View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0200_1D_high_11 (Length: 303)

Name: NF0200_1D_high_11
Description: NF0200_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0200_1D_high_11
NF0200_1D_high_11
[»] chr3 (27 HSPs)
chr3 (16-162)||(34897794-34897940)
chr3 (140-265)||(1995448-1995573)
chr3 (151-225)||(52859272-52859346)
chr3 (157-265)||(19830394-19830502)
chr3 (157-265)||(27033655-27033763)
chr3 (157-265)||(43719910-43720018)
chr3 (155-265)||(10474400-10474509)
chr3 (196-265)||(2229987-2230056)
chr3 (157-265)||(29586340-29586447)
chr3 (158-261)||(44637950-44638052)
chr3 (191-265)||(54911658-54911732)
chr3 (192-265)||(33632827-33632899)
chr3 (196-265)||(34373835-34373904)
chr3 (157-253)||(24754673-24754769)
chr3 (157-253)||(24763670-24763766)
chr3 (150-265)||(48084823-48084939)
chr3 (202-265)||(34373593-34373656)
chr3 (192-265)||(31523666-31523739)
chr3 (157-265)||(51982549-51982656)
chr3 (155-224)||(30235416-30235484)
chr3 (157-262)||(40851781-40851886)
chr3 (192-265)||(42613084-42613157)
chr3 (196-265)||(46167397-46167466)
chr3 (192-265)||(49679268-49679341)
chr3 (200-264)||(25285843-25285907)
chr3 (162-250)||(47750274-47750361)
chr3 (192-253)||(550814-550875)
[»] chr6 (22 HSPs)
chr6 (149-265)||(7215807-7215923)
chr6 (149-265)||(2800566-2800682)
chr6 (148-265)||(4804452-4804569)
chr6 (157-265)||(7162088-7162196)
chr6 (157-265)||(21159332-21159440)
chr6 (199-265)||(27826542-27826608)
chr6 (157-265)||(17828532-17828639)
chr6 (157-265)||(17944166-17944274)
chr6 (196-265)||(12412641-12412710)
chr6 (196-265)||(13089751-13089820)
chr6 (159-253)||(23936269-23936365)
chr6 (192-265)||(24484883-24484956)
chr6 (157-265)||(227526-227635)
chr6 (194-265)||(32254031-32254102)
chr6 (196-265)||(1249150-1249217)
chr6 (150-192)||(9952993-9953035)
chr6 (192-265)||(13888520-13888594)
chr6 (192-265)||(2142291-2142364)
chr6 (216-265)||(29698167-29698216)
chr6 (192-261)||(7545645-7545715)
chr6 (200-238)||(9954332-9954370)
chr6 (158-214)||(29229149-29229204)
[»] chr1 (26 HSPs)
chr1 (149-265)||(39426214-39426330)
chr1 (148-265)||(32887735-32887851)
chr1 (153-265)||(26860010-26860121)
chr1 (151-237)||(35534741-35534825)
chr1 (157-265)||(26372256-26372362)
chr1 (157-265)||(50294026-50294134)
chr1 (192-265)||(5047379-5047452)
chr1 (196-265)||(12151771-12151840)
chr1 (157-265)||(32618805-32618911)
chr1 (196-253)||(7840681-7840738)
chr1 (150-265)||(18976260-18976376)
chr1 (157-265)||(50484390-50484498)
chr1 (191-261)||(24977248-24977318)
chr1 (192-265)||(30077642-30077715)
chr1 (146-265)||(5854799-5854917)
chr1 (203-265)||(24413291-24413353)
chr1 (196-265)||(48327156-48327224)
chr1 (192-265)||(52280037-52280110)
chr1 (158-212)||(49384627-49384680)
chr1 (208-265)||(12380924-12380981)
chr1 (208-265)||(12384991-12385048)
chr1 (150-214)||(1228496-1228560)
chr1 (148-224)||(12380831-12380907)
chr1 (148-224)||(12384898-12384974)
chr1 (149-249)||(27982072-27982171)
chr1 (157-233)||(45978041-45978117)
[»] chr2 (28 HSPs)
chr2 (151-264)||(30709115-30709228)
chr2 (150-265)||(4446852-4446967)
chr2 (148-265)||(19908784-19908899)
chr2 (150-225)||(30217517-30217592)
chr2 (149-265)||(31618724-31618838)
chr2 (157-265)||(13238685-13238793)
chr2 (157-265)||(35316829-35316937)
chr2 (174-265)||(15709772-15709862)
chr2 (200-265)||(28564896-28564961)
chr2 (153-265)||(30857638-30857749)
chr2 (149-219)||(30721564-30721632)
chr2 (174-265)||(36929720-36929810)
chr2 (150-263)||(2063359-2063472)
chr2 (192-265)||(8988859-8988932)
chr2 (191-264)||(34512022-34512095)
chr2 (192-265)||(35315286-35315359)
chr2 (192-265)||(38397085-38397158)
chr2 (193-265)||(21454494-21454565)
chr2 (192-265)||(374997-375070)
chr2 (196-265)||(23259489-23259558)
chr2 (174-264)||(15722239-15722328)
chr2 (157-223)||(22061433-22061498)
chr2 (192-261)||(19905889-19905958)
chr2 (192-265)||(23459844-23459917)
chr2 (150-250)||(35315521-35315620)
chr2 (199-265)||(4603114-4603180)
chr2 (151-200)||(6946335-6946384)
chr2 (157-265)||(36758825-36758932)
[»] chr8 (24 HSPs)
chr8 (151-265)||(42761717-42761831)
chr8 (148-265)||(21360280-21360400)
chr8 (196-265)||(30426671-30426740)
chr8 (157-265)||(28069723-28069831)
chr8 (157-265)||(36991360-36991468)
chr8 (174-265)||(18689495-18689585)
chr8 (174-265)||(24557162-24557252)
chr8 (192-265)||(26749546-26749619)
chr8 (155-265)||(42338008-42338117)
chr8 (157-265)||(6014198-6014307)
chr8 (194-265)||(36748492-36748562)
chr8 (201-265)||(10672519-10672583)
chr8 (192-248)||(17520403-17520459)
chr8 (148-265)||(10652571-10652688)
chr8 (196-261)||(40695249-40695314)
chr8 (193-265)||(34612568-34612640)
chr8 (150-265)||(45113274-45113390)
chr8 (147-238)||(37966397-37966487)
chr8 (146-212)||(20169125-20169190)
chr8 (200-265)||(24102020-24102085)
chr8 (216-265)||(28318924-28318973)
chr8 (196-265)||(41511266-41511335)
chr8 (216-265)||(44859189-44859238)
chr8 (192-264)||(3763520-3763592)
[»] chr5 (28 HSPs)
chr5 (157-265)||(29340999-29341106)
chr5 (157-265)||(35660572-35660680)
chr5 (158-265)||(4895699-4895806)
chr5 (157-265)||(11775797-11775905)
chr5 (157-265)||(18625384-18625492)
chr5 (157-265)||(32129580-32129688)
chr5 (157-265)||(37266735-37266843)
chr5 (157-264)||(43309113-43309220)
chr5 (196-265)||(14349807-14349876)
chr5 (192-265)||(31653039-31653112)
chr5 (196-265)||(40753164-40753233)
chr5 (157-265)||(13032122-13032230)
chr5 (174-265)||(34827196-34827287)
chr5 (159-265)||(39902419-39902525)
chr5 (192-265)||(10362012-10362085)
chr5 (192-265)||(36290606-36290679)
chr5 (193-265)||(2984389-2984461)
chr5 (155-221)||(9460597-9460662)
chr5 (192-262)||(27428879-27428949)
chr5 (192-265)||(3057152-3057225)
chr5 (200-261)||(14688582-14688643)
chr5 (192-245)||(18653385-18653438)
chr5 (193-265)||(31279918-31279990)
chr5 (202-265)||(43222130-43222193)
chr5 (211-265)||(4592804-4592858)
chr5 (150-184)||(21213953-21213987)
chr5 (192-265)||(31546490-31546563)
chr5 (192-265)||(41660110-41660183)
[»] chr7 (33 HSPs)
chr7 (157-265)||(4888471-4888579)
chr7 (150-239)||(47270580-47270668)
chr7 (196-265)||(25084730-25084799)
chr7 (152-265)||(40023215-40023327)
chr7 (157-265)||(9559017-9559125)
chr7 (150-265)||(39855770-39855884)
chr7 (196-265)||(12139330-12139400)
chr7 (192-265)||(32915960-32916033)
chr7 (149-265)||(33450510-33450627)
chr7 (192-265)||(47799898-47799971)
chr7 (157-265)||(7712331-7712438)
chr7 (188-244)||(29844316-29844372)
chr7 (158-265)||(989133-989239)
chr7 (150-264)||(7373872-7373985)
chr7 (161-265)||(7362572-7362676)
chr7 (157-265)||(16366522-16366630)
