start/End: Complemental strand, 49060525 - 49060466
Alignment:
Q  406 aatttgactttatcttattttt-gttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  49060525 aatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgat 49060466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 30496695 - 30496630
Alignment:
Q  400 gaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||| |||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||| ||||    
T  30496695 gaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacacttatgtgat 30496630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 27481399 - 27481479
Alignment:
Q  425 tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||||||||||||||||||||||||| |||||||| ||   | |||||||||||| |   || ||||||||||||||||    
T  27481399 tttgttatagaaatagcttatacataaacacttatataataaacatttatgctataagcacctaattaagttgtttatcca 27481479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 505
Target Start/End: Complemental strand, 30134040 - 30133936
Alignment:
Q  400 gaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgt 498  Q
    |||| ||| |||||||||| |||| ||||||| || |||||||||||||||||| |||  ||||||  ||| ||||||||||| | |||| || ||||||    
T  30134040 gaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacact--tatgataagcgcttatgctataagcatttaattgagttgt 30133943  T
Q  499 ttatcca 505  Q
    |||||||    
T  30133942 ttatcca 30133936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 35536101 - 35536046
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataa 451  Q
    ||||||| |||||||||||||| |||| || |||||||||||||||||||||||||    
T  35536101 tatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataa 35536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 7244698 - 7244628
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| || ||||||||| | |||| ||||| ||||||||||||||||||||||  |||||||||||    
T  7244698 cttatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgat 7244628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 45078263 - 45078205
Alignment:
Q  420 ttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgcta 478  Q
    |||||||||||||| |||||||||||||||||  |||||||||||   |||||||||||    
T  45078263 ttatttttgttataaaaatagcttatacataagcacttatatgataaacgtttatgcta 45078205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 22388008 - 22388089
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||||||||||||||||||| |||||  ||||| |||||  | ||||||| ||||| |  ||| ||||||||||||||||    
T  22388008 ttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataagcgcttaattaagttgtttatcca 22388089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 503
Target Start/End: Original strand, 47559702 - 47559791
Alignment:
Q  414 tttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    ||||| ||||||||||| |||||||| ||||| |||||  |||||||||||| | ||||||  ||||| | | || ||||||||||||||    
T  47559702 tttattttatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcatataattaagttgtttatc 47559791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 1417258 - 1417202
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaa 452  Q
    ||||||| |||||||||||||| |||| |||||||||| |||||| |||||||||||    
T  1417258 tatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaa 1417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 460
Target Start/End: Complemental strand, 2223114 - 2223078
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttata 460  Q
    ||||||||||||||||||||||||||||| |||||||    
T  2223114 ttttgttatagaaatagcttatacataaacacttata 2223078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 24973930 - 24973870
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||| ||||| |||| |||||||||||||||||||| |||||||  |||||||||||    
T  24973930 caatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 27492761 - 27492721
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  27492761 ttttgttatagaaatagtttatacataagaacttatatgat 27492721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 39551652 - 39551692
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  39551652 ttttgttatagaaatagcttatacttaaatacttatatgat 39551692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 45593795 - 45593863
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| || ||||||||||| |||| |||||||| |||||||||||||||||||  | |||||||||    
T  45593795 tatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgat 45593863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 481
Target Start/End: Original strand, 1431394 - 1431469
Alignment:
Q  407 atttgactttatcttatttttg-ttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    |||||||||||| ||||||||  |||| |||||| |||||||||||| |||||||||||  ||  |||||||||||    
T  1431394 atttgactttattttatttttcattatggaaataacttatacataaacacttatatgataagcacttatgctataa 1431469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 464
Target Start/End: Complemental strand, 27389344 - 27389309
Alignment:
Q  429 ttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||||||||||||| |||||||||||    
T  27389344 ttatagaaatagcttatacataaacacttatatgat 27389309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 753291 - 753389
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||| | || |||||||||||||||||  |||||| ||   ||||||||||    |||||||||||||||  ||| ||||||||||||||||    
T  753291 tttgactttatttcatattttgttatagaaatagtgtatacacaagcgcttatatgataaatgtttatgctataaacacttaattaagttgtttatcca 753389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 3241437 - 3241367
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| || ||||||||||| || | |||||||||||||||||||| || ||||  |||||||||||    
