View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0206Eco3 (Length: 600)

Name: NF0206Eco3
Description: NF0206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0206Eco3
NF0206Eco3
[»] chr7 (59 HSPs)
chr7 (4-423)||(13384543-13384962)
chr7 (266-423)||(18087568-18087725)
chr7 (322-423)||(17885669-17885770)
chr7 (322-423)||(17102275-17102376)
chr7 (267-374)||(4226215-4226323)
chr7 (285-423)||(43124400-43124539)
chr7 (350-423)||(10936108-10936181)
chr7 (283-423)||(18086330-18086471)
chr7 (322-423)||(27991994-27992095)
chr7 (283-423)||(33808364-33808505)
chr7 (259-423)||(47945398-47945554)
chr7 (259-423)||(47950828-47950984)
chr7 (356-423)||(27396670-27396737)
chr7 (352-423)||(40380000-40380071)
chr7 (322-423)||(2640219-2640320)
chr7 (350-423)||(24389099-24389172)
chr7 (356-423)||(48788844-48788911)
chr7 (356-422)||(3914458-3914524)
chr7 (350-423)||(6253754-6253827)
chr7 (322-423)||(19204744-19204845)
chr7 (350-423)||(28469051-28469124)
chr7 (354-423)||(42019638-42019707)
chr7 (278-374)||(45914614-45914711)
chr7 (315-423)||(5457186-5457294)
chr7 (278-373)||(25628569-25628665)
chr7 (324-423)||(42362491-42362590)
chr7 (322-423)||(13386033-13386134)
chr7 (267-320)||(47558175-47558228)
chr7 (350-421)||(6571262-6571332)
chr7 (275-373)||(12228476-12228575)
chr7 (324-423)||(17886778-17886877)
chr7 (322-421)||(22871351-22871450)
chr7 (280-373)||(5455918-5456012)
chr7 (284-373)||(23058674-23058764)
chr7 (278-320)||(32934587-32934629)
chr7 (278-373)||(42618150-42618246)
chr7 (268-374)||(12644036-12644143)
chr7 (285-423)||(18855902-18856041)
chr7 (281-383)||(32688462-32688565)
chr7 (281-320)||(47558983-47559022)
chr7 (278-320)||(10600188-10600230)
chr7 (283-423)||(32068137-32068278)
chr7 (283-320)||(42618056-42618093)
chr7 (322-423)||(42731705-42731806)
chr7 (287-423)||(43266514-43266651)
chr7 (280-320)||(23058574-23058614)
chr7 (278-373)||(32068335-32068431)
chr7 (278-373)||(46205548-46205644)
chr7 (283-373)||(25628722-25628813)
chr7 (356-423)||(32053184-32053251)
chr7 (372-423)||(32298818-32298869)
chr7 (283-373)||(32934439-32934530)
chr7 (280-373)||(25453219-25453313)
chr7 (278-320)||(25453367-25453409)
chr7 (321-363)||(42363671-42363713)
chr7 (354-392)||(47946792-47946830)
chr7 (354-392)||(47952222-47952260)
chr7 (283-320)||(27138185-27138222)
chr7 (350-383)||(37657164-37657197)
[»] chr4 (73 HSPs)
chr4 (4-165)||(816746-816907)
chr4 (284-423)||(147360-147500)
chr4 (284-423)||(148002-148142)
chr4 (322-423)||(24349715-24349816)
chr4 (350-423)||(52909567-52909640)
chr4 (323-423)||(1179087-1179187)
chr4 (352-423)||(10781800-10781871)
chr4 (322-423)||(13058268-13058369)
chr4 (350-423)||(14802049-14802122)
chr4 (322-423)||(37248491-37248592)
chr4 (322-423)||(46661200-46661301)
chr4 (350-423)||(51692833-51692906)
chr4 (285-423)||(55867362-55867501)
chr4 (272-373)||(32063571-32063673)
chr4 (324-410)||(54713683-54713769)
chr4 (322-423)||(7452089-7452190)
chr4 (350-423)||(10780754-10780827)
chr4 (350-423)||(10974363-10974436)
chr4 (350-423)||(34765421-34765494)
chr4 (322-423)||(37976194-37976295)
chr4 (322-423)||(50418709-50418810)
chr4 (278-423)||(27068951-27069097)
chr4 (353-423)||(35028039-35028109)
chr4 (350-423)||(24350746-24350819)
chr4 (322-423)||(24711366-24711467)
chr4 (350-423)||(36008885-36008958)
chr4 (322-423)||(43155570-43155671)
chr4 (322-423)||(44967110-44967211)
chr4 (350-423)||(49879248-49879321)
chr4 (328-423)||(39539210-39539305)
chr4 (357-423)||(11108161-11108227)
chr4 (278-423)||(27891625-27891771)
chr4 (278-320)||(40316904-40316946)
chr4 (278-320)||(40326978-40327020)
chr4 (350-423)||(5369181-5369254)
chr4 (322-423)||(15507714-15507815)
chr4 (278-373)||(52573319-52573415)
chr4 (278-373)||(54858651-54858747)
chr4 (356-423)||(18831637-18831704)
chr4 (271-373)||(30641609-30641711)
chr4 (283-373)||(50503916-50504007)
chr4 (278-423)||(10408128-10408274)
chr4 (278-320)||(22718178-22718220)
chr4 (278-320)||(50504064-50504106)
chr4 (354-424)||(53129547-53129616)
chr4 (322-423)||(17355966-17356067)
chr4 (322-383)||(54434270-54434331)
chr4 (318-423)||(56015929-56016034)
chr4 (278-373)||(51859498-51859594)
chr4 (285-320)||(23455609-23455644)
chr4 (278-320)||(22986996-22987038)
chr4 (282-320)||(23455099-23455137)
chr4 (357-423)||(23613599-23613665)
chr4 (274-423)||(54858795-54858945)
chr4 (283-320)||(27069154-27069191)
chr4 (283-320)||(39666921-39666958)
chr4 (322-423)||(54086736-54086837)
chr4 (280-320)||(10408034-10408074)
chr4 (278-373)||(39701000-39701096)
chr4 (368-423)||(24411680-24411735)
chr4 (283-409)||(39538135-39538262)
chr4 (322-373)||(40388392-40388443)
chr4 (278-320)||(11524188-11524230)
chr4 (286-423)||(39667023-39667161)
chr4 (278-320)||(45463312-45463354)
chr4 (318-372)||(55866201-55866255)
chr4 (283-320)||(11524094-11524131)
chr4 (283-320)||(45463218-45463255)
chr4 (322-383)||(53702098-53702159)
chr4 (278-373)||(9731451-9731547)
chr4 (260-296)||(11446438-11446474)
chr4 (288-320)||(38813699-38813731)
chr4 (284-320)||(52815808-52815844)
[»] chr3 (60 HSPs)
chr3 (4-180)||(35716807-35716982)
chr3 (293-423)||(41558138-41558269)
chr3 (322-423)||(19740964-19741065)
chr3 (345-423)||(53757032-53757110)
chr3 (322-423)||(23458020-23458121)
chr3 (322-423)||(33689423-33689523)
chr3 (350-423)||(36417729-36417802)
chr3 (350-423)||(40758424-40758497)
chr3 (350-423)||(36418002-36418075)
chr3 (84-161)||(49023632-49023709)
chr3 (322-410)||(46475067-46475155)
chr3 (348-423)||(3849072-3849147)
chr3 (267-373)||(9368531-9368638)
chr3 (322-423)||(9367782-9367883)
chr3 (332-423)||(41558049-41558140)
chr3 (278-423)||(3469241-3469387)
chr3 (285-374)||(32717025-32717115)
chr3 (278-423)||(40788659-40788805)
chr3 (272-367)||(6956345-6956442)
chr3 (350-423)||(26463673-26463746)
chr3 (350-423)||(42343045-42343118)
chr3 (350-423)||(42855619-42855692)
chr3 (280-423)||(13948821-13948965)
chr3 (278-373)||(29118777-29118873)
chr3 (265-320)||(29192894-29192948)
chr3 (283-373)||(35643942-35644033)
chr3 (265-320)||(35759029-35759084)
chr3 (283-373)||(41422063-41422154)
chr3 (272-373)||(1078627-1078729)
chr3 (278-320)||(3596348-3596390)
chr3 (322-408)||(43384569-43384655)
chr3 (276-373)||(52032229-52032327)
chr3 (161-206)||(49946990-49947035)
chr3 (283-320)||(52032383-52032420)
chr3 (315-423)||(25108374-25108482)
chr3 (278-373)||(32306515-32306611)
chr3 (280-320)||(40788565-40788605)
chr3 (272-320)||(43608717-43608765)
chr3 (283-373)||(29118629-29118720)
chr3 (280-374)||(29192125-29192220)
chr3 (285-320)||(45279204-45279239)
chr3 (278-320)||(10294706-10294748)
chr3 (282-320)||(32716394-32716432)
chr3 (283-320)||(3469444-3469481)
chr3 (259-320)||(41989510-41989571)
chr3 (278-373)||(29686032-29686128)
chr3 (352-423)||(3850443-3850514)
chr3 (352-423)||(41988625-41988696)
chr3 (336-423)||(53856357-53856444)
chr3 (288-373)||(11910790-11910876)
chr3 (284-373)||(37778518-37778608)
chr3 (278-423)||(47551534-47551680)
chr3 (283-320)||(10307619-10307656)
chr3 (283-320)||(29686185-29686222)
chr3 (322-423)||(36314339-36314440)
chr3 (322-423)||(48322418-48322519)
chr3 (322-383)||(55052360-55052421)
chr3 (284-320)||(32306669-32306705)
chr3 (284-320)||(43105378-43105414)
chr3 (276-320)||(43998382-43998426)
[»] chr2 (42 HSPs)
chr2 (268-423)||(6588724-6588880)
chr2 (259-423)||(25230143-25230311)
chr2 (315-423)||(21370481-21370589)
chr2 (315-423)||(44044155-44044263)
chr2 (324-423)||(44045290-44045389)
chr2 (322-423)||(11163095-11163196)
chr2 (350-423)||(13692534-13692607)
chr2 (322-423)||(36480004-36480105)
chr2 (322-423)||(37895388-37895489)
chr2 (322-423)||(39498565-39498666)
chr2 (350-423)||(44713836-44713909)
chr2 (322-423)||(6658133-6658234)
chr2 (322-423)||(16099310-16099411)
chr2 (322-423)||(34448081-34448182)
chr2 (269-374)||(25624337-25624443)
chr2 (322-423)||(15848374-15848475)
chr2 (350-423)||(36382441-36382514)
chr2 (350-423)||(36755402-36755475)
chr2 (322-423)||(39423801-39423902)
chr2 (268-423)||(202587-202743)
chr2 (324-423)||(25231136-25231235)
chr2 (280-374)||(25623378-25623473)
chr2 (278-423)||(8710707-8710853)
chr2 (322-423)||(9076353-9076454)
chr2 (315-423)||(3556288-3556396)
chr2 (278-373)||(15604578-15604674)
chr2 (285-422)||(39936495-39936633)
chr2 (357-423)||(45556368-45556434)
chr2 (322-423)||(10713009-10713110)
chr2 (280-320)||(8710613-8710653)
chr2 (280-320)||(15604484-15604524)
chr2 (278-373)||(41587325-41587421)
chr2 (337-423)||(3555291-3555377)
chr2 (278-320)||(11830509-11830551)
chr2 (322-423)||(2318199-2318300)
chr2 (362-423)||(2318836-2318897)
chr2 (283-423)||(41588302-41588443)
chr2 (283-373)||(8342278-8342369)
chr2 (315-373)||(11349484-11349542)
chr2 (285-342)||(29957939-29957997)
chr2 (337-423)||(30729662-30729748)
chr2 (351-423)||(6589674-6589746)
[»] chr8 (49 HSPs)
chr8 (315-423)||(20385609-20385717)
chr8 (315-423)||(30711996-30712103)
chr8 (315-423)||(30719773-30719880)
chr8 (316-422)||(30710897-30711003)
chr8 (282-423)||(34177215-34177357)
chr8 (315-423)||(20386709-20386817)
chr8 (322-423)||(13186345-13186446)
chr8 (322-423)||(1425094-1425195)
chr8 (350-423)||(8316694-8316767)
chr8 (322-423)||(22915430-22915531)
chr8 (322-423)||(36928762-36928863)
chr8 (350-423)||(38862877-38862950)
chr8 (353-423)||(36186142-36186212)
chr8 (350-423)||(12198991-12199064)
chr8 (350-423)||(12443419-12443492)
chr8 (350-423)||(23698350-23698423)
chr8 (281-373)||(35634341-35634434)
chr8 (350-423)||(35756896-35756969)
chr8 (350-423)||(38955986-38956059)
chr8 (350-423)||(39071956-39072028)
chr8 (268-423)||(2535781-2535937)
chr8 (278-373)||(15230170-15230266)
chr8 (353-423)||(4994698-4994768)
chr8 (271-408)||(7294157-7294295)
chr8 (278-423)||(25124802-25124948)
chr8 (350-423)||(12272959-12273032)
chr8 (322-423)||(23663586-23663687)
chr8 (322-423)||(40318005-40318106)
chr8 (285-408)||(34176497-34176621)
chr8 (285-423)||(2534736-2534875)
chr8 (324-423)||(7295215-7295314)
chr8 (353-423)||(34685575-34685644)
chr8 (283-423)||(10445579-10445720)
chr8 (280-320)||(15230076-15230116)
chr8 (278-373)||(37542464-37542560)
chr8 (324-423)||(34061616-34061715)
chr8 (283-373)||(42945205-42945296)
chr8 (283-373)||(44664752-44664843)
chr8 (278-320)||(21432932-21432974)
chr8 (283-320)||(27500233-27500270)
chr8 (277-373)||(39474637-39474733)
chr8 (278-373)||(6471781-6471877)
chr8 (286-373)||(41353820-41353908)
chr8 (278-373)||(42945353-42945449)
chr8 (278-373)||(44664599-44664695)
chr8 (369-423)||(33357539-33357593)
chr8 (322-423)||(11674949-11675050)
chr8 (285-373)||(11761931-11762020)
chr8 (322-423)||(31608799-31608900)
[»] chr1 (61 HSPs)
chr1 (284-423)||(46899102-46899242)
chr1 (284-423)||(46899847-46899987)
chr1 (278-423)||(5734952-5735098)
chr1 (323-423)||(47999164-47999264)
chr1 (322-423)||(6367848-6367949)
chr1 (322-423)||(183262-183363)
chr1 (350-423)||(1103775-1103848)
chr1 (322-423)||(26024678-26024779)
chr1 (322-423)||(48779405-48779506)
chr1 (322-423)||(49723012-49723113)
chr1 (322-424)||(42248757-42248859)
chr1 (322-423)||(1841745-1841845)
chr1 (350-423)||(4960823-4960896)
chr1 (350-423)||(13914109-13914182)
chr1 (322-423)||(30711613-30711714)
chr1 (271-423)||(32132345-32132498)
chr1 (322-423)||(32917546-32917647)
chr1 (350-423)||(36694323-36694396)
chr1 (350-423)||(36710424-36710497)
chr1 (350-423)||(40210411-40210484)
chr1 (283-373)||(7371381-7371472)
chr1 (282-423)||(5734051-5734192)
chr1 (350-423)||(17661893-17661965)
chr1 (354-423)||(37578233-37578302)
chr1 (260-423)||(35040835-35040999)
chr1 (350-423)||(7821268-7821340)
chr1 (350-423)||(24009616-24009689)
chr1 (350-423)||(43759136-43759209)
chr1 (278-373)||(8898608-8898704)
chr1 (278-373)||(35038546-35038642)
chr1 (278-373)||(40714535-40714631)
chr1 (315-383)||(42533092-42533160)
chr1 (353-423)||(41099050-41099120)
chr1 (278-423)||(49955388-49955534)
chr1 (350-423)||(35473672-35473745)
chr1 (354-410)||(19017683-19017739)
chr1 (278-373)||(28324895-28324991)
chr1 (278-373)||(31058296-31058392)
chr1 (311-423)||(34849052-34849164)
chr1 (315-423)||(34850344-34850452)
chr1 (319-423)||(48691189-48691293)
chr1 (280-374)||(13295225-13295320)
chr1 (283-373)||(49955591-49955682)
chr1 (285-423)||(17691260-17691398)
chr1 (286-320)||(20760752-20760786)
chr1 (322-408)||(23209417-23209503)
chr1 (283-320)||(8898761-8898798)
chr1 (283-320)||(17189099-17189136)
chr1 (354-423)||(19322933-19323002)
chr1 (354-423)||(19323210-19323279)
chr1 (288-320)||(30326641-30326673)
chr1 (285-320)||(50062348-50062383)
chr1 (288-373)||(45750091-45750177)
chr1 (322-383)||(14879257-14879318)
chr1 (322-423)||(24905208-24905309)
chr1 (283-320)||(28325048-28325085)
chr1 (322-423)||(34464490-34464591)
chr1 (350-383)||(35152657-35152690)
chr1 (350-383)||(40772786-40772819)
chr1 (283-320)||(45749987-45750024)
chr1 (315-423)||(13300183-13300291)
[»] chr6 (35 HSPs)
chr6 (315-423)||(681007-681115)
chr6 (284-423)||(13379729-13379869)
chr6 (289-423)||(20651899-20652034)
chr6 (315-423)||(679907-680015)
chr6 (284-423)||(20651051-20651191)
chr6 (322-423)||(11434843-11434944)
chr6 (322-423)||(21627754-21627855)
chr6 (322-423)||(30337704-30337805)
chr6 (322-423)||(30726045-30726146)
chr6 (322-423)||(30804147-30804248)
chr6 (322-423)||(33517820-33517921)
chr6 (350-423)||(12080950-12081023)
chr6 (315-423)||(8090206-8090314)
chr6 (356-423)||(3059576-3059643)
chr6 (353-423)||(11393121-11393191)
chr6 (267-423)||(8089484-8089641)
chr6 (322-423)||(17734237-17734338)
chr6 (350-423)||(33647265-33647338)
chr6 (278-373)||(31407117-31407213)
chr6 (278-423)||(22503013-22503159)
chr6 (317-423)||(26463220-26463326)
chr6 (278-373)||(15913787-15913883)
chr6 (315-423)||(28498304-28498412)
chr6 (317-423)||(15116513-15116619)
chr6 (278-373)||(7160895-7160991)
chr6 (278-373)||(7905482-7905578)
chr6 (315-423)||(12407549-12407657)
chr6 (278-373)||(21836122-21836217)
chr6 (278-320)||(12065365-12065407)
chr6 (315-373)||(29810715-29810773)
chr6 (315-423)||(12408450-12408558)
chr6 (283-373)||(21836274-21836365)
chr6 (283-373)||(22502865-22502956)
chr6 (283-320)||(7905388-7905425)
chr6 (283-320)||(31407023-31407060)
[»] chr5 (51 HSPs)
chr5 (268-423)||(11741748-11741904)
chr5 (322-423)||(6301584-6301685)
chr5 (322-423)||(21265184-21265285)
chr5 (350-423)||(5994203-5994276)
chr5 (322-423)||(6301829-6301930)
chr5 (322-423)||(11762003-11762104)
chr5 (350-423)||(14194464-14194537)
chr5 (322-423)||(16156896-16156997)
chr5 (322-423)||(28269463-28269564)
chr5 (322-423)||(38475074-38475175)
chr5 (322-423)||(39453585-39453686)
chr5 (284-423)||(21257408-21257548)
chr5 (322-423)||(186705-186806)
chr5 (322-423)||(6150706-6150807)
chr5 (322-423)||(11047723-11047823)
chr5 (322-423)||(17202685-17202786)
chr5 (350-423)||(19892349-19892422)
chr5 (322-423)||(20814177-20814277)
chr5 (350-423)||(27587429-27587502)
chr5 (322-423)||(29646403-29646504)
chr5 (350-423)||(35920269-35920342)
chr5 (322-423)||(43159100-43159201)
chr5 (347-423)||(37991240-37991316)
chr5 (353-423)||(35512431-35512501)
chr5 (322-423)||(3528914-3529015)
chr5 (322-423)||(5024060-5024161)
chr5 (350-423)||(8322718-8322791)
chr5 (354-423)||(13963147-13963216)
chr5 (354-423)||(16083261-16083330)
chr5 (322-423)||(32242528-32242628)
chr5 (324-423)||(11740728-11740827)
chr5 (265-320)||(22870363-22870417)
chr5 (357-423)||(19517928-19517994)
chr5 (322-423)||(28770910-28771011)
chr5 (278-373)||(20153157-20153253)
chr5 (353-421)||(27937096-27937164)
chr5 (350-423)||(38442381-38442454)
chr5 (358-423)||(42265776-42265841)
chr5 (280-367)||(22869702-22869790)
chr5 (322-393)||(13362298-13362369)
chr5 (278-320)||(17544287-17544329)
chr5 (283-320)||(17544193-17544230)
chr5 (283-320)||(20153063-20153100)
chr5 (283-320)||(22298687-22298724)
chr5 (353-409)||(10684255-10684311)
chr5 (359-423)||(20840760-20840824)
chr5 (353-393)||(24547261-24547301)
chr5 (364-423)||(18247404-18247463)
chr5 (291-373)||(33871590-33871673)
chr5 (286-320)||(21287904-21287938)
chr5 (352-393)||(37992604-37992645)
[»] scaffold0031 (1 HSPs)
scaffold0031 (326-423)||(69255-69352)
[»] scaffold0020 (1 HSPs)
scaffold0020 (322-423)||(139927-140028)
[»] scaffold0775 (2 HSPs)
scaffold0775 (285-423)||(5003-5142)
scaffold0775 (286-423)||(6227-6365)
[»] scaffold0005 (1 HSPs)
scaffold0005 (350-423)||(37605-37678)
[»] scaffold0707 (1 HSPs)
scaffold0707 (350-423)||(6393-6466)
[»] scaffold0328 (2 HSPs)
scaffold0328 (278-423)||(11379-11525)
scaffold0328 (283-373)||(11231-11322)
[»] scaffold0075 (1 HSPs)
scaffold0075 (322-423)||(14470-14571)
[»] scaffold0771 (1 HSPs)
scaffold0771 (280-423)||(961-1105)
[»] scaffold0128 (1 HSPs)
scaffold0128 (287-423)||(19898-20035)
[»] scaffold0388 (2 HSPs)
scaffold0388 (286-373)||(12486-12574)
scaffold0388 (283-320)||(12384-12421)
[»] scaffold0006 (2 HSPs)
scaffold0006 (278-373)||(221881-221976)
scaffold0006 (283-373)||(222033-222124)
[»] scaffold0220 (1 HSPs)
scaffold0220 (315-373)||(24625-24683)
[»] scaffold0042 (1 HSPs)
scaffold0042 (288-373)||(12029-12115)
[»] scaffold0599 (1 HSPs)
scaffold0599 (288-373)||(2484-2570)
[»] scaffold0008 (1 HSPs)
scaffold0008 (315-373)||(239830-239888)
[»] scaffold0007 (1 HSPs)
scaffold0007 (354-423)||(2059-2128)


Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 4 - 423
Target Start/End: Complemental strand, 13384962 - 13384543
Alignment:
Q  4 caattgagcttttgagacaaagtggaattgatttcaggaagaataatcaagatggtatcgatgctaggcgtttcggtgagcttttgatgtcatctgagat 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13384962 caattgagcttttgagacaaagtggaattgatttcaagaagaataatcaagatggtatcgatgctaggcgtttcggtgagcttttgatgtcatctgggat 13384863  T
Q  104 tgttttgaatgataatgttcattggataaattttcacagtggatatgattttggttatttgtggcggattaatgagttttggattgagaagttgaagttt 203  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13384862 tgttttgaatgataatgctcattggataacttttcatagtggatatgattttggttattt-tggcggattaatgagttttggattgagaagttgaagttt 13384764  T
Q  204 actacatcaaaattgagaattgtttattctggattctaggttcagatcattctgagttcataggaagaagaagaatgatgagggtatttttgtccattcc 303  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  13384763 actacttcgaaattgagaattgtttattctggattctaggttcagatcgttctgggttcataggaagaagaaggatgatgagggtatttttgtccattcc 13384664  T
Q  304 catgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattag 402  Q
    |||||||||||| ||||  | |||| ||| | ||||||| || ||  | |||||||||||||||| ||||| | |||||||  |||||||| || |||||    
T  13384663 catgtcattttgttaatttgatgacatgggagtaattaagtgagtgtagggacgaaattttaaatgattaacgtttgcaagggtagtttgctaggattag 13384564  T
Q  403 cgaatacatggaccaattttt 423  Q
    ||| |||| ||||||| ||||    
T  13384563 cgattacagggaccaaatttt 13384543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 266 - 423
Target Start/End: Original strand, 18087568 - 18087725
Alignment:
Q  266 ggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaatttta 364  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| |||||| | |||| ||||||||    
T  18087568 ggaaaaagaagaa-gatgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtcattaagtgggttaagggacaaaatttta 18087666  T
Q  365 aataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||| |||||| |||||||| ||| ||||| || |||||||| ||||  |||||||||||    
T  18087667 aatgattaataattgcaaggctattttgcaaggattagcgattacagtgaccaattttt 18087725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 17885770 - 17885669
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | |||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||| ||||||| ||||||||||    
T  17885770 agtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagagaatacagggaccaattt 17885671  T
Q  422 tt 423  Q
    ||    
T  17885670 tt 17885669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 17102275 - 17102376
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  17102275 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgctaggattagcgaatacatggaccaattt 17102374  T
Q  422 tt 423  Q
    ||    
T  17102375 tt 17102376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 267 - 374
Target Start/End: Complemental strand, 4226323 - 4226215
Alignment:
Q  267 gaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaa 365  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||  | |||||||||| | |||||| |||   ||||||||||||||||    
T  4226323 gaagaagaaggatgatgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaaccgggaagaaggacgaaattttaa 4226224  T
Q  366 ataattaat 374  Q
    || ||||||    
T  4226223 atgattaat 4226215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 423
Target Start/End: Original strand, 43124400 - 43124539
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||| | ||||||||||   | |||||||||||||||| |||||  | ||||||    
T  43124400 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 43124499  T
Q  384 tctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
      |||||||  || |||||||| |||| ||||||||||||    
T  43124500 ggtagtttgtaaggattagcgattacagggaccaattttt 43124539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 10936108 - 10936181
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  10936108 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccaattttt 10936181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 423
