View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0202_low_10 (Length: 290)

Name: NF0202_low_10
Description: NF0202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0202_low_10
NF0202_low_10
[»] scaffold0238 (2 HSPs)
scaffold0238 (168-281)||(24528-24647)
scaffold0238 (245-281)||(24471-24507)
[»] chr7 (51 HSPs)
chr7 (168-281)||(48306076-48306195)
chr7 (168-281)||(15974062-15974181)
chr7 (168-281)||(48691773-48691892)
chr7 (168-281)||(46572776-46572895)
chr7 (174-224)||(30430548-30430598)
chr7 (174-224)||(43742303-43742353)
chr7 (177-224)||(32090039-32090086)
chr7 (177-224)||(39007220-39007267)
chr7 (178-224)||(5728734-5728780)
chr7 (174-224)||(6846719-6846769)
chr7 (174-224)||(24360552-24360602)
chr7 (174-224)||(26945654-26945704)
chr7 (174-220)||(41065909-41065955)
chr7 (174-224)||(44426652-44426702)
chr7 (177-224)||(32090082-32090129)
chr7 (177-224)||(48830210-48830257)
chr7 (174-224)||(27334924-27334974)
chr7 (178-224)||(31192500-31192546)
chr7 (174-224)||(31365325-31365375)
chr7 (174-224)||(32091318-32091368)
chr7 (174-224)||(48830386-48830436)
chr7 (183-224)||(25779503-25779544)
chr7 (177-220)||(27334970-27335013)
chr7 (177-224)||(44140501-44140548)
chr7 (185-224)||(46346155-46346194)
chr7 (174-224)||(7843659-7843709)
chr7 (174-224)||(10569746-10569796)
chr7 (174-224)||(32604850-32604900)
chr7 (174-224)||(38837669-38837719)
chr7 (174-224)||(39007174-39007224)
chr7 (174-224)||(45478368-45478418)
chr7 (174-224)||(46024824-46024874)
chr7 (184-224)||(6620673-6620713)
chr7 (177-224)||(34876234-34876281)
chr7 (185-224)||(34876277-34876316)
chr7 (246-281)||(48691904-48691939)
chr7 (174-220)||(5758088-5758134)
chr7 (174-224)||(42773740-42773790)
chr7 (178-224)||(46346105-46346151)
chr7 (183-224)||(32090002-32090043)
chr7 (196-224)||(6846625-6846653)
chr7 (196-224)||(24360419-24360447)
chr7 (196-224)||(25779370-25779398)
chr7 (196-224)||(32604767-32604795)
chr7 (184-224)||(33798508-33798548)
chr7 (184-224)||(34227826-34227866)
chr7 (196-224)||(38837586-38837614)
chr7 (196-224)||(41065814-41065842)
chr7 (196-224)||(44426769-44426797)
chr7 (196-224)||(46004387-46004415)
chr7 (196-224)||(48830253-48830281)
[»] scaffold0338 (2 HSPs)
scaffold0338 (168-281)||(6247-6366)
scaffold0338 (246-281)||(6378-6413)
[»] chr5 (35 HSPs)
chr5 (173-281)||(28069437-28069551)
chr5 (168-281)||(2826226-2826345)
chr5 (168-281)||(34329914-34330033)
chr5 (174-224)||(23155696-23155746)
chr5 (174-224)||(23334930-23334980)
chr5 (174-224)||(11376521-11376571)
chr5 (174-224)||(15059487-15059537)
chr5 (174-224)||(22671850-22671900)
chr5 (177-224)||(8949475-8949522)
chr5 (178-224)||(11660926-11660972)
chr5 (174-224)||(33857483-33857533)
chr5 (174-224)||(39086571-39086621)
chr5 (174-224)||(42746573-42746623)
chr5 (183-224)||(35915889-35915930)
chr5 (184-224)||(23155579-23155619)
chr5 (177-224)||(16668226-16668273)
chr5 (185-224)||(25016468-25016507)
chr5 (177-224)||(33868757-33868804)
chr5 (174-224)||(7286807-7286857)
chr5 (186-224)||(13363568-13363606)
chr5 (174-224)||(20134339-20134389)
chr5 (174-224)||(36864121-36864171)
chr5 (174-224)||(39166280-39166330)
chr5 (178-224)||(39861724-39861770)
chr5 (174-224)||(42746693-42746743)
chr5 (177-224)||(4675543-4675588)
chr5 (177-224)||(703861-703908)
chr5 (185-224)||(4675500-4675539)
chr5 (174-224)||(22830642-22830692)
chr5 (196-224)||(8949518-8949546)
chr5 (196-224)||(16552293-16552321)
chr5 (196-224)||(16668202-16668230)
chr5 (196-224)||(18464735-18464763)
chr5 (196-224)||(22830758-22830786)
chr5 (196-224)||(42512650-42512678)
[»] chr8 (62 HSPs)
chr8 (168-278)||(1209524-1209640)
chr8 (168-281)||(4835866-4835985)
chr8 (168-281)||(4841311-4841430)
chr8 (168-273)||(7058916-7059027)
chr8 (172-281)||(4835723-4835842)
chr8 (172-281)||(4841168-4841287)
chr8 (231-281)||(2750844-2750894)
chr8 (174-224)||(17656672-17656722)
chr8 (231-281)||(2750932-2750982)
chr8 (231-281)||(2751020-2751070)
chr8 (174-224)||(10586001-10586051)
chr8 (174-224)||(23397230-23397280)
chr8 (174-224)||(27506846-27506896)
chr8 (174-224)||(40022595-40022645)
chr8 (174-224)||(40246592-40246642)
chr8 (183-224)||(1672184-1672225)
chr8 (174-222)||(35448290-35448338)
chr8 (177-224)||(185935-185982)
chr8 (177-224)||(13526224-13526271)
chr8 (177-224)||(13615759-13615806)
chr8 (174-224)||(1773229-1773279)
chr8 (174-224)||(6783487-6783537)
chr8 (174-224)||(9853043-9853093)
chr8 (174-224)||(17792832-17792882)
chr8 (174-224)||(18161343-18161393)
chr8 (174-224)||(23504633-23504683)
chr8 (174-224)||(34343303-34343353)
chr8 (174-224)||(35301836-35301886)
chr8 (174-223)||(23940754-23940803)
chr8 (184-224)||(9852846-9852886)
chr8 (177-224)||(18026936-18026983)
chr8 (185-224)||(32644198-32644237)
chr8 (185-220)||(39022768-39022803)
chr8 (174-224)||(2523557-2523607)
chr8 (174-224)||(2541130-2541179)
chr8 (174-224)||(12356138-12356188)
chr8 (178-224)||(13526182-13526228)
chr8 (178-224)||(13615717-13615763)
chr8 (174-224)||(34647378-34647428)
chr8 (174-219)||(8439128-8439173)
chr8 (183-224)||(42434363-42434404)
chr8 (246-281)||(4835672-4835707)
chr8 (246-281)||(4841117-4841152)
chr8 (178-217)||(5106679-5106718)
chr8 (174-229)||(15260078-15260133)
chr8 (177-224)||(23397058-23397105)
chr8 (177-224)||(30652409-30652455)
chr8 (177-224)||(34647557-34647604)
chr8 (177-224)||(40022774-40022821)
chr8 (168-206)||(2751058-2751096)
chr8 (178-224)||(24473189-24473235)
chr8 (177-223)||(30652368-30652413)
chr8 (183-224)||(28698091-28698132)
chr8 (196-224)||(2541045-2541073)
chr8 (196-224)||(9852889-9852917)
chr8 (177-209)||(15809709-15809741)
chr8 (196-224)||(17656788-17656816)
chr8 (184-224)||(30652451-30652491)
chr8 (196-224)||(34647533-34647561)
chr8 (196-224)||(35301991-35302019)
chr8 (196-224)||(39022631-39022659)
chr8 (196-224)||(40022750-40022778)
[»] chr6 (37 HSPs)
chr6 (171-281)||(24736775-24736891)
chr6 (168-281)||(877975-878094)
chr6 (168-281)||(878118-878237)
chr6 (168-281)||(33345532-33345651)
chr6 (177-224)||(16967558-16967605)
chr6 (174-224)||(7765191-7765241)
chr6 (178-224)||(18611951-18611997)
chr6 (174-224)||(22857617-22857667)
chr6 (177-224)||(10588896-10588943)
chr6 (174-224)||(10698717-10698768)
chr6 (177-224)||(15008248-15008295)
chr6 (185-224)||(29157781-29157820)
chr6 (186-224)||(18611775-18611813)
chr6 (174-224)||(19281424-19281474)
chr6 (174-224)||(25119410-25119460)
chr6 (174-224)||(30387140-30387190)
chr6 (183-224)||(15008078-15008119)
chr6 (177-224)||(4102620-4102667)
chr6 (177-224)||(4338215-4338262)
chr6 (177-224)||(22031737-22031784)
chr6 (177-224)||(30909201-30909248)
chr6 (174-224)||(4338126-4338176)
chr6 (174-224)||(7371038-7371088)
chr6 (178-224)||(21384933-21384979)
chr6 (174-224)||(26713114-26713164)
chr6 (174-224)||(27079726-27079776)
chr6 (183-224)||(30909377-30909418)
chr6 (177-224)||(4338172-4338219)
chr6 (177-224)||(28129369-28129416)
chr6 (174-224)||(11140396-11140446)
chr6 (247-281)||(18612184-18612218)
chr6 (178-224)||(29163316-29163362)
chr6 (183-224)||(4102449-4102490)
chr6 (248-281)||(33345487-33345520)
chr6 (196-224)||(18611818-18611846)
chr6 (245-281)||(24736712-24736748)
chr6 (196-224)||(25119152-25119180)
[»] chr2 (53 HSPs)
chr2 (168-281)||(18297377-18297496)
chr2 (168-281)||(4578891-4579009)
chr2 (172-281)||(25193583-25193698)
chr2 (172-281)||(25193714-25193829)
chr2 (170-281)||(14550626-14550743)
chr2 (168-281)||(2264377-2264496)
chr2 (172-269)||(2264258-2264361)
chr2 (172-281)||(4578765-4578879)
chr2 (168-281)||(4579021-4579137)
chr2 (174-224)||(19246716-19246766)
chr2 (174-224)||(31711564-31711614)
chr2 (174-224)||(1095308-1095358)
chr2 (174-224)||(20661535-20661585)
chr2 (178-224)||(20710557-20710603)
chr2 (174-224)||(31783847-31783897)
chr2 (174-224)||(42364546-42364596)
chr2 (184-224)||(34726746-34726786)
chr2 (177-224)||(4281220-4281267)
chr2 (185-224)||(30777477-30777516)
chr2 (185-224)||(37867208-37867247)
chr2 (177-220)||(39548441-39548484)
chr2 (174-224)||(16111567-16111617)
chr2 (174-224)||(36636150-36636200)
chr2 (174-224)||(41345294-41345344)
chr2 (174-224)||(43823470-43823520)
chr2 (177-217)||(13081317-13081357)
chr2 (185-224)||(3147237-3147276)
chr2 (177-224)||(3928218-3928265)
chr2 (177-224)||(28056012-28056059)
chr2 (177-224)||(44341888-44341935)
chr2 (178-224)||(4281044-4281090)
chr2 (178-224)||(12449187-12449233)
chr2 (174-224)||(22588458-22588508)
chr2 (174-224)||(35126633-35126683)
chr2 (178-224)||(41345474-41345520)
chr2 (178-224)||(44915435-44915481)
chr2 (183-224)||(13081280-13081321)
chr2 (183-224)||(39548480-39548521)
chr2 (245-281)||(4578713-4578749)
chr2 (184-224)||(24183547-24183587)
chr2 (246-281)||(2264508-2264543)
chr2 (246-281)||(4280870-4280905)
chr2 (246-281)||(25995910-25995945)
chr2 (177-224)||(28049155-28049202)
chr2 (177-224)||(36636329-36636376)
chr2 (177-224)||(43823293-43823340)
chr2 (246-281)||(43823705-43823740)
chr2 (178-224)||(20193971-20194017)
chr2 (174-224)||(22596444-22596494)
chr2 (184-224)||(16141378-16141418)
chr2 (184-220)||(16141421-16141457)
chr2 (184-224)||(16141464-16141504)
chr2 (196-224)||(20710424-20710452)
[»] chr1 (81 HSPs)
chr1 (168-281)||(23174604-23174723)
chr1 (170-281)||(23174737-23174854)
chr1 (168-281)||(180438-180557)
chr1 (168-281)||(180578-180697)
chr1 (171-224)||(23921142-23921195)
chr1 (168-281)||(11422303-11422422)
chr1 (177-224)||(2741519-2741566)
chr1 (174-224)||(21256047-21256097)
chr1 (177-224)||(28322610-28322657)
chr1 (174-224)||(11354451-11354501)
chr1 (174-224)||(18057583-18057633)
chr1 (174-224)||(18928832-18928882)
chr1 (174-224)||(23319235-23319285)
chr1 (174-224)||(31084189-31084239)
chr1 (174-224)||(32595158-32595208)
chr1 (174-224)||(33157045-33157095)
chr1 (178-224)||(37642904-37642950)
chr1 (174-224)||(45890391-45890441)
chr1 (174-224)||(47693806-47693856)
chr1 (184-224)||(12070560-12070600)
chr1 (177-224)||(30788790-30788837)
chr1 (177-224)||(31084012-31084059)
chr1 (177-224)||(35197599-35197646)
chr1 (174-224)||(1395218-1395268)
chr1 (231-281)||(4097235-4097285)
chr1 (174-224)||(14229301-14229351)
chr1 (174-224)||(17811137-17811187)
chr1 (174-224)||(18952526-18952576)
chr1 (174-224)||(19216611-19216661)
chr1 (174-224)||(20506516-20506566)
chr1 (174-224)||(28322564-28322614)
chr1 (174-224)||(29945271-29945321)
chr1 (174-224)||(31763829-31763879)
chr1 (174-224)||(35197420-35197470)
chr1 (174-224)||(44261132-44261182)
chr1 (183-224)||(9628548-9628589)
chr1 (183-227)||(2741559-2741603)
chr1 (184-224)||(16116479-16116519)
chr1 (174-222)||(30802979-30803027)
chr1 (184-224)||(33097822-33097862)
chr1 (184-224)||(51420868-51420908)
chr1 (177-224)||(19216568-19216615)
chr1 (177-224)||(23921323-23921370)
chr1 (177-224)||(31528998-31529045)
chr1 (177-224)||(51801051-51801098)
chr1 (174-224)||(14389898-14389948)
chr1 (174-224)||(16116655-16116705)
chr1 (174-224)||(17893213-17893263)
chr1 (174-224)||(35754623-35754673)
chr1 (174-224)||(44687778-44687828)
chr1 (178-224)||(45849253-45849299)
chr1 (183-224)||(31528961-31529002)
chr1 (183-224)||(51801014-51801055)
chr1 (245-280)||(180710-180745)
chr1 (246-281)||(8401562-8401597)
chr1 (177-224)||(19850661-19850708)
chr1 (246-281)||(23921092-23921127)
chr1 (246-281)||(34370392-34370427)
chr1 (246-281)||(35197202-35197237)
chr1 (177-224)||(44261089-44261136)
chr1 (177-224)||(44687867-44687914)
chr1 (177-224)||(51420911-51420958)
chr1 (178-224)||(6708371-6708417)
chr1 (178-224)||(9040995-9041041)
chr1 (178-224)||(10498040-10498086)
chr1 (174-224)||(12796483-12796533)
chr1 (178-224)||(32143712-32143758)
chr1 (178-224)||(51904826-51904872)
chr1 (177-224)||(10497866-10497911)
chr1 (196-224)||(10497907-10497935)
chr1 (196-224)||(14390014-14390042)
chr1 (196-224)||(16116522-16116550)
chr1 (196-224)||(17893118-17893146)
chr1 (196-224)||(21256201-21256229)
chr1 (196-224)||(23277328-23277356)
chr1 (196-224)||(23921299-23921327)
chr1 (196-224)||(24368586-24368614)
chr1 (196-224)||(31084055-31084083)
chr1 (196-224)||(35754738-35754766)
chr1 (196-224)||(37642772-37642800)
chr1 (196-224)||(45849154-45849182)
[»] chr3 (52 HSPs)
chr3 (168-281)||(19384583-19384701)
chr3 (168-281)||(52986695-52986814)
chr3 (168-281)||(52986826-52986945)
chr3 (168-281)||(31852905-31853024)
chr3 (172-281)||(50754784-50754899)
chr3 (172-281)||(50754915-50755030)
chr3 (168-281)||(51361715-51361834)
chr3 (231-281)||(7044637-7044687)
chr3 (177-224)||(23755885-23755932)
chr3 (174-224)||(8718901-8718951)
chr3 (174-224)||(9070788-9070838)
chr3 (174-224)||(16653550-16653600)
chr3 (174-224)||(19012445-19012495)
chr3 (174-224)||(27446153-27446203)
chr3 (174-224)||(47728957-47729007)
chr3 (174-224)||(47924306-47924356)
chr3 (174-224)||(51681419-51681469)
chr3 (174-223)||(12974131-12974180)
chr3 (183-224)||(53595444-53595485)
chr3 (184-224)||(16276909-16276949)
chr3 (177-224)||(28299512-28299559)
chr3 (174-224)||(23756061-23756111)
chr3 (174-224)||(41191616-41191666)
chr3 (184-224)||(49053376-49053416)
chr3 (177-224)||(23699877-23699924)
chr3 (177-224)||(23718332-23718379)
chr3 (177-224)||(23736788-23736835)
chr3 (177-224)||(28299555-28299602)
chr3 (177-224)||(39194554-39194601)
chr3 (177-224)||(41191796-41191843)
chr3 (174-224)||(8036929-8036979)
chr3 (178-224)||(28299470-28299516)
chr3 (178-224)||(34562610-34562656)
chr3 (178-224)||(36185849-36185895)
chr3 (177-217)||(53595494-53595534)
chr3 (246-281)||(7044511-7044546)
chr3 (246-281)||(19384536-19384571)
chr3 (177-220)||(34562787-34562830)
chr3 (246-281)||(50755046-50755081)
chr3 (246-281)||(51361668-51361703)
chr3 (174-224)||(9643038-9643088)
chr3 (174-224)||(14743597-14743647)
chr3 (174-224)||(38345334-38345384)
chr3 (174-224)||(51846214-51846264)
chr3 (246-280)||(52986636-52986670)
chr3 (191-224)||(9183781-9183814)
chr3 (183-224)||(53595530-53595571)
chr3 (196-224)||(19012532-19012560)
chr3 (196-224)||(23755928-23755956)
chr3 (196-224)||(34562763-34562791)
chr3 (196-224)||(35221594-35221622)
chr3 (196-224)||(36185772-36185800)
[»] chr4 (72 HSPs)
chr4 (168-281)||(38245646-38245765)
chr4 (168-281)||(10473241-10473359)
chr4 (168-281)||(10473371-10473490)
chr4 (168-281)||(45256611-45256730)
chr4 (168-281)||(638717-638836)
chr4 (172-224)||(50644490-50644542)
chr4 (174-224)||(12722878-12722928)
chr4 (174-224)||(17109859-17109909)
chr4 (174-224)||(21995724-21995774)
chr4 (168-259)||(26577458-26577554)
chr4 (174-224)||(54895458-54895508)
chr4 (174-224)||(6385733-6385783)
chr4 (174-224)||(8157229-8157279)
chr4 (174-224)||(9553068-9553118)
chr4 (174-224)||(25573595-25573645)
chr4 (174-224)||(27765053-27765103)
chr4 (174-224)||(31763048-31763098)
chr4 (178-224)||(36924295-36924341)
chr4 (174-224)||(50562891-50562941)
chr4 (177-224)||(6385779-6385826)
chr4 (185-224)||(8166029-8166068)
chr4 (177-224)||(29826090-29826137)
chr4 (174-224)||(2124485-2124535)
chr4 (174-224)||(10374097-10374147)
chr4 (178-224)||(16474964-16475010)
chr4 (174-224)||(18924051-18924101)
chr4 (174-224)||(21097906-21097956)
chr4 (178-220)||(30358628-30358670)
chr4 (174-224)||(37059855-37059905)
chr4 (174-224)||(43374501-43374551)
chr4 (183-224)||(22180434-22180475)
chr4 (183-224)||(29825920-29825961)
chr4 (183-224)||(49137344-49137385)
chr4 (177-221)||(25573641-25573685)
chr4 (184-224)||(43852161-43852201)