T  3241437 cttatgaaaacagtttgactttattttttattttgttatagaaatagcttctatataagcacttatatgat 3241367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 5006585 - 5006639
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacata 450  Q
    ||||||| || ||||||||||| |||| ||||||||||| |||||||||||||||    
T  5006585 tatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 11721330 - 11721388
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaa 482  Q
    ||||||||||||||||| ||||| | ||| |||||||||||  |||||||| |||||||    
T  11721330 ttttgttatagaaatagtttataaagaaacacttatatgataagcgtttattctataaa 11721388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 454
Target Start/End: Complemental strand, 28702726 - 28702696
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaa 454  Q
    |||||||||||||||||||||||||||||||    
T  28702726 ttttgttatagaaatagcttatacataaaaa 28702696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 505
Target Start/End: Complemental strand, 31341177 - 31341079
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||  | ||| |||||  ||| |||||| |||| |  ||  ||||||||||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttgattaagttgtttatcca 31341079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 457
Target Start/End: Original strand, 35808991 - 35809041
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaactt 457  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||| ||||    
T  35808991 tttgactatattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 446
Target Start/End: Original strand, 39591543 - 39591593
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttata 446  Q
    ||||||| |||||||||||||| |||| |||||||||||||||| ||||||    
T  39591543 tatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 503
Target Start/End: Original strand, 40371713 - 40371779
Alignment:
Q  437 atagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    |||||| ||||||| | |||||||||||| ||| |||||||||||   |||| ||||||||||||||    
T  40371713 atagctaatacatacacacttatatgattagcgcttatgctataagtctttaattaagttgtttatc 40371779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 464
Target Start/End: Complemental strand, 46213783 - 46213729
Alignment:
Q  411 gactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||| |||| |||||||||||||||||||| |||||||  |||||||||||    
T  46213783 gactttattttatattttgttatagaaatagcttttacataagcacttatatgat 46213729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 4591508 - 4591471
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatat 461  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  4591508 ttttgttatagagatagcttatacataaacacttatat 4591471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 42656499 - 42656454
Alignment:
Q  407 atttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||    
T  42656499 atttgactttattttatcttttgttatagaaatagcttatatataa 42656454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 47004070 - 47004013
Alignment:
Q  408 tttgactttatcttattt-ttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||| |||| | ||||||||||||||||||| | ||||| |||||||||||    
T  47004070 tttgactttattttatctattgttatagaaatagcttacatataaacacttatatgat 47004013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 451
Target Start/End: Complemental strand, 5276207 - 5276163
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||    
T  5276207 tttgactttatgttatcttttgttataaaaatagcttatacataa 5276163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 10079444 - 10079484
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||| ||||||||||||| |||||||| ||||    
T  10079444 ttttgttatagaagtagcttatacatacaaacttatttgat 10079484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 27121662 - 27121730
Alignment:
Q  397 tatgaaagcaatttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| |||||||||||||| ||||  ||| ||||||||||| |||||||||||  | |||||||||    
T  27121662 tatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataaggaattatatgat 27121730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 33894589 - 33894549
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||||||||||||  ||||| |||||    
T  33894589 ttttgttatagaaatagcttatacataagcacttacatgat 33894549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 43152986 - 43153030
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttataca 448  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||    
T  43152986 caatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 46223176 - 46223212
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttata 460  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  46223176 ttttgttatggaaatagcttatacataaacacttata 46223212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 481
Target Start/End: Original strand, 47528042 - 47528094
Alignment:
Q  429 ttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    |||||||||||||||||||||||| |||| ||| ||  | |||||||||||||    
T  47528042 ttatagaaatagcttatacataaacacttgtataataagtgtttatgctataa 47528094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 26516264 - 26516183
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||| ||||||||||||||||||||  |||||||||||  ||| ||||||||||| |  ||| ||||||||||||||||    
T  26516264 ttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatcca 26516183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 409 - 505
Target Start/End: Original strand, 20982223 - 20982320
Alignment:
Q  409 ttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||||||| ||||  |||||||||||||||||||||||||||  |||||||||||  ||  ||||||||||| |  ||| | ||||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatgaagttgtttatcca 20982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 6738492 - 6738580
