View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0206Eco13 (Length: 308)
Name: NF0206Eco13
Description: NF0206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0206Eco13 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 33376810 - 33376575
Alignment:
| Q |
10 |
agtgccttcaattttgaaaaggtgaggatgtgaagttgcatatgtgtttcttggtggaaagtataaggagaatctgttccaagaagcatcattgttgatg |
109 |
Q |
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| T |
33376810 |
agtgccttcaattttgaaaaggtgaggatgtgaagttgcatatgtgtttcttggtggaaagtataaggagaatctgttccaagaagcatcaatgttgatg |
33376711 |
T |
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| Q |
110 |
atactatcacctcctatgtagtaacctgtgttgtgatcacttaaagggaaagagttgaatttctttgttgttggagttgtttctgggatgatggaagcac |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33376710 |
atactatcacctcctatgtagtaacctgtgttgtgatcacttaaagggaaagagttgaatttctttgttgttggagttgtttctgggatgatggaagcac |
33376611 |
T |
|
| Q |
210 |
aatattctttgtaagatgattttgaggctaatgaga |
245 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
33376610 |
aatattctttgtaagatgattttgaggctaatgaga |
33376575 |
T |
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