View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0200_1D_low_14 (Length: 303)

Name: NF0200_1D_low_14
Description: NF0200_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0200_1D_low_14
NF0200_1D_low_14
[»] chr3 (27 HSPs)
chr3 (16-162)||(34897794-34897940)
chr3 (140-265)||(1995448-1995573)
chr3 (151-225)||(52859272-52859346)
chr3 (157-265)||(19830394-19830502)
chr3 (157-265)||(27033655-27033763)
chr3 (157-265)||(43719910-43720018)
chr3 (155-265)||(10474400-10474509)
chr3 (196-265)||(2229987-2230056)
chr3 (157-265)||(29586340-29586447)
chr3 (158-261)||(44637950-44638052)
chr3 (191-265)||(54911658-54911732)
chr3 (192-265)||(33632827-33632899)
chr3 (196-265)||(34373835-34373904)
chr3 (157-253)||(24754673-24754769)
chr3 (157-253)||(24763670-24763766)
chr3 (150-265)||(48084823-48084939)
chr3 (202-265)||(34373593-34373656)
chr3 (192-265)||(31523666-31523739)
chr3 (157-265)||(51982549-51982656)
chr3 (155-224)||(30235416-30235484)
chr3 (157-262)||(40851781-40851886)
chr3 (192-265)||(42613084-42613157)
chr3 (196-265)||(46167397-46167466)
chr3 (192-265)||(49679268-49679341)
chr3 (200-264)||(25285843-25285907)
chr3 (162-250)||(47750274-47750361)
chr3 (192-253)||(550814-550875)
[»] chr6 (22 HSPs)
chr6 (149-265)||(7215807-7215923)
chr6 (149-265)||(2800566-2800682)
chr6 (148-265)||(4804452-4804569)
chr6 (157-265)||(7162088-7162196)
chr6 (157-265)||(21159332-21159440)
chr6 (199-265)||(27826542-27826608)
chr6 (157-265)||(17828532-17828639)
chr6 (157-265)||(17944166-17944274)
chr6 (196-265)||(12412641-12412710)
chr6 (196-265)||(13089751-13089820)
chr6 (159-253)||(23936269-23936365)
chr6 (192-265)||(24484883-24484956)
chr6 (157-265)||(227526-227635)
chr6 (194-265)||(32254031-32254102)
chr6 (196-265)||(1249150-1249217)
chr6 (150-192)||(9952993-9953035)
chr6 (192-265)||(13888520-13888594)
chr6 (192-265)||(2142291-2142364)
chr6 (216-265)||(29698167-29698216)
chr6 (192-261)||(7545645-7545715)
chr6 (200-238)||(9954332-9954370)
chr6 (158-214)||(29229149-29229204)
[»] chr1 (26 HSPs)
chr1 (149-265)||(39426214-39426330)
chr1 (148-265)||(32887735-32887851)
chr1 (153-265)||(26860010-26860121)
chr1 (151-237)||(35534741-35534825)
chr1 (157-265)||(26372256-26372362)
chr1 (157-265)||(50294026-50294134)
chr1 (192-265)||(5047379-5047452)
chr1 (196-265)||(12151771-12151840)
chr1 (157-265)||(32618805-32618911)
chr1 (196-253)||(7840681-7840738)
chr1 (150-265)||(18976260-18976376)
chr1 (157-265)||(50484390-50484498)
chr1 (191-261)||(24977248-24977318)
chr1 (192-265)||(30077642-30077715)
chr1 (146-265)||(5854799-5854917)
chr1 (203-265)||(24413291-24413353)
chr1 (196-265)||(48327156-48327224)
chr1 (192-265)||(52280037-52280110)
chr1 (158-212)||(49384627-49384680)
chr1 (208-265)||(12380924-12380981)
chr1 (208-265)||(12384991-12385048)
chr1 (150-214)||(1228496-1228560)
chr1 (148-224)||(12380831-12380907)
chr1 (148-224)||(12384898-12384974)
chr1 (149-249)||(27982072-27982171)
chr1 (157-233)||(45978041-45978117)
[»] chr2 (28 HSPs)
chr2 (151-264)||(30709115-30709228)
chr2 (150-265)||(4446852-4446967)
chr2 (148-265)||(19908784-19908899)
chr2 (150-225)||(30217517-30217592)
chr2 (149-265)||(31618724-31618838)
chr2 (157-265)||(13238685-13238793)
chr2 (157-265)||(35316829-35316937)
chr2 (174-265)||(15709772-15709862)
chr2 (200-265)||(28564896-28564961)
chr2 (153-265)||(30857638-30857749)
chr2 (149-219)||(30721564-30721632)
chr2 (174-265)||(36929720-36929810)
chr2 (150-263)||(2063359-2063472)
chr2 (192-265)||(8988859-8988932)
chr2 (191-264)||(34512022-34512095)
chr2 (192-265)||(35315286-35315359)
chr2 (192-265)||(38397085-38397158)
chr2 (193-265)||(21454494-21454565)
chr2 (192-265)||(374997-375070)
chr2 (196-265)||(23259489-23259558)
chr2 (174-264)||(15722239-15722328)
chr2 (157-223)||(22061433-22061498)
chr2 (192-261)||(19905889-19905958)
chr2 (192-265)||(23459844-23459917)
chr2 (150-250)||(35315521-35315620)
chr2 (199-265)||(4603114-4603180)
chr2 (151-200)||(6946335-6946384)
chr2 (157-265)||(36758825-36758932)
[»] chr8 (24 HSPs)
chr8 (151-265)||(42761717-42761831)
chr8 (148-265)||(21360280-21360400)
chr8 (196-265)||(30426671-30426740)
chr8 (157-265)||(28069723-28069831)
chr8 (157-265)||(36991360-36991468)
chr8 (174-265)||(18689495-18689585)
chr8 (174-265)||(24557162-24557252)
chr8 (192-265)||(26749546-26749619)
chr8 (155-265)||(42338008-42338117)
chr8 (157-265)||(6014198-6014307)
chr8 (194-265)||(36748492-36748562)
chr8 (201-265)||(10672519-10672583)
chr8 (192-248)||(17520403-17520459)
chr8 (148-265)||(10652571-10652688)
chr8 (196-261)||(40695249-40695314)
chr8 (193-265)||(34612568-34612640)
chr8 (150-265)||(45113274-45113390)
chr8 (147-238)||(37966397-37966487)
chr8 (146-212)||(20169125-20169190)
chr8 (200-265)||(24102020-24102085)
chr8 (216-265)||(28318924-28318973)
chr8 (196-265)||(41511266-41511335)
chr8 (216-265)||(44859189-44859238)
chr8 (192-264)||(3763520-3763592)
[»] chr5 (28 HSPs)
chr5 (157-265)||(29340999-29341106)
chr5 (157-265)||(35660572-35660680)
chr5 (158-265)||(4895699-4895806)
chr5 (157-265)||(11775797-11775905)
chr5 (157-265)||(18625384-18625492)
chr5 (157-265)||(32129580-32129688)
chr5 (157-265)||(37266735-37266843)
chr5 (157-264)||(43309113-43309220)
chr5 (196-265)||(14349807-14349876)
chr5 (192-265)||(31653039-31653112)
chr5 (196-265)||(40753164-40753233)
chr5 (157-265)||(13032122-13032230)
chr5 (174-265)||(34827196-34827287)
chr5 (159-265)||(39902419-39902525)
chr5 (192-265)||(10362012-10362085)
chr5 (192-265)||(36290606-36290679)
chr5 (193-265)||(2984389-2984461)
chr5 (155-221)||(9460597-9460662)
chr5 (192-262)||(27428879-27428949)
chr5 (192-265)||(3057152-3057225)
chr5 (200-261)||(14688582-14688643)
chr5 (192-245)||(18653385-18653438)
chr5 (193-265)||(31279918-31279990)
chr5 (202-265)||(43222130-43222193)
chr5 (211-265)||(4592804-4592858)
chr5 (150-184)||(21213953-21213987)
chr5 (192-265)||(31546490-31546563)
chr5 (192-265)||(41660110-41660183)
[»] chr7 (33 HSPs)
chr7 (157-265)||(4888471-4888579)
chr7 (150-239)||(47270580-47270668)
chr7 (196-265)||(25084730-25084799)
chr7 (152-265)||(40023215-40023327)
chr7 (157-265)||(9559017-9559125)
chr7 (150-265)||(39855770-39855884)
chr7 (196-265)||(12139330-12139400)
chr7 (192-265)||(32915960-32916033)
chr7 (149-265)||(33450510-33450627)
chr7 (192-265)||(47799898-47799971)
chr7 (157-265)||(7712331-7712438)
chr7 (188-244)||(29844316-29844372)
chr7 (158-265)||(989133-989239)
chr7 (150-264)||(7373872-7373985)
chr7 (161-265)||(7362572-7362676)
chr7 (157-265)||(16366522-16366630)
chr7 (157-265)||(21151156-21151264)
chr7 (148-265)||(47500236-47500354)
chr7 (192-265)||(8149613-8149686)