Alignment:
Q  406 aatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaa 493  Q
    ||||||||||||| || | |||| |||| ||||||||||||||||||  |||||||||||  | |||||||||||||||| ||| ||||    
T  6738492 aatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtgtttatgctataaactcttaattaa 6738580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 462
Target Start/End: Original strand, 35135749 - 35135804
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatg 462  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||    
T  35135749 tttgactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 7096214 - 7096272
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgatt 465  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||  |||| |||||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgatt 7096272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 483
Target Start/End: Original strand, 13244590 - 13244644
Alignment:
Q  429 ttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaac 483  Q
    ||||||||||||||||||  ||| ||||||||||||  |||||||||||||||||    
T  13244590 ttatagaaatagcttataagtaagaacttatatgataagcgtttatgctataaac 13244644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 18704139 - 18704180
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgatt 465  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  18704139 ttttgttatagaaataacttatacataagaacttatatgatt 18704180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 34690868 - 34690764
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagt 495  Q
    |||||||| | | ||||||||| |||| |||||||||||||||||| |||||||||  ||||| ||||||  | |||||| ||||| |  ||| ||||||    
T  34690868 tatgaaagtattgtgactttattttatcttttgttatagaaatagcgtatacataaggacttaaatgattaacatttatggtataagcgcttagttaagt 34690769  T
Q  496 tgttt 500  Q
    |||||    
T  34690768 tgttt 34690764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 28586842 - 28586921
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatg 475  Q
    ||||||| || ||||||||||| |||| |||||||||||||||||  |||||||||  || |||||||| | ||||||||    
T  28586842 tatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataaccacatatatgatagtcgtttatg 28586921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 451
Target Start/End: Complemental strand, 39128625 - 39128578
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  39128625 caatttgactttattttatcttttgttatagaattagcttatacataa 39128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 4991047 - 4991109
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttt 486  Q
    |||||||||| |||||||||||||| ||| |||||||||||   || ||||||||||| ||||    
T  4991047 ttttgttataaaaatagcttatacacaaacacttatatgataatcgcttatgctataagcttt 4991109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 463
Target Start/End: Original strand, 9860903 - 9860941
Alignment:
Q  425 tttgttatagaaatagcttatacataaaaacttatatga 463  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  9860903 tttgttctagaaatagcttatacataataacttatatga 9860941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 21782653 - 21782707
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaactta 458  Q
    |||||||||||||| |||  ||||||||||||||||||||| ||||||| |||||    
T  21782653 caatttgactttattttagcttttgttatagaaatagcttaaacataaacactta 21782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 37063161 - 37063235
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||  | ||||||||   || ||||||||||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataa 37063235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 39257473 - 39257571
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||| |||  |||||||||||| ||||| |||||||||  ||||| |||||    ||||||||||||| |  ||| ||||||||||||||||    
T  39257473 tttgactttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaagttgtttatcca 39257571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 14714943 - 14715000
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||||||||||||||||||||  ||||||| ||   |||||||||| ||||    
T  14714943 ttttgttatagaaatagcttatacataatcacttatacgagaagcgtttatgccataa 14715000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 29588846 - 29588809
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatat 461  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  29588846 ttttgttatagaaatagcttatacataagcacttatat 29588809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 35960397 - 35960340
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||| |||| |||| |||||||||||| |||| |||||| |||||||||||    
T  35960397 tttgactttattttatcttttattatagaaatagtttatgcataaatacttatatgat 35960340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 451
Target Start/End: Original strand, 12407752 - 12407792
Alignment:
Q  412 actttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  12407752 actttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 13224395 - 13224355
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  13224395 ttttgttatagaaatagcttatacataagcacttctatgat 13224355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 35095867 - 35095927
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||| |||| ||||||||||||||||| ||| | ||||  |||||||||||    
T  35095867 caatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgat 35095927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 45999364 - 45999417
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  45999364 tatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacat 45999417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 408 - 480
