View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0201_low_11 (Length: 311)
Name: NF0201_low_11
Description: NF0201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0201_low_11 |
 | |
|
| [»] chr7 (5 HSPs) |
| |
|
| [»] chr4 (9 HSPs) |
| |
|
| [»] scaffold0028 (2 HSPs) |
| |
|
| [»] chr6 (4 HSPs) |
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|
| [»] chr5 (11 HSPs) |
| |
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| [»] scaffold0482 (1 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
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|
| [»] chr2 (3 HSPs) |
| |
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| [»] scaffold0040 (2 HSPs) |
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|
| [»] scaffold0233 (1 HSPs) |
| |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 7592603 - 7592913
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7592603 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
7592702 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7592703 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
7592802 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7592803 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
7592902 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
7592903 |
cgatccaaaca |
7592913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 15172916 - 15173157
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15172916 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
15173015 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15173016 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
15173115 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttg |
242 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
15173116 |
cgcaaacaaagaaaattccatgctctctcactatatctcttg |
15173157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 15202342 - 15202571
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15202342 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacaactctattttctcccttgatcaccaagaca |
15202441 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15202442 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaag---atatctctctaagtgaaaatcatcactacaaacaaagctctt |
15202538 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcacta |
233 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
15202539 |
cgcaaacaaaggaaattccaagctctctcacta |
15202571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 4119013 - 4118893
Alignment:
| Q |
3 |
tggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacact |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4119013 |
tggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacact |
4118914 |
T |
|
| Q |
103 |
cctcacctataaatacaaggg |
123 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4118913 |
cctcacctataaatacaaggg |
4118893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 15174385 - 15174447
Alignment:
| Q |
248 |
tctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttattcgatccaaaca |
311 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15174385 |
tctctcttgaatttgc-tcttgtaaaactcaaacaaagatttgagtatttatttgatccaaaca |
15174447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 3242878 - 3242568
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3242878 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
3242779 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3242778 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
3242679 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3242678 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
3242579 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
3242578 |
cgatccaaaca |
3242568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 3917663 - 3917973
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3917663 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
3917762 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3917763 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
3917862 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3917863 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
3917962 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
3917963 |
cgatccaaaca |
3917973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 26812105 - 26812415
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26812105 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
26812204 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26812205 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
26812304 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26812305 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
26812404 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
26812405 |
cgatccaaaca |
26812415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 26821572 - 26821882
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26821572 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
26821671 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26821672 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
26821771 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26821772 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
26821871 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
26821872 |
cgatccaaaca |