chr7 (196-265)||(45260429-45260498)
chr7 (158-265)||(29631052-29631156)
chr7 (157-249)||(44647984-44648076)
chr7 (194-265)||(24193597-24193668)
chr7 (148-265)||(18198260-18198377)
chr7 (192-265)||(30588539-30588612)
chr7 (157-225)||(5463867-5463934)
chr7 (191-261)||(19027680-19027751)
chr7 (191-261)||(20726885-20726956)
chr7 (162-265)||(38365659-38365761)
chr7 (194-253)||(46802331-46802390)
chr7 (146-212)||(44390835-44390900)
chr7 (179-236)||(18064588-18064643)
chr7 (157-265)||(47226039-47226145)
[»] chr4 (37 HSPs)
chr4 (157-265)||(19901881-19901989)
chr4 (157-262)||(23610649-23610754)
chr4 (157-265)||(5416429-5416536)
chr4 (152-253)||(36532641-36532741)
chr4 (148-265)||(56558283-56558400)
chr4 (153-265)||(1871281-1871392)
chr4 (150-265)||(56453777-56453891)
chr4 (149-220)||(15178628-15178699)
chr4 (191-265)||(5763159-5763233)
chr4 (192-265)||(56269074-56269147)
chr4 (157-265)||(3952133-3952241)
chr4 (157-265)||(34778425-34778533)
chr4 (158-244)||(5815267-5815350)
chr4 (154-265)||(42844148-42844258)
chr4 (192-265)||(23474115-23474188)
chr4 (196-265)||(24073620-24073689)
chr4 (192-265)||(48914516-48914589)
chr4 (157-265)||(18207003-18207111)
chr4 (192-265)||(5524451-5524524)
chr4 (155-265)||(13493276-13493387)
chr4 (200-265)||(30567905-30567970)
chr4 (155-220)||(33841766-33841830)
chr4 (192-265)||(36688186-36688259)
chr4 (152-252)||(47922324-47922425)
chr4 (192-265)||(50483554-50483627)
chr4 (157-265)||(33247093-33247201)
chr4 (157-265)||(39862521-39862629)
chr4 (199-265)||(33262557-33262623)
chr4 (192-265)||(1015852-1015925)
chr4 (157-265)||(12312438-12312547)
chr4 (229-265)||(46804635-46804671)
chr4 (227-265)||(12241441-12241479)
chr4 (199-265)||(38079725-38079791)
chr4 (191-228)||(5817976-5818013)
chr4 (163-248)||(36003216-36003300)
chr4 (192-265)||(37002249-37002322)
chr4 (192-265)||(42010121-42010194)
[»] scaffold0062 (2 HSPs)
scaffold0062 (174-265)||(58684-58774)
scaffold0062 (174-264)||(70796-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (196-265)||(7151-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (192-265)||(29567-29640)
[»] scaffold0012 (1 HSPs)
scaffold0012 (157-265)||(208067-208175)
[»] scaffold0035 (1 HSPs)
scaffold0035 (196-265)||(16399-16468)
[»] scaffold0008 (1 HSPs)
scaffold0008 (196-265)||(9203-9272)
[»] scaffold0171 (1 HSPs)
scaffold0171 (199-265)||(17311-17377)
[»] scaffold0126 (1 HSPs)
scaffold0126 (202-265)||(22450-22513)


Alignment Details
Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 34897794 - 34897940
Alignment:
Q  16 tggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttgga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34897794 tggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcgga 34897893  T
Q  116 atccaagtcaacatgtaatagaggtgggtgagaggggttaggatcct 162  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34897894 atccaagtcaacatgtaattgaggtgggtgagaggggttaggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 1995573 - 1995448
Alignment:
Q  140 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 239  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  240 taagtgggtcccactatcattaatta 265  Q
    |||||| ||| ||| |||||||||||    
T  1995473 taagtgagtctcaccatcattaatta 1995448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 225  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 19830394 - 19830502
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  257 cattaatta 265  Q
    |||||||||    
T  19830494 cattaatta 19830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 27033763 - 27033655
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  257 cattaatta 265  Q
    |||||||||    
T  27033663 cattaatta 27033655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 43719910 - 43720018
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  257 cattaatta 265  Q
    |||||||||    
T  43720010 cattaatta 43720018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 10474400 - 10474509
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 254  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| || ||||     
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccacc 10474498  T
Q  255 atcattaatta 265  Q
    | |||||||||    
T  10474499 aacattaatta 10474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 2230056 - 2229987
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaatta 2229987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 29586447 - 29586340
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  257 cattaatta 265  Q
    |||||||||    
T  29586348 cattaatta 29586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 44638052 - 44637950
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  258 atta 261  Q
    ||||    
T  44637953 atta 44637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 54911732 - 54911658
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| |||||||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 33632899 - 33632827
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | |||| |||||||||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaaatggattccac-atcattaatta 33632827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 34373904 - 34373835
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaatta 34373835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 265
Target Start/End: Complemental strand, 48084939 - 48084823
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  249 cccactatcattaatta 265  Q
    ||||  |||||||||||    
T  48084839 cccatcatcattaatta 48084823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 34373593 - 34373656
Alignment:
Q  202 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 34373656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 31523666 - 31523739
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 31523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 51982549 - 51982656
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| ||||||||| || | |  ||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcat 51982647  T
Q  257 cattaatta 265  Q
    |||||||||    
T  51982648 cattaatta 51982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 224  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 40851886 - 40851781
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  257 cattaa 262  Q
    ||||||    
T  40851786 cattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 42613157 - 42613084
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 42613084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 46167466 - 46167397