chr4 (184-224)||(48077323-48077363)
chr4 (177-224)||(1729007-1729054)
chr4 (174-217)||(4169200-4169243)
chr4 (185-224)||(8165913-8165952)
chr4 (177-224)||(38010504-38010551)
chr4 (178-224)||(1492726-1492772)
chr4 (174-224)||(6841960-6842010)
chr4 (243-281)||(9551769-9551807)
chr4 (178-224)||(36309470-36309516)
chr4 (183-220)||(16299386-16299423)
chr4 (183-224)||(25573690-25573731)
chr4 (184-224)||(16299339-16299379)
chr4 (184-224)||(33883433-33883473)
chr4 (177-221)||(49137513-49137557)
chr4 (246-281)||(638848-638883)
chr4 (185-224)||(6768457-6768496)
chr4 (246-281)||(10473502-10473537)
chr4 (185-224)||(20862336-20862375)
chr4 (246-281)||(51836475-51836510)
chr4 (193-223)||(9552196-9552226)
chr4 (178-224)||(9967814-9967860)
chr4 (178-224)||(24687037-24687083)
chr4 (174-224)||(27872939-27872989)
chr4 (186-224)||(30358413-30358451)
chr4 (178-224)||(36621182-36621228)
chr4 (178-224)||(47567950-47567996)
chr4 (178-224)||(52325158-52325203)
chr4 (196-224)||(4169060-4169088)
chr4 (196-224)||(12722784-12722812)
chr4 (196-224)||(21097774-21097802)
chr4 (196-224)||(22180580-22180608)
chr4 (196-224)||(27764922-27764950)
chr4 (196-224)||(29826066-29826094)
chr4 (196-224)||(38010547-38010575)
chr4 (184-224)||(42788625-42788665)
chr4 (196-224)||(50644356-50644384)
chr4 (196-224)||(53865213-53865241)
[»] scaffold0194 (1 HSPs)
scaffold0194 (174-224)||(28439-28489)
[»] scaffold0097 (2 HSPs)
scaffold0097 (178-224)||(14396-14442)
scaffold0097 (196-224)||(14263-14291)
[»] scaffold0249 (1 HSPs)
scaffold0249 (185-224)||(23684-23723)
[»] scaffold0019 (1 HSPs)
scaffold0019 (174-224)||(72567-72617)
[»] scaffold0009 (2 HSPs)
scaffold0009 (174-224)||(203132-203182)
scaffold0009 (196-224)||(203288-203316)
[»] scaffold0004 (1 HSPs)
scaffold0004 (174-224)||(96053-96103)
[»] scaffold0291 (1 HSPs)
scaffold0291 (174-224)||(9650-9700)
[»] scaffold0126 (1 HSPs)
scaffold0126 (174-224)||(37687-37737)
[»] scaffold0129 (1 HSPs)
scaffold0129 (178-223)||(20064-20109)
[»] scaffold0455 (1 HSPs)
scaffold0455 (177-224)||(7956-8003)
[»] scaffold0102 (1 HSPs)
scaffold0102 (174-224)||(33670-33720)
[»] scaffold0664 (1 HSPs)
scaffold0664 (196-224)||(3124-3152)
[»] scaffold0534 (1 HSPs)
scaffold0534 (176-224)||(9962-10010)
[»] scaffold0516 (1 HSPs)
scaffold0516 (196-224)||(1218-1246)


Alignment Details
Target: scaffold0238 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 24528 - 24647
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  24528 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 24627  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  24628 catcaacaccgtcgttcatc 24647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 24471 - 24507
Alignment:
Q  245 agaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  24471 agaatcttcaatctcatcatcaacgccgtcgttcatc 24507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 48306195 - 48306076
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  48306195 accggaatgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 48306096  T
Q  262 tatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||    
T  48306095 tatcaacaccgtcgttcatc 48306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 15974062 - 15974181
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||       | |||||||||||||||||||||||||||||||    
T  15974062 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaatccattttgctgtggaaatggtttccagaatcttcaatctcat 15974161  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  15974162 catcaacaccgtcgttcatc 15974181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 48691892 - 48691773
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt------atggaaatggtttccagaatcttcaatctcat 261  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||  |      ||||||||||||||||||||||||||||||||    
T  48691892 accggaatgtcaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaacctattttgctatggaaatggtttccagaatcttcaatctcat 48691793  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  48691792 catcaacaccgtcgttcatc 48691773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 46572776 - 46572895
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  46572776 accggaatgccaaaaccattttgttgtggaaatggtttctatgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 46572875  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     ||||||| |||||||||||    
T  46572876 catcaacatcgtcgttcatc 46572895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 30430598 - 30430548
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30430598 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 30430548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 43742353 - 43742303
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43742353 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 43742303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 32090039 - 32090086
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32090039 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 32090086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 39007220 - 39007267
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39007220 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 39007267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 5728780 - 5728734
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  5728780 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 5728734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 6846719 - 6846769
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  6846719 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 6846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 24360602 - 24360552
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  24360602 atgccaaaaccattttgatgtggaaatggtttctgtgagttgtactccaaa 24360552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 26945654 - 26945704
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  26945654 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 26945704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 41065909 - 41065955
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  41065909 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 41065955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 44426702 - 44426652
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  44426702 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 44426652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 32090082 - 32090129
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  32090082 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 32090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 48830257 - 48830210
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  48830257 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 27334924 - 27334974
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  27334924 atgccaaaatcattttgctgtggaaatggtttctgtgagttggactccaaa 27334974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 31192500 - 31192546
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  31192500 caaaaccattttgctgtggaaatggtttctgtgaattgtactccaaa 31192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 31365375 - 31365325
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  31365375 atgccaaaaccattttgctgtggaaatggtttatgtgacttgtactccaaa 31365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 32091368 - 32091318
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  32091368 atgccaaaaacattttgctgtggaaatagtttctgtgagttgtactccaaa 32091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 48830436 - 48830386
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  48830436 atgccaaaaccattttgatgtggaaatagtttctgtgagttgtactccaaa 48830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 25779544 - 25779503
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  25779544 ccattttgctgtggaaatggtttctatgagttgtactccaaa 25779503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 27334970 - 27335013
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||    
T  27334970 ccaaaaccattttgctgtggaaatggtttctgtgaattgtactc 27335013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 44140501 - 44140548
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  44140501 ccaaaaccattttgctgtggaaatagtttttgtgagttgtactccaaa 44140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 46346155 - 46346194
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  46346155 attttgctgtgaaaatggtttctgtgagttgtactccaaa 46346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 7843659 - 7843709
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  7843659 atgccaaaaccattttgctgtgaaaataatttctgtgagttgtactccaaa 7843709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 10569796 - 10569746
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  10569796 atgccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 10569746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 32604850 - 32604900
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||| |||||||||||||||||| || |||||||||    
T  32604850 atgccaaaaccattttgctttggaaatggtttctgtgaattatactccaaa 32604900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 38837669 - 38837719
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||| |||||||||||||||||| || |||||||||    
T  38837669 atgccaaaaccattttgctttggaaatggtttctgtgaattatactccaaa 38837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 39007174 - 39007224
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||  |||||||||||| ||||||||||||||||||    
T  39007174 atgccaaaaccattttgcaatggaaatggtttatgtgagttgtactccaaa 39007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 45478418 - 45478368
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||| ||||    
T  45478418 atgccaaaactattttgctgtgaaaatggtttctgtgagttgtacttcaaa 45478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 46024874 - 46024824
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  46024874 atgccaaaatcattttgctgtggaaatgatttttgtgagttgtactccaaa 46024824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 6620713 - 6620673
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  6620713 cattttgctgtggaaatggtttctgtgtgttgtaccccaaa 6620673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 34876281 - 34876234
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  34876281 ccaaaaccatttttcaatggaaatggtttctgtgagttgtactccaaa 34876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 34876316 - 34876277
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  34876316 attttgcagtggaaatggtttctgtgagttggactccaaa 34876277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 48691939 - 48691904
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  48691939 gaatcttcaatctcatcatcaacaccgtcgttcatc 48691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 5758134 - 5758088
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||||||  ||||||||||||||||||||||| | |||||||||||    
T  5758134 atgccaaaatcattttgctgtggaaatggtttcagggagttgtactc 5758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 42773740 - 42773790
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||| |||||||||||||||||  |||||||||| ||||||    
T  42773740 atgccaaaaccattgtgctgtggaaatggttttggtgagttgtaatccaaa 42773790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 46346105 - 46346151
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||| |||||||||||||||||| |||| ||||||||    
T  46346105 caaaaccattttgcagtggaaatggtttctgtgggttggactccaaa 46346151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 32090002 - 32090043
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||    
T  32090002 ccattttgcagtggaaatgatttctgtgagttggactccaaa 32090043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 6846625 - 6846653
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  6846625 gaaatggtttctgtgagttgtactccaaa 6846653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 24360447 - 24360419
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  24360447 gaaatggtttctgtgagttgtactccaaa 24360419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 25779398 - 25779370
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  25779398 gaaatggtttctgtgagttgtactccaaa 25779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 32604767 - 32604795
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  32604767 gaaatggtttctgtgagttgtactccaaa 32604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 33798548 - 33798508
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  33798548 cattttgctgtggaaatgatttatgtgagttgtattccaaa 33798508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 34227826 - 34227866
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||| |||| ||||||||| ||||||||||||||||||    
T  34227826 cattttgttgtgaaaatggtttgtgtgagttgtactccaaa 34227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 38837586 - 38837614
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  38837586 gaaatggtttctgtgagttgtactccaaa 38837614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 41065814 - 41065842
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  41065814 gaaatggtttctgtgagttgtactccaaa 41065842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 44426797 - 44426769
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  44426797 gaaatggtttctgtgagttgtactccaaa 44426769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 46004387 - 46004415
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  46004387 gaaatggtttctgtgagttgtactccaaa 46004415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 48830281 - 48830253
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  48830281 gaaatggtttctgtgagttgtactccaaa 48830253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 6366 - 6247
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||    
T  6366 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatttcat 6267  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  6266 catcaacaccgtcgttcatc 6247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 6413 - 6378
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  6413 gaatcttcaatctcatcatcaacaccgtcgttcatc 6378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 28069437 - 28069551
Alignment:
Q  173 aatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatca 266  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| ||||    
T  28069437 aatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcatcatca 28069536  T
Q  267 acaccgtcgttcatc 281  Q
    |||||||||||||||    
T  28069537 acaccgtcgttcatc 28069551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 2826226 - 2826345
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||       | |||||||||||||||||||||||||| ||||    
T  2826226 accggaatgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaatccattttgctgtggaaatggtttccagaatcttcaatatcat 2826325  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  2826326 catcaacaccgtcgttcatc 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 34330033 - 34329914