Target Start/End: Complemental strand, 18086471 - 18086330
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgca 381  Q
    ||||||||||||||||||| ||||| ||||||||||||  | |||| ||||| |||||||||||||  | |||||||||||||| | |||||| ||||||    
T  18086471 gagggtatttttgtccatttccatgccattttgctaatttgatgacatggcagtaattaactgggtcaagggacgaaattttaagtgattaataattgca 18086372  T
Q  382 agtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    || ||| ||||| || |||| ||  |||| ||||||||||||    
T  18086371 aggctaatttgcaaggattatcgtttacagggaccaattttt 18086330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 27991994 - 27992095
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  27991994 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 27992093  T
Q  422 tt 423  Q
    ||    
T  27992094 tt 27992095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 423
Target Start/End: Complemental strand, 33808505 - 33808364
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgca 381  Q
    ||||||||||||||||||||||||  ||||||||||||  | ||||| ||||   |||||||||||  | |||||||||||||||| ||||| || ||||    
T  33808505 gagggtatttttgtccattcccatcccattttgctaatttgatgacggggcagcgattaactgggtcaatggacgaaattttaaatgattaaagaatgca 33808406  T
Q  382 agtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    || ||| ||||| || |||||||||||||  |||||||||||    
T  33808405 agactaatttgcaaggattagcgaatacagagaccaattttt 33808364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 259 - 423
Target Start/End: Complemental strand, 47945554 - 47945398
Alignment:
Q  259 gttcataggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacga 357  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||  | ||| |||||  | ||||| ||         ||||    
T  47945554 gttcaaaggaagaagaaggatgatgagggtatttttgtccattcctatgccattttgttaatttgatgatgtggcggtcattaagtg---------acga 47945464  T
Q  358 aattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| ||||||||||||||  ||||||||| || ||||||||||||||| ||||||||||    
T  47945463 aattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatgaaccaattttt 47945398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 259 - 423
Target Start/End: Complemental strand, 47950984 - 47950828
Alignment:
Q  259 gttcataggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacga 357  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||  | ||| |||||  | ||||| ||         ||||    
T  47950984 gttcaaaggaagaagaaggatgatgagggtatttttgtccattcctatgccattttgttaatttgatgatgtggcggtcattaagtg---------acga 47950894  T
Q  358 aattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| ||||||||||||||  ||||||||| || ||||||||||||||| ||||||||||    
T  47950893 aattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatgaaccaattttt 47950828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 27396737 - 27396670
Alignment:
Q  356 gaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  27396737 gaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatggaccaattttt 27396670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 40380000 - 40380071
Alignment:
Q  352 ggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||| ||||||||||||||| ||||||||| || ||| ||||||||||||||||||||||    
T  40380000 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatacatggaccaattttt 40380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 2640320 - 2640219
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||| ||||| || ||||||||||||| | ||||||||    
T  2640320 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacaggtaccaattt 2640221  T
Q  422 tt 423  Q
    ||    
T  2640220 tt 2640219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 24389099 - 24389172
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| ||||||||||||||  ||||||||| || ||||||||||||||||||||||||||    
T  24389099 aaggacaaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatggaccaattttt 24389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 48788911 - 48788844
Alignment:
Q  356 gaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  48788911 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 48788844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 422
Target Start/End: Original strand, 3914458 - 3914524
Alignment:
Q  356 gaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaatttt 422  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| |||||||||||    
T  3914458 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttt 3914524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 6253754 - 6253827
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| ||||||||||||||| || |||||| || ||||||||||||| ||||||||||||    
T  6253754 aaggactaaattttaaatgattaatgattgcaagacttgtttgcaaggattagcgaatacaaggaccaattttt 6253827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 19204744 - 19204845
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || || |||||||||||||||||||||||||||  ||||||||| || |||||||| |||||| ||||||||    
T  19204744 agtgacgtggcagtgattaaattggtcaaatgatgaaattttaaataattaatgattgcaaagctagtttgcaaggattagcgattacatgaaccaattt 19204843  T
Q  422 tt 423  Q
    ||    
T  19204844 tt 19204845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 28469124 - 28469051
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||| | ||||||||||||    
T  28469124 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatataaggaccaattttt 28469051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 42019707 - 42019638
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||| |||||||||| |||  ||||||||| || ||||||||||||||||||||||||||    
T  42019707 acgaaattttaaatgattaatgattacaaagctagtttgcaaggattagcgaatacatggaccaattttt 42019638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 45914711 - 45914614
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||| | |||||  |||   | |||||||||||||||| ||||||    
T  45914711 atgatgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaat 45914614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 5457186 - 5457294
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| | |||||||||| | | |||||||||||||||| |||||  |||| |||  || ||||| || |||| |||||||| |||    
T  5457186 gctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaacattgaaagggtaatttgcaaggattaacgaatacaagga 5457285  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  5457286 ccaattttt 5457294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 25628665 - 25628569
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||    
T  25628665 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 25628569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 324 - 423
Target Start/End: Complemental strand, 42362590 - 42362491
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| ||||||  |||||||||||| |||||||||||||||||| ||||| || ||||||  || ||||| || |||| |||||||| ||||||||||||    
T  42362590 tgacctggcaacgattaactgggttaaaggacgaaattttaaatgattaaagaatgcaagggtaatttgcaaggattaacgaatacaaggaccaattttt 42362491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 13386033 - 13386134
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||| ||||| | |||||||||||  |||||  ||||||||||| |||||  |||||||| ||||||||| || ||||||||||| | ||||||||||    
T  13386033 agtgacatggcagtgattaactgggtcaaaggataaaattttaaatgattaaacattgcaaggctagtttgcaaggattagcgaatatagggaccaattt 13386132  T
Q  422 tt 423  Q
    ||    
T  13386133 tt 13386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 47558228 - 47558175
Alignment:
Q  267 gaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||||||||||    
T  47558228 gaagaagaaggatgatgagggtatttttatccattcccatgacattttgctaat 47558175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 6571262 - 6571332
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||||||| |||||| |||||||| ||||||||| ||||||| ||| ||||| |||||||||    
T  6571262 aaggacgaaattttaaatgattaataattgcaaggctagtttgcaagaattaacgagtacat-gaccaattt 6571332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 12228575 - 12228476
Alignment:
Q  275 agaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||| |||| ||||||| ||||  | ||||||| || | ||||| |||||| || ||||||||||||||| |||||    
T  12228575 agaaagatgagggtatttttgtccattctcatgccattttgttaatttgatgacgtgacagtcattaagtgggttaaacgacgaaattttaaatgattaa 12228476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 17886778 - 17886877
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| | ||||| |||||  | |||||||||||||||| ||||||  |||||||  |||||||| || |||| |||||||||||| ||||||||    
T  17886778 tgacgtggcagtgattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggtagtttgcaaggattaacgaatacatggatcaattttt 17886877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 22871450 - 22871351
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| |||||| |||||||| || |||||| || |||||||| |||| ||| ||||||    
T  22871450 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaataattgcaagactggtttgcaaggattagcgattacagggatcaattt 22871351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 5456012 - 5455918
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||| |||| ||||||||||||  | ||| |||||| ||||||| |||||  | ||| |||||||||||| |||||    
T  5456012 gatgagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtaattaagtgggtgtagggatgaaattttaaatgattaa 5455918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 23058674 - 23058764
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||||||||||||| ||||||| ||||  | |||||||||| ||||||| | |||  || ||||||||||||||| |||||    
T  23058674 agggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtaattaagttggtcaaatgacgaaattttaaatgattaa 23058764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 32934587 - 32934629
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  32934587 atgacgagggtatttttgtccattcccatgtcattttgctaat 32934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 42618150 - 42618246
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||| |||||||||||||||||||| ||||||||||||  | ||||||| || | ||||| | |||  |||||||||||||||||| |||||    
T  42618150 atgacgaggatatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 42618246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 12644036 - 12644143
Alignment:
Q  268 aagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaa 366  Q
    |||| |||| |||||||||| |||||||| ||||| |||| ||||||||||||  | |||||||||| | |||||| |||   | |||||||||||||||    
T  12644036 aagatgaaggatgatgagggcatttttgttcattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaattttaaa 12644135  T
Q  367 taattaat 374  Q
    | ||||||    
T  12644136 tgattaat 12644143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 423
Target Start/End: Original strand, 18855902 - 18856041
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||||| ||||||||  |||||||||||  | ||||||| || | ||||| |||||| | |||||||||||||||| |||||   |||||||    
T  18855902 gggtatttttgtcctttcccatgctattttgctaatttgatgacgtgtcagtcattaagtgggttaagggacgaaattttaaatgattaaactttgcaag 18856001  T
Q  384 tctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
      || ||||| |  |||| ||| |||| ||||||||||||    
T  18856002 ggtaatttgccaagattaacgattacagggaccaattttt 18856041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 32688462 - 32688565
Alignment:
Q  281 atgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattg 379  Q
    ||||||||||||||||| ||| |||||  |||||||||||  | |||||||||| | ||||| |||||  | |||||||||||||||| ||||||  |||    
T  32688462 atgagggtatttttgtctatttccatgcaattttgctaatttgatgacgtggcagttattaagtgggtcaagggacgaaattttaaatgattaatatttg 32688561  T
Q  380 caag 383  Q
    ||||    
T  32688562 caag 32688565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 47558983 - 47559022
Alignment:
Q  281 atgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  47558983 atgagggtatttttgtccatttccatgtcattttgctaat 47559022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 10600188 - 10600230
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  10600188 atgacgagggtatttttgtccattcccatgccattttgctaat 10600230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 423
Target Start/End: Complemental strand, 32068278 - 32068137
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgca 381  Q
    |||||||||||||||| |||||||| ||||||||||||  | |||| ||||| | ||||| | |||  ||| |||||||||||||| |||||  | ||||    
T  32068278 gagggtatttttgtcctttcccatgccattttgctaatttgatgacttggcattgattaagttggtcaaagtacgaaattttaaatgattaaacaatgca 32068179  T
Q  382 agtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||  ||  |||| || |||||||| |||| |||| |||||||    
T  32068178 agggtaaattgccaggattagcgattacaaggactaattttt 32068137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 42618093 - 42618056
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  42618093 gagggtatttttgtccattcccatgccattttgctaat 42618056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 42731705 - 42731806
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| |||||| |||||||  |||| |||| || ||||||| ||| | ||| ||||||    
T  42731705 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaataattgcaaagctagcttgcaaggattagcggatatagggatcaattt 42731804  T
Q  422 tt 423  Q
    ||    
T  42731805 tt 42731806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 43266514 - 43266651
Alignment:
Q  287 gtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtc 385  Q
    |||||||||||||||| |||||||||||||||||  | |||| | | | | ||||| | |||  |||||||||||||||||| |||||  | ||||||      
T  43266514 gtatttttgtccattctcatgtcattttgctaatttgatgacttagtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaaggg 43266613  T
Q  386 tagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||  |||  ||||||||||| ||||||||| |||||||    
T  43266614 taaattgtcagaattagcgattacatggactaattttt 43266651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 23058614 - 23058574
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  23058614 gatgagtgtatttttgtccattcccatgacattttgctaat 23058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 32068335 - 32068431
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||| |||||||| ||||||||| ||||||||||||  | |||||||||| | ||||| | |||  || ||||||||||||||| |||||    
T  32068335 atgacgagggtctttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaa 32068431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 46205548 - 46205644
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| |||||| |||||  | |||||||  | | ||||| | |||  |||||||||||||||||| |||||    
T  46205548 atgacgagggtatttttgtccattcccatgccattttcctaatttgatgacgtgatagtgattaagttggtcaaaggacgaaattttaaatgattaa 46205644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 25628722 - 25628813
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||| ||||||||||||||||| ||||||||||||  | |||| || || | ||||| | |||  |||||||||||||||||| |||||    
T  25628722 gagggtagttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 25628813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 32053251 - 32053184
Alignment:
Q  356 gaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| ||||||||||||||| ||||||||| || |||| || ||| | ||||| ||||||    
T  32053251 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattatcgtatatagggaccgattttt 32053184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 32298869 - 32298818
Alignment:
Q  372 aatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| ||||||||| || ||||||||||||| |||||| |||||    
T  32298869 aatgattgcaagactagtttgcaaggattagcgaatacagggaccagttttt 32298818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 32934530 - 32934439
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||| ||| ||||||||||||  | |||| ||| | | ||||| | |||  |||||||||||||||||| |||||    
T  32934530 gagggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 32934439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 25453313 - 25453219
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||| |||||||||||||||||||||| | ||||||||||  | |||| ||| | | ||||| | |||  |||||||||||||||||| |||||    
T  25453313 gatgacggtatttttgtccattcccatgcctttttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 25453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 25453367 - 25453409
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||| |||||||||||||||||||| ||||||||||||    
T  25453367 atgacgaggatatttttgtccattcccatgccattttgctaat 25453409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 42363671 - 42363713
Alignment:
Q  321 cagtgacgtggcaataattaactgggttcaaggacgaaatttt 363  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||    
T  42363671 cagtgacgtggcaatcattaaatgggttcagggacgaaatttt 42363713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 47946792 - 47946830
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttg 392  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  47946792 acgaaattttaaataattaatgattgcaagactaatttg 47946830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 47952222 - 47952260
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttg 392  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  47952222 acgaaattttaaataattaatgattgcaagactaatttg 47952260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 27138185 - 27138222
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  27138185 gagggtatttttgtccattcccatgttattttgttaat 27138222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 383
Target Start/End: Original strand, 37657164 - 37657197
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||||||||| |||||||||||||||    
T  37657164 aaggacgaaattttaaatgattaatgattgcaag 37657197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 3e-74; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 816907 - 816746
Alignment:
Q  4 caattgagcttttgagacaaagtggaattgatttcaggaagaataatcaagatggtatcgatgctaggcgtttcggtgagcttttgatgtcatctgagat 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  816907 caattgagcttttgagacaaagtggaattgatttcaagaagaataatgaagatggtatcgatgctaggcgtttcggtgagcttttgatgtcatctgggat 816808  T
Q  104 tgttttgaatgataatgttcattggataaattttcacagtggatatgattttggttatttgt 165  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  816807 tgttttgaatgataatgttcattggataacttttcatagtggatatgattttggttatttgt 816746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 423
Target Start/End: Complemental strand, 147500 - 147360
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| ||||||||||||||||||| ||||||||||||  | |||||||||| ||||||| |||| ||| |||| ||||||||||| ||||||||||||||    
T  147500 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagtaattaattgggctcagggacaaaattttaaattattaatgattgcaa 147401  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||||||| || ||||||||||||| ||||||||||||    
T  147400 gactagtttgcaaggattagcgaatacagggaccaattttt 147360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 284 - 423
Target Start/End: Original strand, 148002 - 148142
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| |||||||||||||  |||| ||||||||||||  | ||||||| || |||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  148002 agggcatttttgtccattttcatgccattttgctaatttgatgacgtgacagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaa 148101  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||||||| || |||| |||||| | ||||||||||||    
T  148102 gactagtttgcaaggattaacgaataaagggaccaattttt 148142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 24349816 - 24349715
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||||||||   | |||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  24349816 agtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 24349717  T
Q  422 tt 423  Q
    ||    
T  24349716 tt 24349715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 52909567 - 52909640
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||    
T  52909567 aaggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcgaatacatagaccaattttt 52909640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 323 - 423
Target Start/End: Original strand, 1179087 - 1179187
Alignment:
Q  323 gtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaatttt 422  Q
    |||| |||||| | ||||| | |||| ||||| |||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  1179087 gtgatgtggcagtgattaagttggttaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttt 1179186  T
Q  423 t 423  Q
    |    
T  1179187 t 1179187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 10781800 - 10781871
Alignment:
Q  352 ggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  10781800 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaattttt 10781871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 13058268 - 13058369
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  13058268 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 13058367  T
Q  422 tt 423  Q
    ||    
T  13058368 tt 13058369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 14802049 - 14802122
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||||| ||||||||||||    