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||| || || ||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaatta 46167397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 49679268 - 49679341
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 49679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 25285843 - 25285907
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| ||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaatt 25285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 47750274 - 47750361
Alignment:
Q  162 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 250  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcc 47750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 550814 - 550875
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| |||||||||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccac 550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 7215807 - 7215923
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  249 cccactatcattaatta 265  Q
    |||||||||||||||||    
T  7215907 cccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 2800566 - 2800682
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  249 cccactatcattaatta 265  Q
    ||||| |||||| ||||    
T  2800666 cccaccatcattgatta 2800682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 4804569 - 4804452
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  4804469 tcccaccatcattaatta 4804452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 7162196 - 7162088
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  257 cattaatta 265  Q
    |||||||||    
T  7162096 cattaatta 7162088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 21159332 - 21159440
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  257 cattaatta 265  Q
    |||||||||    
T  21159432 cattaatta 21159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 27826608 - 27826542
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 27826542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 17828532 - 17828639
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||  ||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcat 17828630  T
Q  257 cattaatta 265  Q
    || ||||||    
T  17828631 caataatta 17828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 17944274 - 17944166
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  257 cattaatta 265  Q
    |||||||||    
T  17944174 cattaatta 17944166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 12412710 - 12412641
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaatta 12412641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 13089751 - 13089820
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaatta 13089820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 23936365 - 23936269
Alignment:
Q  159 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | |||||||||||||||||||||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccac 23936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 24484956 - 24484883
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 24484883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 227526 - 227635
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 255  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||  |    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  256 tcattaatta 265  Q
    ||||| ||||    
T  227626 tcattgatta 227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 32254031 - 32254102
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaatta 32254102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 1249150 - 1249217
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 1249217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacac 192  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 13888520 - 13888594
Alignment:
Q  192 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  |||||||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaatta 13888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 2142291 - 2142364
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaatta 2142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 29698216 - 29698167
Alignment:
Q  216 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcattaatta 29698167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  192 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctacca 238  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 214  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 39426330 - 39426214
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  249 cccactatcattaatta 265  Q
    |||||||||||||||||    
T  39426230 cccactatcattaatta 39426214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 32887735 - 32887851
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  32887834 tcccaccatcattaatta 32887851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 265
Target Start/End: Original strand, 26860010 - 26860121
Alignment:
Q  153 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  253 ctatcattaatta 265  Q
    | |||||||||||    
T  26860109 caatcattaatta 26860121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 237  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 26372362 - 26372256
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |     
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccac 26372265  T
Q  257 cattaatta 265  Q
    |||||||||    
T  26372264 cattaatta 26372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 50294026 - 50294134
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  257 cattaatta 265  Q
    |||||||||    
T  50294126 cattaatta 50294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 5047379 - 5047452
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaatta 5047452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 12151840 - 12151771
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaatta 12151771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 32618911 - 32618805
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  257 cattaatta 265  Q
    |||||||||    
T  32618813 cattaatta 32618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 18976260 - 18976376
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  249 cccactatcattaatta 265  Q
    ||||  |||||||||||    
T  18976360 cccatcatcattaatta 18976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 50484498 - 50484390
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||  |    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgt 50484399  T
Q  257 cattaatta 265  Q
    |||||||||    