chr7 (157-265)||(21151156-21151264)
chr7 (148-265)||(47500236-47500354)
chr7 (192-265)||(8149613-8149686)
chr7 (196-265)||(45260429-45260498)
chr7 (158-265)||(29631052-29631156)
chr7 (157-249)||(44647984-44648076)
chr7 (194-265)||(24193597-24193668)
chr7 (148-265)||(18198260-18198377)
chr7 (192-265)||(30588539-30588612)
chr7 (157-225)||(5463867-5463934)
chr7 (191-261)||(19027680-19027751)
chr7 (191-261)||(20726885-20726956)
chr7 (162-265)||(38365659-38365761)
chr7 (194-253)||(46802331-46802390)
chr7 (146-212)||(44390835-44390900)
chr7 (179-236)||(18064588-18064643)
chr7 (157-265)||(47226039-47226145)
[»] chr4 (37 HSPs)
chr4 (157-265)||(19901881-19901989)
chr4 (157-262)||(23610649-23610754)
chr4 (157-265)||(5416429-5416536)
chr4 (152-253)||(36532641-36532741)
chr4 (148-265)||(56558283-56558400)
chr4 (153-265)||(1871281-1871392)
chr4 (150-265)||(56453777-56453891)
chr4 (149-220)||(15178628-15178699)
chr4 (191-265)||(5763159-5763233)
chr4 (192-265)||(56269074-56269147)
chr4 (157-265)||(3952133-3952241)
chr4 (157-265)||(34778425-34778533)
chr4 (158-244)||(5815267-5815350)
chr4 (154-265)||(42844148-42844258)
chr4 (192-265)||(23474115-23474188)
chr4 (196-265)||(24073620-24073689)
chr4 (192-265)||(48914516-48914589)
chr4 (157-265)||(18207003-18207111)
chr4 (192-265)||(5524451-5524524)
chr4 (155-265)||(13493276-13493387)
chr4 (200-265)||(30567905-30567970)
chr4 (155-220)||(33841766-33841830)
chr4 (192-265)||(36688186-36688259)
chr4 (152-252)||(47922324-47922425)
chr4 (192-265)||(50483554-50483627)
chr4 (157-265)||(33247093-33247201)
chr4 (157-265)||(39862521-39862629)
chr4 (199-265)||(33262557-33262623)
chr4 (192-265)||(1015852-1015925)
chr4 (157-265)||(12312438-12312547)
chr4 (229-265)||(46804635-46804671)
chr4 (227-265)||(12241441-12241479)
chr4 (199-265)||(38079725-38079791)
chr4 (191-228)||(5817976-5818013)
chr4 (163-248)||(36003216-36003300)
chr4 (192-265)||(37002249-37002322)
chr4 (192-265)||(42010121-42010194)
[»] scaffold0062 (2 HSPs)
scaffold0062 (174-265)||(58684-58774)
scaffold0062 (174-264)||(70796-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (196-265)||(7151-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (192-265)||(29567-29640)
[»] scaffold0012 (1 HSPs)
scaffold0012 (157-265)||(208067-208175)
[»] scaffold0035 (1 HSPs)
scaffold0035 (196-265)||(16399-16468)
[»] scaffold0008 (1 HSPs)
scaffold0008 (196-265)||(9203-9272)
[»] scaffold0171 (1 HSPs)
scaffold0171 (199-265)||(17311-17377)
[»] scaffold0126 (1 HSPs)
scaffold0126 (202-265)||(22450-22513)


Alignment Details
Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 34897794 - 34897940
Alignment:
Q  16 tggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttgga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34897794 tggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcgga 34897893  T
Q  116 atccaagtcaacatgtaatagaggtgggtgagaggggttaggatcct 162  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34897894 atccaagtcaacatgtaattgaggtgggtgagaggggttaggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 1995573 - 1995448
Alignment:
Q  140 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 239  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  240 taagtgggtcccactatcattaatta 265  Q
    |||||| ||| ||| |||||||||||    
T  1995473 taagtgagtctcaccatcattaatta 1995448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 225  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 19830394 - 19830502
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  257 cattaatta 265  Q
    |||||||||    
T  19830494 cattaatta 19830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 27033763 - 27033655
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  257 cattaatta 265  Q
    |||||||||    
T  27033663 cattaatta 27033655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 43719910 - 43720018
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  257 cattaatta 265  Q
    |||||||||    
T  43720010 cattaatta 43720018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 10474400 - 10474509
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 254  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| || ||||     
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccacc 10474498  T
Q  255 atcattaatta 265  Q
    | |||||||||    
T  10474499 aacattaatta 10474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 2230056 - 2229987
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaatta 2229987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 29586447 - 29586340
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  257 cattaatta 265  Q
    |||||||||    
T  29586348 cattaatta 29586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 44638052 - 44637950
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  258 atta 261  Q
    ||||    
T  44637953 atta 44637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 54911732 - 54911658
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| |||||||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 33632899 - 33632827
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | |||| |||||||||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaaatggattccac-atcattaatta 33632827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 34373904 - 34373835
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaatta 34373835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 265
Target Start/End: Complemental strand, 48084939 - 48084823
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  249 cccactatcattaatta 265  Q
    ||||  |||||||||||    
T  48084839 cccatcatcattaatta 48084823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 34373593 - 34373656
Alignment:
Q  202 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 34373656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 31523666 - 31523739
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 31523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 51982549 - 51982656
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| ||||||||| || | |  ||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcat 51982647  T
Q  257 cattaatta 265  Q
    |||||||||    
T  51982648 cattaatta 51982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 224  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 40851886 - 40851781
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  257 cattaa 262  Q
    ||||||    