Target Start/End: Complemental strand, 45107605 - 45107533
Alignment:
Q  408 tttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctata 480  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||| |  ||||||||||||    
T  45107605 tttgactttattttatttttcttatagaaatagcttatagataagcacttatatgatagatgtttatgctata 45107533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 23895319 - 23895262
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  23895319 tttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgat 23895262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 451
Target Start/End: Complemental strand, 50319288 - 50319231
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  50319288 cttatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 505
Target Start/End: Original strand, 12519047 - 12519155
Alignment:
Q  398 atgaaagcaatttgactttatcttattt-ttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagtt 496  Q
    |||||| |||||||||||||| ||||   ||||||||||| ||| |||||||||    ||||||| || || |||||||||||||||  ||| |||||||    
T  12519047 atgaaaacaatttgactttattttatacattgttatagaagtagattatacataggtgcttatataataggtgtttatgctataaacacttagttaagtt 12519146  T
Q  497 gtttatcca 505  Q
    |||||||||    
T  12519147 gtttatcca 12519155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 44032075 - 44032143
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| |||||||||||||| |||  ||||||||||||||  ||||||||||||| |||||||||||    
T  44032075 tatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgat 44032143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 26293180 - 26293231
Alignment:
Q  395 cttatgaaagcaatttgactttatctta-tttttgttatagaaatagcttat 445  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  26293180 cttatgaaaacaatttgactttattttactttttgttatagaaatagcttat 26293231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 504
Target Start/End: Complemental strand, 52013858 - 52013783
Alignment:
Q  429 ttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcc 504  Q
    |||||||||||||||||||||||  | ||| |||||  |  |||||||||||||| |||| |||||||||||||||    
T  52013858 ttatagaaatagcttatacataagcatttacatgataagtatttatgctataaacgtttaattaagttgtttatcc 52013783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 36151584 - 36151637
Alignment:
Q  400 gaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaa 452  Q
    |||| |||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  36151584 gaaaacaatttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 451
Target Start/End: Complemental strand, 2462946 - 2462906
Alignment:
Q  412 actttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2462946 actttatcttatattttgttatagaaatagcttatacataa 2462906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 13037844 - 13037791
Alignment:
Q  406 aatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    ||||||||||||||||    ||||||||||||||||||||||||||  ||||||||||    
T  13037844 aatttgactttatctt----ttgttatagaaatagcttatacataagcacttatatga 13037791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 49517063 - 49516995
Alignment:
Q  398 atgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaa-aacttatatgat 464  Q
    |||||| |||||||||||||| |||| |||||||||||||||| |||||||| ||| || |||||||||    
T  49517063 atgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgat 49516995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 503
Target Start/End: Complemental strand, 601055 - 600951
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagtt 496  Q
    ||||||| ||| |||||||||| ||||||||||||||||||| |  | || ||     |||| ||||| || ||||||||||||| |||||| |||||||    
T  601055 tatgaaaacaacttgactttattttatttttgttatagaaattgtctttagat--gtgcttacatgataggtgtttatgctataatcttttaattaagtt 600958  T
Q  497 gtttatc 503  Q
    |||||||    
T  600957 gtttatc 600951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 17269244 - 17269177
Alignment:
Q  397 tatgaaagcaatttgactttatctt-atttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    ||||||| |||||||||||||| || | ||||||| |||||||| |||||||||||  ||||||||||    
T  17269244 tatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 49125801 - 49125742
Alignment:
Q  423 tttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaa 482  Q
    |||||||| |||||||| ||||| ||||| ||||||||||||  ||||||||||| ||||    
T  49125801 tttttgttgtagaaataacttattcataagaacttatatgataagcgtttatgctgtaaa 49125742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 7200929 - 7201027
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||| |||| |||| |||| |||||||||||||  |||| ||||| |||||  ||| ||| | ||||| | |||| ||||||||||||||||    
T  7200929 tttgactttattttatcttttattatggaaatagcttataagtaaacacttacatgataagcgattaagttataatcatttaattaagttgtttatcca 7201027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 444
Target Start/End: Original strand, 14737779 - 14737829
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagctta 444  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| ||||    
T  14737779 cttatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 465
Target Start/End: Original strand, 24857621 - 24857659
Alignment:
Q  427 tgttatagaaatagcttatacataaaaacttatatgatt 465  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  24857621 tgttatagaaatagtttatacataaacacttatatgatt 24857659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 479
Target Start/End: Complemental strand, 26679239 - 26679185
Alignment:
Q  425 tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctat 479  Q
    ||||||||||||||| |||| ||||||| |||||||| ||  |||||||||||||    