T  50484398 cattaatta 50484390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 24977318 - 24977248
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| |||||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcatta 24977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 30077642 - 30077715
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaatta 30077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 5854799 - 5854917
Alignment:
Q  146 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 245  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  246 ggtcccactatcattaatta 265  Q
    | |||||  |||||||||||    
T  5854898 gatcccatcatcattaatta 5854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 24413291 - 24413353
Alignment:
Q  203 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaatta 24413353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 48327156 - 48327224
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||| | |||||||||  || ||||||||| ||||||||| |||| |||||||||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaatta 48327224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 52280037 - 52280110
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 52280110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 212  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 12380924 - 12380981
Alignment:
Q  208 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12380981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 12384991 - 12385048
Alignment:
Q  208 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 214  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 224  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 224  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 27982171 - 27982072
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    ||||||| |||||||| |||||   |||||||||||||| |  ||||||||||||| ||||||| | |||||| ||  ||||||| | |||||| |||||    
T  27982171 ggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagatatagacataaaaaatatatgttgggtcccatcattaaatgggt 27982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 45978117 - 45978041
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcc 233  Q
    ||||||||  |||||||||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||    
T  45978117 gatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 30709228 - 30709115
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 250  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  251 cactatcattaatt 264  Q
    ||| ||||||||||    
T  30709128 caccatcattaatt 30709115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 4446852 - 4446967
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  250 ccactatcattaatta 265  Q
     |||||||||||||||    
T  4446952 tcactatcattaatta 4446967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 19908899 - 19908784
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  19908801 tcccaccatcattaatta 19908784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 225  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 31618724 - 31618838
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  249 cccactatcattaatta 265  Q
    ||||| |||||||||||    
T  31618822 cccacaatcattaatta 31618838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 13238793 - 13238685
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  257 cattaatta 265  Q
    |||||||||    
T  13238693 cattaatta 13238685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 35316937 - 35316829
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  257 cattaatta 265  Q
    |||||||||    
T  35316837 cattaatta 35316829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 15709862 - 15709772
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 28564961 - 28564896
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 28564896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 265
Target Start/End: Original strand, 30857638 - 30857749
Alignment:
Q  153 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  253 ctatcattaatta 265  Q
    | |||||||||||    
T  30857737 ccatcattaatta 30857749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 219  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 36929810 - 36929720
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || ||||||||||||| ||| | || | |||||||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaatta 36929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 2063472 - 2063359
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  249 cccactatcattaat 263  Q
     |||| |||||||||    
T  2063373 tccaccatcattaat 2063359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 8988932 - 8988859
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaatta 8988859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 34512022 - 34512095
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| ||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaatt 34512095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 35315286 - 35315359
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || ||||||| || ||||||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaatta 35315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 38397158 - 38397085
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| |||| ||||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataatta 38397085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 21454494 - 21454565
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcattaatta 21454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 375070 - 374997
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 374997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 23259489 - 23259558
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaatta 23259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 15722328 - 15722239
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 15722239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 223  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 23459844 - 23459917
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 23459917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 35315620 - 35315521
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 4603114 - 4603180
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||| | | |||| |||||| || |||||||||  |||||||||| |||||||||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaatta 4603180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 200  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 36758825 - 36758932