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  34330033 accggaatgccaaaaccattttgctgtggaaataatttttgtgagttgtactccaaacccattttactgtggaaatggtttccagaatcttcaatctcat 34329934  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  34329933 catcaacaccgtcgttcatc 34329914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 23155746 - 23155696
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23155746 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23155696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 23334930 - 23334980
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23334930 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23334980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 11376521 - 11376571
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11376521 atgccaaaaccattttgctgtggaaatggtttctgtgagttgttctccaaa 11376571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 15059537 - 15059487
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15059537 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 15059487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 22671900 - 22671850
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  22671900 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 22671850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 8949522 - 8949475
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  8949522 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 8949475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 11660926 - 11660972
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  11660926 caaaaccattttgctgtggaaatggtttctgtgagttgtattccaaa 11660972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 33857483 - 33857533
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  33857483 atgccaaaaccattttgttgtggaaatggtttctgtgaattgtactccaaa 33857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 39086621 - 39086571
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  39086621 atgccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 39086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 42746623 - 42746573
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  42746623 atgccaaaaccattttgctgtggaaatagtttatgtgagttgtactccaaa 42746573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 35915930 - 35915889
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  35915930 ccattttgcagtggaaatggtttctgtgagttgtactccaaa 35915889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 23155619 - 23155579
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  23155619 cattttgctgtgaaaatggtttctgtgagttgtactccaaa 23155579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 16668226 - 16668273
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  16668226 ccaaaaccattttgctgaggaaatggtttttgtgagttgtactccaaa 16668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 25016468 - 25016507
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  25016468 attttgctgtggaaatggtttctgtgagttatactccaaa 25016507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 33868804 - 33868757
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  33868804 ccaaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 33868757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 7286857 - 7286807
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | |||||||| ||||||||||||||||| |||||||||||||    
T  7286857 atgccaaaactattttgctatggaaatggtttctgtgtgttgtactccaaa 7286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 13363606 - 13363568
Alignment:
Q  186 ttttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  13363606 ttttgctgtggaaatggtttctgtgaattgtactccaaa 13363568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 20134339 - 20134389
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||| | ||||||||||||||||||| ||| ||||||||||||||||||    
T  20134339 atgccagaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 20134389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 36864171 - 36864121
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | |||||||||||||||| |||||||||||||||| ||||||    
T  36864171 atgccaaaactattttgctgtggaaatagtttctgtgagttgtattccaaa 36864121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 39166280 - 39166330
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| |||||||||| ||||||||||||||||||||| |||||||||    
T  39166280 atgctaaaaccattttgctatggaaatggtttctgtgagttatactccaaa 39166330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 39861724 - 39861770
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  39861724 caaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 39861770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 42746743 - 42746693
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| |||||||||||||||||| |||| ||||||||||||||||||    
T  42746743 atgctaaaaccattttgctgtggaaatagtttatgtgagttgtactccaaa 42746693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 4675588 - 4675543
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  4675588 ccaaaaccattttgctgtggaaatggtt--tgtgagttgtactccaaa 4675543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 703861 - 703908
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||| ||||||||||||||| ||||||||||| ||||||    
T  703861 ccaaaaccattttactgtggaaatggtttttgtgagttgtattccaaa 703908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 4675539 - 4675500
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  4675539 attttgttgtggaaatggtttatgtgagttgtactccaaa 4675500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 22830692 - 22830642
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||  |||||||||||||| ||||||||||||||||||    
T  22830692 atgccaaaatcatttttttgtggaaatggtttatgtgagttgtactccaaa 22830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 8949546 - 8949518
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  8949546 gaaatggtttctgtgagttgtactccaaa 8949518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 16552293 - 16552321
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  16552293 gaaatggtttctgtgagttgtactccaaa 16552321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 16668202 - 16668230
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  16668202 gaaatggtttctgtgagttgtactccaaa 16668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 18464735 - 18464763
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  18464735 gaaatggtttctgtgagttgtactccaaa 18464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 22830786 - 22830758
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  22830786 gaaatggtttctgtgagttgtactccaaa 22830758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 42512678 - 42512650
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  42512678 gaaatggtttctgtgagttgtactccaaa 42512650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 1209640 - 1209524
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  1209640 accggaatgccaaaaccattttgctgtggaaatgatttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 1209541  T
Q  262 tatcaacaccgtcgttc 278  Q
     ||||||||||||||||    
T  1209540 catcaacaccgtcgttc 1209524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4835866 - 4835985
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| |       | ||||||||||||||| |||||||||||||||    
T  4835866 accggaatgccaaaaccatttttctgtggaaatggtttctatgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctcat 4835965  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  4835966 catcaacaccgtcgttcatc 4835985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4841311 - 4841430
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| |       | ||||||||||||||| |||||||||||||||    
T  4841311 accggaatgccaaaaccatttttctgtggaaatggtttctatgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctcat 4841410  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  4841411 catcaacaccgtcgttcatc 4841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 168 - 273
Target Start/End: Complemental strand, 7059027 - 7058916
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||| |||||||    
T  7059027 accggaatgtcaaaaccattttgctatggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttctatctcat 7058928  T
Q  262 tatcaacaccgt 273  Q
     |||| ||||||    
T  7058927 catcatcaccgt 7058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 4835723 - 4835842
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctg----tgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||| ||||||| ||||||||||||||| ||    ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4835723 gaatgccaaaaccatttttctgtggaaatggtttatgcatgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4835822  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  4835823 catcaacaccgtcgttcatc 4835842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 4841168 - 4841287
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctg----tgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||| ||||||| ||||||||||||||| ||    ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4841168 gaatgccaaaaccatttttctgtggaaatggtttatgcatgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4841267  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  4841268 catcaacaccgtcgttcatc 4841287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 2750894 - 2750844
Alignment:
Q  231 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2750894 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtcgttcatc 2750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 17656722 - 17656672
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17656722 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 17656672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 2750982 - 2750932
Alignment:
Q  231 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2750982 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtagttcatc 2750932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 2751070 - 2751020
Alignment:
Q  231 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2751070 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtagttcatc 2751020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 10586001 - 10586051
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  10586001 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 10586051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 23397280 - 23397230
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  23397280 atgccaaaaccattttgatgtggaaatggtttctgtgagttgtactccaaa 23397230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 27506846 - 27506896
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  27506846 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 27506896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 40022595 - 40022645
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  40022595 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 40022645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 40246592 - 40246642
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40246592 atgccaaaaccattttgcagtggaaatggtttctgtgagttgtactccaaa 40246642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 1672225 - 1672184
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1672225 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 1672184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 35448338 - 35448290
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactcca 222  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  35448338 atgccaaaaccattttgctgtggaaatgatttctgtgagttgtactcca 35448290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 185982 - 185935
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  185982 ccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 185935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 13526224 - 13526271
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13526224 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 13526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 13615759 - 13615806
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13615759 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 13615806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 1773229 - 1773279
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  1773229 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 1773279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 6783537 - 6783487
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  6783537 atgccaaaaccattttgctgtgaaaatagtttctgtgagttgtactccaaa 6783487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 9853093 - 9853043
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  9853093 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 9853043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 17792832 - 17792882
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  17792832 atgccaaaaccattttgctgtgtaaatgatttctgtgagttgtactccaaa 17792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 18161393 - 18161343
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  18161393 atgccaaaaccattttactgtggaaatggtttctgtgatttgtactccaaa 18161343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 23504633 - 23504683
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  23504633 atgccaaaaccattttgctgtgaaaatggattctgtgagttgtactccaaa 23504683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 34343353 - 34343303
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  34343353 atgccaaaaccattttgctgtggaaatggtttttgtgagttgtacttcaaa 34343303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 35301836 - 35301886
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  35301836 atgctaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 35301886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 23940754 - 23940803
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaa 223  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  23940754 atgccaaaaccattttgctgtgaaaatggtttctatgagttgtactccaa 23940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 9852886 - 9852846
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  9852886 cattttgctgtggaaatggtttctgtgtgttgtactccaaa 9852846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 18026983 - 18026936
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  18026983 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 18026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 32644198 - 32644237
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  32644198 attttgctgtggaaatgatttctgtgagttgtactccaaa 32644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 39022803 - 39022768
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||||||||||||||||||||||||||||||||||    
T  39022803 attttgctgtggaaatggtttctgtgagttgtactc 39022768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 2523607 - 2523557
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||  ||||||||||||| ||||||||||||||||||    
T  2523607 atgccaaaaccattttggagtggaaatggtttatgtgagttgtactccaaa 2523557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 2541130 - 2541179