T  14802049 aaggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcgaatacaaggaccaattttt 14802122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 37248491 - 37248592
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||| ||||| | |||  ||||||||||||| |||| ||||||||||||||| ||||||||| || |||||||| |||| ||||||||||    
T  37248491 agtgacgtggcaatgattaaattggtcaaaggacgaaatttaaaatgattaatgattgcaagactagtttgcaaggattagcgattacagggaccaattt 37248590  T
Q  422 tt 423  Q
    ||    
T  37248591 tt 37248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 46661200 - 46661301
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| |||||||||||| |||||  |||||| ||||||||||    
T  46661200 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcgaggattagtaaatacagggaccaattt 46661299  T
Q  422 tt 423  Q
    ||    
T  46661300 tt 46661301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 51692833 - 51692906
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  51692833 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 51692906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 423
Target Start/End: Original strand, 55867362 - 55867501
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    ||||||||||||| ||||| ||||||||||||||||  | |||||||||| | ||||||||||   | |||||||||||||||| |||||  | ||||||    
T  55867362 gggtatttttgtcaattccaatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 55867461  T
Q  384 tctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
      |||||||| || |||| ||| |||||||||||||||||    
T  55867462 ggtagtttgcaaggattaacgattacatggaccaattttt 55867501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 272 - 373
Target Start/End: Original strand, 32063571 - 32063673
Alignment:
Q  272 agaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataat 370  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||  | |||||||||||||||||| || || || ||||| |||||||||| ||    
T  32063571 agaaggatgatgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcaataattaagtgcgtgcagggacggaattttaaatgat 32063670  T
Q  371 taa 373  Q
    |||    
T  32063671 taa 32063673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 324 - 410
Target Start/End: Complemental strand, 54713769 - 54713683
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaataca 410  Q
    |||| ||||||| |||||| ||||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||    
T  54713769 tgacatggcaatgattaacagggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaataca 54713683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 7452089 - 7452190
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || |||||||||||||  |||||||||    
T  7452089 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaattt 7452188  T
Q  422 tt 423  Q
    ||    
T  7452189 tt 7452190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 10780827 - 10780754
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||| || |||||||||| |||||||||||||||    
T  10780827 aaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatgcatggaccaattttt 10780754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 10974436 - 10974363
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||| || |||||||||| |||||||||||||||    
T  10974436 aaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatgcatggaccaattttt 10974363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 34765494 - 34765421
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  34765494 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccgattttt 34765421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 37976295 - 37976194
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||| ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||| | |||| |||    
T  37976295 agtgacgtggcaatgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaagattagcgaatacaggaaccagttt 37976196  T
Q  422 tt 423  Q
    ||    
T  37976195 tt 37976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 50418810 - 50418709
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||| ||| |||| ||||||||||    
T  50418810 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgattacagggaccaattt 50418711  T
Q  422 tt 423  Q
    ||    
T  50418710 tt 50418709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 278 - 423
Target Start/End: Complemental strand, 27069097 - 27068951
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||  |    
T  27069097 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 27068998  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||||||| |||| |||| |||||||    
T  27068997 atgcaagggtaaattgccaggattagcgattacagggactaattttt 27068951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 35028109 - 35028039
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| | ||||||||||    
T  35028109 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaggaaccaattttt 35028039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 24350746 - 24350819
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||  ||||||||| || |||||||||| || ||||||||||||    
T  24350746 aaggacgaaattttaaatgattaatgattgcaaagctagtttgcaaggattagcgaatgcagggaccaattttt 24350819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 24711366 - 24711467
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| ||||||||||||||| ||||||||| || |||| |||  ||||||||||||||    
T  24711366 agtgacgtggcagtgattaaattggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgatgacatggaccaattt 24711465  T
Q  422 tt 423  Q
    ||    
T  24711466 tt 24711467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 36008958 - 36008885
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||| ||||||||||||    
T  36008958 aaggactaaattttaaatgattaatgattgcaaggctagtttgcaatgattagcgaatacagggaccaattttt 36008885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 43155671 - 43155570
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||| ||||||||||| ||||| ||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  43155671 agtgacgtggcagtgattaagttggtcaaatgactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 43155572  T
Q  422 tt 423  Q
    ||    
T  43155571 tt 43155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 44967211 - 44967110
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||  || |||||||||||||  |||||||||    
T  44967211 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaatacagagaccaattt 44967112  T
Q  422 tt 423  Q
    ||    
T  44967111 tt 44967110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 49879321 - 49879248
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||| | |||| ||||||||||||    
T  49879321 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaattacagggaccaattttt 49879248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 39539210 - 39539305
Alignment:
Q  328 gtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| | |||||||||||  |||||||||||||||||| ||||| || |||||| ||| ||||| ||||||| ||| ||||| |||||||||||    
T  39539210 gtggcagtcattaactgggtcaaaggacgaaattttaaatgattaaagaatgcaaggctaatttgcaagaattaacgattacattgaccaattttt 39539305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 11108161 - 11108227
Alignment:
Q  357 aaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||||||    
T  11108161 aaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacaaggatcaattttt 11108227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Complemental strand, 27891771 - 27891625
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| |||| |||||||||||||||||||||||||||||||||  | ||||||| || | ||||| | |||  |||||||||||||||||| |||||  |    
T  27891771 atgacgaggatatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 27891672  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| | ||||||||| |||| |||| |||||||    
T  27891671 atgcaagggtaaattgccaaaattagcgattacagggactaattttt 27891625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 40316904 - 40316946
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40316904 atgatgagggtatttttgtccattcccatgtcattttgctaat 40316946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 40326978 - 40327020
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40326978 atgatgagggtatttttgtccattcccatgtcattttgctaat 40327020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 5369181 - 5369254
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||| || |||| ||||| || ||||||||||||    
T  5369181 aaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatgcagggaccaattttt 5369254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 15507815 - 15507714
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    ||||||||| |||| ||||| | |||  ||||||||||||| |||| | ||||||||||| | ||||||||| || ||||||||||| | ||||||||||    
T  15507815 agtgacgtgacaatgattaagttggtcaaaggacgaaatttgaaatgaataatgattgcacgactagtttgcaaggattagcgaatatagggaccaattt 15507716  T
Q  422 tt 423  Q
    ||    
T  15507715 tt 15507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 52573415 - 52573319
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||||||||||||||||| |||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||    
T  52573415 atgacgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 52573319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 54858747 - 54858651
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||  |||||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||    
T  54858747 atgatgagggtatttttgtctgttcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 54858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 423
Target Start/End: Original strand, 18831637 - 18831704
Alignment:
Q  356 gaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| |||||||||||||||  |||||||| |  ||||||||||||| ||||||||||||    
T  18831637 gaaattttaaatgattaatgattgcaaggttagtttgcaatgattagcgaatacagggaccaattttt 18831704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 30641711 - 30641609
Alignment:
Q  271 aagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataa 369  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||||||  | ||||||| || ||||||| | |||  | |||||||||||||||| |    
T  30641711 aagaaggatgatgagggtaattttgtccattcccatgacattttgctaatttgatgacgtgacagtaattaagt-ggtgtagggacgaaattttaaatga 30641613  T
Q  370 ttaa 373  Q
    ||||    
T  30641612 ttaa 30641609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 50504007 - 50503916
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  ||||||| |||||||||| |||||    
T  50504007 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacggaattttaaatgattaa 50503916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 10408128 - 10408274
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| |||||||||||||||||||| ||| |||||||||||||  | ||| |||||| | ||||| | |||  |||||||||||||||||| |||||  |    
T  10408128 atgacgagggtatttttgtccattctcatatcattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 10408227  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||||||| |||| |||| |||||||    
T  10408228 atgcaagggtaaattgccaggattagcgattacagggactaattttt 10408274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 22718178 - 22718220
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  22718178 atgacgagggtatttttgtccattcccatgtcattttgctaat 22718220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 50504064 - 50504106
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  50504064 atgacgagggtatttttgtccattcccatgtcattttgctaat 50504106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 53129616 - 53129547
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaatttttt 424  Q
    |||||||||||||| ||||||||||||||| ||||||||  || |||||| ||||||| ||||||||||||    
T  53129616 acgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcaaatacat-gaccaatttttt 53129547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 17356067 - 17355966
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| |||||||| |||||| ||||||||| |  |||||||||||||   ||||||||    
T  17356067 agtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgaatgcaagactagtttgcaaagattagcgaatacagcaaccaattt 17355968  T
Q  422 tt 423  Q
    ||    
T  17355967 tt 17355966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 383
Target Start/End: Complemental strand, 54434331 - 54434270
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||| | |||||||||| | ||||||| |||||||||| |||||||||||||||    
T  54434331 agtgacgtggcagtgattaactgggatgaaggacgtaattttaaatgattaatgattgcaag 54434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 56015929 - 56016034
Alignment:
Q  318 aatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggacca 417  Q
    |||||||||||||||| | |||||||| | | |||||||||||||||||| ||||| | ||||| |   | ||||| | ||||||||| || ||||||||    
T  56015929 aatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaacgtttgcagggacaatttgccataattagcgattatatggacca 56016028  T
Q  418 attttt 423  Q
    ||||||    
T  56016029 attttt 56016034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 51859594 - 51859498
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||||||||||||||||| |||| ||||||||||||  | ||| |||||| | ||||| | |||  |||||||||||||||||| |||||    
T  51859594 atgacgagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 51859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 23455609 - 23455644
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||||||||||||||    
T  23455609 gggtatttttgtccattcccatgtcattttgctaat 23455644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 22987038 - 22986996
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  22987038 atgacgagggtatttttgtctattcccatgtcattttgctaat 22986996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 23455137 - 23455099
Alignment:
Q  282 tgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  23455137 tgagggtatttttgtccattcccatgccattttgctaat 23455099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 23613599 - 23613665
Alignment:
Q  357 aaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||| |||| |||||||||| ||| ||||| || ||||||||||||| ||| ||||||||    
T  23613599 aaattttaaatgattagtgattgcaagactaatttgcaaggattagcgaatacagggatcaattttt 23613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 423
Target Start/End: Original strand, 54858795 - 54858945
Alignment:
Q  274 aagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataatta 372  Q
    ||||| || |||||||||||||||||||| |||| ||||||||||||  | |||| ||| | | ||||| | |||  |||||||||||||||||| ||||    
T  54858795 aagaaagacgagggtatttttgtccattcacatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgatta 54858894  T
Q  373 atgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |  | ||||||  ||  |||| || |||| ||| ||||||||| |||||||    
T  54858895 aacaatgcaagggtaaattgccaggattaacgattacatggactaattttt 54858945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 27069154 - 27069191
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  27069154 gagggtatttttgtccattcccatgccattttgctaat 27069191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 39666958 - 39666921
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  39666958 gagggtatttttgtccattcccatgccattttgctaat 39666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 54086837 - 54086736
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| |||||||||| |||| |||| ||   || |||||||||||||  |||||||||    
T  54086837 agtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattacaagactagctttgaaggattagcgaatacagagaccaattt 54086738  T
Q  422 tt 423  Q
    ||    
T  54086737 tt 54086736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 10408074 - 10408034
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  10408074 gatgagggtatttttgtccatttccatgccattttgctaat 10408034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 39701096 - 39701000
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||| |||||||||||||||||| ||||||||||||  | |||||||  | | ||||| | |||  ||||| ||||||||||||||||||    
T  39701096 atgacgagggtgtttttgtccattcccatgccattttgctaatttgatgacgtgagagtgattaagttggtcaaaggatgaaattttaaataattaa 39701000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 423
Target Start/End: Original strand, 24411680 - 24411735
Alignment:
Q  368 aattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||||  |||||||| || ||||||||||||| ||| ||||||||    
T  24411680 aattaatgattgcaaggttagtttgcaaggattagcgaatacagggatcaattttt 24411735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 39538262 - 39538135
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgca 381  Q
    |||||||||||||| || |  |||||||||||||||||  | ||||||| ||   ||||| | | || | |||||||||||||||| ||||| || ||||    
T  39538262 gagggtatttttgttcaattacatgtcattttgctaatttgatgacgtgacagcgattaattagattaagggacgaaattttaaatgattaaagaatgca 39538163  T
Q  382 agtctagtttgcgagaattagcgaatac 409  Q
    || ||| ||| | |||||||||||||||    
T  39538162 agactaattttcaagaattagcgaatac 39538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 40388392 - 40388443
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||| |||||||| | ||| |||||||||||||||| |||||    
T  40388392 agtgacgtggcaatgattaactgtgatcagggacgaaattttaaatgattaa 40388443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 11524188 - 11524230
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||| |||||||||||||||||||| ||||||||||||    
T  11524188 atgacgaggatatttttgtccattcccatgccattttgctaat 11524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 423
Target Start/End: Original strand, 39667023 - 39667161
Alignment:
Q  286 ggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagt 384  Q
    ||||||||||||||||| |||| ||||||||||||  | |||||||||  | ||||| | |||  || ||||||||||||||| |||||  | ||||||     
T  39667023 ggtatttttgtccattctcatgccattttgctaatttgatgacgtggcggtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgcaagg 39667122  T
Q  385 ctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     || ||| | || |||| ||| |||| ||||||||||||    
T  39667123 gtaatttaccaggattaacgattacagggaccaattttt 39667161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 45463312 - 45463354
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||||| |||||||||||||||||| ||||||||||||    
T  45463312 atgacgagggtgtttttgtccattcccatgccattttgctaat 45463354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 372
Target Start/End: Complemental strand, 55866255 - 55866201
Alignment:
Q  318 aatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataatta 372  Q
    |||||||||||||||| | |||||||||||||| |||| || |||||||| ||||    
T  55866255 aatcagtgacgtggcagttattaactgggttcagggaccaatttttaaatgatta 55866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 11524131 - 11524094
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  11524131 gagggtatttttgtctattcccatgccattttgctaat 11524094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 45463255 - 45463218
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||  |||||||||||    
T  45463255 gagggtatttttgtccattcccatgctattttgctaat 45463218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 53702098 - 53702159
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| |||||||||||||||    
T  53702098 agtgacgtggcattgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaag 53702159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 9731451 - 9731547
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||| ||||||||| |||||||||| ||||||||||||  | |||||||||| | ||||| |  ||  ||| |||||||||||||| |||||    
T  9731451 atgacgaggatatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaagttagtcaaagaacgaaattttaaatgattaa 9731547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 11446474 - 11446438
Alignment:
Q  260 ttcataggaagaagaagaatgatgagggtatttttgt 296  Q
    |||| |||||||||||| |||||||||||||||||||    
T  11446474 ttcaaaggaagaagaaggatgatgagggtatttttgt 11446438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 38813731 - 38813699
Alignment:
Q  288 tatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||| ||||||||||||||||||||||    
T  38813731 tatttttgtcaattcccatgtcattttgctaat 38813699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 52815844 - 52815808
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  52815844 agggtatttttgtcaattcccatgccattttgctaat 52815808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 4e-64; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 35716807 - 35716982
Alignment:
Q  4 caattgagcttttgagacaaagtggaattgatttcaggaagaataatcaagatggtatcgatgctaggcgtttcggtgagcttttgatgtcatctgagat 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || |||||||||| |||||||||||||||| |||    
T  35716807 caattgagcttttgagacaaagtggaattgatttcaagaagaataaa-aagatggtatcgatgcttggtgtttcggtgaccttttgatgtcatctgggat 35716905  T
Q  104 tgttttgaatgataatgttcattggataaattttcacagtggatatgattttggttatttgtggcggattaatgagt 180  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||  |||||||||||    
T  35716906 tgttttgaatgataatgttcattggataacttttcatagttgatatgattttggttatttgtggtagattaatgagt 35716982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 293 - 423