T  26679239 tttgttatagaaataacttacacataaacacttatatcataagcgtttatgctat 26679185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 38651483 - 38651553
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| ||||| |||||||  |||| ||||||||||||| ||||||||||||||  ||||| |||||    
T  38651483 cttatgaaaacaattcgactttagtttatcttttgttatagaattagcttatacataagcacttacatgat 38651553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 44936677 - 44936775
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |||  | || | ||||  ||| |||| |||||| | |||| ||||||||||||||||    
T  44936677 tttgactttatcttatcttttgttatagaaataacttctacttaagtaattttttgatgagcgcttatactataagcatttaattaagttgtttatcca 44936775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 46499938 - 46499996
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatg 462  Q
    |||||||||||||| |||| |||| |||||||||||||||||| ||||  |||||||||    
T  46499938 caatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 6933037 - 6933090
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    ||||||| |||||||||||||| |||| |||||||||| |||| ||||||||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacat 6933090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 451
Target Start/End: Complemental strand, 6976944 - 6976887
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    |||||||||  | ||| |||||||||||| |||||||||||||||| |||||||||||    
T  6976944 cttatgaaaatagtttaactttatcttatcttttgttatagaaatatcttatacataa 6976887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 15360888 - 15360827
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaactt 457  Q
    ||||||| || ||||||||||| |||| |||||||||||||||| || ||||||||| ||||    
T  15360888 tatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 35350587 - 35350506
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    |||| |||||||  | |||| ||| ||||||||||||    
T  35350587 ttttgttatagaaatagcttataaataagaacttgtatgataaatgtttgtgctatatgcgtttaattatgttgtttatcca 35350506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 38758559 - 38758632
Alignment:
Q  432 tagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||| |||||||||||||| |||||| ||||  ||| ||||| ||||  || ||| ||||||||||||||||    
T  38758559 tagaaacagcttatacataaacacttatgtgatgagcgcttatgttataggctattaattaagttgtttatcca 38758632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 40357963 - 40358016
Alignment:
Q  398 atgaaagcaatttgactttatcttattt-ttgttatagaaatagcttatacata 450  Q
    |||||| |||||||||||||| ||||   |||||||||||||||||||||||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacata 40358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 48748657 - 48748726
Alignment:
Q  395 cttatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| |||||| ||||||| | || |||  ||||||||||||||||||||||  || ||||||||    
T  48748657 cttatgaaaacaatttaactttatttcatcttttgtatagaaatagcttatacataagcacatatatgat 48748726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 451
Target Start/End: Original strand, 172668 - 172708
Alignment:
Q  412 actttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  172668 actttatgttatcttttgttatagaaatagcttatacataa 172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 30259567 - 30259631
Alignment:
Q  401 aaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| | |||||  |||| ||||||    
T  30259567 aaagcagtttgactttattttatattttgttatagaaatagcttgtgcataagcacttctatgat 30259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 33339524 - 33339564
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||| ||||||||||||||||||||||| || ||||||||    
T  33339524 ttttggtatagaaatagcttatacataaacacctatatgat 33339564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 43208239 - 43208315
Alignment:
Q  426 ttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttat 502  Q
    ||||||||||||||||||||||||||| |||||||||||   ||||||| |||||| |  ||| |||||||||||||    
T  43208239 ttgttatagaaatagcttatacataaatacttatatgatgaacgtttatactataagcacttaattaagttgtttat 43208315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 505
Target Start/End: Complemental strand, 4558792 - 4558683
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagt 495  Q
    |||||||  ||||| ||||||| |||| |||| |||||||||||||||||||||||| ||||| || ||   |||||||||||||| |   || ||||||    
T  4558792 tatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaagt 4558693  T
Q  496 tgtttatcca 505  Q
    ||||||||||    
T  4558692 tgtttatcca 4558683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 14482188 - 14482128
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||||||  |||||||||||    
T  14482188 caatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgat 14482128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 42597394 - 42597331
Alignment:
Q  398 atgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttata 460  Q
    |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 8536125 - 8536191
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatga 463  Q
    ||||||| ||||||||||| |  ||  ||||||||||||||||||||||||||||  ||||||||||    
T  8536125 tatgaaaacaatttgacttcacttttattttgttatagaaatagcttatacataagcacttatatga 8536191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 1470932 - 1470985
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    |||||||| ||||||||||||| |||| |||| |||||||||||||||||||||    
T  1470932 tatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 2107438 - 2107511
Alignment:
Q  432 tagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    |||||||| ||||||||||| ||||||||||||  |||  || |||||||||  ||| ||||||||||||||||    