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||   |||||||||||||||   ||||||||||||||||||||||| ||| ||  |  ||| ||||| | ||| |||||| |||| ||    
T  36758825 gatcctctccatttataaaaataaatggaagttg-caatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccacaat 36758923  T
Q  257 cattaatta 265  Q
    |||||||||    
T  36758924 cattaatta 36758932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 42761831 - 42761717
Alignment:
Q  151 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 250  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  251 cactatcattaatta 265  Q
    ||  |||||||||||    
T  42761731 catcatcattaatta 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 21360400 - 21360280
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 243  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  244 tgggtcccactatcattaatta 265  Q
    |||  ||||| || ||||||||    
T  21360301 tggaccccaccattattaatta 21360280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 30426671 - 30426740
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 30426740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 28069831 - 28069723
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  257 cattaatta 265  Q
    |||||||||    
T  28069731 cattaatta 28069723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 36991468 - 36991360
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  257 cattaatta 265  Q
    |||||||||    
T  36991368 cattaatta 36991360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 18689585 - 18689495
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 24557162 - 24557252
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  |||||||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 26749546 - 26749619
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 26749619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 42338008 - 42338117
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 254  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  255 atcattaatta 265  Q
    |||||||||||    
T  42338107 atcattaatta 42338117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 6014307 - 6014198
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 255  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  256 tcattaatta 265  Q
    ||||||||||    
T  6014207 tcattaatta 6014198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 36748492 - 36748562
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcattaatta 36748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 10672519 - 10672583
Alignment:
Q  201 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaatta 10672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 17520459 - 17520403
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| |||||||||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggt 17520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 10652571 - 10652688
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| |||||| ||||||||||||   |   ||| ||||||||||||||| ||| ||||| |||  |||||| ||| | ||| ||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattggg 10652670  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  10652671 tcccaccatcattaatta 10652688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 40695249 - 40695314
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| |||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcatta 40695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 34612640 - 34612568
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaatta 34612568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 265
Target Start/End: Complemental strand, 45113390 - 45113274
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| |||||| |||||||||| |   |   ||||||||||||| ||||||||| || |||||||  ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  249 cccactatcattaatta 265  Q
    ||||  |||||||||||    
T  45113290 cccatcatcattaatta 45113274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 37966397 - 37966487
Alignment:
Q  147 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacca 238  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | ||||||||||    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctacca 37966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  146 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 212  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 24102085 - 24102020
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| | |||||||||  ||| |||||||| |||||| || |||| |||||||||||    
T  24102085 agagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaatta 24102020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 28318924 - 28318973
Alignment:
Q  216 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||||||||    
T  28318924 aaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaatta 28318973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 41511335 - 41511266
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| ||||||||| | | |||||||||| ||||||||| || ||||||| | |||| |||||||||||    
T  41511335 ttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaatta 41511266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 44859189 - 44859238
Alignment:
Q  216 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||  ||||| |||||| |||||||||||||| |||||||||||    
T  44859189 aaaatagatggtgggttctaccactaagtgggtcccaccatcattaatta 44859238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 3763520 - 3763592
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    |||||||||||| | |||||| | |||| || |  |||||||||||||||||||||| ||||  |||||||||    
T  3763520 caatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaatt 3763592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 29341106 - 29340999
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  257 cattaatta 265  Q
    |||||||||    
T  29341007 cattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 35660572 - 35660680
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  257 cattaatta 265  Q
    |||||||||    
T  35660672 cattaatta 35660680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 4895699 - 4895806
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  258 attaatta 265  Q
    ||||||||    
T  4895799 attaatta 4895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 11775905 - 11775797
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||  |    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgt 11775806  T
Q  257 cattaatta 265  Q
    |||||||||    
T  11775805 cattaatta 11775797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 18625384 - 18625492