Target Start/End: Original strand, 41558138 - 41558269
Alignment:
Q  293 ttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagttt 391  Q
    ||||||||||||||  ||||||| ||||  | ||| |||||| |||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||    
T  41558138 ttgtccattcccataccattttgataatttgatgatgtggcagtaattaactgggctcaaggacgaaattttaaatgattaatgattgcaagactaattt 41558237  T
Q  392 gcgagaattagcgaatacatggaccaattttt 423  Q
    || || |||||||||||||||||  |||||||    
T  41558238 gcaaggattagcgaatacatggattaattttt 41558269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 19741065 - 19740964
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||| ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| |||| ||||||||||    
T  19741065 agtgacgtggcaatgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaattt 19740966  T
Q  422 tt 423  Q
    ||    
T  19740965 tt 19740964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 53757032 - 53757110
Alignment:
Q  345 ggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| |||||||||||||||||| |||||||||||||||  |||||||| || ||||||||||||||||||||||||||    
T  53757032 ggttaaaggacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacatggaccaattttt 53757110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 23458121 - 23458020
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| |||||| |||||||| ||||||||| || ||||||||||||| ||||||||||    
T  23458121 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaattattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 23458022  T
Q  422 tt 423  Q
    ||    
T  23458021 tt 23458020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 33689523 - 33689423
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  33689523 agtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatacat-gaccaattt 33689425  T
Q  422 tt 423  Q
    ||    
T  33689424 tt 33689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 36417802 - 36417729
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  36417802 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 36417729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 40758424 - 40758497
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||| |||||||||||    
T  40758424 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaattttt 40758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 36418002 - 36418075
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| | ||||||||||    
T  36418002 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaggaaccaattttt 36418075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 49023632 - 49023709
Alignment:
Q  84 cttttgatgtcatctgagattgttttgaatgataatgttcattggataaattttcacagtggatatgattttggttat 161  Q
    |||||||||||||| | |||||| ||||||||||||||||||||| | | |||||||||||| |||||||||||||||    
T  49023632 cttttgatgtcatcggggattgtgttgaatgataatgttcattgggttacttttcacagtggttatgattttggttat 49023709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 46475067 - 46475155
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaataca 410  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||    
T  46475067 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaataca 46475155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 3849147 - 3849072
Alignment:
Q  348 tcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||||| ||||||||||||| | ||||||||| || |||| |||||||| ||||||||||||    
T  3849147 tcaaggacgaaattttaaatgattaatgattgcagggctagtttgcaaggattaacgaatacagggaccaattttt 3849072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 373
Target Start/End: Original strand, 9368531 - 9368638
Alignment:
Q  267 gaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaa 365  Q
    ||||| |||||| ||||||||||||||||||||||| |||| ||||||| ||||  | |||||||||||| ||||| |||||| | | ||||||||||||    
T  9368531 gaagatgaagaaggatgagggtatttttgtccattctcatgccattttgttaatttgatgacgtggcaatcattaagtgggttaaggaacgaaattttaa 9368630  T
Q  366 ataattaa 373  Q
    || |||||    
T  9368631 atgattaa 9368638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 9367883 - 9367782
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| |||| | | |||||||||||||||| |||||| |||||||| ||||||||| || |||||||||||||  ||||| |||    
T  9367883 agtgacgtggcagtgattaattgggatgagggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgaatacagagaccatttt 9367784  T
Q  422 tt 423  Q
    ||    
T  9367783 tt 9367782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 41558140 - 41558049
Alignment:
Q  332 caataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||||  ||||||||||||||| |||||| ||||||||  || | ||| || ||||||||||||| | ||||||||||    
T  41558140 caataattaactgggttcactgacgaaattttaaatgattaataattgcaaggttaatgtgcaaggattagcgaatacaagtaccaattttt 41558049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Complemental strand, 3469387 - 3469241
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||  | ||||| | |||  |||||||||||||||||| |||||  |    
T  3469387 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggccgtgattaagttggtcaaaggacgaaattttaaatgattaaaca 3469288  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || ||||| || ||||||||| |||||||    
T  3469287 atgcaagggtaaattgccaggattagtgattacatggactaattttt 3469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 32717025 - 32717115
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaat 374  Q
    ||||||||||||||||||| ||||||||||||||||  | |||||||||| ||||||| ||||   | |||||||||||||||| ||||||    
T  32717025 gggtatttttgtccattcctatgtcattttgctaatttgatgacgtggcagtaattaattgggaagagggacgaaattttaaatgattaat 32717115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 40788659 - 40788805
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||  |||||  |    
T  40788659 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaaagattaaaca 40788758  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||||||| |||| |||| |||||||    
T  40788759 atgcaagagtaaattgccaggattagcgattacagggactaattttt 40788805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 6956442 - 6956345
Alignment:
Q  272 agaagaatgatgagggtatttttgtccattcccatgtcattttgctaa-tcagtgacgtggcaataatt-aactgggttcaaggacgaaattttaaat 367  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| |   |||||||||| ||||| || |||||  | ||||||||||||||||    
T  6956442 agaaggatgatgagggtatttttgtccattcccatgtcattttgttaattttatgacgtggcagtaattaaagtgggtgtagggacgaaattttaaat 6956345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 26463746 - 26463673
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||| || |||| |||||||| ||| ||||||||    
T  26463746 aaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattaccgaatacaaggatcaattttt 26463673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 42343045 - 42343118
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| |||||| |||||||| ||| ||||| |  ||||||||||||||||| ||||||||    
T  42343045 aaggacgaaattttaaatgattaatcattgcaagactaatttgcaaagattagcgaatacatggatcaattttt 42343118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 42855619 - 42855692
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||| |||||||||||| ||||| || |||||| ||||||||| || |||||||||||||||||| |||||||    
T  42855619 aaggatgaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatacatggactaattttt 42855692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 423
Target Start/End: Complemental strand, 13948965 - 13948821
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgatt 378  Q
    |||||||||||||||||||||||||||| ||||||||||||  | |||| || || | ||||| | |||  |||||||||||||||||| |||||  | |    
T  13948965 gatgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaat 13948866  T
Q  379 gcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||  ||  |||| |  |||||||| ||||||||| |||||||    
T  13948865 gcaagggtaaattgccaagattagcgattacatggactaattttt 13948821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 29118777 - 29118873
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||    
T  29118777 atgacgagggtatttttgtctattcccatgccattttgctaatgtgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 29118873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 29192894 - 29192948
Alignment:
Q  265 aggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  29192894 aggatgaagaaga-tgatgagggtatttttgtcaattcccatgtcattttgctaat 29192948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 35644033 - 35643942
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| |  ||  |||||||||||||||||| |||||    
T  35644033 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagtttgtcaaaggacgaaattttaaatgattaa 35643942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 35759029 - 35759084
Alignment:
Q  265 aggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||    
T  35759029 aggaagaagaaggaagatgagggtatttttgtccattctcatgccattttgctaat 35759084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 41422154 - 41422063
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||| || | ||||| | |||  || ||||||||||||||| |||||    
T  41422154 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 41422063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 1078729 - 1078627
Alignment:
Q  272 agaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataat 370  Q
    ||||| |||||||| |||||||||||||||||| || ||| ||||||||  | |||| || |||||||||| |||||  | |||||||||||||||| ||    
T  1078729 agaaggatgatgagagtatttttgtccattcccgtgccatcttgctaatttgatgacatgacaataattaaatgggtgtagggacgaaattttaaatgat 1078630  T
Q  371 taa 373  Q
    |||    
T  1078629 taa 1078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 3596348 - 3596390
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  3596348 atgacgagggtatttttgtccattcccatgtcattttgctaat 3596390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 322 - 408
Target Start/End: Original strand, 43384569 - 43384655
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaata 408  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| | ||||||||||||| ||||||||| || |||| ||||||    
T  43384569 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgactaatgattgcaaggctagtttgcaaggattaacgaata 43384655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 52032327 - 52032229
Alignment:
Q  276 gaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||  | |||||||| | | ||||| | |||  |||||||||||||||||| |||||    
T  52032327 gaatgacgagggtatttttgtccattcccatgccattttgttaatttgatgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 52032229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 49947035 - 49946990
Alignment:
Q  161 tttgtggcggattaatgagttttggattgagaagttgaagtttact 206  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  49947035 tttgtggcggattaattagttttgggttgagaagttgaagtttact 49946990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 52032383 - 52032420
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52032383 gagggtatttttgtccattcccatgtcattttgctaat 52032420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 25108374 - 25108482
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| | |||||||| | | |||||||||||||||||| ||||| | ||||| |   ||||||| || |||||| | |||| |||    
T  25108374 gctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaacgtttgcagggacagtttgccaggattagcaattacaggga 25108473  T
Q  415 ccaattttt 423  Q
    |||| ||||    
T  25108474 ccaaatttt 25108482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 32306611 - 32306515
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||| |||||||||||||||||| ||||||||||||||  | |||||||| | | ||||| | |||  |||||||||||||||||| |||||    
T  32306611 atgacgaggatatttttgtccattcccaagtcattttgctaatttgatgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 32306515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 40788605 - 40788565
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  40788605 gatgagggtatttttgtccattcccatgccattttgctaat 40788565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 43608717 - 43608765
Alignment:
Q  272 agaagaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  43608717 agaagaatgatgagggtatttttgtccatttccatgccatcttgctaat 43608765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 29118720 - 29118629
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||| || || | ||||| | |||  |||||||||||||||||| |||||    
T  29118720 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 29118629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 29192220 - 29192125
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatc-agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaat 374  Q
    |||||||||||||||||| |||| |||||||||||||||||  | |||||||||| | |||||  |||   | |||||||||||||||| ||||||    
T  29192220 gatgagggtatttttgtcaattctcatgtcattttgctaatttaatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaat 29192125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 45279204 - 45279239
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||||||||||||||    
T  45279204 gggtatttttgtccattcccatgtcattttgctaat 45279239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 10294748 - 10294706
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  10294748 atgatgagggtatttttgtacatttccatgtcattttgctaat 10294706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 32716432 - 32716394
Alignment:
Q  282 tgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  32716432 tgagggtatttttgtccattcccatgccattttgctaat 32716394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 3469444 - 3469481
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  3469444 gagggtatttttgtccattcccatgccattttgctaat 3469481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 41989510 - 41989571
Alignment:
Q  259 gttcataggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||| |||||||||||| | ||||| ||| ||||||||||||| |||| ||||||||||||    
T  41989510 gttcaaaggaagaagaaggaagatgaaggtgtttttgtccattctcatgccattttgctaat 41989571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 29686128 - 29686032
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||||||||| |||||||||||| ||||||||||||  | |||||||||| | || || | |||  ||| |||||||||||||| |||||    
T  29686128 atgacgagggtatttttctccattcccatgccattttgctaatttgatgacgtggcagtgatcaagttggtcaaagaacgaaattttaaatgattaa 29686032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 3850443 - 3850514
Alignment:
Q  352 ggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||  |||||||||||||   ||||||| | || |||| |||||||| ||||||||||||    
T  3850443 ggacgaaattttaaacgattaatgattgcagagctagtttccaaggattatcgaatacagggaccaattttt 3850514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 41988696 - 41988625
Alignment:
Q  352 ggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||| ||||||| ||||| || ||||||  || ||||| |||||||| ||||||| ||||||||||||    
T  41988696 ggacgaaaatttaaatgattaaagaatgcaagagtaatttgcaagaattagtgaatacagggaccaattttt 41988625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 53856357 - 53856444
Alignment:
Q  336 aattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||  |||||| || |||||||| |||||| |||||| |  | |||||| || ||||| ||||||| ||||||||||||    
T  53856357 aattaactgggtagaaggaccaatttttaaatgattaataattgcagggtttgtttgcaaggattagtgaatacaaggaccaattttt 53856444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 11910876 - 11910790
Alignment:
Q  288 tatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||||||||| ||||||||||||  | | |||||| | | ||||| | |||  |||||||||||||||||| |||||    
T  11910876 tatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 11910790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 37778518 - 37778608
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||| |||| |||| ||||||||||||  | |||||||||| | ||||| | |||  ||||| |||||||||||| |||||    
T  37778518 agggtatttttgtctattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaa 37778608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 423
Target Start/End: Complemental strand, 47551680 - 47551534
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||| ||||||||||| ||||| ||||||||||||  | ||| |||||| | ||||| | |||  ||||| |||||||||||| |||||  |    
T  47551680 atgacgagggtaattttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaaaca 47551581  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||||||| |||| |||| |||||||    
T  47551580 atgcaagggtaaattgccagtattagcgattacagggactaattttt 47551534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 10307619 - 10307656
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||  |||||||||||    
T  10307619 gagggtatttttgtccattcccatgcaattttgctaat 10307656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 29686185 - 29686222
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  29686185 gagggtatttttgtccatttccatgccattttgctaat 29686222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 36314440 - 36314339
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | ||| ||||||| ||||||||||| |||||  |||||||| |||  |||| || |||||| | |||| |||| |||||    
T  36314440 agtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaattt 36314341  T
Q  422 tt 423  Q
    ||    
T  36314340 tt 36314339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 48322519 - 48322418
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | ||| ||||||| ||||||||||| |||||  |||||||| |||  |||| || |||||| | |||| |||| |||||    
T  48322519 agtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaattt 48322420  T
Q  422 tt 423  Q
    ||    
T  48322419 tt 48322418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Complemental strand, 55052421 - 55052360
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| |||||||||||||||    
T  55052421 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaag 55052360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 32306669 - 32306705
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  32306669 agggtatttttgtccattcctatgccattttgctaat 32306705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 43105414 - 43105378
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  43105414 agggtatttttgtcaattcccatgccattttgctaat 43105378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 43998382 - 43998426
Alignment:
Q  276 gaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||| |||| ||||||||||||||| |||| ||||||||||||    
T  43998382 gaatgacgaggatatttttgtccattctcatggcattttgctaat 43998426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 8e-38; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 268 - 423
Target Start/End: Complemental strand, 6588880 - 6588724
Alignment:
Q  268 aagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaa 366  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||  | |||| ||||| | || ||||||||  |||||||||||||||||    
T  6588880 aagaagaaggatggtgagggtatttttgtccattcccatgccattttgctaatttgatgacctggcagtgatcaactgggtcaaaggacgaaattttaaa 6588781  T
Q  367 taattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||| || |||||| ||||||||| || ||||||||||||||||||||||||||    
T  6588780 tgattaaagaatgcaaggctagtttgcaaggattagcgaatacatggaccaattttt 6588724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 423
Target Start/End: Complemental strand, 25230311 - 25230143
Alignment:
Q  259 gttcataggaagaagaagaatgat---gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaagga 354  Q
    ||||| |||||||||||||| |||   |||||||||||||||||||| |||| |||||||| |||| | ||| |||||| |||||||||||| ||| |||    
T  25230311 gttcaaaggaagaagaagaaggatagtgagggtatttttgtccattcgcatgccattttgccaatctgatgatgtggcagtaattaactgggctcaggga 25230212  T
Q  355 cgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||| |||| | |||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  25230211 cgaaattttaaatgattagtaattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 25230143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 21370481 - 21370589
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||| | ||||||| |||| ||| |||||||||||||||| ||||||||||||||  ||||||||| || |||| ||||||||||||    
T  21370481 gctaatcagtgacgtggtagtaattaattgggctcagggacgaaattttaaattattaatgattgcaatgctagtttgcaaggattaacgaatacatgga 21370580  T
Q  415 ccaattttt 423  Q
     ||||||||    
T  21370581 tcaattttt 21370589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 44044263 - 44044155
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| ||||||| |||| ||| |||||||||||||||| |||||||||| ||||  |||||| | || ||||| ||||||| |||    
T  44044263 gctaatcagtgacgtggcagtaattaattgggctcagggacgaaattttaaatgattaatgattacaaggttagttttcaaggattagtgaatacaggga 44044164  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  44044163 ccaattttt 44044155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 44045290 - 44045389
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| | |||||||||| | | |||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  44045290 tgacgtggcagtgattaactgggatgagggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 44045389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 11163196 - 11163095