T  40851786 cattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 42613157 - 42613084
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 42613084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 46167466 - 46167397
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||| || || ||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaatta 46167397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 49679268 - 49679341
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 49679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 25285843 - 25285907
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| ||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaatt 25285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 47750274 - 47750361
Alignment:
Q  162 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 250  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcc 47750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 550814 - 550875
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| |||||||||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccac 550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 7215807 - 7215923
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  249 cccactatcattaatta 265  Q
    |||||||||||||||||    
T  7215907 cccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 2800566 - 2800682
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  249 cccactatcattaatta 265  Q
    ||||| |||||| ||||    
T  2800666 cccaccatcattgatta 2800682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 4804569 - 4804452
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  4804469 tcccaccatcattaatta 4804452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 7162196 - 7162088
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  257 cattaatta 265  Q
    |||||||||    
T  7162096 cattaatta 7162088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 21159332 - 21159440
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  257 cattaatta 265  Q
    |||||||||    
T  21159432 cattaatta 21159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 27826608 - 27826542
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 27826542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 17828532 - 17828639
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||  ||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcat 17828630  T
Q  257 cattaatta 265  Q
    || ||||||    
T  17828631 caataatta 17828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 17944274 - 17944166
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  257 cattaatta 265  Q
    |||||||||    
T  17944174 cattaatta 17944166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 12412710 - 12412641
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaatta 12412641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 13089751 - 13089820
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaatta 13089820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 23936365 - 23936269
Alignment:
Q  159 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | |||||||||||||||||||||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccac 23936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 24484956 - 24484883
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 24484883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 227526 - 227635
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 255  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||  |    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  256 tcattaatta 265  Q
    ||||| ||||    
T  227626 tcattgatta 227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 32254031 - 32254102
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaatta 32254102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 1249150 - 1249217
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 1249217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacac 192  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 13888520 - 13888594
Alignment:
Q  192 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  |||||||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaatta 13888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 2142291 - 2142364
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaatta 2142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 29698216 - 29698167
Alignment:
Q  216 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcattaatta 29698167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  192 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctacca 238  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 214  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 39426330 - 39426214
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  249 cccactatcattaatta 265  Q
    |||||||||||||||||    
T  39426230 cccactatcattaatta 39426214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 32887735 - 32887851
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  32887834 tcccaccatcattaatta 32887851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 265
Target Start/End: Original strand, 26860010 - 26860121
Alignment:
Q  153 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  253 ctatcattaatta 265  Q
    | |||||||||||    
T  26860109 caatcattaatta 26860121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 237  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 26372362 - 26372256
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |     
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccac 26372265  T
Q  257 cattaatta 265  Q
    |||||||||    
T  26372264 cattaatta 26372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 50294026 - 50294134
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  257 cattaatta 265  Q
    |||||||||    
T  50294126 cattaatta 50294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 5047379 - 5047452
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaatta 5047452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 12151840 - 12151771
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaatta 12151771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 32618911 - 32618805
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  257 cattaatta 265  Q
    |||||||||    
T  32618813 cattaatta 32618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 18976260 - 18976376
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  249 cccactatcattaatta 265  Q