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  257 cattaatta 265  Q
    |||||||||    
T  18625484 cattaatta 18625492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 32129580 - 32129688
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  257 cattaatta 265  Q
    |||||||||    
T  32129680 cattaatta 32129688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 37266843 - 37266735
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  257 cattaatta 265  Q
    |||||||||    
T  37266743 cattaatta 37266735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 43309220 - 43309113
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  257 cattaatt 264  Q
    ||||||||    
T  43309120 cattaatt 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 14349876 - 14349807
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 14349807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 31653112 - 31653039
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| |||||||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 40753164 - 40753233
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaatta 40753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 13032230 - 13032122
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  257 cattaatta 265  Q
    |||||||||    
T  13032130 cattaatta 13032122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 34827287 - 34827196
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| |||||||||||||| ||| |||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaatta 34827196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 265
Target Start/End: Complemental strand, 39902525 - 39902419
Alignment:
Q  159 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 258  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  259 ttaatta 265  Q
    |||||||    
T  39902425 ttaatta 39902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 10362012 - 10362085
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| ||||||||||||| ||||||||| | || ||| ||||||||||||||||||| |||  ||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaatta 10362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 36290679 - 36290606
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 36290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 2984389 - 2984461
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaatta 2984461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 221  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 27428879 - 27428949
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaa 262  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| ||||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 3057152 - 3057225
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||| ||||||| ||||| |||||||||  ||| ||||||||||||||| ||| ||  |||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaatta 3057225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 18653438 - 18653385
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 245  Q
    ||||||| ||||||||||||||| |||||||||| || || |||||||||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtg 18653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 31279990 - 31279918
Alignment:
Q  193 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcctaccataattaatta 31279918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 43222193 - 43222130
Alignment:
Q  202 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| |||||||||  |||||| || |||||| ||| |||||| |||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaatta 43222130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 4592858 - 4592804
Alignment:
Q  211 cacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||| |||||||||  |||||| ||||| |||||||||||||| |||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaatta 4592804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatgg 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 31546563 - 31546490
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||  || ||||||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatcataattaatta 31546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 41660183 - 41660110
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||  | || || ||||||||||| |||||||||||    
T  41660183 caatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaatta 41660110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 4888579 - 4888471
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  257 cattaatta 265  Q
    |||||||||    
T  4888479 cattaatta 4888471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 239  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 25084730 - 25084799
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 25084799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 40023215 - 40023327
Alignment:
Q  152 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 251  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  252 actatcattaatta 265  Q
    || | |||||||||    
T  40023314 accaccattaatta 40023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 9559017 - 9559125
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  257 cattaatta 265  Q
    |||||||||    
T  9559117 cattaatta 9559125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 39855770 - 39855884
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  250 ccactatcattaatta 265  Q
    |||  |||||||||||    
T  39855869 ccatcatcattaatta 39855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 12139400 - 12139330
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaatta 12139330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 32916033 - 32915960
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||| |||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaatta 32915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 33450627 - 33450510
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 247  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  248 tcccactatcattaatta 265  Q
    |||||  |||||||||||    
T  33450527 tcccatcatcattaatta 33450510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 47799898 - 47799971
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 47799971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 7712331 - 7712438
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| |||| ||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccat 7712429  T
Q  257 cattaatta 265  Q
    | |||||||    