T  2107438 tagaaataacttatacataagaacttatatgataagcgcataagctataaacgcttaattaagttgtttatcca 2107511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 5226568 - 5226487
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||| ||||| | ||||||||||| |||||||||||    |||||||||||||||  ||  ||||||||||||||||    
T  5226568 ttttgttattgaaattgtttatacataaacacttatatgataaatgtttatgctataaacagttgattaagttgtttatcca 5226487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 503
Target Start/End: Complemental strand, 34563233 - 34563137
Alignment:
Q  408 tttgactttatcttatt-tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 503  Q
    ||||||||||| ||||  ||||| ||||||||| |||||| ||||  |||||||||||    ||||||||||||| | |||| ||||||||||||||    
T  34563233 tttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcgtttaattaagttgtttatc 34563137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 31915345 - 31915400
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||| ||||||||||||||  ||| |||||||||||| |||||||||||||||    
T  31915345 tatgaaaacaatttgactttattctatcttttgttatagatatagcttatacataa 31915400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 482
Target Start/End: Original strand, 39392748 - 39392823
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaa 482  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||   |||||||||||  ||  ||||||||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataaa 39392823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 13561388 - 13561442
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacata 450  Q
    ||||||| |||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  13561388 tatgaaaacaatttgactttatttaattttctgttatagaaatagcttattcata 13561442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 14949884 - 14949814
Alignment:
Q  395 cttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||  | ||||||| ||| |||| ||||||||||||| |||||||||||||| ||||| ||||||    
T  14949884 cttatgaaaagagtttgactctattttatcttttgttatagaagtagcttatacataagaacttgtatgat 14949814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 480
Target Start/End: Original strand, 26716523 - 26716596
Alignment:
Q  406 aatttgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctata 480  Q
    ||||||||||||| ||| | ||||||||||| ||||||||||||||  |||||||| ||  | ||||||||||||    
T  26716523 aatttgactttat-ttaatcttgttatagaagtagcttatacataagcacttatataataagtgtttatgctata 26716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 35869820 - 35869746
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||| ||||| |||| ||||||| ||||||| |||||||||||| ||||||||||||  | | |||||||||||    
T  35869820 tttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataa 35869746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 505
Target Start/End: Complemental strand, 7026725 - 7026616
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagt 495  Q
    ||||||| |||||| ||||||| |||| ||||||||||  | |||||||| |||||  |||||||||||    ||||||||| ||||   ||| ||||||    
T  7026725 tatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataaatgtttatgctgtaaatgcttaattaagt 7026626  T
Q  496 tgtttatcca 505  Q
    ||||||||||    
T  7026625 tgtttatcca 7026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 33697041 - 33697087
Alignment:
Q  405 caatttgactttatcttatttttgttatagaaatagcttatacataaaaac 455  Q
    |||||||||||||||||    ||||||||||||||||||||| ||||||||    
T  33697041 caatttgactttatctt----ttgttatagaaatagcttatatataaaaac 33697087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 40357894 - 40357825
Alignment:
Q  396 ttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||  ||||| ||||||| |||| ||||||||||  || |||||||||||||| |||||||||||    
T  40357894 ttatgaaaataattttactttattttatcttttgttatatcaagagcttatacataaatacttatatgat 40357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 464
Target Start/End: Original strand, 40728505 - 40728562
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||| |||| |||||||||||||||| ||||| ||| || |||||||||||    
T  40728505 tttgactttattttatcttttgttatagaaataacttatgcatgaacacttatatgat 40728562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 8629075 - 8629035
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||||||| ||||  |||||||||||    
T  8629075 ttttgttatagaaatagcttataaataagcacttatatgat 8629035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 451
Target Start/End: Complemental strand, 26215475 - 26215435
Alignment:
Q  412 actttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  26215475 actttattttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 451
Target Start/End: Complemental strand, 37220283 - 37220255
Alignment:
Q  423 tttttgttatagaaatagcttatacataa 451  Q
    |||||||||||||||||||||||||||||    
T  37220283 tttttgttatagaaatagcttatacataa 37220255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 18397861 - 18397674
Alignment:
Q  77 caattgcagcaccaagggcattgtttggctgaattggtgtgtggaagataatgatcgaagagacaataaccgagattctcttcatcgtgttccctatgct 176  Q
    ||||||| || ||||| ||||||   |||||||||||||| |||||||| || || ||||| || || || || || |  ||||| ||||| || |||||    
T  18397861 caattgcggctccaagagcattgacaggctgaattggtgtatggaagatgataattgaagatactatgacagatatacgtttcatggtgtttccaatgct 18397762  T
Q  177 aaatgttaatggagaaatctgatccagagacatataagagacttgattgtacaagtgatagaacacactctgtgcggctacccacctg 264  Q
    ||||||||  ||||| |||| |||||  ||||| ||||| || |||||||| |  |||||||| | |||||| || ||||||||||||    
T  18397761 aaatgttaggggagagatctcatccaacgacatgtaagacacctgattgtatagatgatagaatatactctgagctgctacccacctg 18397674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 477