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  2541130 atgccaaaaccattttactgtggaaa-ggtttctgtgagttgtactccaaa 2541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 12356188 - 12356138
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||| ||||||||||||||||||| ||||||||    
T  12356188 atgccaaaaccattttgcagtgaaaatggtttctgtgagttggactccaaa 12356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 13526182 - 13526228
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  13526182 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 13526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 13615717 - 13615763
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  13615717 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 13615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 34647378 - 34647428
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||||    
T  34647378 atgccaaaatcattttgctgtggaaatggtttatgtaagttgtactccaaa 34647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 8439128 - 8439173
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtact 219  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||    
T  8439128 atgccaaaaccattttgctgtggaaatgatttatgtgagttgtact 8439173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 42434404 - 42434363
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  42434404 ccattttgttgtggaaatggtttatgtgagttgtactccaaa 42434363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 4835672 - 4835707
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  4835672 gaatcttcaatctcatcatcaacaccgtcgttcatc 4835707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 4841117 - 4841152
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  4841117 gaatcttcaatctcatcatcaacaccgtcgttcatc 4841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 5106679 - 5106718
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgta 217  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  5106679 caaaaccattttgctgtggaaatggtttttgtgagttgta 5106718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 15260078 - 15260133
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt 229  Q
    |||| ||| ||||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  15260078 atgctaaaaccattttgctgtgaaaatggtttatgtgagttgtaatccaaaaccgt 15260133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23397105 - 23397058
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||| || |||||||||||||    
T  23397105 ccaaaaccattttgctgtgaaaatggtttctatgtgttgtactccaaa 23397058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30652455 - 30652409
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  30652455 ccaaaaccattttgc-gtggaaatggtttctgtgtgttgtactccaaa 30652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 34647557 - 34647604
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||  || |||||||||    
T  34647557 ccaaaaccattttgctgtggaaatggtttctgtgtattatactccaaa 34647604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 40022774 - 40022821
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| |||||||| |||||||| ||||    
T  40022774 ccaaaaccattttgctgtggaaatgatttctgtgtgttgtacttcaaa 40022821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 2751096 - 2751058
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttc 206  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  2751096 accggaatgctaaaaccattttgctgtggaaatggtttc 2751058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 24473189 - 24473235
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| |||||||| |||||||||||||  ||||||||||||||||||    
T  24473189 caaaaccattttgatgtggaaatggttgttgtgagttgtactccaaa 24473235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 30652413 - 30652368
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaa 223  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  30652413 ccaaaaccattttgatgtggaaatggtttctgtgag-tgtactccaa 30652368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 28698091 - 28698132
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||||||||||||||||||| ||||||||    
T  28698091 ccattttgtagtggaaatggtttctgtgagttggactccaaa 28698132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 2541045 - 2541073
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  2541045 gaaatggtttctgtgagttgtactccaaa 2541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 9852917 - 9852889
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  9852917 gaaatggtttctgtgagttgtactccaaa 9852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 15809741 - 15809709
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  15809741 ccaaaaccattttgctgtggaaatggtttctgt 15809709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 17656816 - 17656788
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  17656816 gaaatggtttctgtgagttgtactccaaa 17656788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 30652491 - 30652451
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||| ||||||||    
T  30652491 cattttgcagtggaaatgatttctgtgagttggactccaaa 30652451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 34647533 - 34647561
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  34647533 gaaatggtttctgtgagttgtactccaaa 34647561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 35301991 - 35302019
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  35301991 gaaatggtttctgtgagttgtactccaaa 35302019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 39022659 - 39022631
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  39022659 gaaatggtttctgtgagttgtactccaaa 39022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 40022750 - 40022778
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  40022750 gaaatggtttctgtgagttgtactccaaa 40022778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 24736775 - 24736891
Alignment:
Q  171 ggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattat 264  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| ||    
T  24736775 ggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcatcat 24736874  T
Q  265 caacaccgtcgttcatc 281  Q
    |||||||||||||||||    
T  24736875 caacaccgtcgttcatc 24736891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 878094 - 877975
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||| ||||    
T  878094 accggaatgccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatttcat 877995  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  877994 catcaacaccgtcgttcatc 877975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 878237 - 878118
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    ||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  878237 accggaatgtcaaaaccattttgttgtgaaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 878138  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  878137 catcaacaccgtcgttcatc 878118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 33345532 - 33345651
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||    
T  33345532 accggaatgccaaaaccatttatctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccataatcttcaatctcat 33345631  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  33345632 catcaacaccgtcgttcatc 33345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 16967558 - 16967605
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16967558 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 16967605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 7765241 - 7765191
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  7765241 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 7765191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 18611997 - 18611951
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  18611997 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 18611951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 22857617 - 22857667
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  22857617 atgccaaaaccattttactgtggaaatggtttctgtgagttgtactccaaa 22857667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 10588896 - 10588943
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10588896 ccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 10588943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 10698717 - 10698768
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagtt-gtactccaaa 224  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  10698717 atgccaaaaccattttgctgtggaaatggtttctgtgagttagtactccaaa 10698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 15008248 - 15008295
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15008248 ccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 15008295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 29157820 - 29157781
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29157820 attttgctgtggaaatggtttctgtgagttgtactccaaa 29157781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 18611813 - 18611775
Alignment:
Q  186 ttttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18611813 ttttgctgtggaaatggtttctgtgagttgtactccaaa 18611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 19281424 - 19281474
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  19281424 atgccaaaaccattttgctgtgaaaatagtttctgtgagttgtactccaaa 19281474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 25119410 - 25119460
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  25119410 atgccaaaaccattttgctgtgtaaatggtttctgtcagttgtactccaaa 25119460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 30387140 - 30387190
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  30387140 atgccaaaatcattttgctgtagaaatggtttctgtgagttgtactccaaa 30387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 15008078 - 15008119
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  15008078 ccattttgctgtggaaatggtttctgtgagctgtactccaaa 15008119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4102620 - 4102667
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  4102620 ccaaaaccattttgctgtggaaatggtttatgtgagttgtacttcaaa 4102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4338215 - 4338262
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  4338215 ccaaaaccattttgctgtggaaatgatttctatgagttgtactccaaa 4338262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 22031737 - 22031784
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  22031737 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 22031784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30909248 - 30909201
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  30909248 ccaaaaccattttgctatggaaatggtttctgtgtgttgtactccaaa 30909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 4338126 - 4338176
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||| ||||||||| ||||||||    
T  4338126 atgccaaaaccattttgcagtggaaatggtttttgtgagttggactccaaa 4338176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 7371038 - 7371088
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | |||||||| | |||||||||||||||||||||||||||||    
T  7371038 atgccaaaactattttgctttagaaatggtttctgtgagttgtactccaaa 7371088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 21384933 - 21384979
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||    
T  21384933 caaaaccattttgctatgaaaatggtttctgtgagttgtactccaaa 21384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 26713114 - 26713164
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| ||||||||||||||||| ||| |||||||||||    
T  26713114 atgccaaaaccattttgatgtggaaatggtttctgggagctgtactccaaa 26713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 27079726 - 27079776
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| |||||||| |||||||||| ||||||||||||||||||||||    
T  27079726 atgcaaaaaccattttgttgtggaaatgatttctgtgagttgtactccaaa 27079776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 30909418 - 30909377
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  30909418 ccattttgccttggaaatggtttctgtgagttgtactccaaa 30909377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4338172 - 4338219
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||| ||||||||||||||||| ||||| ||||||||    
T  4338172 ccaaaaccattttgcagtggaaatggtttctgttagttggactccaaa 4338219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 28129416 - 28129369
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  28129416 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 28129369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 11140396 - 11140446
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| |||||||| |||||||||  ||||||||||||||||||||||    
T  11140396 atgcaaaaaccattttgttgtggaaataatttctgtgagttgtactccaaa 11140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 281
Target Start/End: Complemental strand, 18612218 - 18612184
Alignment:
Q  247 aatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||| |||||||||||||||||||    
T  18612218 aatcttcaatctcatcatcaacaccgtcgttcatc 18612184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 29163362 - 29163316
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||||||||    
T  29163362 caaaaccattttgctgtggaaatgatttatgtgaattgtactccaaa 29163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 4102449 - 4102490
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| |||||||||||||||||||  |||||||||||    
T  4102449 ccattttgcagtggaaatggtttctgtgaactgtactccaaa 4102490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 33345487 - 33345520
Alignment:
Q  248 atcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||||| ||||||||||    
T  33345487 atcttcaatctcattatcaacactgtcgttcatc 33345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 18611846 - 18611818
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  18611846 gaaatggtttctgtgagttgtactccaaa 18611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 24736712 - 24736748
Alignment:
Q  245 agaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  24736712 agaatcttcaatctcatcatcaacactgtcgttcatc 24736748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 25119152 - 25119180
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  25119152 gaaatggtttctgtgagttgtactccaaa 25119180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 18297377 - 18297496
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  18297377 accggaatgtcaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 18297476  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  18297477 catcaacaccgtcgttcatc 18297496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4578891 - 4579009
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4578891 accggaatgccaaaaccattttgctgtggaa-tggtttttgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4578989  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  4578990 catcaacaccgtcgttcatc 4579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 25193698 - 25193583
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtatgg------aaatggtttccagaatcttcaatctcattatc 265  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||||||||| | | |      |||||||||||||||||||||||||||| |||    
T  25193698 gaatgccaaaaccattttgctttgaaaatggtttctgtgagttgtactccaaacccattttgctgtgtaaatggtttccagaatcttcaatctcatcatc 25193599  T