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  11163196 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaattt 11163097  T
Q  422 tt 423  Q
    ||    
T  11163096 tt 11163095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 13692534 - 13692607
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  13692534 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 13692607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 36480004 - 36480105
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| | ||||||||||    
T  36480004 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaattattaatgattgcaaggctagtttgcaaggattagcgaatatagggaccaattt 36480103  T
Q  422 tt 423  Q
    ||    
T  36480104 tt 36480105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 37895489 - 37895388
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  ||||| |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  37895489 agtgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 37895390  T
Q  422 tt 423  Q
    ||    
T  37895389 tt 37895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 39498565 - 39498666
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||  ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  39498565 agtgacgtggcagtgattaagttggtcaaaggattaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaattt 39498664  T
Q  422 tt 423  Q
    ||    
T  39498665 tt 39498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 44713909 - 44713836
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||| |||||||||||    
T  44713909 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacattgaccaattttt 44713836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 6658133 - 6658234
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||| ||| ||||||||| || ||||||||||||| ||||||||||    
T  6658133 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaatacagggaccaattt 6658232  T
Q  422 tt 423  Q
    ||    
T  6658233 tt 6658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 16099310 - 16099411
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||| ||||||| ||||||||||    
T  16099310 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacagggaccaattt 16099409  T
Q  422 tt 423  Q
    ||    
T  16099410 tt 16099411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 34448081 - 34448182
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||| | ||||||||||    
T  34448081 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatatagggaccaattt 34448180  T
Q  422 tt 423  Q
    ||    
T  34448181 tt 34448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 269 - 374
Target Start/End: Original strand, 25624337 - 25624443
Alignment:
Q  269 agaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaat 367  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| ||||  | ||| |||||| | |||||| ||||  | ||||||||||||||||    
T  25624337 agaagaaggatgatgagggtatttttgtccattcccatgccattttgttaatttgatgatgtggcagtgattaaccgggtagagggacgaaattttaaat 25624436  T
Q  368 aattaat 374  Q
     ||||||    
T  25624437 gattaat 25624443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 15848374 - 15848475
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| |||||||||||||||  ||||| || || ||||||||||||||  ||||||||    
T  15848374 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggttagttcgcaaggattagcgaatacataaaccaattt 15848473  T
Q  422 tt 423  Q
    ||    
T  15848474 tt 15848475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 36382441 - 36382514
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||  | ||||||||||||| ||||||||||||    
T  36382441 aaggacgaaattttaaatgattaacgattgcaagactagtttgcatggattagcgaatacagggaccaattttt 36382514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 36755402 - 36755475
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| || | ||||||||||||    
T  36755402 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattatagggaccaattttt 36755475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 39423801 - 39423902
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||| | ||| ||||||    
T  39423801 agtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatatagggatcaattt 39423900  T
Q  422 tt 423  Q
    ||    
T  39423901 tt 39423902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 423
Target Start/End: Original strand, 202587 - 202743
Alignment:
Q  268 aagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaa 366  Q
    ||||||||| ||||||| |||||||||||| |||| |||| ||||||||||||  | | |||||| | ||||||| |||||  | |||||||||||||||    
T  202587 aagaagaaggatgatgaaggtatttttgtctattctcatgccattttgctaatttgataacgtgggagtaattaagtgggtgtagggacgaaattttaaa 202686  T
Q  367 taattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | |||||    |||||| ||| ||||| || |||| ||| ||||||||| |||||||    
T  202687 tgattaaactctgcaaggctaatttgccaggattaacgattacatggacgaattttt 202743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 25231136 - 25231235
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| | ||||||||||   | |||||||||||||||| ||||| | |||||||  || ||||| || ||||||||||||||||||||||||||    
T  25231136 tgacgtggcagtcattaactgggacaagggacgaaattttaaatgattaaagtttgcaagggtaatttgctaggattagcgaatacatggaccaattttt 25231235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 25623473 - 25623378
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaat 374  Q
    |||||||||||||||||||||||||||| ||||||| ||||  | |||||||||| | |||||| ||||  | |||||||||||||||| ||||||    
T  25623473 gatgagggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtgattaaccgggtagagggacgaaattttaaatgattaat 25623378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 8710707 - 8710853
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | || || | |||  |||||||||||||||||| |||||  |    
T  8710707 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgataaagttggtcaaaggacgaaattttaaatgattaaaca 8710806  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||  || |||||||| ||||||||| |||||||    
T  8710807 atgcaagggtaaattgtcaggattagcgattacatggactaattttt 8710853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 9076353 - 9076454
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    ||||| |||||| | ||||| | |||| || ||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||||   |||||||||    
T  9076353 agtgatgtggcagtgattaagttggttaaatgacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacggagaccaattt 9076452  T
Q  422 tt 423  Q
    ||    
T  9076453 tt 9076454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 3556288 - 3556396
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||||| |||||||||| | |||| ||| ||| ||||| |||||||||||| ||||| || |||||| ||||||||| || |||| ||| ||||  ||    
T  3556288 gctaatcaatgacgtggcattgattagctgagttaaaggaggaaattttaaatgattaaagaatgcaaggctagtttgcaaggattaacgattacagaga 3556387  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  3556388 ccaattttt 3556396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 15604578 - 15604674
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | ||||| |||| | ||||| | |||  |||||||||||||||||| |||||    
T  15604578 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacggggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 15604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 285 - 422
Target Start/End: Original strand, 39936495 - 39936633
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||||| || ||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||   |||||||    
T  39936495 gggtatttttgtccttttccatgccattttgctaatttgatgacgtggcattgattaaattggtcaaaggacgaaattttaaatgattaaactttgcaag 39936594  T
Q  384 tctagtttgcgagaattagcgaatacatggaccaatttt 422  Q
      || ||||| || |||| ||| |||| |||||||||||    
T  39936595 ggtaatttgccaggattaacgattacaaggaccaatttt 39936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 45556368 - 45556434
Alignment:
Q  357 aaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||  |||||||||||    
T  45556368 aaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagcgaccaattttt 45556434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 10713009 - 10713110
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||| ||||||||| ||||| ||||||||| ||| ||||| || |||||||||||||   ||||||||    
T  10713009 agtgacgtggcagtgattaagttggtcaaaggacgacattttaaatgattaacgattgcaaggctaatttgcaaggattagcgaatacagaaaccaattt 10713108  T
Q  422 tt 423  Q
    ||    
T  10713109 tt 10713110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 8710653 - 8710613
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  8710653 gatgagggtatttttgtccattcccatgccattttgctaat 8710613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 15604524 - 15604484
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  15604524 gatgagggtatttttgtccattcccatgccattttgctaat 15604484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 41587421 - 41587325
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||| ||||||||||||||||||||||  |||||||||||  | ||||||| || | ||||| | |||| ||||| |||||||||||| |||||    
T  41587421 atgatgacggtatttttgtccattcccatgcaattttgctaatttgatgacgtgacagtgattaagttggttaaaggatgaaattttaaatgattaa 41587325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 423
Target Start/End: Complemental strand, 3555377 - 3555291
Alignment:
Q  337 attaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| |||||||||||||||||| ||||| || |||||| ||| ||||  || | || ||||||||  |||||||||||    
T  3555377 attaactgggttaaaggacgaaattttaaatgattaaagaatgcaaggctaatttgtaaggaataacgaatacagagaccaattttt 3555291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 11830551 - 11830509
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  11830551 atgacgagggtatttttgtccattcccatgccattttgctaat 11830509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 2318300 - 2318199
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| ||||||| ||||   | |||||||||||||||| |||||  | ||||||  ||  |||| ||||||||||| ||||| |||||||||    
T  2318300 agtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacatagaccaattt 2318201  T
Q  422 tt 423  Q
    ||    
T  2318200 tt 2318199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 423
Target Start/End: Original strand, 2318836 - 2318897
Alignment:
Q  362 ttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||||||| ||||||||| |  | ||||||||||||| ||||||||||    
T  2318836 ttaaatgattaatgattgcaagactagtttgcaacgaatagcgaatacatgaaccaattttt 2318897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 423
Target Start/End: Original strand, 41588302 - 41588443
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgca 381  Q
    ||||||||||||||| ||| ||||| ||||||||||||  | |||| ||||| | ||||| | |||  ||||| |||||||||||| |||||  | || |    
T  41588302 gagggtatttttgtcaatttccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgta 41588401  T
Q  382 agtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||| ||  |||| ||||||||||| |||| |||| |||||||    
T  41588402 agtgtaaattgccagaattagcgattacagggactaattttt 41588443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 8342369 - 8342278
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||| ||||||||| ||||||||||||  | |||| ||| | | ||||| | |||  |||||||||||||||||| |||||    
T  8342369 gagggtatttttgtcaattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 8342278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 11349484 - 11349542
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||  ||||||||| | |||||||||||| | |||||||||||||||| |||||    
T  11349484 gctaatcaaagacgtggcactgattaactgggttgagggacgaaattttaaatgattaa 11349542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 29957997 - 29957939
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaac 342  Q
    ||||||||||||| ||||||||| ||||||||||||  | |||||||||||| ||||||    
T  29957997 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcaatgattaac 29957939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 423
Target Start/End: Complemental strand, 30729748 - 30729662
Alignment:
Q  337 attaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||  |||||||||||||||||  ||||| || ||||||   | ||||| || ||||||||||| | ||||||||||||    
T  30729748 attaactgggtcaaaggacgaaattttaaacgattaaagaatgcaagggcaatttgcaaggattagcgaatatagggaccaattttt 30729662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 6589674 - 6589746
Alignment:
Q  351 aggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| |||||||||||| |||||   |||||||  || ||||| ||||||| ||| |||||||||||||||||    
T  6589674 aggaggaaattttaaatgattaaactttgcaagggtaatttgccagaattaacgattacatggaccaattttt 6589746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 20385717 - 20385609
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| |||    
T  20385717 gctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacaggga 20385618  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  20385617 ccaattttt 20385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 30711996 - 30712103
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| || |||||| |||||| |||    
T  30711996 gctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaataca-gga 30712094  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  30712095 ccaattttt 30712103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 30719773 - 30719880
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| || |||||| |||||| |||    
T  30719773 gctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaataca-gga 30719871  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  30719872 ccaattttt 30719880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 316 - 422
Target Start/End: Complemental strand, 30711003 - 30710897
Alignment:
Q  316 ctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggac 415  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||| |||||||||||||||  |||||||| | |||||||||||||||| ||    
T  30711003 ctaatcagtgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaaggttagtttgcaaaaattagcgaatacatgaac 30710904  T
Q  416 caatttt 422  Q
    |||||||    
T  30710903 caatttt 30710897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 282 - 423
Target Start/End: Original strand, 34177215 - 34177357
Alignment:
Q  282 tgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgc 380  Q
    |||||||||||||||||||||||||| ||||||||||||  | ||| |||||| | ||||| |||||  | |||||||||||||||| ||||| || |||    
T  34177215 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaagaatgc 34177314  T
Q  381 aagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||| ||||||| | || ||||||||||||| ||||||||||||    
T  34177315 aaggctagtttacaaggattagcgaatacaaggaccaattttt 34177357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 20386709 - 20386817
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||| ||||| || ||||||||| || ||||||||||||| |||    
T  20386709 gctaatcagtgatgtggcagtagttaactgggctcagggacgaaattttaaatgattaataattgcgaggctagtttgcaaggattagcgaatacaggga 20386808  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  20386809 ccaattttt 20386817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 13186345 - 13186446
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||||| |||  || ||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||| ||||||||    
T  13186345 agtgacgtggcagtgattaacttggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatgaaccaattt 13186444  T
Q  422 tt 423  Q
    ||    
T  13186445 tt 13186446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 1425195 - 1425094
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||| ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||| ||||||| ||||||||||    
T  1425195 agtgacgtggcaatgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacagggaccaattt 1425096  T
Q  422 tt 423  Q
    ||    
T  1425095 tt 1425094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 8316767 - 8316694
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||||||||||||||||||    
T  8316767 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacatggaccaattttt 8316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 22915531 - 22915430
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||| ||||| | |||  || ||||||||| ||||| ||||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  22915531 agtgacgtggcaatgattaaattggtcaaaagacgaaattgtaaatgattaatgattgcaaggctagtttgcaaggattagcgattacatggaccaattt 22915432  T
Q  422 tt 423  Q
    ||    
T  22915431 tt 22915430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 36928762 - 36928863
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||| ||||||| |||||||||    
T  36928762 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatacatagaccaattt 36928861  T
Q  422 tt 423  Q
    ||    
T  36928862 tt 36928863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 38862877 - 38862950
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||  |||||||||||    
T  38862877 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaattttt 38862950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 36186212 - 36186142
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||||||||||||||||||  ||||||||| || ||||||||||||| ||||||| ||||    
T  36186212 gacgaaattttaaataattaatgattgcaatactagtttgcaaggattagcgaatacagggaccaaatttt 36186142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 12199064 - 12198991
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| || | ||||||||||||    
T  12199064 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattatagggaccaattttt 12198991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 12443492 - 12443419
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| || | ||||||||||||    
T  12443492 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattatagggaccaattttt 12443419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 23698423 - 23698350
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||| |||| |||| |||||||    
T  23698423 aaggacgaaattttaactgattaatgattgcaaggctagtttgcaagaattagcgattacagggactaattttt 23698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 281 - 373
Target Start/End: Original strand, 35634341 - 35634434
Alignment:
Q  281 atgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||||| ||||||||||||  | ||||||| || | ||||| | |||| |||||||||||||||||| |||||    
T  35634341 atgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggttaaaggacgaaattttaaatgattaa 35634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 35756896 - 35756969
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||| ||||||||  |||||||||||    
T  35756896 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacagagaccaattttt 35756969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 38955986 - 38956059
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| ||||||||||||||| ||||||| | || ||||||||||||| ||||||||||||    
T  38955986 aaggactaaattttaaatgattaatgattgcaaggctagtttacaaggattagcgaatacagggaccaattttt 38956059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 39071956 - 39072028
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||||| ||||||||||||    
T  39071956 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta-cgaatacagggaccaattttt 39072028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 423
Target Start/End: Original strand, 2535781 - 2535937
Alignment:
Q  268 aagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaa 366  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||||| |||||  | ||| |||||| | ||||| |||||  | |||||||||||||||    
T  2535781 aagaagaaggatgatgagtgtatttttgtccattcccatgccattttactaatttgatgatgtggcagtcattaagtgggtcaagggacgaaattttaaa 2535880  T
Q  367 taattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | |||||   ||| |||  || ||||| || |||| ||| |||| ||||||||||||    
T  2535881 tgattaaactttgtaagggtaatttgccaggattaacgattacagggaccaattttt 2535937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 15230170 - 15230266
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||    
T  15230170 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 15230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 4994768 - 4994698
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||  || ||||||||    
T  4994768 gacgaaattttaaataattaatgattgcaaggctagtttccaaggattagcgaatacagagatcaattttt 4994698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 408
Target Start/End: Complemental strand, 7294295 - 7294157
Alignment:
Q  271 aagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataa 369  Q
    |||||| ||||||||| |||||||||||||||  ||| ||||||||||||  | |||  || || | |||||||||||  ||||| |||||||||||| |    
T  7294295 aagaaggatgatgaggttatttttgtccattcttatgccattttgctaatttgatgatctgacagtgattaactgggtcaaaggatgaaattttaaatga 7294196  T
Q  370 ttaatgattgcaagtctagtttgcgagaattagcgaata 408  Q
    |||| || |||||| ||||||| | || |||||||||||    
T  7294195 ttaaagaatgcaaggctagtttacaaggattagcgaata 7294157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 25124802 - 25124948
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||||||||||||||||  | |||||||||| | ||||| | | |  ||||| |||||||||||| |||||  |    