    ||||  |||||||||||    
T  18976360 cccatcatcattaatta 18976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 50484498 - 50484390
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||  |    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgt 50484399  T
Q  257 cattaatta 265  Q
    |||||||||    
T  50484398 cattaatta 50484390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 24977318 - 24977248
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| |||||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcatta 24977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 30077642 - 30077715
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaatta 30077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 5854799 - 5854917
Alignment:
Q  146 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 245  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  246 ggtcccactatcattaatta 265  Q
    | |||||  |||||||||||    
T  5854898 gatcccatcatcattaatta 5854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 24413291 - 24413353
Alignment:
Q  203 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaatta 24413353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 48327156 - 48327224
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||| | |||||||||  || ||||||||| ||||||||| |||| |||||||||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaatta 48327224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 52280037 - 52280110
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 52280110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 212  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 12380924 - 12380981
Alignment:
Q  208 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12380981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 12384991 - 12385048
Alignment:
Q  208 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 214  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 224  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 224  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 27982171 - 27982072
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    ||||||| |||||||| |||||   |||||||||||||| |  ||||||||||||| ||||||| | |||||| ||  ||||||| | |||||| |||||    
T  27982171 ggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagatatagacataaaaaatatatgttgggtcccatcattaaatgggt 27982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 45978117 - 45978041
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcc 233  Q
    ||||||||  |||||||||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||    
T  45978117 gatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 30709228 - 30709115
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 250  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  251 cactatcattaatt 264  Q
    ||| ||||||||||    
T  30709128 caccatcattaatt 30709115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 4446852 - 4446967
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  250 ccactatcattaatta 265  Q
     |||||||||||||||    
T  4446952 tcactatcattaatta 4446967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 19908899 - 19908784
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  19908801 tcccaccatcattaatta 19908784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 225  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 31618724 - 31618838
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  249 cccactatcattaatta 265  Q
    ||||| |||||||||||    
T  31618822 cccacaatcattaatta 31618838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 13238793 - 13238685
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  257 cattaatta 265  Q
    |||||||||    
T  13238693 cattaatta 13238685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 35316937 - 35316829
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  257 cattaatta 265  Q
    |||||||||    
T  35316837 cattaatta 35316829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 15709862 - 15709772
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 28564961 - 28564896
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 28564896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 265
Target Start/End: Original strand, 30857638 - 30857749
Alignment:
Q  153 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  253 ctatcattaatta 265  Q
    | |||||||||||    
T  30857737 ccatcattaatta 30857749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 219  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 36929810 - 36929720
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || ||||||||||||| ||| | || | |||||||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaatta 36929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 2063472 - 2063359
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  249 cccactatcattaat 263  Q
     |||| |||||||||    
T  2063373 tccaccatcattaat 2063359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 8988932 - 8988859
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaatta 8988859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 34512022 - 34512095
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| ||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaatt 34512095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 35315286 - 35315359
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || ||||||| || ||||||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaatta 35315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 38397158 - 38397085
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| |||| ||||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataatta 38397085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 21454494 - 21454565
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcattaatta 21454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 375070 - 374997
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 374997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 23259489 - 23259558
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaatta 23259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 15722328 - 15722239
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 15722239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 223  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 23459844 - 23459917