26821882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 54690504 - 54690194
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
54690504 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
54690405 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
54690404 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgaaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
54690305 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54690304 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
54690205 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
54690204 |
cgatccaaaca |
54690194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 54699935 - 54699625
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
54699935 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
54699836 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
54699835 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgaaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
54699736 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54699735 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
54699636 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
54699635 |
cgatccaaaca |
54699625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 37058684 - 37058993
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
37058684 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacaactctattttctcccttgatcaccaagaca |
37058783 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37058784 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacagagctctt |
37058883 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
37058884 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgc-tcttgtaaaactcaaacaaagatttgagtatttatt |
37058982 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
|||||||||| |
|
|
| T |
37058983 |
tgatccaaaca |
37058993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 3 - 311
Target Start/End: Complemental strand, 15843486 - 15843179
Alignment:
| Q |
3 |
tggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacact |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15843486 |
tggctattttaaagaagaaaagagaaatcaattgagactttgaacagctataaaaaacgtgtccaacagctctattttctcccttgatcaccaagacact |
15843387 |
T |
|
| Q |
103 |
cctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctcttcg |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15843386 |
cctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctcttcg |
15843287 |
T |
|
| Q |
203 |
caaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttattcg |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
15843286 |
caaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgc-tattgtaaaactcaaacaaagatttgagtatttatttg |
15843188 |
T |
|
| Q |
303 |
atccaaaca |
311 |
Q |
| |
|
||||||||| |
|
|
| T |
15843187 |
atccaaaca |
15843179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 18125981 - 18125754
Alignment:
| Q |
14 |
aagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcctcacctata |
113 |
Q |
| |
|
||||||||||| |||| ||||||| || ||||||||| |||||| |||||||||| |||| ||||| | ||||||||| ||| |||||| || |||| |
|
|
| T |
18125981 |
aagaagaaaagtgaaaccaattgaagctttggacagctg-caaaaatgtgtccaacaactcttttttcacacttgatcactaagtcactccacatatata |
18125883 |
T |
|
| Q |
114 |
aatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagc |
212 |
Q |
| |
|
|||||||| | ||| ||| | || |||| ||||| |||| || | ||||||| ||| ||||||||||||||| || ||||||||| |||||||| | |
|
|
| T |
18125882 |
aatacaagtggttttaaagcttcaaataaagaattttgaaagcaaacattctctct-agtaaaaatcatcactacatac-aagctcttcacaaacaaa-c |
18125786 |
T |
|
| Q |
213 |
aaattccaagctctctcactatatctcttgga |
244 |
Q |
| |
|
|||| ||||||||||||| |||| || ||||| |
|
|
| T |
18125785 |
aaataccaagctctctcattataccttttgga |
18125754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 28352312 - 28352004
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28352312 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
28352213 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28352212 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
28352113 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28352112 |
cacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
28352013 |
T |
|
| Q |
301 |
cgatccaaa |
309 |
Q |
| |
|
||||||||| |
|
|
| T |
28352012 |
cgatccaaa |
28352004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 28368244 - 28367937
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
28368244 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggt-accaagaca |
28368146 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28368145 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
28368046 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28368045 |
cacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
28367946 |
T |
|
| Q |
301 |
cgatccaaa |
309 |
Q |
| |
|
||||||||| |
|
|
| T |
28367945 |
cgatccaaa |
28367937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 28376062 - 28375755
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
28376062 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggt-accaagaca |
28375964 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28375963 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
28375864 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28375863 |
cacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
28375764 |
T |
|
| Q |
301 |
cgatccaaa |
309 |
Q |
| |
|
||||||||| |
|
|
| T |
28375763 |
cgatccaaa |
28375755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 28383884 - 28383577
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
28383884 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggt-accaagaca |
28383786 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28383785 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
28383686 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28383685 |
cacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
28383586 |
T |
|
| Q |
301 |
cgatccaaa |
309 |
Q |
| |
|
||||||||| |
|
|
| T |
28383585 |
cgatccaaa |
28383577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 38529729 - 38529524
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaaga-gaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagac |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38529729 |
tctggctattttaaagaagaaaaaaagaaatcaattgagactttggacaactataaaaaacgtgtccaacaactctattttctcccttgatcaccaagac |
38529630 |
T |
|
| Q |
100 |
actcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctct |
199 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38529629 |
actcctcgcctataaatacaagggcctttgaagattataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctct |
38529530 |
T |
|
| Q |
200 |
tcgcaa |
205 |
Q |
| |
|
|||||| |
|
|
| T |
38529529 |
tcgcaa |
38529524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 6 - 310
Target Start/End: Original strand, 4951198 - 4951502
Alignment:
| Q |
6 |
ctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcct |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
4951198 |
ctatttttaagaagaaaagagaaatcaattgagactttagacagttatcaaaaacgtgtccaacaactctagtttctcccttgatcaccaagacactcct |
4951297 |
T |
|
| Q |
106 |
cacctataaatacaagggcctttgaaggtcataagcaag-agttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctcttcgc |
203 |
Q |
| |
|
|||||||||||||||| | ||||||||| | ||| || ||||||||||| |||| |||||| |||||||||||| ||||||||||||| ||||| || |
|
|
| T |
4951298 |
cacctataaatacaagtggttttgaaggtta-aagatagaagttttgcaagtaaatattctctc-aagtgaaaatcaccactacaaacaaaactctttgc |
4951395 |
T |
|
| Q |
204 |
aaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaa-ctcaaacaaagatttgagtatttattcg |
302 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||| ||||| | |||||||| | ||| ||| ||||||||||| ||||||||||||| | |
|
|
| T |
4951396 |
aaacaaagcaaattccaagttctctcactatgtctcttggatcttctctttcgaatttgc-tattgtaaaatctcaaacaaagtgttgagtatttatttg |
4951494 |
T |
|
| Q |
303 |
atccaaac |
310 |
Q |
| |
|
|||||||| |
|
|
| T |
4951495 |
atccaaac |
4951502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 24794932 - 24794827
Alignment:
| Q |
206 |
acaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttattcgatc |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
24794932 |
acaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatc |
24794833 |
T |
|
| Q |
306 |
caaaca |
311 |
Q |
| |
|
|||||| |
|
|
| T |
24794832 |
caaaca |
24794827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 27168983 - 27169216
Alignment:
| Q |
14 |
aagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcctcacctata |
113 |
Q |
| |
|
||||||||||| |||||||||||| | ||||||||| |||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
27168983 |
aagaagaaaagtgaaatcaattgaatcgttggacagctgcactaaacgtgtccaacacctctattttcactcttgatcaccaagtcactcctcacctata |
27169082 |
T |
|
| Q |
114 |
aatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagc |
212 |
Q |
| |
|
|| ||||| | | |||||| || |||||||||| ||| | | |||||| |||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
27169083 |
aacacaagtggtctagaaggttctatataagagttttgaaagtaagcattctctc-aagtgaaaatcatcactacatacaaagttcttcacaaacaaa-a |
27169180 |
T |
|
| Q |
213 |
aaattccaagctctctcactatatctcttggatcat |
248 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||||| |
|
|
| T |
27169181 |
aaatttcaagctctctcattatatcttttggatcat |
27169216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 7784738 - 7784561
Alignment:
| Q |
10 |
tttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcctcacc |
109 |
Q |
| |
|
||||||||||||||| |||||||||||| || |||| |||| ||||||| ||||||||| | |||||||| | ||||||||||||| |||| |||||| |
|
|
| T |
7784738 |
tttaaagaagaaaagtgaaatcaattgaagctttggaaagctgccaaaaacatgtccaacaacactattttcactcttgatcaccaaggcactgctcacc |
7784639 |
T |
|
| Q |
110 |
tataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactac |
187 |
Q |
| |
|
|||||||||||| | | ||||||| ||| ||||||||| |||| | || |||||| ||||||||||||||||||| |
|
|
| T |
7784638 |
tataaatacaagtggttatgaaggttgaaagtaagagttttaaaagcaagtattctctc-aagtgaaaatcatcactac |
7784561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 4362085 - 4361858
Alignment:
| Q |
14 |
aagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcctcacctata |
113 |
Q |
| |
|
||||||||||| |||| ||||||| || ||||||||| |||||| |||||||||| |||| ||||| | ||||||||| ||| |||||| || |||| |
|
|
| T |
4362085 |
aagaagaaaagtgaaaccaattgaagctttggacagctg-caaaaatgtgtccaacaactcttttttcacacttgatcactaagtcactccacatatata |
4361987 |
T |
|
| Q |
114 |
aatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagc |
212 |
Q |
| |
|
|||||||| | ||| ||| | || |||| ||||| |||| || | ||||||| ||| ||||||||||||||| || ||||||||| |||||||| | |