T  7712430 ctttaatta 7712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  188 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 244  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 989239 - 989133
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| ||||| || ||     
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  258 attaatta 265  Q
    ||||||||    
T  989140 attaatta 989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 7373985 - 7373872
Alignment:
Q  150 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  250 ccactatcattaatt 264  Q
    |||||||||||||||    
T  7373886 ccactatcattaatt 7373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 7362676 - 7362572
Alignment:
Q  161 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 260  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  261 aatta 265  Q
    |||||    
T  7362576 aatta 7362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 16366630 - 16366522
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  257 cattaatta 265  Q
    |||||||||    
T  16366530 cattaatta 16366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 21151264 - 21151156
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  257 cattaatta 265  Q
    |||||||||    
T  21151164 cattaatta 21151156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 47500236 - 47500354
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 246  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  247 gtcccactatcattaatta 265  Q
    ||||||  |||||||||||    
T  47500336 gtcccatcatcattaatta 47500354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 8149686 - 8149613
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaatta 8149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 45260429 - 45260498
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaatta 45260498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 29631156 - 29631052
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 257  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  258 attaatta 265  Q
    ||||||||    
T  29631059 attaatta 29631052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 44648076 - 44647984
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 249  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||||    
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtc 44647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 24193668 - 24193597
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||  |||| ||||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaatta 24193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 18198377 - 18198260
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  18198277 tcccaccatcattaatta 18198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 30588612 - 30588539
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaatta 30588539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 225  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  191 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  191 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 38365761 - 38365659
Alignment:
Q  162 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 261  Q
    |||||||||  ||||||||||| || |||  |||||| || |||||||| ||| ||||| ||||||||||| ||| ||||| ||| | | ||||||||||    
T  38365761 tcttcattttttaaaataaatgtaa-tacgtaatttgaagtgagatagatacaaaaaattgataatgggtcttactattaaatggattctactatcatta 38365663  T
Q  262 atta 265  Q
    ||||    
T  38365662 atta 38365659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 46802331 - 46802390
Alignment:
Q  194 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| ||||||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccac 46802390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  146 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 212  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  179 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 236  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 47226039 - 47226145
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| ||||||  |  ||||||| |||| ||| |||||||||| ||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaata--tggtgggtcccaccactaaatgggtcccaccat 47226136  T
Q  257 cattaatta 265  Q
    |||||||||    
T  47226137 cattaatta 47226145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 19901881 - 19901989
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  257 cattaatta 265  Q
    |||||||||    
T  19901981 cattaatta 19901989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 23610754 - 23610649
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  257 cattaa 262  Q
    ||||||    
T  23610654 cattaa 23610649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 5416429 - 5416536
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  257 cattaatta 265  Q
    |||||||||    
T  5416528 cattaatta 5416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 36532741 - 36532641
Alignment:
Q  152 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 251  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  252 ac 253  Q
    ||    
T  36532642 ac 36532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 56558400 - 56558283
Alignment:
Q  148 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 247  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  248 tcccactatcattaatta 265  Q
    |||||| |||||||||||    
T  56558300 tcccaccatcattaatta 56558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 265
Target Start/End: Complemental strand, 1871392 - 1871281
Alignment:
Q  153 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  253 ctatcattaatta 265  Q
      |||||||||||    
T  1871293 tcatcattaatta 1871281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 56453777 - 56453891
Alignment:
Q  150 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  249 cccactatcattaatta 265  Q
    ||||| |||||| ||||    
T  56453875 cccaccatcattcatta 56453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 15178628 - 15178699
Alignment:
Q  149 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 220  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 5763159 - 5763233
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 5763233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 56269074 - 56269147
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaatta 56269147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 3952133 - 3952241
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  257 cattaatta 265  Q
    |||||||||    
T  3952233 cattaatta 3952241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 34778533 - 34778425