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 23459917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 35315620 - 35315521
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 4603114 - 4603180
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||| | | |||| |||||| || |||||||||  |||||||||| |||||||||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaatta 4603180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 200  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 36758825 - 36758932
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||   |||||||||||||||   ||||||||||||||||||||||| ||| ||  |  ||| ||||| | ||| |||||| |||| ||    
T  36758825 gatcctctccatttataaaaataaatggaagttg-caatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccacaat 36758923  T
Q  257 cattaatta 265  Q
    |||||||||    
T  36758924 cattaatta 36758932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 42761831 - 42761717
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 250  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  251 cactatcattaatta 265  Q
    ||  |||||||||||    
T  42761731 catcatcattaatta 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 21360400 - 21360280
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 243  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  244 tgggtcccactatcattaatta 265  Q
    |||  ||||| || ||||||||    
T  21360301 tggaccccaccattattaatta 21360280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 30426671 - 30426740
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 30426740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 28069831 - 28069723
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  257 cattaatta 265  Q
    |||||||||    
T  28069731 cattaatta 28069723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 36991468 - 36991360
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  257 cattaatta 265  Q
    |||||||||    
T  36991368 cattaatta 36991360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 18689585 - 18689495
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 24557162 - 24557252
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  |||||||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 26749546 - 26749619
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 26749619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 42338008 - 42338117
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 254  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  255 atcattaatta 265  Q
    |||||||||||    
T  42338107 atcattaatta 42338117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 6014307 - 6014198
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 255  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  256 tcattaatta 265  Q
    ||||||||||    
T  6014207 tcattaatta 6014198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 36748492 - 36748562
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcattaatta 36748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 10672519 - 10672583
Alignment:
Q  201 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaatta 10672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 17520459 - 17520403
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| |||||||||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggt 17520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 10652571 - 10652688
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| |||||| ||||||||||||   |   ||| ||||||||||||||| ||| ||||| |||  |||||| ||| | ||| ||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattggg 10652670  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  10652671 tcccaccatcattaatta 10652688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 40695249 - 40695314
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| |||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcatta 40695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 34612640 - 34612568
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaatta 34612568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 265
Target Start/End: Complemental strand, 45113390 - 45113274
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| |||||| |||||||||| |   |   ||||||||||||| ||||||||| || |||||||  ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  249 cccactatcattaatta 265  Q
    ||||  |||||||||||    
T  45113290 cccatcatcattaatta 45113274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 37966397 - 37966487
Alignment:
Q  147 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacca 238  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | ||||||||||    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctacca 37966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  146 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 212  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 24102085 - 24102020
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| | |||||||||  ||| |||||||| |||||| || |||| |||||||||||    
T  24102085 agagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaatta 24102020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 28318924 - 28318973
Alignment:
Q  216 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||||||||    
T  28318924 aaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaatta 28318973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 41511335 - 41511266
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| ||||||||| | | |||||||||| ||||||||| || ||||||| | |||| |||||||||||    
T  41511335 ttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaatta 41511266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 44859189 - 44859238
Alignment:
Q  216 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||  ||||| |||||| |||||||||||||| |||||||||||    
T  44859189 aaaatagatggtgggttctaccactaagtgggtcccaccatcattaatta 44859238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 3763520 - 3763592
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    |||||||||||| | |||||| | |||| || |  |||||||||||||||||||||| ||||  |||||||||    
T  3763520 caatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaatt 3763592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 29341106 - 29340999
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  257 cattaatta 265  Q
    |||||||||    
T  29341007 cattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 35660572 - 35660680
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  257 cattaatta 265  Q