|
|
| T |
4361986 |
aatacaagtggttttaaagcttcaaataaagaattttgaaagcaaacattctctct-agtaaaaatcatcactacatac-aagctcttcacaaacaaa-c |
4361890 |
T |
|
| Q |
213 |
aaattccaagctctctcactatatctcttgga |
244 |
Q |
| |
|
|||| ||||||||||||| |||| || ||||| |
|
|
| T |
4361889 |
aaataccaagctctctcattataccttttgga |
4361858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 279; Significance: 1e-156; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 95022 - 94712
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
95022 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
94923 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
94922 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
94823 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |
|
|
| T |
94822 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatctatt |
94723 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
94722 |
cgatccaaaca |
94712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 104463 - 104153
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
104463 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
104364 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
104363 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
104264 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |
|
|
| T |
104263 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatctatt |
104164 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
104163 |
cgatccaaaca |
104153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 23896207 - 23895897
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23896207 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacaactatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
23896108 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23896107 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgtaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
23896008 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23896007 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
23895908 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
|||||||||| |
|
|
| T |
23895907 |
tgatccaaaca |
23895897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 18420149 - 18420458
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18420149 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
18420248 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18420249 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
18420348 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18420349 |
cgcaaacaaagcaaattcaaagctctctcactatatctcttggatcttctcacttgaatttgc-tcttgtaaaactcaaacaaagatttgagtatttatt |
18420447 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
|||||||||| |
|
|
| T |
18420448 |
tgatccaaaca |
18420458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 14101796 - 14102022
Alignment:
| Q |
9 |
ttttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcctcac |
108 |
Q |
| |
|
|||||| ||||||||| |||||||||||| || ||||||||| ||||||||| ||||||| |||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
14101796 |
ttttaatgaagaaaagtgaaatcaattgaagctttggacagctgccaaaaacgtatccaacaactctattttcactcttgatcaccaaggcactcctcac |
14101895 |
T |
|
| Q |
109 |
ctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctcttcgcaaac |
207 |
Q |
| |
|
|||||||||||| | |||||| || | | ||||||||||| |||| |||| | |||| |||||||||||||||||||| ||||| |||||| ||| |
|
|
| T |
14101896 |
ctataaatacaattggttttgaatgttaaatgcaagagtttttaaagcaaatattatctc-aagtgaaaatcatcactacatacaaaactcttcacaatt |
14101994 |
T |
|
| Q |
208 |
aaagcaaattccaagctctctcactatat |
236 |
Q |
| |
|
||| |||| ||||| |||||||||||||| |
|
|
| T |
14101995 |
aaaacaaactccaa-ctctctcactatat |
14102022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 12173040 - 12173144
Alignment:
| Q |
14 |
aagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcctcacctata |
113 |
Q |
| |
|
||||||||||| |||||||||||| ||| |||| | |||| ||||| ||| |||||| |||||||||| || |||||||| ||||||| || ||||| |
|
|
| T |
12173040 |
aagaagaaaagtgaaatcaattgaaactttggatatctat-aaaaatgtgcccaacaactctattttcatagtttatcaccaacacactccacatctata |
12173138 |
T |
|
| Q |
114 |
aataca |
119 |
Q |
| |
|
|||||| |
|
|
| T |
12173139 |
aataca |
12173144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 22488783 - 22489092
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22488783 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
22488882 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22488883 |
ctcctcacctataaatacaagggtctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
22488982 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||| |
|
|
| T |
22488983 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgc-tattgtaaaactcaaacaaagatttgagtatttatt |
22489081 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
|||||||||| |
|
|
| T |
22489082 |
tgatccaaaca |
22489092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 24412425 - 24412735
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24412425 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
24412524 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24412525 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
24412624 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24412625 |
cacatacaaagcaaattccaagctctctcactgtatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