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  257 cattaatta 265  Q
    |||||||||    
T  34778433 cattaatta 34778425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 5815267 - 5815350
Alignment:
Q  158 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 244  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagt 5815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 42844148 - 42844258
Alignment:
Q  154 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 253  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  254 tatcattaatta 265  Q
     |||||||||||    
T  42844247 catcattaatta 42844258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 23474188 - 23474115
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| |||||||||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaatta 23474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 24073689 - 24073620
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaatta 24073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 48914516 - 48914589
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || |||||||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaatta 48914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 18207003 - 18207111
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  257 cattaatta 265  Q
    |||||||||    
T  18207103 cattaatta 18207111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 5524524 - 5524451
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaatta 5524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 13493387 - 13493276
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 252  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  253 ctatcattaatta 265  Q
     ||||||||||||    
T  13493288 ttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 30567970 - 30567905
Alignment:
Q  200 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaatta 30567905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  155 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 220  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 36688186 - 36688259
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| |||||||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaatta 36688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 47922324 - 47922425
Alignment:
Q  152 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 250  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  251 ca 252  Q
    ||    
T  47922424 ca 47922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 50483554 - 50483627
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaatta 50483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 33247093 - 33247201
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  257 cattaatta 265  Q
    |||||||||    
T  33247193 cattaatta 33247201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 39862629 - 39862521
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  257 cattaatta 265  Q
    |||||||||    
T  39862529 cattaatta 39862521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 33262557 - 33262623
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaatta 33262623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 1015852 - 1015925
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaatta 1015925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 12312438 - 12312547
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 255  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  256 tcattaatta 265  Q
    ||||||||||    
T  12312538 tcattaatta 12312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 46804671 - 46804635
Alignment:
Q  229 ggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaatta 46804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 12241441 - 12241479
Alignment:
Q  227 tgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaatta 12241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 38079725 - 38079791
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||  ||||||||  |||||||||| | ||||||| | |||| |||||||||||    
T  38079725 gagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaatta 38079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  191 acaatttggagagagatagacacataaaatagataatg 228  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  163 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 248  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 37002249 - 37002322
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||| ||||||||||||| ||||||  |  ||| |||||  | |||||||||||||| |||||||||||    
T  37002249 caatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaatta 37002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 42010194 - 42010121
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| ||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  42010194 caatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 42010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 58774 - 58684
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 70885 - 70796
Alignment:
Q  174 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 264  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 70796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 7220 - 7151
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaatta 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 29567 - 29640
Alignment:
Q  192 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaatta 29640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 208175 - 208067
Alignment:
Q  157 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 256  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  257 cattaatta 265  Q
    |||||||||    
T  208075 cattaatta 208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 16399 - 16468
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaatta 16468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 9203 - 9272
Alignment:
Q  196 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| |||||||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaatta 9272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 17311 - 17377
Alignment:
Q  199 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaatta 17377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 22450 - 22513
Alignment:
Q  202 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 265  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||| || |||| || ||||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaatta 22513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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