T  25124802 atgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttgttcaaaggatgaaattttaaatgattaaaca 25124901  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| ||||||||||| ||||  ||| |||||||    
T  25124902 atgcaagggtaaattgccagaattagcgattacagagactaattttt 25124948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 12273032 - 12272959
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| |||||| |||||||| ||||||||| || |||||||| ||||  |||||||||||    
T  12273032 aaggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgattacagagaccaattttt 12272959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 23663687 - 23663586
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| |||||||||| ||||  |||||| | || |||| |||||||| ||||||||||    
T  23663687 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgatttcaaggttagtttccaaggattaacgaatacagggaccaattt 23663588  T
Q  422 tt 423  Q
    ||    
T  23663587 tt 23663586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 40318106 - 40318005
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || |||| |||||||||| ||||||||||||||| ||||||||| || |||||||||||||  ||| |||||    
T  40318106 agtgacgtggcagtgattaagttggtcaaatgacgcaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagacaaattt 40318007  T
Q  422 tt 423  Q
    ||    
T  40318006 tt 40318005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 285 - 408
Target Start/End: Complemental strand, 34176621 - 34176497
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||||| |||||| | ||||||||||||  | |||| || || | |||||||||||  ||||| |||||||||||| ||||| || ||||||    
T  34176621 gggtatttttgtcctttcccaagccattttgctaatttgatgacctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaagaatgcaag 34176522  T
Q  384 tctagtttgcgagaattagcgaata 408  Q
     ||||||||| || |||| ||||||    
T  34176521 actagtttgcaaggattaacgaata 34176497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 423
Target Start/End: Complemental strand, 2534875 - 2534736
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    ||||||||||||| ||| ||||  ||||||||||||  | ||| |||||| | ||||||||||   | |||||||||||||||| |||||  | ||||||    
T  2534875 gggtatttttgtcaatttccataccattttgctaatttgatgatgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 2534776  T
Q  384 tctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
      |||||||| || |||||||| |||||| ||||||||||    
T  2534775 agtagtttgcaaggattagcgattacatgtaccaattttt 2534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 7295215 - 7295314
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| | ||| |||||||  ||||| |||||||||||  ||||| || |||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  7295215 tgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagactagtttgcaaggattagcgaatacagggaccgattttt 7295314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 34685575 - 34685644
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||| ||||||||||| ||| ||||||||| || |||||||||||||  |||||||||||    
T  34685575 gacgaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaataca-agaccaattttt 34685644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 423
Target Start/End: Original strand, 10445579 - 10445720
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgca 381  Q
    ||||||||||||||||||| ||||| ||||||||||||  | |||||||||| | ||||| | |||  || ||||||||||||||| |||||  | ||||    
T  10445579 gagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgca 10445678  T
Q  382 agtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||  ||  |||| || |||||||| |||| |||| |||||||    
T  10445679 agggtaaattgccaggattagcgattacagggactaattttt 10445720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 15230116 - 15230076
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  15230116 gatgagggtatttttgtccattcccatgccattttgctaat 15230076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 37542464 - 37542560
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaa-tcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||  ||||||||||||||| ||| |||||| | | | ||||| | |||  |||||||||||||||||| |||||    
T  37542464 atgacgagggtatttttgtccattctaatgtcattttgctaattcaatgacgttggagtgattaagttggtcaaaggacgaaattttaaatgattaa 37542560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 34061616 - 34061715
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| ||||| | ||||||| |||  |||||||||||||||||| ||||| || ||||||   | ||||| || ||||||||||||||||| ||||||||    
T  34061616 tgacatggcagtgattaacttggtcaaaggacgaaattttaaatgattaaagaatgcaagggcaatttgcaaggattagcgaatacatggatcaattttt 34061715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 42945296 - 42945205
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| |||||| |||||  | |||| ||||| | ||||| | |||  |||||||||||||||||| |||||    
T  42945296 gagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 42945205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 44664752 - 44664843
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||||||||||||||||| ||||||||||||| | |||| ||||||| ||||| | |||  ||  |||||||||||||| |||||    
T  44664752 gaggatatttttgtccattcccatgccattttgctaatctgatgacttggcaatgattaagttggtcaaataacgaaattttaaatgattaa 44664843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 21432932 - 21432974
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  21432932 atgacgagggtatttttatccattcccatgtcattttgctaat 21432974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 27500270 - 27500233
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27500270 gagggtatttttgtccattctcatgtcattttgctaat 27500233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 39474733 - 39474637
Alignment:
Q  277 aatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||  | ||| |||||| | ||||| | || |||| ||||||||||||||| |||||    
T  39474733 aatgacgagggtatttttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttgg-tcaaagacgaaattttaaatgattaa 39474637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 6471877 - 6471781
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||| ||||||| |||||||||||||||||||||||||  | |||||||||| | ||||| | | |  || ||||||||||||||| |||||    
T  6471877 atgacgaggatatttttatccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttgataaaaagacgaaattttaaatgattaa 6471781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 41353820 - 41353908
Alignment:
Q  286 ggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||| |  | ||||| | |||  |||||||||||||||||| |||||    
T  41353820 ggtatttttgtccattctcatgtcattttgctaatttgatgacgtgacggtgattaagttggtcaaaggacgaaattttaaatgattaa 41353908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 42945353 - 42945449
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| |||||| |||||  | |||| ||||| | ||||| | |||  || ||||||||||||||| |||||    
T  42945353 atgacgagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaatgacgaaattttaaatgattaa 42945449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 44664695 - 44664599
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||| ||||||||||||||||| || ||||||||||||  | |||||||||| | ||||| | |||  || ||||||||||||||| |||||    
T  44664695 atgacgaggatatttttgtccattcccgtgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaa 44664599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 423
Target Start/End: Complemental strand, 33357593 - 33357539
Alignment:
Q  369 attaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||| ||| || |||||| || ||||||||||||||||| ||||||||    
T  33357593 attaatgattgtaagactggtttgcaaggattagcgaatacatggatcaattttt 33357539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 11674949 - 11675050
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | ||| ||||||| ||||||||||| |||||  |||||||| |||  |||| || |||||| | |||| |||| |||||    
T  11674949 agtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaattt 11675048  T
Q  422 tt 423  Q
    ||    
T  11675049 tt 11675050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 11762020 - 11761931
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||||||||||||  |||||||||||  | |||||||||| | |||||| | | | | | |||||||||||||| |||||    
T  11762020 gggtatttttgtccattcccatgctattttgctaatttgatgacgtggcagtgattaacagtgatgaggtacgaaattttaaatgattaa 11761931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 31608799 - 31608900
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| ||||   | |||||||||||||||| ||||   | ||||||  ||  |||| || ||||||||||||||||||||||||    
T  31608799 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattagacaatgcaagggtaaattgcaaggattagcgaatacatggaccaattt 31608898  T
Q  422 tt 423  Q
    ||    
T  31608899 tt 31608900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 423
Target Start/End: Complemental strand, 46899242 - 46899102
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| ||||||||||||||||||| ||||||| | ||  | ||| |||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  46899242 agggcatttttgtccattcccatgccattttgtttatttgatgatgtggcagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaa 46899143  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
      ||||||||| |||||||||||||||||||||||||||||    
T  46899142 agctagtttgcaagaattagcgaatacatggaccaattttt 46899102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 423
Target Start/End: Original strand, 46899847 - 46899987
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| |||||||| |||||||||| |||||| |||||  | ||||||| || |||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  46899847 agggcatttttgttcattcccatgccattttactaatttgatgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaa 46899946  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||||||| ||||||||||||||||| |||||||||||    
T  46899947 ggctagtttgcaagaattagcgaatacattgaccaattttt 46899987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 5734952 - 5735098
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||||||||| ||||||||| |||| |||| ||||||| ||||  | ||||||| || |||||||||||| ||| |||||||||||||||| ||||||||    
T  5734952 atgatgagggcatttttgtctattctcatgccattttgttaatttgatgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatga 5735051  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||| ||| ||||||||| || ||||||||||||||| ||||||||||    
T  5735052 ttgtaaggctagtttgcaaggattagcgaatacatgaaccaattttt 5735098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 323 - 423
Target Start/End: Complemental strand, 47999264 - 47999164
Alignment:
Q  323 gtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaatttt 422  Q
    ||||||||||||||||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| |||||||||||    
T  47999264 gtgacgtggcaataattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttt 47999165  T
Q  423 t 423  Q
    |    
T  47999164 t 47999164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 6367848 - 6367949
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  6367848 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 6367947  T
Q  422 tt 423  Q
    ||    
T  6367948 tt 6367949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 183363 - 183262
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  183363 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 183264  T
Q  422 tt 423  Q
    ||    
T  183263 tt 183262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 1103775 - 1103848
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  1103775 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaattttt 1103848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 26024678 - 26024779
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| |||| ||||||||||    
T  26024678 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattacagggaccaattt 26024777  T
Q  422 tt 423  Q
    ||    
T  26024778 tt 26024779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 48779405 - 48779506
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| |||||    
T  48779405 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcaaatacatggactaattt 48779504  T
Q  422 tt 423  Q
    ||    
T  48779505 tt 48779506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 49723012 - 49723113
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  ||||| |||||||||||| ||||||||||| ||| ||||||||| || ||||||||||||||||||||||||    
T  49723012 agtgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgaaaggctagtttgcaaggattagcgaatacatggaccaattt 49723111  T
Q  422 tt 423  Q
    ||    
T  49723112 tt 49723113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 322 - 424
Target Start/End: Original strand, 42248757 - 42248859
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    ||||||||| |||| ||||| | |||  || | |||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||  |||||||||    
T  42248757 agtgacgtgacaatgattaagttggtcaaatgtcgaaattttaaataattaataattgcaagactagtttgcaagaattagcgaatacagagaccaattt 42248856  T
Q  422 ttt 424  Q
    |||    
T  42248857 ttt 42248859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 1841745 - 1841845
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||||    
T  1841745 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag-ctagtttgcaaggattagcgaatacagggaacaattt 1841843  T
Q  422 tt 423  Q
    ||    
T  1841844 tt 1841845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 4960823 - 4960896
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||  ||||||||||||    
T  4960823 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacggggaccaattttt 4960896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 13914182 - 13914109
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||| || |||||||||||||||||| |||||||    
T  13914182 aaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacatggactaattttt 13914109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 30711613 - 30711714
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||  |||||||||    
T  30711613 agtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaattt 30711712  T
Q  422 tt 423  Q
    ||    
T  30711713 tt 30711714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 32132498 - 32132345
Alignment:
Q  271 aagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataa 369  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||  | |||||||||| ||||||| |||||  | |||||||||||||| | |    
T  32132498 aagaaggatgatgaggttatttttgtccattcccatgacattttgctaatttgatgacgtggcagtaattaagtgggtgtagggacgaaattttaattga 32132399  T
Q  370 ttaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||   ||| |||  || ||||| || |||| ||| ||||||||| |||||||    
T  32132398 ttaaactttgtaagagtaatttgcaaggattaacgattacatggacgaattttt 32132345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 32917546 - 32917647
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||||| ||||| | |||  ||||| |||||||||||| ||||||||||||||| ||||||||| || |||| ||||||||  |||||||||    
T  32917546 agtgacgtggcaatgattaagttggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacagagaccaattt 32917645  T
Q  422 tt 423  Q
    ||    
T  32917646 tt 32917647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 36694396 - 36694323
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||| |||||||||||    
T  36694396 aagggcgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaattttt 36694323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 36710497 - 36710424
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||| |||||||||||    
T  36710497 aagggcgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaattttt 36710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 40210484 - 40210411
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||  |||||| ||||    
T  40210484 aaggacgaaattttaaatgattaatgattgcaagtctagtttgcaaggattagcgaatacaaagaccaaatttt 40210411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 7371472 - 7371381
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  ||||||||||||||||||||||||    
T  7371472 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaataattaa 7371381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 423
Target Start/End: Complemental strand, 5734192 - 5734051
Alignment:
Q  282 tgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgc 380  Q
    |||||||||||||||||||||||||| ||||||| ||||  | ||||||| || |||||||  |||| || |||| ||||||||||| |||||  | |||    
T  5734192 tgagggtatttttgtccattcccatgccattttgttaatttgatgacgtgacagtaattaaacgggtgcagggacaaaattttaaatgattaaacaatgc 5734093  T
Q  381 aagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||| ||| ||||| || |||||||| ||||| |||||||||||    
T  5734092 aagactaatttgcaaggattagcgattacat-gaccaattttt 5734051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 17661965 - 17661893
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||  ||||||||| || ||||||||||||| ||||||||||||    
T  17661965 aaggacgaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaataca-ggaccaattttt 17661893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 37578302 - 37578233
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||| ||||||||||| ||| ||||||||| || ||||||||||||| ||||||||||||    
T  37578302 acgaaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaatacagggaccaattttt 37578233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 423
Target Start/End: Original strand, 35040835 - 35040999
Alignment:
Q  260 ttcataggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaa 358  Q
    |||| ||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||  | |||| ||| | | ||||| | |||  |||||||||    
T  35040835 ttcaaaggaaaaagaagaaagacgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaa 35040934  T
Q  359 attttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||| |||||  | ||||||  ||  |||  || |||||||| ||||||||| |||||||    
T  35040935 attttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggactaattttt 35040999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 7821268 - 7821340
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| ||||| ||||||||||||| | ||||||||| || |||||||||||||| |||||||||||    
T  7821268 aaggacgaaattataaatgattaatgattgcacggctagtttgcaaggattagcgaatacat-gaccaattttt 7821340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 24009689 - 24009616
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||| |||||||||||| ||||||||||||||| |||||| || || ||||| ||||||| ||||||||||||    
T  24009689 aaggatgaaattttaaatgattaatgattgcaaggctagttggcaaggattagtgaatacaaggaccaattttt 24009616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 43759136 - 43759209
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||| | ||||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  43759136 aaggacgaaattttaaatgattgaagattgcaaggctagtttgcaaggattagcgaatacagggaccgattttt 43759209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 8898704 - 8898608
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | ||||||| || | ||||| | |||  |||||||||||||||||| |||||    
T  8898704 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaaattggtcaaaggacgaaattttaaatgattaa 8898608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 35038642 - 35038546
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||| |||||||||||||||||||| ||||||||||||  | |||||||||| | ||| | | |||  |||||||||||||||||| |||||    
T  35038642 atgatgaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgagttggtcaaaggacgaaattttaaatgattaa 35038546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 40714631 - 40714535
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  || ||||||||||||||| |||||    
T  40714631 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaa 40714535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 315 - 383
Target Start/End: Complemental strand, 42533160 - 42533092
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    ||||||||||||||||||| |||||||||||| |||  ||| ||||||||||| ||| |||||||||||    
T  42533160 gctaatcagtgacgtggcagtaattaactgggctcagagacaaaattttaaatgattgatgattgcaag 42533092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 41099050 - 41099120
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||| ||||||||||| |||  |||||||| || |||||||||||||  |||||||||||    
T  41099050 gacgaaattttaaatgattaatgattgtaaggttagtttgcaaggattagcgaatacagagaccaattttt 41099120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 423
Target Start/End: Complemental strand, 49955534 - 49955388
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | ||| |||||| | ||||| | |||  |||||| ||||||||||| |||||  |    
T  49955534 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaaaca 49955435  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||||||| |||| |||| |||||||    
T  49955434 atgcaagggtaaattgccaggattagcgattacagggactaattttt 49955388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 35473745 - 35473672
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| |||||||||||  ||||||||| |||| ||||||||| || |||||||| |||| ||||||||||||    
T  35473745 aaggacaaaattttaaatgtttaatgattacaaggctagtttgccaggattagcgattacagggaccaattttt 35473672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 19017739 - 19017683