24412724 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
24412725 |
cgatccaaaca |
24412735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 18568635 - 18568945
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18568635 |
tctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
18568734 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18568735 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgaaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
18568834 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18568835 |
cgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
18568934 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
18568935 |
cgatccaaaca |
18568945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 24421874 - 24422184
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
24421874 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccagcagctctattttctcccttggtcaccaagaca |
24421973 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24421974 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
24422073 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24422074 |
cacatacaaagcaaattccaagctctctcactgtatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
24422173 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
24422174 |
cgatccaaaca |
24422184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 30445420 - 30445110
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30445420 |
tctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
30445321 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30445320 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgaaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
30445221 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30445220 |
cacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
30445121 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
| ||||||||| |
|
|
| T |
30445120 |
ctatccaaaca |
30445110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 30454792 - 30454482
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30454792 |
tctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
30454693 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30454692 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgaaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
30454593 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30454592 |
cacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
30454493 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
| ||||||||| |
|
|
| T |
30454492 |
ctatccaaaca |
30454482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 30459850 - 30459540
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30459850 |
tctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
30459751 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30459750 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgaaagctaatatctctcaaagtgaaaatcatcactacaaacaaagctctt |
30459651 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30459650 |
cacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
30459551 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
| ||||||||| |
|
|
| T |
30459550 |
ctatccaaaca |
30459540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 5 - 311
Target Start/End: Original strand, 4635563 - 4635852
Alignment:
| Q |
5 |
gctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcc |
104 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4635563 |
gctattttaaagaagaaaagaaaaatcaattgagactttggacaactatcaaaaacgcatccaacagctctattttctcccttgatcaccaagacactcc |
4635662 |
T |
|
| Q |
105 |
tcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctcttcgca |
204 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4635663 |
tcacctataaatacaagggtctttgaaggtcataagctagagttttgcaagctaatatctctctaagtgaaaatcatcact----------------gca |
4635746 |
T |
|
| Q |
205 |
aacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttattcgat |
304 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||| | ||| ||||||||||||||| || |||||||||| ||| |
|
|
| T |
4635747 |
aacaaagcaaattccaagctccctcactatatctcttggatcttctctttcgaatttgc-tattgtaaaactcaaacaaagaattaagtatttatttgat |
4635845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 22118545 - 22118443
Alignment:
| Q |
142 |
aagagttttgcaagctaatatctctct-aagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctct |
240 |
Q |
| |
|
|||||||||| |||| ||||| ||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||| ||||| ||||||||| |
|
|
| T |
22118545 |
aagagttttgaaagcaaatat-tctctcaagtgaaaatcatcactacatacaaagctcttcacaaacaaatcaaattccaagc--tctcattatatctct |
22118449 |
T |
|
| Q |
241 |
tggatc |
246 |
Q |
| |
|
|||||| |
|
|
| T |
22118448 |
tggatc |
22118443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24278900 - 24278813
Alignment:
| Q |
1 |
tctggctatttt-aaagaagaaaagagaaatcaattgagactgtggacagctatca-aaaacgtgtccaacagctctattttctccct |
86 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||| ||||| | ||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
24278900 |
tctggctatttttaaagaagaagagagaaatcaactgagattttggacagctatcaaaaaacgtgtccaacaactctattttctccct |
24278813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24383314 - 24383401
Alignment:
| Q |
1 |