Q  266 aacaccgtcgttcatc 281  Q
    ||||||||||||||||    
T  25193598 aacaccgtcgttcatc 25193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 25193829 - 25193714
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtatgg------aaatggtttccagaatcttcaatctcattatc 265  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||||||||| | | |      |||||||||||||||||||||||||||| |||    
T  25193829 gaatgccaaaaccattttgctttgaaaatggtttctgtgagttgtactccaaacccattttgctgtgtaaatggtttccagaatcttcaatctcatcatc 25193730  T
Q  266 aacaccgtcgttcatc 281  Q
    ||||||||||||||||    
T  25193729 aacaccgtcgttcatc 25193714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 14550626 - 14550743
Alignment:
Q  170 cggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcatta 263  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||       | ||||||||||||||||||| ||||||||||| |    
T  14550626 cggaatgccaaaaccattttgctgtggaaatgatttatgtgagttgtactccaaacccattttgctgtggaaatggtttccagaattttcaatctcatca 14550725  T
Q  264 tcaacaccgtcgttcatc 281  Q
    ||||||||||| ||||||    
T  14550726 tcaacaccgtcattcatc 14550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 2264496 - 2264377
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||| |       | ||||||||||||||| |||||||||||||||    
T  2264496 accggaatgccaaaaccattttgttgtggaaatgatttttgtgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctcat 2264397  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||| ||||||||||    
T  2264396 catcaacactgtcgttcatc 2264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 2264361 - 2264258
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacc------cgtatggaaatggtttccagaatcttcaatctcattatc 265  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||| ||||||||||||||||| |||    
T  2264361 gaatgccaaaaccattttgctgtagaaatggtttctgtgagttgtactccaaaccaattttgttgtggaaatggtttctagaatcttcaatctcatcatc 2264262  T
Q  266 aaca 269  Q
    ||||    
T  2264261 aaca 2264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 4578765 - 4578879
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatc 265  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||       | |||||||| ||| |||||| ||||||||||| |||    
T  4578765 gaatgccaaaaccattttgctgtggaa-tggtttttgtgagttgtactccaaacccattttgctgtggaaatgattttcagaattttcaatctcatcatc 4578863  T
Q  266 aacaccgtcgttcatc 281  Q
    ||||||||||||||||    
T  4578864 aacaccgtcgttcatc 4578879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4579021 - 4579137
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||||||| |||||| ||  ||||||||||||||||| | |      ||||||||||||||||| ||||||||||||    
T  4579021 accggaatgccaaaaccattttgctgtggaa-tggtttttg--agttgtactccaaacccattttgctgtggaaatggtttccagaagcttcaatctcat 4579117  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||| ||||||    
T  4579118 catcaacaccgtcattcatc 4579137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 19246766 - 19246716
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19246766 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 19246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 31711614 - 31711564
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31711614 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 31711564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 1095308 - 1095358
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  1095308 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 1095358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 20661535 - 20661585
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  20661535 atgccaaaaccattttgctgtggaaatggcttctgtgagttgtactccaaa 20661585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 20710603 - 20710557
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20710603 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 20710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 31783897 - 31783847
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31783897 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 31783847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 42364596 - 42364546
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  42364596 atgccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 42364546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 34726746 - 34726786
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34726746 cattttgctgtggaaatggtttctgtgagttgtactccaaa 34726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4281220 - 4281267
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  4281220 ccaaaaccattttgctgtggaaattgtttctgtgagttgtactccaaa 4281267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 30777477 - 30777516
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30777477 attttgctgtggaaatggtttctgtgagttgtactccaaa 30777516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 37867247 - 37867208
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37867247 attttgctgtggaaatggtttctgtgagttgtactccaaa 37867208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 39548484 - 39548441
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  39548484 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 39548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 16111617 - 16111567
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  16111617 atgccaaaaccattttactgtgaaaatggtttctgtgagttgtactccaaa 16111567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 36636150 - 36636200
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  36636150 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 36636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 41345294 - 41345344
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  41345294 atgccaaaaccgttttgctgtggaaatggtttatgtgagttgtactccaaa 41345344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 43823520 - 43823470
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  43823520 atgccaaaatcattttgctgtggaaatggtttatgtgagttgtactccaaa 43823470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 13081317 - 13081357
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgta 217  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  13081317 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 13081357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 3147237 - 3147276
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3147237 attttgctgtggaaatggtttatgtgagttgtactccaaa 3147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 3928265 - 3928218
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  3928265 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 3928218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 28056012 - 28056059
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  28056012 ccaaaaccattttgctgtgaaaatggtttctgtgagttatactccaaa 28056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 44341888 - 44341935
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  44341888 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 44341935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 4281044 - 4281090
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||    
T  4281044 caaaaccattttgttgtggaaatggtttctgtgagttatactccaaa 4281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 12449187 - 12449233
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  12449187 caaaaccattttgctgtgaaaatggtttctttgagttgtactccaaa 12449233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 22588458 - 22588508
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||||    
T  22588458 atgccaaaaacattttgttgtggaaatgatttctgtgagttgtactccaaa 22588508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 35126633 - 35126683
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||| ||||||||||| ||||||||||||||||||||||    
T  35126633 atgccaaaatcattttactgtggaaatgatttctgtgagttgtactccaaa 35126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 41345474 - 41345520
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||    
T  41345474 caaaaccattttgatgtggaaatggtttctgtgtgttgtactccaaa 41345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 44915435 - 44915481
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  44915435 caaaaccattttgctgtgaaaatggtttctgtgaattgtactccaaa 44915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 13081280 - 13081321
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  13081280 ccattttgcagtggaaatggtttctgtgagttggactccaaa 13081321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 39548521 - 39548480
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  39548521 ccattttgcagtggaaatggtttatgtgagttgtactccaaa 39548480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 4578713 - 4578749
Alignment:
Q  245 agaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4578713 agaatcttcaatctcatcatcaacaccgtcgttcatc 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 24183547 - 24183587
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  24183547 cattttgttgtggaaatggtttatgtgagttgtactccaaa 24183587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 2264543 - 2264508
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  2264543 gaatcttcaatctcatcatcaacaccgtcgttcatc 2264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 4280870 - 4280905
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  4280870 gaatcttcaatctcatcatcaacaccgtcgttcatc 4280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 25995945 - 25995910
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  25995945 gaatcttcaatctcatcatcaacaccgtcgttcatc 25995910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 28049202 - 28049155
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  28049202 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 28049155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 36636329 - 36636376
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| ||||    
T  36636329 ccaaaaccattttgctgtggaaatgatttatgtgagttgtacttcaaa 36636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 43823340 - 43823293
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| |||||||||| ||| ||||||||||||||||||    
T  43823340 ccaaaaccattttgttgtggaaatgatttatgtgagttgtactccaaa 43823293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 43823740 - 43823705
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  43823740 gaatcttcaatctcatcatcaacaccgtcgttcatc 43823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 20193971 - 20194017
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  20193971 caaaaccattttactgtgaaaatgatttctgtgagttgtactccaaa 20194017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 22596444 - 22596494
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||  ||||||||| ||||||||||||||||| |||||    
T  22596444 atgccaaaaccattttattgtggaaatagtttctgtgagttgtacaccaaa 22596494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 16141378 - 16141418
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  16141378 cattttgcactggaaatggtttctgtgagttggactccaaa 16141418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 16141421 - 16141457
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  16141421 cattttgttgtggaaatgatttctgtgagttgtactc 16141457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 16141464 - 16141504
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||| ||||||||||| ||| ||||||||||||||||||    
T  16141464 catttttctgtggaaatgatttatgtgagttgtactccaaa 16141504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 20710452 - 20710424
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  20710452 gaaatggtttctgtgagttgtactccaaa 20710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 23174604 - 23174723
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  23174604 accggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 23174703  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||| ||||||||||    
T  23174704 catcaacactgtcgttcatc 23174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 23174737 - 23174854
Alignment:
Q  170 cggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcatta 263  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| |    
T  23174737 cggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatca 23174836  T
Q  264 tcaacaccgtcgttcatc 281  Q
    |||||| |||||||||||    
T  23174837 tcaacatcgtcgttcatc 23174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 180557 - 180438
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  180557 accggaatgccaaaaccatttttctgtggaaattgtttctatgagttgtactccaaacccattttactgtggaaatggtttccagaatcttcaatctcat 180458  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  180457 catcaacaccgtcgttcatc 180438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 180697 - 180578
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||| ||| ||||  ||||||||||||||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  180697 accggaatgccaaaaccagttttctgtaaaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 180598  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  180597 catcaacaccgtcgttcatc 180578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 23921142 - 23921195
Alignment:
Q  171 ggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23921142 ggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 11422422 - 11422303
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||| |||||||||  ||||||| ||||||| |||||| |||||||||||||||||||||       | |||||||||||| ||||||||||||||||||    
T  11422422 accgaaatgccaaaatcattttgatgtggaagtggtttgtgtgagttgtactccaaacccattttgctgtggaaatggttttcagaatcttcaatctcat 11422323  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     || |||| |||||||||||    
T  11422322 cattaacatcgtcgttcatc 11422303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 2741566 - 2741519
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2741566 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 2741519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 21256047 - 21256097
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21256047 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 21256097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 28322610 - 28322657
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28322610 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 28322657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 11354451 - 11354501
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  11354451 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 11354501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 18057633 - 18057583
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  18057633 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 18057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 18928882 - 18928832
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  18928882 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 18928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 23319235 - 23319285