    |||||||||    
T  35660672 cattaatta 35660680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 4895699 - 4895806
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  258 attaatta 265  Q
    ||||||||    
T  4895799 attaatta 4895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 11775905 - 11775797
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||  |    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgt 11775806  T
Q  257 cattaatta 265  Q
    |||||||||    
T  11775805 cattaatta 11775797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 18625384 - 18625492
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  257 cattaatta 265  Q
    |||||||||    
T  18625484 cattaatta 18625492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 32129580 - 32129688
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  257 cattaatta 265  Q
    |||||||||    
T  32129680 cattaatta 32129688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 37266843 - 37266735
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  257 cattaatta 265  Q
    |||||||||    
T  37266743 cattaatta 37266735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 43309220 - 43309113
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  257 cattaatt 264  Q
    ||||||||    
T  43309120 cattaatt 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 14349876 - 14349807
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 14349807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 31653112 - 31653039
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| |||||||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 40753164 - 40753233
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaatta 40753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 13032230 - 13032122
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  257 cattaatta 265  Q
    |||||||||    
T  13032130 cattaatta 13032122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 34827287 - 34827196
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| |||||||||||||| ||| |||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaatta 34827196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 265
Target Start/End: Complemental strand, 39902525 - 39902419
Alignment:
Q  159 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 258  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  259 ttaatta 265  Q
    |||||||    
T  39902425 ttaatta 39902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 10362012 - 10362085
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| ||||||||||||| ||||||||| | || ||| ||||||||||||||||||| |||  ||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaatta 10362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 36290679 - 36290606
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 36290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 2984389 - 2984461
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaatta 2984461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 221  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 27428879 - 27428949
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaa 262  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| ||||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 3057152 - 3057225
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||| ||||||| ||||| |||||||||  ||| ||||||||||||||| ||| ||  |||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaatta 3057225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 18653438 - 18653385
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 245  Q
    ||||||| ||||||||||||||| |||||||||| || || |||||||||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtg 18653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 31279990 - 31279918
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcctaccataattaatta 31279918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 43222193 - 43222130
Alignment:
Q  202 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| |||||||||  |||||| || |||||| ||| |||||| |||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaatta 43222130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 4592858 - 4592804
Alignment:
Q  211 cacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||| |||||||||  |||||| ||||| |||||||||||||| |||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaatta 4592804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatgg 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 31546563 - 31546490
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||  || ||||||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatcataattaatta 31546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 41660183 - 41660110
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||  | || || ||||||||||| |||||||||||    
T  41660183 caatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaatta 41660110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 4888579 - 4888471
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  257 cattaatta 265  Q
    |||||||||    
T  4888479 cattaatta 4888471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 239  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 25084730 - 25084799
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 25084799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 40023215 - 40023327
Alignment:
Q  152 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 251  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  252 actatcattaatta 265  Q
    || | |||||||||    
T  40023314 accaccattaatta 40023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 9559017 - 9559125
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  257 cattaatta 265  Q
    |||||||||    
T  9559117 cattaatta 9559125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 39855770 - 39855884
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  250 ccactatcattaatta 265  Q
    |||  |||||||||||    
T  39855869 ccatcatcattaatta 39855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 12139400 - 12139330
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaatta 12139330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 32916033 - 32915960
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||| |||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaatta 32915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 33450627 - 33450510