tctggctatttt-aaagaagaaaagagaaatcaattgagactgtggacagctatc-aaaaacgtgtccaacagctctattttctccct |
86 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||| ||||| | |||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
24383314 |
tctggctatttttaaagaagaagagagaaatcaactgagattttggacagctatcaaaaaacgtgtccaacaactctattttctccct |
24383401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 3130 - 3440
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3130 |
tctggctattttaaagaagaaaagagaaatcaaaagatactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
3229 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
3230 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgtaagctaatatctgtcaaagtgaaaatcatcactacaaacaaagctctt |
3329 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3330 |
cacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
3429 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
3430 |
cgatccaaaca |
3440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 7789669 - 7789359
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7789669 |
tctggctattttaaagaagaaaagagaaatcaaaagatactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagaca |
7789570 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
7789569 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgtaagctaatatctgtcaaagtgaaaatcatcactacaaacaaagctctt |
7789470 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7789469 |
cacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
7789370 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
7789369 |
cgatccaaaca |
7789359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 152 - 311
Target Start/End: Original strand, 20713818 - 20713976
Alignment:
| Q |
152 |
caagctaatatctctctaagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20713818 |
caagctaatatctctctaagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagaaaattccaagctctctcactatatctcttggatcttctc |
20713917 |
T |
|
| Q |
252 |
tcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttattcgatccaaaca |
311 |
Q |
| |
|
| | |||||||| | ||| || |||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
20713918 |
tttcgaatttgc-tattgtaaatctcaaacaaagaattgagtatttatttgatccaaaca |
20713976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 15833720 - 15833798
Alignment:
| Q |
169 |
aagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcat |
248 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || |||||||| |||||| ||||| |||||| ||||||| ||||||||| |
|
|
| T |
15833720 |
aagtgaaaatcatcactacatacaaagctcctcacaaacaaa-caaattgcaagccctctcattatatcttttggatcat |
15833798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 238
Target Start/End: Original strand, 15827294 - 15827476
Alignment:
| Q |
60 |
cgtgtccaacagctctattttctcccttgatcaccaagacactcctcacctataaatacaagggcctttgaaggtc---at--aagcaagagttttgcaa |
154 |
Q |
| |
|
|||| |||||| ||||||||| | |||||| | ||| ||||||||||||||||||||||| | |||||||| || |||||||||||||| || |
|
|
| T |
15827294 |
cgtgaccaacaaatctattttcactcttgattaacaaatcactcctcacctataaatacaagtggtcttgaaggttgaaattaaagcaagagttttgaaa |
15827393 |
T |
|
| Q |
155 |
gctaatatctctct-aagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatct |
238 |
Q |
| |
|
|| | || ||||| |||||||||||||||||||| |||||| | ||| |||||||| ||||||||||||| ||||| ||||||| |
|
|
| T |
15827394 |
gcaagcat-tctctcaagtgaaaatcatcactacatacaaagtttttcacaaacaaa-caaattccaagctatctcattatatct |
15827476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 31711056 - 31710747
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
31711056 |
tctggctatttttaagaagaaaagagaaatcaattgagactttggacaactatcaaaaacgcgtccaacaactctattttctcacttgatcaccaagaca |
31710957 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31710956 |
ctcctcacctataaatacaagggcctttgaaggtcataagtaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
31710857 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||| | ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
31710856 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctttcgagtttgc-tattgtaaaactcaaacaaagaattgagtatttatt |
31710758 |
T |
|
| Q |
301 |
cgatccaaaca |
311 |
Q |
| |
|
|||||||||| |
|
|
| T |
31710757 |
tgatccaaaca |
31710747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 24023332 - 24023025
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
24023332 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggatagctatcaaaaacgtgtccaacaactctattttctcccttgatcactaagaca |
24023233 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24023232 |
ctcctcacctataaatacaagggcttttgaaggttataaccaagacttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
24023133 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| | ||| |||||||||||||| ||||||||||||| |
|
|
| T |
24023132 |
cgcaaataaagcaaattccaagctctctcactatatctcttggatcttctctttcgaatttgc-tattgtaaaactcaaacaaagtattgagtatttatt |
24023034 |
T |
|
| Q |
301 |
cgatccaaa |
309 |
Q |
| |
|
|||||||| |
|
|
| T |
24023033 |
tgatccaaa |
24023025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 14272653 - 14272889
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14272653 |
tctggctatttataagtagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacaactctattttctcccttgatcaccaagaca |
14272752 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctct |
199 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| | | | |||||||||| |||| || | ||||| | | ||||||||||||||||| ||||| |||| |