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  23319235 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 23319285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 31084239 - 31084189
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  31084239 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 31084189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 32595208 - 32595158
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  32595208 atgccaaaaccattttgccgtggaaatggtttctgtgagttgtactccaaa 32595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 33157095 - 33157045
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  33157095 atgccaaaaccattttcctgtggaaatggtttctgtgagttgtactccaaa 33157045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 37642950 - 37642904
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  37642950 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 37642904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 45890441 - 45890391
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  45890441 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 45890391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 47693806 - 47693856
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47693806 atgccaaaaccattttgctgtggaaatggtttgtgtgagttgtactccaaa 47693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 12070560 - 12070600
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12070560 cattttgctgtggaaatggtttctgtgagttgtactccaaa 12070600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30788837 - 30788790
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30788837 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 30788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 31084059 - 31084012
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  31084059 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 31084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 35197599 - 35197646
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  35197599 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 35197646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 1395268 - 1395218
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  1395268 atgccaaaatcattttgctgtggaaatagtttctgtgagttgtactccaaa 1395218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 4097235 - 4097285
Alignment:
Q  231 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  4097235 tggaaatggtttccagaatcttcaatctcatcatcaacatcatcgttcatc 4097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 14229301 - 14229351
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  14229301 atgccaaaatcattttgatgtggaaatggtttctgtgagttgtactccaaa 14229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 17811187 - 17811137
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  17811187 atgccaaaaccattttgctgtgaaaatggtttttgtgagttgtactccaaa 17811137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 18952526 - 18952576
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  18952526 atgccaaaatcattttactgtggaaatggtttctgtgagttgtactccaaa 18952576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 19216661 - 19216611
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  19216661 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 19216611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 20506516 - 20506566
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  20506516 atgcaaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 20506566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 28322564 - 28322614
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  28322564 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 28322614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 29945321 - 29945271
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  29945321 atgccaaaaccattttgctgtaaaaatggtttctgtgagttgtactccaaa 29945271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 31763879 - 31763829
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  31763879 atgccaaaaccattttactgtggaaatggtttttgtgagttgtactccaaa 31763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 35197420 - 35197470
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  35197420 atgccaaaaccatcttgttgtggaaatggtttctgtgagttgtactccaaa 35197470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 44261182 - 44261132
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  44261182 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 44261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 9628548 - 9628589
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  9628548 ccattttactgtggaaatggtttctgtgagttgtactccaaa 9628589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 2741603 - 2741559
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaaccc 227  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  2741603 ccattttgtagtggaaatggtttctgtgagttgtactccaaaccc 2741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 16116519 - 16116479
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  16116519 cattttgttgtggaaatggtttctgtgagttgtactccaaa 16116479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 30803027 - 30802979
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactcca 222  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  30803027 atgccaaaatcattttgctgtggaaatggtttatgtgagttgtactcca 30802979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 33097862 - 33097822
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  33097862 cattttgctgtggaaatggtttctgtgagttggactccaaa 33097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 51420908 - 51420868
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  51420908 cattttgctgtggaaatggtttctgtgagttgcactccaaa 51420868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 19216615 - 19216568
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||    
T  19216615 ccaaaaccattttgctgtggaaattgcttctgtgagttgtactccaaa 19216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 23921323 - 23921370
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  23921323 ccaaaaccattttgctgtggaaatggtttttgtgagttgtacttcaaa 23921370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31528998 - 31529045
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  31528998 ccaaaaccatttttctgtggaaatggtttatgtgagttgtactccaaa 31529045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 51801051 - 51801098
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||||    
T  51801051 ccaaaaccattttgctgtggaaatggcttttgtgagttgtactccaaa 51801098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 14389948 - 14389898
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||  ||||||||||||||||||||| |||||||||    
T  14389948 atgccaaaaccattttgccttggaaatggtttctgtgagttatactccaaa 14389898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 16116705 - 16116655
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||||||||||    
T  16116705 atgcaaaaaccattttgatgtgaaaatggtttctgtgagttgtactccaaa 16116655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 17893213 - 17893263
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  17893213 atgccaaaaccattttgttgtggaaatagtttttgtgagttgtactccaaa 17893263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 35754673 - 35754623
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  35754673 atgcaaaaaccattttgctgtggaaatgatttctgtaagttgtactccaaa 35754623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 44687778 - 44687828
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||| ||||||||| ||||||||    
T  44687778 atgccaaaaccattttgcagtggaaatggtttttgtgagttggactccaaa 44687828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 45849253 - 45849299
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  45849253 caaaaccattttgctgtggaaatggtttttgttagttgtactccaaa 45849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 31528961 - 31529002
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  31528961 ccattttgcagtggaaatggtttctgtgagttggactccaaa 31529002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 51801014 - 51801055
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  51801014 ccattttgcagtggaaatggtttctgtgagttggactccaaa 51801055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 180745 - 180710
Alignment:
Q  245 agaatcttcaatctcattatcaacaccgtcgttcat 280  Q
    ||||||||||||||||| ||||||||||||||||||    
T  180745 agaatcttcaatctcatcatcaacaccgtcgttcat 180710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 8401562 - 8401597
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  8401562 gaatcttcaatctcatcatcaacaccgtcgttcatc 8401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 19850708 - 19850661
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  19850708 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 19850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 23921092 - 23921127
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  23921092 gaatcttcaatctcatcatcaacaccgtcgttcatc 23921127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 34370427 - 34370392
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  34370427 gaatcttcaatctcatcatcaacaccgtcgttcatc 34370392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 35197202 - 35197237
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  35197202 gaatcttcaatctcatcatcaacaccgtcgttcatc 35197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 44261136 - 44261089
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| |||||||||||||||||||| | ||||||||||    
T  44261136 ccaaaaccattttgttgtggaaatggtttctgtgactcgtactccaaa 44261089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 44687867 - 44687914
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| |||||||||||||| ||||||||||||| ||||    
T  44687867 ccaaaaccattttgttgtggaaatggtttatgtgagttgtacttcaaa 44687914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 51420958 - 51420911
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||| ||||||||||||||||||||||  ||||||||    
T  51420958 ccaaaaccattttgcagtggaaatggtttctgtgagtttgactccaaa 51420911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 6708417 - 6708371
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  6708417 caaaaccattttactgtgaaaatgatttctgtgagttgtactccaaa 6708371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 9040995 - 9041041
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| ||||||||||||||||| ||| ||||||||||||    
T  9040995 caaaaccattttactgtggaaatggtttctatgaattgtactccaaa 9041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 10498086 - 10498040
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| |||||||||||||||||||| |||  ||||||||||||||||    
T  10498086 caaaaccattttgctgtggaaatggcttcaatgagttgtactccaaa 10498040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 12796533 - 12796483
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||| ||||  |||| |||||||||||||||||||||||    
T  12796533 atgccaaaaccattttcctgtaaaaatagtttctgtgagttgtactccaaa 12796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 32143712 - 32143758
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  32143712 caaaaccattttactgtggaaatgatttctgtgaattgtactccaaa 32143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 51904826 - 51904872
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  51904826 caaaaccattttactgtggaaatgatttctgtgaattgtactccaaa 51904872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 10497911 - 10497866
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  10497911 ccaaaaccattttgctgtggaaatgatttctgt--gttgtactccaaa 10497866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 10497935 - 10497907
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  10497935 gaaatggtttctgtgagttgtactccaaa 10497907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 14390042 - 14390014
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  14390042 gaaatggtttctgtgagttgtactccaaa 14390014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 16116550 - 16116522
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  16116550 gaaatggtttctgtgagttgtactccaaa 16116522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 17893118 - 17893146
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  17893118 gaaatggtttctgtgagttgtactccaaa 17893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 21256201 - 21256229
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  21256201 gaaatggtttctgtgagttgtactccaaa 21256229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 23277328 - 23277356
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  23277328 gaaatggtttctgtgagttgtactccaaa 23277356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 23921299 - 23921327
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  23921299 gaaatggtttctgtgagttgtactccaaa 23921327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 24368614 - 24368586
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  24368614 gaaatggtttctgtgagttgtactccaaa 24368586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 31084083 - 31084055
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  31084083 gaaatggtttctgtgagttgtactccaaa 31084055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 35754766 - 35754738
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  35754766 gaaatggtttctgtgagttgtactccaaa 35754738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 37642800 - 37642772
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  37642800 gaaatggtttctgtgagttgtactccaaa 37642772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 45849154 - 45849182
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  45849154 gaaatggtttctgtgagttgtactccaaa 45849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 19384583 - 19384701
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacc-----cgtatggaaatggtttccagaatcttcaatctcatt 262  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||     
T  19384583 accgaaatgccaaaaccatttttctgtggaaatggtttctgtgagttgtactccaaaccattttgttgtggaaatggtttccagaatcttcaatctcatc 19384682  T
Q  263 atcaacaccgtcgttcatc 281  Q
    |||||||||||||||||||    
T  19384683 atcaacaccgtcgttcatc 19384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 52986695 - 52986814
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||| ||||||||    
T  52986695 accggaatgccaaaaccattttgctatggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccaaaatcttgaatctcat 52986794  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  52986795 catcaacaccgtcgttcatc 52986814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 52986826 - 52986945
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt------atggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| |       |||||||||||||||||||||| ||||||||    
T  52986826 accggaatgccaaaaccattttactgtggaaatggtttctatgagttgtactccaaacccattttgcagtggaaatggtttccagaatcttaaatctcat 52986925  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     ||||| |||||||||||||    
T  52986926 catcaataccgtcgttcatc 52986945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 31853024 - 31852905
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||    
T  31853024 accggaatgccaaaatcatttatctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccataatcttcaatctcat 31852925  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||| ||||||||||    
T  31852924 catcaacactgtcgttcatc 31852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 50754899 - 50754784
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcattatc 265  Q
    |||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| | |      |||||||||||||||||||||||||||||| |||    
T  50754899 gaatgccaaaaccatttagctatggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatcatc 50754800  T
Q  266 aacaccgtcgttcatc 281  Q
    ||||| ||||||||||    
T  50754799 aacactgtcgttcatc 50754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 50755030 - 50754915
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcattatc 265  Q
    |||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| | |      |||||||||||||||||||||||||||||| |||    
T  50755030 gaatgccaaaaccatttagctatggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatcatc 50754931  T
Q  266 aacaccgtcgttcatc 281  Q
    ||||| ||||||||||    
T  50754930 aacactgtcgttcatc 50754915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 51361715 - 51361834
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||| |||||||||| ||||| |||||||||||||||||||       | |||||||||||||||||||||| || |||||    
T  51361715 accggaatgccaaaaccattttgttgtggaaatgatttctctgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttgaacctcat 51361814  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||| ||||||||    
T  51361815 catcaacaccgccgttcatc 51361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 7044637 - 7044687
Alignment:
Q  231 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7044637 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtcgttcatc 7044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23755932 - 23755885
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23755932 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23755885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 8718951 - 8718901
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  8718951 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 8718901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 9070838 - 9070788
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  9070838 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 9070788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 16653600 - 16653550
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  16653600 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 16653550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 19012495 - 19012445
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  19012495 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 19012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 27446153 - 27446203
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  27446153 atgccaaaaccattttgctgtggaaatggtttctgtgaattgtactccaaa 27446203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 47729007 - 47728957
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  47729007 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 47728957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 47924306 - 47924356
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  47924306 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactgcaaa 47924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 51681419 - 51681469
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  51681419 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 51681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 12974131 - 12974180
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaa 223  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  12974131 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacaccaa 12974180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 53595485 - 53595444
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  53595485 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 53595444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 16276909 - 16276949
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16276909 cattttgctgtggaaatggtttctgtgagttgtactccaaa 16276949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 28299512 - 28299559
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  28299512 ccaaaaccattttgctatggaaatggtttctgtgagttgtactccaaa 28299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 23756111 - 23756061
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  23756111 atgccaaaaccattttgatgtggaaatggcttctgtgagttgtactccaaa 23756061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 41191616 - 41191666
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  41191616 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 41191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 49053376 - 49053416
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  49053376 cattttgctgtggaaatggtttctgtgagttgtacttcaaa 49053416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23699924 - 23699877
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  23699924 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23699877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23718379 - 23718332
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  23718379 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23718332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23736835 - 23736788
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  23736835 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23736788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 28299555 - 28299602
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  28299555 ccaaaaccattttgttgtggaaatggtttccgtgagttgtactccaaa 28299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 39194554 - 39194601
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  39194554 ccaaaaccattttgatgtggaaatggtttatgtgagttgtactccaaa 39194601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 41191796 - 41191843
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  41191796 ccaaaaccattttgttgtggaaatggtttctgtgtgttgtactccaaa 41191843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 8036929 - 8036979
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||  ||||||||||||||||    
T  8036929 atgccaaaaccattttgcggtggaaatggtttccttgagttgtactccaaa 8036979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 28299470 - 28299516
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  28299470 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 28299516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 34562610 - 34562656
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  34562610 caaaaccattttgctgtgaaaatggtttatgtgagttgtactccaaa 34562656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 36185849 - 36185895
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  36185849 caaaaccatttttctgtggaaatggtttttgtgagttgtactccaaa 36185895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 53595534 - 53595494
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgta 217  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  53595534 ccaaaaccattttgatgtggaaatggtttctgtgagttgta 53595494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 7044511 - 7044546
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  7044511 gaatcttcaatctcatcatcaacaccgtcgttcatc 7044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 19384536 - 19384571
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  19384536 gaatcttcaatctcatcatcaacaccgtcgttcatc 19384571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34562787 - 34562830
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||    
T  34562787 ccaaaaccattttgctgtggaaatggtttctgtgcgttgaactc 34562830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 50755081 - 50755046
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||||||||||| |||||||||||    
T  50755081 gaatcttcaatctcattatcaacagcgtcgttcatc 50755046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 51361668 - 51361703
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  51361668 gaatcttcaatctcatcatcaacaccgtcgttcatc 51361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 9643038 - 9643088
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||| ||||||||||||| ||| ||||    
T  9643038 atgccaaaaccattttggtgtggaaatgatttctgtgagttggacttcaaa 9643088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 14743647 - 14743597
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | ||||||||||||||||  ||| ||||||||||||||||||    
T  14743647 atgccaaaactattttgctgtggaaataatttatgtgagttgtactccaaa 14743597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 38345384 - 38345334
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||||||||||||||||| |||| | |||||||    
T  38345384 atgccaaaaccattttgccgtggaaatggtttctgtaagttatcctccaaa 38345334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 51846214 - 51846264
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| || |||||||||| ||||||| |||||||| ||||||||||||||    
T  51846214 atgcctaaaccattttgctatggaaattgtttctgtcagttgtactccaaa 51846264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 52986636 - 52986670
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcat 280  Q
    |||||||||||||||| ||||||||||||||||||    
T  52986636 gaatcttcaatctcatcatcaacaccgtcgttcat 52986670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 9183781 - 9183814
Alignment:
Q  191 ctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||||||    
T  9183781 ctgtgaaaatggtttctgtgagttgtactccaaa 9183814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 53595571 - 53595530
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||    
T  53595571 ccattttgcagtggaaatggtttatgtgagttggactccaaa 53595530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 19012560 - 19012532
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  19012560 gaaatggtttctgtgagttgtactccaaa 19012532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 23755956 - 23755928
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  23755956 gaaatggtttctgtgagttgtactccaaa 23755928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 34562763 - 34562791
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  34562763 gaaatggtttctgtgagttgtactccaaa 34562791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 35221594 - 35221622
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  35221594 gaaatggtttctgtgagttgtactccaaa 35221622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 36185772 - 36185800
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  36185772 gaaatggtttctgtgagttgtactccaaa 36185800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 38245765 - 38245646
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||       | |||||||||||||||||||||| ||||||||    
T  38245765 accggaatgccaaaaccattttgctgtgtaaatggtttctgtgagttgtactacaaacccattttgttgtggaaatggtttccagaatcttaaatctcat 38245666  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  38245665 catcaacaccgtcgttcatc 38245646  T

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Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 10473359 - 10473241
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc-----gtatggaaatggtttccagaatcttcaatctcatt 262  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     ||   | |||||||||||||||||||||||||||     
T  10473359 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaatggtttccagaatcttcaatctcatc 10473260  T
Q  263 atcaacaccgtcgttcatc 281  Q
    ||||||| ||| |||||||    
T  10473259 atcaacatcgttgttcatc 10473241  T

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Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 10473490 - 10473371
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| | |||||| ||||||||| ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  10473490 accggaatgccaaaactattttgttgtggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 10473391  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||| ||||||||||    
T  10473390 catcaacactgtcgttcatc 10473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 45256730 - 45256611
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||||       | ||||||||||||| |||||||||||||||||    
T  45256730 accggaatgccaaaaccattttgctgtagaaatggtttatgtgagttgtattccaaacccattttgttgtggaaatggtttcgagaatcttcaatctcat 45256631  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||||||||||    
T  45256630 catcaacaccgtcgttcatc 45256611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 638836 - 638717
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 261  Q
    |||||||||||||| ||||||| || |||||||||||| |||||||||||||||||||||       | ||||||||||||| |||||||||||||||||    
T  638836 accggaatgccaaaaccatttttctatggaaatggtttttgtgagttgtactccaaacccattttgctgtggaaatggtttctagaatcttcaatctcat 638737  T
Q  262 tatcaacaccgtcgttcatc 281  Q
     |||||||||||| ||||||    
T  638736 catcaacaccgtcattcatc 638717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 50644542 - 50644490
Alignment:
Q  172 gaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50644542 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 50644490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 12722878 - 12722928
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12722878 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 12722928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 17109859 - 17109909
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17109859 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 17109909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 21995774 - 21995724
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21995774 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 21995724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 26577458 - 26577554
Alignment:
Q  168 accggaatgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 259  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||| |||||||||       | |||||||||||||||||||||||||||||    
T  26577458 accggaatgccatacc-attttgttgtggaaatggtttctgtgagttgtaatccaaacccattttgatgtggaaatggtttccagaatcttcaatctc 26577554  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 54895508 - 54895458
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54895508 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 54895458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 6385733 - 6385783
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  6385733 atgccaaaaccattttgctgtggaaatggtttctgtgagttggactccaaa 6385783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 8157229 - 8157279
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  8157229 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 8157279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 9553068 - 9553118
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  9553068 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 9553118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 25573595 - 25573645