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaataca 410  Q
    |||||||||||||| ||||||||||||||| ||||||||  || |||||||||||||    
T  19017739 acgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcgaataca 19017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 28324991 - 28324895
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||  | |||||||||| | ||||| | |||  || ||||||||||||||| |||||    
T  28324991 atgacgagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaa 28324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 31058296 - 31058392
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  ||  |||||||||||||| |||||    
T  31058296 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaatacgaaattttaaatgattaa 31058392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 423
Target Start/End: Complemental strand, 34849164 - 34849052
Alignment:
Q  311 ttttgctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaataca 410  Q
    ||||||||||| ||||||||||| | |||||  |||   | |||||||||||||||| |||||   |||||||  || ||||| || |||||||||||||    
T  34849164 ttttgctaatcggtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaataca 34849065  T
Q  411 tggaccaattttt 423  Q
     ||||||||||||    
T  34849064 gggaccaattttt 34849052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 34850344 - 34850452
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| | ||||| ||||   | ||| |||||||||||| |||||   |||||||  || ||||| || ||||||||||||| |||    
T  34850344 gctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacaggga 34850443  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  34850444 ccaattttt 34850452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 48691293 - 48691189
Alignment:
Q  319 atcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaa 418  Q
    ||||||||||||||| | ||||| ||||   |  ||| ||||||||||| || ||||||||||||  |||||||| ||||||| ||||||||  ||||||    
T  48691293 atcagtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgatcaatgattgcaaggttagtttgcaagaattaacgaatacagcgaccaa 48691194  T
Q  419 ttttt 423  Q
    |||||    
T  48691193 ttttt 48691189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 13295320 - 13295225
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaat 374  Q
    |||||||||||||||||| ||| ||||||||||||||||||  | |||||||||| | |||||| |||   | |||||| ||||||||| ||||||    
T  13295320 gatgagggtatttttgtctatttccatgtcattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgacattttaaatgattaat 13295225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 49955591 - 49955682
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||| ||||  | ||||| | |||  |||||||||||||||||| |||||    
T  49955591 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaagttggtcaaaggacgaaattttaaatgattaa 49955682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 423
Target Start/End: Complemental strand, 17691398 - 17691260
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagt 384  Q
    |||||||||||||| |||  ||   |||||| |||||| ||| |||| | |  |||||| |||| | |||||||||||||||| |||||  | ||||||     
T  17691398 gggtatttttgtcctttcaaatcatattttgttaatcactgatgtggaagtggttaacttggttgagggacgaaattttaaatgattaaacaatgcaaga 17691299  T
Q  385 ctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||| ||||| || |||||||| |||| ||||||||||||    
T  17691298 ctaatttgcaaggattagcgattacagggaccaattttt 17691260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 20760752 - 20760786
Alignment:
Q  286 ggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||||||||||    
T  20760752 ggtatttttgtccattcccatgtcattttgctaat 20760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 23209503 - 23209417
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaata 408  Q
    |||||||||||| | ||||| | |||  ||| || ||||||||||| ||||||||||||||| ||||||||| || |||| ||||||    
T  23209503 agtgacgtggcagtgattaagttggtcaaagaacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaata 23209417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 8898761 - 8898798
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||| |||||||||||||||    
T  8898761 gagggtatttttgtccattcccgtgtcattttgctaat 8898798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 17189136 - 17189099
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17189136 gagggtatttttgtccattcccatgccattttgctaat 17189099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 19323002 - 19322933
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||| |||||||| ||||||||||||||   |||||||| || ||||||||||||||| || |||||||    
T  19323002 acgaacttttaaatgattaatgattgcaaagttagtttgcaaggattagcgaatacatgaacgaattttt 19322933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 19323210 - 19323279
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||| |||||||| ||||||||||||||   |||||||| || ||||||||||||||| || |||||||    
T  19323210 acgaacttttaaatgattaatgattgcaaagttagtttgcaaggattagcgaatacatgaacgaattttt 19323279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 30326673 - 30326641
Alignment:
Q  288 tatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||||||||||||||    
T  30326673 tatttttgtccattcccatgtcattttgctaat 30326641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 50062383 - 50062348
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||| ||||||||||||||||||||||    
T  50062383 gggtatttttgtcaattcccatgtcattttgctaat 50062348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 45750091 - 45750177
Alignment:
Q  288 tatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  || || |||||||||||| |||||    
T  45750091 tatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgatgaaattttaaatgattaa 45750177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 14879257 - 14879318
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||| |||||||    
T  14879257 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatggttgcaag 14879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 24905309 - 24905208
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | ||| ||||||| ||||||||||| |||||  |||||||| |||  |||| || |||||| | |||| |||| |||||    
T  24905309 agtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgcaaggattagcaattacagggacgaattt 24905210  T
Q  422 tt 423  Q
    ||    
T  24905209 tt 24905208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 28325048 - 28325085
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  28325048 gaggatatttttgtccattcctatgtcattttgctaat 28325085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 34464591 - 34464490
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| |||||  ||||||||  ||  |||| |  |||||||| |||||||||||||||    
T  34464591 agtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacattgcaagggtaaattgccaagattagcgattacatggaccaattt 34464492  T
Q  422 tt 423  Q
    ||    
T  34464491 tt 34464490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 383
Target Start/End: Original strand, 35152657 - 35152690
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||||||||| |||||||||||||||    
T  35152657 aaggacgaaattttaaatgattaatgattgcaag 35152690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 383
Target Start/End: Original strand, 40772786 - 40772819
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaag 383  Q
    ||||||||||||| ||||||||||||||||||||    
T  40772786 aaggacgaaatttgaaataattaatgattgcaag 40772819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 45750024 - 45749987
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  45750024 gagggtatttttgtccattctcatgccattttgctaat 45749987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 13300183 - 13300291
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| | ||||| |||||| |||||  || |||||| | ||||| || || |||  || ||||| || ||||| |||||||  ||    
T  13300183 gctaatcagtgacgtggcactgattaagtgggttgaaggatcaatttttaagttattaaagaatgtaagagtaatttgcaaggattagtgaatacagaga 13300282  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  13300283 ccaattttt 13300291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 5e-33; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 681007 - 681115
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||  ||    
T  681007 gctaatcagtgacgtggcagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagaga 681106  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  681107 ccaattttt 681115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 284 - 423
Target Start/End: Original strand, 13379729 - 13379869
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| |||||||||||||||||   ||||||||||||  | |||| || || |||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  13379729 agggcatttttgtccattcccaaaccattttgctaatttgatgacatgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaa 13379828  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||||||| |||||||||||||||| ||||||||||||    
T  13379829 ggctagtttgcaagaattagcgaatacagggaccaattttt 13379869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 423
Target Start/End: Original strand, 20651899 - 20652034
Alignment:
Q  289 atttttgtccattcccatgtcattttgctaatc-agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtcta 387  Q
    |||||| |||||||||||||||||||||||||  | |||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||| ||     
T  20651899 atttttatccattcccatgtcattttgctaatttaatgacgtggcagtaattaactgggttcagggacgaaattttaaatgattaacgattgcaaggctg 20651998  T
Q  388 gtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| || ||||| ||||||| ||| ||||||||    
T  20651999 gtttgcaaggattagtgaatacagggatcaattttt 20652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 680015 - 679907
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||  ||    
T  680015 gctaatcagtgatgtggcagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagaga 679916  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  679915 ccaattttt 679907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 284 - 423
Target Start/End: Complemental strand, 20651191 - 20651051
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| ||||||||||||||||||| ||||||||||||  | |||||||||| | |||||||||  ||| |||||||||||||||| ||||||||||||||    
T  20651191 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagttattaactggactcatggacgaaattttaaatgattaatgattgcaa 20651092  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | || |||||| || ||||||||||||| | ||||||||||    
T  20651091 ggctggtttgcaaggattagcgaatacaggaaccaattttt 20651051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 11434944 - 11434843
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | |||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  11434944 agtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaacgattagcgaatacatggaccaattt 11434845  T
Q  422 tt 423  Q
    ||    
T  11434844 tt 11434843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 21627855 - 21627754
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||| ||||||    
T  21627855 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggatcaattt 21627756  T
Q  422 tt 423  Q
    ||    
T  21627755 tt 21627754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 30337704 - 30337805
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| |||| ||||||||||    
T  30337704 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaattt 30337803  T
Q  422 tt 423  Q
    ||    
T  30337804 tt 30337805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 30726045 - 30726146
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| |||||||||| |||| ||||||||| || ||||||||||||| ||||||||||    
T  30726045 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgatttcaaggctagtttgcaaggattagcgaatacagggaccaattt 30726144  T
Q  422 tt 423  Q
    ||    
T  30726145 tt 30726146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 30804147 - 30804248
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||| ||| ||||||    
T  30804147 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaacgctagtttgcaagaattagcgaatacagggatcaattt 30804246  T
Q  422 tt 423  Q
    ||    
T  30804247 tt 30804248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 33517820 - 33517921
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||| ||||| || ||||||||||||| ||||||||||    
T  33517820 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatacagggaccaattt 33517919  T
Q  422 tt 423  Q
    ||    
T  33517920 tt 33517921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 12080950 - 12081023
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| |||| |||||||    
T  12080950 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggacaaattttt 12081023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 8090206 - 8090314
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||| |||||||||||||||||||||| ||| |||| ||||||||||| |||||   |||||||  || ||||| || ||||| ||||||| |||    
T  8090206 gctaatcagcgacgtggcaataattaactgggctcagggaccaaattttaaatgattaaactttgcaagggtaatttgcaaggattagtgaatacaagga 8090305  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  8090306 ccaattttt 8090314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 423
Target Start/End: Original strand, 3059576 - 3059643
Alignment:
Q  356 gaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  3059576 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 3059643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 11393121 - 11393191
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| |||| ||||||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  11393121 gacgaaatttgaaatgattaatgattgcaagtctagtttgcaaggattagcgaatacggggaccaattttt 11393191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 423
Target Start/End: Complemental strand, 8089641 - 8089484
Alignment:
Q  267 gaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaa 365  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||  | ||||||| |  | ||||| |||||| | ||||||||||||||    
T  8089641 gaagatgaagaaggatgagggtatttttgtccattcccatgccattttgttaatttgatgacgtgtcggtcattaagtgggttaagggacgaaattttaa 8089542  T
Q  366 ataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    || |||||  | ||||||  || ||||| || |||| ||| || | ||||||||||||    
T  8089541 atgattaaacaatgcaagggtaatttgcaaggattaacgattatagggaccaattttt 8089484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 17734338 - 17734237
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||||| | |||| | ||||||||    
T  17734338 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaattacaagaaccaattt 17734239  T
Q  422 tt 423  Q
    ||    
T  17734238 tt 17734237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 33647265 - 33647338
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| |||||||||||||||  |||||||| || ||||||||||||| ||||||||||||    
T  33647265 aaggactaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacagggaccaattttt 33647338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 31407117 - 31407213
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||||||||||||||||  | ||||||| || | ||||| | |||  |||||||||||||||||| |||||    
T  31407117 atgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 31407213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 22503013 - 22503159
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||||||||||||||||  | |||||||||| | ||||| | |||  || ||||||| ||||||| |||||  |    
T  22503013 atgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaaatttaaatgattaaaca 22503112  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||||||| |||| |||| |||||||    
T  22503113 atgcaaggataaattgccaggattagcgattacaaggactaattttt 22503159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 423
Target Start/End: Complemental strand, 26463326 - 26463220
Alignment:
Q  317 taatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggacc 416  Q
    ||||||||||||||||| | |||||||||| | | |||||||||||||||| |||||   |||||||  || ||||| || |||| |||||||| |||||    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaactttgcaagggtaatttgccaggattaacgaatacagggacc 26463227  T
Q  417 aattttt 423  Q
    |||||||    
T  26463226 aattttt 26463220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 15913787 - 15913883
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | ||||||| || | ||||| | |||  |||||||||||||||||| |||||    
T  15913787 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaattattaa 15913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 28498304 - 28498412
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    ||||||||||||||||||| | |||||||||| ||| |||| ||||||||||| |||||   |||  ||  |||||||| || |||||||| |||| |||    
T  28498304 gctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaaactttgggagggtagtttgccaggattagcgattacaagga 28498403  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  28498404 ccaattttt 28498412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 317 - 423
Target Start/End: Original strand, 15116513 - 15116619
Alignment:
Q  317 taatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggacc 416  Q
    |||||||||||||||||   |||||||||||| | |||| || |||||||| |||||   ||||||| ||||||||| || |||||||| |||  |||||    
T  15116513 taatcagtgacgtggcatcgattaactgggttgagggaccaatttttaaatgattaaactttgcaaggctagtttgcaaggattagcgattacgaggacc 15116612  T
Q  417 aattttt 423  Q
    |||||||    
T  15116613 aattttt 15116619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 7160991 - 7160895
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||||||||||||||||||||||  |||||||||||  | |||||||| | | ||||| | |||  |||||||||||||||||| |||||    
T  7160991 atgacgagggtatttttgtccattcccatgctattttgctaatttgatgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 7160895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 7905482 - 7905578
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  || |||||||||| |||| |||||    
T  7905482 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaatttgaaatgattaa 7905578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 12407657 - 12407549
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||| |||||||||||| ||||||||| |||||| |||| ||||||||||| |||||   |||| ||  || ||| | || |||||||||||||  ||    
T  12407657 gctaattagtgacgtggcagtaattaactaggttcagggaccaaattttaaatgattaaactttgctagagtaatttacaaggattagcgaatacagaga 12407558  T
Q  415 ccaattttt 423  Q
    |||||||||    
T  12407557 ccaattttt 12407549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 21836217 - 21836122
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| |  ||  |||||||||||||||||| |||||    
T  21836217 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagt-tgtcaaaggacgaaattttaaatgattaa 21836122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 12065407 - 12065365
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  12065407 atgacgagggtatttttgtccattcccatgccattttgctaat 12065365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 29810715 - 29810773
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||| | |||||||||| ||| |||| ||||||||||| |||||    
T  29810715 gctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 29810773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 12408450 - 12408558
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatgga 414  Q
    |||||||||||| ||| |  |||||||||||| ||| |||  ||||||||||| |||||   |||||||  || ||||| || ||||||||||||| |||    
T  12408450 gctaatcagtgatgtgacggtaattaactgggctcagggatcaaattttaaatgattaaactttgcaaggataatttgcaaggattagcgaatacaagga 12408549  T
Q  415 ccaattttt 423  Q
    |||| ||||    
T  12408550 ccaactttt 12408558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 21836274 - 21836365
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| |||||||||||||||||||| ||||||| ||||  | |||| ||||| | ||||| | |||  |||||||||||||||||| |||||    
T  21836274 gaggatatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 21836365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 22502956 - 22502865
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||||||||| |||  ||||||||||||  | |||| ||||| | ||||| | |||  |||||||||||||||||| |||||    
T  22502956 gagggtatttttgtccattctcataccattttgctaatttgatgacttggcagttattaagttggtcaaaggacgaaattttaaatgattaa 22502865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 7905425 - 7905388
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||| || ||||||||||||    
T  7905425 gagggtatttttgtccattcccgtgccattttgctaat 7905388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 31407060 - 31407023
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  31407060 gagggtatttttgtccatttccatgccattttgctaat 31407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 268 - 423
Target Start/End: Original strand, 11741748 - 11741904
Alignment:
Q  268 aagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaa 366  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||  | |||| || || | |||||||||||  |||||||||||||||||    
T  11741748 aagaagaaggatgatgagggtatttttgtccattccaatgccattttgctaatttgatgacctgacagtgattaactgggtcaaaggacgaaattttaaa 11741847  T
