View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0203_low_10 (Length: 253)
Name: NF0203_low_10
Description: NF0203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0203_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 8002714 - 8002515
Alignment:
| Q |
40 |
gactagtaataataattaggaaatctagttttggttaagtcattatgacaagtacaagtgattgagtctagttttagttaagtcattacgacaagatcaa |
139 |
Q |
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| T |
8002714 |
gactaataataataattaggaaatctagttttggttaagtcattatgacaagtacaagtgattgagtctagttttagttaagtcattacgacaagatcaa |
8002615 |
T |
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| Q |
140 |
gtgattgagtccaagtggataatgagcttctcctaaaagaatcgttcagaataacgacgattgacttccgatataaataattcttgaccataattaactt |
239 |
Q |
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| T |
8002614 |
gtgattgagttcaagtggataatgagcttctcctaaaagaatcgttcaaaataaccaagattgacttccgatataaataattcttgaccataattaactt |
8002515 |
T |
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