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  25573595 atgccaaaaccattttgctgtggaaatggtttctgtgagttggactccaaa 25573645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 27765103 - 27765053
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27765103 atgccaaaaccattttgctgtggaaatggtttgtgtgagttgtactccaaa 27765053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 31763048 - 31763098
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  31763048 atgccaaaaccattttggtgtggaaatggtttctgtgagttgtactccaaa 31763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 36924341 - 36924295
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  36924341 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 36924295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 50562891 - 50562941
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50562891 atgccaaaaccattttgctgtgtaaatggtttctgtgagttgtactccaaa 50562941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 6385779 - 6385826
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  6385779 ccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 6385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 8166029 - 8166068
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8166029 attttgctgtggaaatggtttctgtgagttgtactccaaa 8166068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 29826090 - 29826137
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  29826090 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 29826137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 2124485 - 2124535
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  2124485 atgccaaaatcattttgctgtggaaatggtttctgtgagttttactccaaa 2124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 10374147 - 10374097
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  10374147 atgccaaaaccattttgccgtgaaaatggtttctgtgagttgtactccaaa 10374097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 16474964 - 16475010
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||    
T  16474964 caaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 16475010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 18924101 - 18924051
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  18924101 atgccaaaaccattttgctgtggaaattgtttctgtgagttgtacttcaaa 18924051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 21097956 - 21097906
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  21097956 atgccaaaaccattttgatgtggaaatggtttatgtgagttgtactccaaa 21097906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 30358670 - 30358628
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  30358670 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 30358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 37059855 - 37059905
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  37059855 atgccaaaactattttgctgtggaaatggtttttgtgagttgtactccaaa 37059905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 43374551 - 43374501
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  43374551 atgccaaaaccattttgctatggaaatggtttatgtgagttgtactccaaa 43374501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 22180434 - 22180475
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  22180434 ccattttgctgtggaaatggtttatgtgagttgtactccaaa 22180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 29825920 - 29825961
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  29825920 ccattttgctgtggaaatggtttctgtgagttctactccaaa 29825961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 49137344 - 49137385
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  49137344 ccattttgctgtggaaatggtttatgtgagttgtactccaaa 49137385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 25573641 - 25573685
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactcc 221  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  25573641 ccaaaaccattttgttgtggaaatggtttctgtgagttgtactcc 25573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 43852161 - 43852201
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  43852161 cattttgctgtggaattggtttctgtgagttgtactccaaa 43852201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 48077323 - 48077363
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  48077323 cattttgctgtggaaatggtttctgtgagttgtacaccaaa 48077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 1729007 - 1729054
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  1729007 ccaaaaccattttgctgtggaaatgatttctgtgtgttgtactccaaa 1729054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 4169243 - 4169200
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgta 217  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  4169243 atgccaaaactattttgctgtggaaatggtttctgtgagttgta 4169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 8165913 - 8165952
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  8165913 attttgctgtggaaatggtttctgtgagttgtattccaaa 8165952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38010551 - 38010504
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  38010551 ccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 38010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 1492772 - 1492726
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| || |||||||||||||||||||||||||||||||    
T  1492772 caaaaccattttactatggaaatggtttctgtgagttgtactccaaa 1492726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 6841960 - 6842010
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  6841960 atgctaaaaccattttactgtggaaatggtttctgtaagttgtactccaaa 6842010  T

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Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 9551769 - 9551807
Alignment:
Q  243 ccagaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9551769 ccagaatcttcaatctcatcatcaacaccgtcgttcatc 9551807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 36309516 - 36309470
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  36309516 caaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 36309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 16299423 - 16299386
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactc 220  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  16299423 ccattttgcagtggaaatggtttctgtgagttgtactc 16299386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 25573690 - 25573731
Alignment:
Q  183 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  25573690 ccattttgttgtggaaatggtttttgtgagttgtactccaaa 25573731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 16299379 - 16299339
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  16299379 cattttgatgtggaaatggtttctgtgagttgtacttcaaa 16299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 33883433 - 33883473
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  33883433 cattttactgtggaaatggtttatgtgagttgtactccaaa 33883473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 49137513 - 49137557
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactcc 221  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||    
T  49137513 ccaaaaccattttgttgtggaaatggtttctgtgtgttgtactcc 49137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 638883 - 638848
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  638883 gaatcttcaatctcatcatcaacaccgtcgttcatc 638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 6768496 - 6768457
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  6768496 attttgctgtgaaaatggtttctatgagttgtactccaaa 6768457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 10473537 - 10473502
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  10473537 gaatcttcaatctcatcatcaacaccgtcgttcatc 10473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 20862375 - 20862336
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  20862375 attttgctgtggaaatagtttatgtgagttgtactccaaa 20862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 51836475 - 51836510
Alignment:
Q  246 gaatcttcaatctcattatcaacaccgtcgttcatc 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  51836475 gaatcttcaatctcatcatcaacaccgtcgttcatc 51836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 9552196 - 9552226
Alignment:
Q  193 gtggaaatggtttctgtgagttgtactccaa 223  Q
    |||||||||||||||||||||||||||||||    
T  9552196 gtggaaatggtttctgtgagttgtactccaa 9552226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 9967814 - 9967860
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| || |||||||||||||||||| ||||||||||||    
T  9967814 caaaaccattttactatggaaatggtttctgtgaattgtactccaaa 9967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 24687083 - 24687037
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||| ||||| ||||||| ||||    
T  24687083 caaaaccattttgctgtggaaatggtttttgtgatttgtacttcaaa 24687037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 27872939 - 27872989
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||| ||| |||| |||||||||||||||||| ||||    
T  27872939 atgccaaaaccattttgccgtgaaaatagtttctgtgagttgtacttcaaa 27872989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 30358451 - 30358413
Alignment:
Q  186 ttttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  30358451 ttttgttgtggaaatggtttctgtgtgttgtactccaaa 30358413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 36621182 - 36621228
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||| ||| |||||||| |||||||||    
T  36621182 caaaaccattttgctgtggaaatgatttttgtgagttatactccaaa 36621228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 47567996 - 47567950
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||| || |||||||||||||||||| ||||||||||||    
T  47567996 caaaaccattttactatggaaatggtttctgtgaattgtactccaaa 47567950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 52325203 - 52325158
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  52325203 caaaaccattttgctgtggaaatggtttctgtga-ttgtacttcaaa 52325158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 4169088 - 4169060
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  4169088 gaaatggtttctgtgagttgtactccaaa 4169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 12722784 - 12722812
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  12722784 gaaatggtttctgtgagttgtactccaaa 12722812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 21097802 - 21097774
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  21097802 gaaatggtttctgtgagttgtactccaaa 21097774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 22180580 - 22180608
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  22180580 gaaatggtttctgtgagttgtactccaaa 22180608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 27764950 - 27764922
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  27764950 gaaatggtttctgtgagttgtactccaaa 27764922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 29826066 - 29826094
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  29826066 gaaatggtttctgtgagttgtactccaaa 29826094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 38010575 - 38010547
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  38010575 gaaatggtttctgtgagttgtactccaaa 38010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 42788625 - 42788665
Alignment:
Q  184 cattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||| ||||||||||| |||||||||| |||||    
T  42788625 cattttgctgtgaaaatggtttctatgagttgtacaccaaa 42788665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 50644384 - 50644356
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  50644384 gaaatggtttctgtgagttgtactccaaa 50644356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 53865241 - 53865213
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  53865241 gaaatggtttctgtgagttgtactccaaa 53865213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 28489 - 28439
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28489 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 28439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 14442 - 14396
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  14442 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 14396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 14291 - 14263
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  14291 gaaatggtttctgtgagttgtactccaaa 14263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 23684 - 23723
Alignment:
Q  185 attttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23684 attttgctgtggaaatggtttctgtgagttgtactccaaa 23723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 72617 - 72567
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  72617 atgccaaaaccattttgctgtgcaaatgatttctgtgagttgtactccaaa 72567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 203132 - 203182
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  203132 atgccaaaactattttgctgtggaaattgtttctgtgagttgtactccaaa 203182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 203288 - 203316
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  203288 gaaatggtttctgtgagttgtactccaaa 203316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 96103 - 96053
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  96103 atgctaaaaccattttgctgtggaaatggtttctgtgatttgtactccaaa 96053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 9650 - 9700
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||| | |||||||||||||||| |||| ||||||||||||||||||    
T  9650 atgccaaaactattttgctgtggaaatagtttatgtgagttgtactccaaa 9700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 37737 - 37687
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||||||||||    
T  37737 atgccaaaatcattttgctgtgaaaatgatttctgtgagttgtactccaaa 37687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 20064 - 20109
Alignment:
Q  178 caaacccattttgctgtggaaatggtttctgtgagttgtactccaa 223  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||    
T  20064 caaaaccattttgttgtggaaattgtttctgtgagttgtactccaa 20109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 8003 - 7956
Alignment:
Q  177 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  8003 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 33720 - 33670
Alignment:
Q  174 atgccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||| ||||||    
T  33720 atgccaaaatcattttgctgtgaaaatgatttctgtgagttgtattccaaa 33670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 3152 - 3124
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  3152 gaaatggtttctgtgagttgtactccaaa 3124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 10010 - 9962
Alignment:
Q  176 gccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 224  Q
    |||||| ||||| |||||||||||||||||  |||||||||| ||||||    
T  10010 gccaaaaccattgtgctgtggaaatggttttggtgagttgtaatccaaa 9962  T

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Target: scaffold0516 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 1246 - 1218
Alignment:
Q  196 gaaatggtttctgtgagttgtactccaaa 224  Q
    |||||||||||||||||||||||||||||    
T  1246 gaaatggtttctgtgagttgtactccaaa 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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