Target Start/End: Complemental strand, 38462275 - 38462194
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgct 477  Q
    ||||||| || ||||||||||| |||| ||||| ||||||||||||||||| ||||| |||||||||||  | |||||||||    
T  38462275 tatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataagtgtttatgct 38462194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 43116532 - 43116613
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||||||||||| ||||||| |||| ||||||   | ||||||||||||||  | | ||||||||||||||||    
T  43116532 ttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataaacactaaattaagttgtttatcca 43116613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 13804753 - 13804697
Alignment:
Q  425 tttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    |||||||||||||||| ||||||||||| ||||| |||||  |||||||||||||||    
T  13804753 tttgttatagaaatagtttatacataaacacttaaatgatcagcgtttatgctataa 13804697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 36445698 - 36445658
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  36445698 ttttgttatagaaatagcttatacataaaaactcatatgat 36445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 44374720 - 44374788
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||  |||||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgat 44374788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 1395665 - 1395611
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacata 450  Q
    |||||||  ||||||||||||| |||| |||||||||||||||||||||||||||    
T  1395665 tatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 44284132 - 44284202
Alignment:
Q  395 cttatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||| || ||||||||| | ||||||| ||||||||||||||||||||||| |  |||||||||||    
T  44284132 cttatgaaaacagtttgactttgttttattttttgttatagaaatagcttatacattagtacttatatgat 44284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 41028955 - 41029012
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||||||||||||||||||||  |||||||||||  || |||| |||||||    
T  41028955 ttttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataa 41029012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 2128335 - 2128383
Alignment:
Q  405 caatttgactttatcttat-ttttgttatagaaatagcttatacataaa 452  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  2128335 caatttaactttattttatcttttgttatagaaatagcttatacataaa 2128383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 32703132 - 32703064
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| |||||||| ||||| |||| |||| | |||||||||||||||||||||| | |||||||||    
T  32703132 tatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgat 32703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 40122827 - 40122883
Alignment:
Q  396 ttatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    |||||||| || ||||||||||| |||| ||||||||| ||||||||||||||||||    
T  40122827 ttatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 501
Target Start/End: Complemental strand, 29094333 - 29094270
Alignment:
Q  438 tagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgttta 501  Q
    ||||||||||||||| |||||||||||  | ||||||||||||| | |||| ||||| ||||||    
T  29094333 tagcttatacataaacacttatatgataagtgtttatgctataagcgtttaattaagctgttta 29094270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Complemental strand, 48528555 - 48528504
Alignment:
Q  414 tttatcttattt-ttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||| |||||| ||||||||||||||||||||||||||  |||||||||||    
T  48528555 tttattttatttcttgttatagaaatagcttatacataagtacttatatgat 48528504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 2865735 - 2865789
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttttgttatagaaatagcttatacataa 451  Q
    ||||||| |||||||||||| | |||  |||||||||||||||||||||| ||||    
T  2865735 tatgaaaacaatttgactttgttttaactttgttatagaaatagcttatatataa 2865789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 16790430 - 16790500
Alignment:
Q  395 cttatgaaagcaatttgactttatcttattt-ttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||  ||||||| ||||| |||| | |||||||| |||||||||||||||||  |||||||||||    
T  16790430 cttatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgat 16790500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 451
Target Start/End: Complemental strand, 20669593 - 20669563
Alignment:
Q  421 tatttttgttatagaaatagcttatacataa 451  Q
    |||||||||||||||||||||||||||||||    
T  20669593 tatttttgttatagaaatagcttatacataa 20669563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 34318073 - 34318031
Alignment:
Q  406 aatttgactttatcttat-ttttgttatagaaatagcttatac 447  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  34318073 aatttgactttattttatattttgttatagaaatagcttatac 34318031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 48364956 - 48365010
Alignment:
Q  398 atgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    |||||| |||||||||||||| |||| ||||||||| |||||| |||||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 446
Target Start/End: Original strand, 49586992 - 49587042
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttata 446  Q
    ||||||| || ||||||||||| |||| |||||||||||||||||||||||    
T  49586992 tatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 15304423 - 15304472
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttat 445  Q
    ||||||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  15304423 tatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 483
Target Start/End: Original strand, 40321125 - 40321198
Alignment:
Q  410 tgactttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaac 483  Q