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 247  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  248 tcccactatcattaatta 265  Q
    |||||  |||||||||||    
T  33450527 tcccatcatcattaatta 33450510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 47799898 - 47799971
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 47799971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 7712331 - 7712438
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| |||| ||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccat 7712429  T
Q  257 cattaatta 265  Q
    | |||||||    
T  7712430 ctttaatta 7712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  188 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 244  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 989239 - 989133
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| ||||| || ||     
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  258 attaatta 265  Q
    ||||||||    
T  989140 attaatta 989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 7373985 - 7373872
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  250 ccactatcattaatt 264  Q
    |||||||||||||||    
T  7373886 ccactatcattaatt 7373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 7362676 - 7362572
Alignment:
Q  161 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 260  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  261 aatta 265  Q
    |||||    
T  7362576 aatta 7362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 16366630 - 16366522
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  257 cattaatta 265  Q
    |||||||||    
T  16366530 cattaatta 16366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 21151264 - 21151156
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  257 cattaatta 265  Q
    |||||||||    
T  21151164 cattaatta 21151156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 47500236 - 47500354
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 246  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  247 gtcccactatcattaatta 265  Q
    ||||||  |||||||||||    
T  47500336 gtcccatcatcattaatta 47500354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 8149686 - 8149613
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaatta 8149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 45260429 - 45260498
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaatta 45260498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 29631156 - 29631052
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  258 attaatta 265  Q
    ||||||||    
T  29631059 attaatta 29631052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 44648076 - 44647984
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||||    
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtc 44647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 24193668 - 24193597
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||  |||| ||||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaatta 24193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 18198377 - 18198260
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  18198277 tcccaccatcattaatta 18198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 30588612 - 30588539
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaatta 30588539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 225  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  191 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  191 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 38365761 - 38365659
Alignment:
Q  162 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||||||  ||||||||||| || |||  |||||| || |||||||| ||| ||||| ||||||||||| ||| ||||| ||| | | ||||||||||    
T  38365761 tcttcattttttaaaataaatgtaa-tacgtaatttgaagtgagatagatacaaaaaattgataatgggtcttactattaaatggattctactatcatta 38365663  T
Q  262 atta 265  Q
    ||||    
T  38365662 atta 38365659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 46802331 - 46802390
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| ||||||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccac 46802390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  146 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 212  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  179 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 236  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 47226039 - 47226145
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| ||||||  |  ||||||| |||| ||| |||||||||| ||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaata--tggtgggtcccaccactaaatgggtcccaccat 47226136  T
Q  257 cattaatta 265  Q
    |||||||||    
T  47226137 cattaatta 47226145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 19901881 - 19901989
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  257 cattaatta 265  Q
    |||||||||    
T  19901981 cattaatta 19901989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 23610754 - 23610649
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  257 cattaa 262  Q
    ||||||    
T  23610654 cattaa 23610649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 5416429 - 5416536
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  257 cattaatta 265  Q
    |||||||||    
T  5416528 cattaatta 5416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 36532741 - 36532641
Alignment:
Q  152 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 251  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  252 ac 253  Q
    ||    
T  36532642 ac 36532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 56558400 - 56558283
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  56558300 tcccaccatcattaatta 56558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 265
Target Start/End: Complemental strand, 1871392 - 1871281
Alignment:
Q  153 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  253 ctatcattaatta 265  Q
      |||||||||||    
T  1871293 tcatcattaatta 1871281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 56453777 - 56453891
Alignment:
Q  150 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  249 cccactatcattaatta 265  Q
    ||||| |||||| ||||    
T  56453875 cccaccatcattcatta 56453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 15178628 - 15178699
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 220  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 5763159 - 5763233