|
|
| T |
14272753 |
ctcctcacctataaatacaagggtctttgaaggttaaaggtaagagttttgaaagcaaacattctct-tgaatgaaaatcatcactacatacaaaactct |
14272851 |
T |
|
| Q |
200 |
tcgcaaacaaagcaaattccaagctctctcactatatct |
238 |
Q |
| |
|
|| |||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
14272852 |
tcacaaacaaaacaaactccaa-ctctctcactatatct |
14272889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 230; Significance: 1e-127; HSPs: 2)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 31398 - 31104
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31398 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttgttcaccaagaca |
31299 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31298 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaaca-------- |
31207 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31206 |
--------aagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatt |
31115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 9647 - 9887
Alignment:
| Q |
5 |
gctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagacactcc |
104 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||| |
|
|
| T |
9647 |
gctatttttaagaagaaaagtgaaaacaaatgagactttggacagctatcaaaaatgtgtccatcaactctattttcacccttgatcaccaagacactcc |
9746 |
T |
|
| Q |
105 |
tcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctcttcgc |
203 |
Q |
| |
|
||||||||| |||||| ||||||||| | | |||||||||||| ||| |||| |||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9747 |
tcacctatatatacaaatagttttgaaggttaaaggcaagagttttgaaagaaaatattctctc-aagtgaaaaacatcactacaaacaaagctcttcgc |
9845 |
T |
|
| Q |
204 |
aaacaaagcaaattccaagctctctcactatatctcttggat |
245 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
9846 |
aaacaaagcaaatttcaagctctctcactatatcacttggat |
9887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 26695 - 26402
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26695 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggatagctatcaaaaatgtgtccaacatctctattttctcccttgatcaccaagaca |
26596 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaacaaagctctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26595 |
ctcctcacctataaatacaagggcctttgaaggtcataagtaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaaca-------- |
26504 |
T |
|
| Q |
201 |
cgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcatcttggtaaactcaaacaaagatttgagtatttatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26503 |
--------aagcaaattccaagctctctcactatatcccttggatcttctctcttgaatttgc-tcttgtaaaactcaaacaaagatttgagtatttatt |
26413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 412895 - 413086
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
412895 |
tctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaaagagtccaacaactctattttctcccttgatcaccaagaca |
412994 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctctaagtgaaaatcatcactacaaaca |
192 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
412995 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaatatctctcaaagtgaaaatcatcactacaaaca |
413086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 124; Significance: 9e-64; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 15810571 - 15810309
Alignment:
| Q |
1 |
tctggctattttaaagaagaaaagagaaatcaattgagactgtggacagctatcaaaaacgtgtccaacagctctattttctcccttgatcaccaagaca |
100 |
Q |
| |
|
|||| ||||||| |||||||||| |||||||||| |||| ||||||||||||||||| |||||||||| |||||||| | || ||||||||||||||| |
|
|
| T |
15810571 |
tctgtctatttttaagaagaaaaatgaaatcaattaggactttggacagctatcaaaaatgtgtccaacaactctatttgcaccattgatcaccaagaca |
15810472 |
T |
|
| Q |
101 |
ctcctcacctataaatacaagggcctttgaaggtcataagcaagagttttgcaagctaata-tctctctaagtgaaaatcatcactacaaacaaagctct |
199 |
Q |
| |
|
||| ||||||||||||||||| | |||||| | | | |||||||||||| ||| |||| |||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
15810471 |
ctcatcacctataaatacaagtggttttgaattttaaaggcaagagttttgaaagaaaatattctctc-aagtgaaaaacatcactacaaacaaagctcc |
15810373 |
T |
|
| Q |
200 |
tcgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgc |
263 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||| ||||| | |||||||| |
|
|
| T |
15810372 |
tcgcaaacaaagcaaatttcaagctctctcactatatctcttgcatcttctctttcgaatttgc |
15810309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 40999455 - 40999361
Alignment:
| Q |
169 |
aagtgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgc |
263 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | |||||||| |
|
|
| T |
40999455 |
aagtgaaaaacatcactacatacaaagctcttcgcaaacaaagtaaattccaagctctctcactatatctcttggatcttctctttcgaatttgc |
40999361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 41000958 - 41000835
Alignment:
| Q |
14 |
aagaagaaaagagaaatcaattgagactgtggacagctatcaaaaa---cgtgtccaacagctctattttctcccttgatcaccaagacactcctcacct |
110 |
Q |
| |
|
||||||||||| |||||||| ||||||| |||||| |||| ||||| ||||||||||| |||||||||| | ||||||||||||| |||||||||||| |
|
|
| T |
41000958 |
aagaagaaaagtgaaatcaaatgagactttggacatctataaaaaaaaacgtgtccaacatctctattttcactcttgatcaccaaggcactcctcacct |
41000859 |
T |
|
| Q |
111 |
ataaatacaagggcctttgaaggt |
134 |
Q |
| |
|
||||||||||| | ||||||||| |
|
|
| T |
41000858 |
ataaatacaagtggttttgaaggt |
41000835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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