    |||||||||  |||||||||||| ||||||||||| ||| ||  ||||||||||||  | ||||| ||||||||    
T  40321125 tgactttattatatttttgttattgaaatagcttagacacaagcacttatatgattaacatttatactataaac 40321198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 42809295 - 42809242
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    ||||||| |||||| ||| ||| |||| ||||||||||||||||||||||||||    
T  42809295 tatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 47584457 - 47584400
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||||||| |||  |||||| |||||||||||||| |||||||| ||||||||||    
T  47584457 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgat 47584400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 49772747 - 49772812
Alignment:
Q  400 gaaagcaatttgactttatcttatttttg-ttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||| ||||| |||||||| ||||||||  ||| | |||||||||||||||||| |||||||||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttatatgat 49772812  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 905058 - 905114
Alignment:
Q  409 ttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||| |||| |||||||||||||||||||||||| |||   ||||||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgat 905114  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 3182438 - 3182506
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| |||||||||||||| |||| ||||  ||||||| || |||||||||||| ||||| |||||    
T  3182438 tatgaaaacaatttgactttattttatctttttctatagaagtaacttatacataaacacttaaatgat 3182506  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 18396083 - 18396011
Alignment:
Q  10 ccacttttgattatgtgtgtaaatgaaactgcaactttggacatactcacagtagccgcaacatgcccaattg 82  Q
    ||||| ||||| || |||||||| || || || |||||||||||||| || |||||||| ||||| |||||||    
T  18396083 ccactcttgatgatatgtgtaaacgacacagccactttggacatactaaccgtagccgcgacatgtccaattg 18396011  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 20143860 - 20143824
Alignment:
Q  469 gtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  20143860 gtttatgctataaacctttagttaagttgtttatcca 20143824  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 451
Target Start/End: Original strand, 20192693 - 20192737
Alignment:
Q  408 tttgactttatcttat-ttttgttatagaaatagcttatacataa 451  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||    
T  20192693 tttgactttattttatcttttgttatataaatagcttatacataa 20192737  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 505
Target Start/End: Original strand, 23269329 - 23269365
Alignment:
Q  469 gtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  23269329 gtttatgctataaacctttagttaagttgtttatcca 23269365  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 25964408 - 25964368
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||||| |||||||||||||| || ||||||||||||    
T  25964408 ttttgttataaaaatagcttatacaaaagaacttatatgat 25964368  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 33307656 - 33307724
Alignment:
Q  397 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 464  Q
    |||||||  ||||||||||||| | || ||||||||  ||||||||||||||||||  |||||||||||    
T  33307656 tatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgat 33307724  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 452
Target Start/End: Complemental strand, 44488850 - 44488822
Alignment:
Q  424 ttttgttatagaaatagcttatacataaa 452  Q
    |||||||||||||||||||||||||||||    
T  44488850 ttttgttatagaaatagcttatacataaa 44488822  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 51278234 - 51278286
Alignment:
Q  398 atgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacat 449  Q
    |||||| || ||||||||||| | || ||||||||||||||||||||||||||    
T  51278234 atgaaaacagtttgactttatttaatattttgttatagaaatagcttatacat 51278286  T

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Target: scaffold0091 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 5985 - 5904
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||| ||||| | ||||||||||| |||||||||||    |||||||||||||||  ||  ||||||||||||||||    
T  5985 ttttgttattgaaattgtttatacataaacacttatatgataaatgtttatgctataaacagttgattaagttgtttatcca 5904  T

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Target: scaffold0654 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 6713 - 6781
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| ||||||||||| |  ||||||| |||||||||||||| ||||||||||  |||||||||||    
T  6713 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgat 6781  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 116632 - 116700
Alignment:
Q  397 tatgaaagcaatttgactttatcttatttt-tgttatagaaatagcttatacataaaaacttatatgat 464  Q
    ||||||| ||||||||||| |  ||||||| |||||||||||||| ||||||||||  |||||||||||    
T  116632 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgat 116700  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 505
Target Start/End: Original strand, 34023 - 34097
Alignment:
Q  431 atagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatcca 505  Q
    ||||||||||||| |||||||  |||||||||||  |   ||||||||||| || ||| ||||||||||||||||    
T  34023 atagaaatagcttctacataatcacttatatgatcagatcttatgctataagctcttaattaagttgtttatcca 34097  T

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Target: scaffold0455 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 8616 - 8673
Alignment:
Q  424 ttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataa 481  Q
    ||||||||||||||||||||| ||| ||  ||||||||||| | || |||||||||||    
T  8616 ttttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataa 8673  T

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