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 5763233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 56269074 - 56269147
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaatta 56269147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 3952133 - 3952241
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  257 cattaatta 265  Q
    |||||||||    
T  3952233 cattaatta 3952241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 34778533 - 34778425
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  257 cattaatta 265  Q
    |||||||||    
T  34778433 cattaatta 34778425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 5815267 - 5815350
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 244  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagt 5815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 42844148 - 42844258
Alignment:
Q  154 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  254 tatcattaatta 265  Q
     |||||||||||    
T  42844247 catcattaatta 42844258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 23474188 - 23474115
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| |||||||||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaatta 23474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 24073689 - 24073620
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaatta 24073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 48914516 - 48914589
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || |||||||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaatta 48914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 18207003 - 18207111
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  257 cattaatta 265  Q
    |||||||||    
T  18207103 cattaatta 18207111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 5524524 - 5524451
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaatta 5524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 13493387 - 13493276
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  253 ctatcattaatta 265  Q
     ||||||||||||    
T  13493288 ttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 30567970 - 30567905
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaatta 30567905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 220  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 36688186 - 36688259
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| |||||||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaatta 36688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 47922324 - 47922425
Alignment:
Q  152 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 250  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  251 ca 252  Q
    ||    
T  47922424 ca 47922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 50483554 - 50483627
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaatta 50483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 33247093 - 33247201
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  257 cattaatta 265  Q
    |||||||||    
T  33247193 cattaatta 33247201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 39862629 - 39862521
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  257 cattaatta 265  Q
    |||||||||    
T  39862529 cattaatta 39862521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 33262557 - 33262623
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaatta 33262623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 1015852 - 1015925
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaatta 1015925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 12312438 - 12312547
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 255  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  256 tcattaatta 265  Q
    ||||||||||    
T  12312538 tcattaatta 12312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 46804671 - 46804635
Alignment:
Q  229 ggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaatta 46804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 12241441 - 12241479
Alignment:
Q  227 tgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaatta 12241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 38079725 - 38079791
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||  ||||||||  |||||||||| | ||||||| | |||| |||||||||||    
T  38079725 gagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaatta 38079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatg 228  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  163 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 37002249 - 37002322
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||| ||||||||||||| ||||||  |  ||| |||||  | |||||||||||||| |||||||||||    
T  37002249 caatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaatta 37002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 42010194 - 42010121
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| ||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  42010194 caatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 42010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 58774 - 58684
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 70885 - 70796
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 70796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 7220 - 7151
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaatta 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 29567 - 29640
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaatta 29640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 208175 - 208067
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  257 cattaatta 265  Q
    |||||||||    
T  208075 cattaatta 208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 16399 - 16468
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaatta 16468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 9203 - 9272
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| |||||||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaatta 9272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 17311 - 17377
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaatta 17377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 22450 - 22513
Alignment:
Q  202 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||| || |||| || ||||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaatta 22513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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