Q  367 taattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||| || |||||| ||||||||| |  |||||||||||||  |||| ||||||    
T  11741848 tgattaaagaatgcaaggctagtttgcaaagattagcgaatacagagaccgattttt 11741904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 6301685 - 6301584
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  6301685 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaataattaatgattgcaagactagtttgcaaggattagcgaatacaaggaccaattt 6301586  T
Q  422 tt 423  Q
    ||    
T  6301585 tt 6301584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 21265285 - 21265184
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||    
T  21265285 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcaaatacatggaccaattt 21265186  T
Q  422 tt 423  Q
    ||    
T  21265185 tt 21265184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 5994203 - 5994276
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||| ||||||||||    
T  5994203 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatgaaccaattttt 5994276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 6301829 - 6301930
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||||| ||||||||||    
T  6301829 agtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacaaggaccaattt 6301928  T
Q  422 tt 423  Q
    ||    
T  6301929 tt 6301930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 11762003 - 11762104
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  11762003 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 11762102  T
Q  422 tt 423  Q
    ||    
T  11762103 tt 11762104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 14194537 - 14194464
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  14194537 aaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaattttt 14194464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 16156997 - 16156896
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || |||| ||||||||| |||||||||    
T  16156997 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacatagaccaattt 16156898  T
Q  422 tt 423  Q
    ||    
T  16156897 tt 16156896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 28269564 - 28269463
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||  ||||||||||    
T  28269564 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatactgggaccaattt 28269465  T
Q  422 tt 423  Q
    ||    
T  28269464 tt 28269463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 38475175 - 38475074
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| |||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  38475175 agtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacatggaccaattt 38475076  T
Q  422 tt 423  Q
    ||    
T  38475075 tt 38475074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 39453585 - 39453686
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||| ||||||||||    
T  39453585 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagggaccaattt 39453684  T
Q  422 tt 423  Q
    ||    
T  39453685 tt 39453686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 284 - 423
Target Start/End: Original strand, 21257408 - 21257548
Alignment:
Q  284 agggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaa 382  Q
    |||| |||||||||||||| |||| ||||||||||||  | ||| |||| | |||||||||||||||   |||||| |||||||| ||||||||| ||||    
T  21257408 agggcatttttgtccattctcatgccattttgctaatttgatgatgtggtagtaattaactgggttccgagacgaatttttaaatgattaatgatcgcaa 21257507  T
Q  383 gtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    | ||||||||| || |||||||||||||  | |||||||||    
T  21257508 ggctagtttgcaaggattagcgaatacagtgtccaattttt 21257548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 186705 - 186806
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    ||||||||| |||| ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| |  |||||| |||||| ||||||||||    
T  186705 agtgacgtgacaatgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcaaatacagggaccaattt 186804  T
Q  422 tt 423  Q
    ||    
T  186805 tt 186806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 6150706 - 6150807
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| |  |||| ||||||||||||| |||||    
T  6150706 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattaacgaatacatggactaattt 6150805  T
Q  422 tt 423  Q
    ||    
T  6150806 tt 6150807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 11047723 - 11047823
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||| || ||||| |||||||| |||||||||    
T  11047723 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacat-gaccaattt 11047821  T
Q  422 tt 423  Q
    ||    
T  11047822 tt 11047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 17202685 - 17202786
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||| ||||    
T  17202685 agtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccgattt 17202784  T
Q  422 tt 423  Q
    ||    
T  17202785 tt 17202786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 19892422 - 19892349
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| || |||| |||||||||||||||||||||    
T  19892422 aaggacgaaattttaaatgattaatgattacaaggctagtttgcaaggattaacgaatacatggaccaattttt 19892349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 20814277 - 20814177
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||| |||||||||||||||||| ||||||||||||||  ||||||||| || |||||||||||||  |||||||||    
T  20814277 agtgacgtggcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaatactagtttgcaaggattagcgaataca-agaccaattt 20814179  T
Q  422 tt 423  Q
    ||    
T  20814178 tt 20814177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 27587429 - 27587502
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  27587429 aaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccaattttt 27587502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 29646504 - 29646403
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||  ||||||||||| ||||||||||| ||| ||||||||| || ||||||||||||||||||||||||    
T  29646504 agtgacgtggcagtgattaagttggtcaaaggataaaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaatacatggaccaattt 29646405  T
Q  422 tt 423  Q
    ||    
T  29646404 tt 29646403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 35920342 - 35920269
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||| || |||||||||||||| |||||||||||    
T  35920342 aaggacgaaattttaaatgattaatgattgcaaggctaatttgcaaggattagcgaatacattgaccaattttt 35920269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 43159100 - 43159201
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||||||||||||||| ||||||||||||||| ||||||||  || |||||||||||||  |||||||||    
T  43159100 agtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaatacaacgaccaattt 43159199  T
Q  422 tt 423  Q
    ||    
T  43159200 tt 43159201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 423
Target Start/End: Complemental strand, 37991316 - 37991240
Alignment:
Q  347 ttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||| || |||| |||||||| ||||||||||||    
T  37991316 ttcaaggacgaaatttgaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacagggaccaattttt 37991240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 35512431 - 35512501
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || ||| ||||||||| ||||||||||||    
T  35512431 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatacagggaccaattttt 35512501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 3529015 - 3528914
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||| ||||||||| ||||||||| || |||||| |||||| ||||||||||    
T  3529015 agtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcaaatacagggaccaattt 3528916  T
Q  422 tt 423  Q
    ||    
T  3528915 tt 3528914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 5024161 - 5024060
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| |||| |||||||||| ||||||||| || ||||||||||||||| | ||||||    
T  5024161 agtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattagtgattgcaaggctagtttgcaaggattagcgaatacatgtatcaattt 5024062  T
Q  422 tt 423  Q
    ||    
T  5024061 tt 5024060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 8322718 - 8322791
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||||  ||||||||||||    
T  8322718 aaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacggggaccaattttt 8322791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 13963147 - 13963216
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||| ||||||||||||||| ||||||||| || |||| ||||||||| |||||||||||    
T  13963147 acgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacatagaccaattttt 13963216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 16083261 - 16083330
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| ||| ||||||||||    
T  16083261 acgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatatatgaaccaattttt 16083330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 32242528 - 32242628
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| |||| |||||    
T  32242528 agtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaataca-ggactaattt 32242626  T
Q  422 tt 423  Q
    ||    
T  32242627 tt 32242628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 324 - 423
Target Start/End: Complemental strand, 11740827 - 11740728
Alignment:
Q  324 tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||| || | |||||||||||  |||||| ||||||||||| ||||| || |||||| ||||||||| || ||||||||||| ||||| ||||||||    
T  11740827 tgacgtgacagtcattaactgggtcaaaggacaaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatatatggatcaattttt 11740728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 22870363 - 22870417
Alignment:
Q  265 aggaagaagaagaatgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22870363 aggacgaagaaga-tgatgagggtatttttgtccattcccatgtcattttgctaat 22870417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 19517928 - 19517994
Alignment:
Q  357 aaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||||||| |||||||    
T  19517928 aaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacatggactaattttt 19517994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 28771011 - 28770910
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||| ||||||||||| || |||||||| ||| ||||||||| || ||||||||||||| ||||||||||    
T  28771011 agtgacgtggcagtgattaagttggtcaaatgactaaattttaaatgatcaatgattgtaaggctagtttgcaaggattagcgaatacagggaccaattt 28770912  T
Q  422 tt 423  Q
    ||    
T  28770911 tt 28770910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 20153157 - 20153253
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||| ||||||||||||||||||||||||||||||||||||||  | |||||| ||| | ||||| | |||  ||||| |||||||||||| |||||    
T  20153157 atgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaagttggtcaaaggatgaaattttaaatgattaa 20153253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 27937164 - 27937096
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| |  |||||||||    
T  27937164 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatatagagaccaattt 27937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 38442381 - 38442454
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||||||||||||  |||||||||||||| ||||||||| || |||| |||||||| | ||| ||||||    
T  38442381 aaggacgaaattttaaatggttaatgattgcaaggctagtttgcaaggattaacgaatacaagaacccattttt 38442454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 42265841 - 42265776
Alignment:
Q  358 aattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||| ||||| || |||||| ||||||||| || ||||||||||||| ||||||||||||    
T  42265841 aattttaaatcattaaagaatgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 42265776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 22869790 - 22869702
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaat 367  Q
    ||||||||||||||||||||||| |||| ||||||||||||  | |||||||||| | |||||| |||   | ||||||||||||||||    
T  22869790 gatgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaattttaaat 22869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 13362369 - 13362298
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgc 393  Q
    |||||||||||| | ||||| | |||   ||||||||||||||||| ||||||||||||||| |||||||||    
T  13362369 agtgacgtggcagtgattaagttggtcagaggacgaaattttaaatgattaatgattgcaaggctagtttgc 13362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 17544287 - 17544329
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  17544287 atgacgagggtatttttgtccattcccatgccattttgctaat 17544329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 17544230 - 17544193
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17544230 gagggtatttttgtccattcccatgccattttgctaat 17544193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 20153100 - 20153063
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  20153100 gagggtatttttgtccattcccatgccattttgctaat 20153063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 22298724 - 22298687
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22298724 gagggtatttttgtcaattcccatgtcattttgctaat 22298687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 10684255 - 10684311
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatac 409  Q
    ||||||| ||||||| ||||||||||||||| ||||||||| || ||||| ||||||    
T  10684255 gacgaaactttaaatgattaatgattgcaagactagtttgcaaggattagtgaatac 10684311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 20840760 - 20840824
Alignment:
Q  359 attttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    ||||||||| ||||||||||||||| ||||||||| || |||||||| ||||   ||||||||||    
T  20840760 attttaaatgattaatgattgcaagactagtttgctaggattagcgattacagttaccaattttt 20840824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 393
Target Start/End: Complemental strand, 24547301 - 24547261
Alignment:
Q  353 gacgaaattttaaataattaatgattgcaagtctagtttgc 393  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  24547301 gacgaaattttaaatgattaatgattgcaaggctagtttgc 24547261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 18247404 - 18247463
Alignment:
Q  364 aaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||| ||||||||||||||| ||||||||| || |||||||||||||  |||||| ||||    
T  18247404 aaatgattaatgattgcaagactagtttgcaaggattagcgaatacagagaccaaatttt 18247463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 33871590 - 33871673
Alignment:
Q  291 ttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||||||||  | |||||| ||| | ||||| | |||  || ||||||||||||||| |||||    
T  33871590 ttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaagttggtcaaatgacgaaattttaaatgattaa 33871673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 21287904 - 21287938
Alignment:
Q  286 ggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  21287904 ggtatttttgtccattcccatgccattttgctaat 21287938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 37992604 - 37992645
Alignment:
Q  352 ggacgaaattttaaataattaatgattgcaagtctagtttgc 393  Q
    |||||||||||||||  ||||||||||||||| |||||||||    
T  37992604 ggacgaaattttaaacgattaatgattgcaaggctagtttgc 37992645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 326 - 423
Target Start/End: Original strand, 69255 - 69352
Alignment:
Q  326 acgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||| | ||||| | |||| |||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  69255 acgtggcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 69352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 139927 - 140028
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  |||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||    
T  139927 agtgacgtggcagttattaagttggtcaaaggactaaattttaaataattaatgattgcaaggctagtttgcaagaattagtgaatacagggaccaattt 140026  T
Q  422 tt 423  Q
    ||    
T  140027 tt 140028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 423
Target Start/End: Complemental strand, 5142 - 5003
Alignment:
Q  285 gggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaag 383  Q
    |||||||||||||| || ||||||||||||||||||  | ||||||||||   ||||| | |||  |||||||||||||||||| |||||| ||||||||    
T  5142 gggtatttttgtccttttccatgtcattttgctaatttgatgacgtggcagcgattaattaggtcaaaggacgaaattttaaatgattaataattgcaag 5043  T
Q  384 tctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||||| || ||||||||||| | ||| ||||||||    
T  5042 gctagtttgcaaggattagcgaatatagggatcaattttt 5003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 423
Target Start/End: Original strand, 6227 - 6365
Alignment:
Q  286 ggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagt 384  Q
    ||||||||||||| |||| ||| || |||||||||  | |||||||||| | ||||| |||||| | | |||||||||||||| |||||  ||||||||     
T  6227 ggtatttttgtcctttcctatgccactttgctaatttgatgacgtggcagtcattaagtgggttaaggaacgaaattttaaatgattaaacattgcaagg 6326  T
Q  385 ctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     || ||||| || |||| ||| || | ||||||||||||    
T  6327 gtaatttgcaaggattatcgattataaggaccaattttt 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 37678 - 37605
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||||| ||||||||||||    
T  37678 aaggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcgaatacaaggaccaattttt 37605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 6393 - 6466
Alignment:
Q  350 aaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||| || ||||||||||||| ||||||||||||    
T  6393 aaggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatacagggaccaattttt 6466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 423
Target Start/End: Original strand, 11379 - 11525
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatga 376  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  | |||||||||| | ||||| | |||  || ||||||||||||||| |||||  |    
T  11379 atgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaaca 11478  T
Q  377 ttgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
     ||||||  ||  |||| || |||| ||| ||||||||| |||||||    
T  11479 atgcaagggtaaattgccaggattaacgattacatggactaattttt 11525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 11322 - 11231
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||| ||||| | ||||| | |||  |||||||||||||||||| |||||    
T  11322 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 11231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 14571 - 14470
Alignment:
Q  322 agtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattt 421  Q
    |||||||||||| | ||||| | |||  || ||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||| || ||| |||||    
T  14571 agtgacgtggcagtgattaagttggtcaaaagacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaataaatagactaattt 14472  T
Q  422 tt 423  Q
    ||    
T  14471 tt 14470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 423
Target Start/End: Complemental strand, 1105 - 961
Alignment:
Q  280 gatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgatt 378  Q
    |||||||||||||||||||||||||||| ||||||||||||  | |||| || || | ||||| | |||  |||||||||||||||||| |||||  | |    
T  1105 gatgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaat 1006  T
Q  379 gcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||  ||  |||| |  |||||||| ||||||||| |||||||    
T  1005 gcaagggtaaattgccaagattagcgattacatggactaattttt 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 20035 - 19898
Alignment:
Q  287 gtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaatgattgcaagtc 385  Q
    ||||||||||||||||||||| ||||||||||||  | ||||||| || | ||||| | |||| | | |||||||||||||| ||||| || |||||       
T  20035 gtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtcattaattaggttaatgaacgaaattttaaatgattaaagaatgcaaagg 19936  T
Q  386 tagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    || ||||| || ||||||||  ||| ||||||||||||    
T  19935 taatttgcaaggattagcgatcacagggaccaattttt 19898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 12486 - 12574
Alignment:
Q  286 ggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||| ||||||||||||||||||||||  | |||||||||| | ||||| | |||  ||| |||||||||||||| |||||    
T  12486 ggtatttttgtctattcccatgtcattttgctaatttgatgacgtggcagtgattaagtaggtcaaagaacgaaattttaaatgattaa 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 12421 - 12384
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaat 320  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  12421 gaggatatttttgtccatttccatgtcattttgctaat 12384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 221976 - 221881
Alignment:
Q  278 atgatgagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  | |||||||||| | ||||| |  ||  |||||||||||||||||| |||||    
T  221976 atgatgagggtatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaagt-tgtcaaaggacgaaattttaaatgattaa 221881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 222033 - 222124
Alignment:
Q  283 gagggtatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||||||||| ||||||| ||||  | |||| ||||| | ||||| | |||  |||||||||||||||||| |||||    
T  222033 gagggtatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 24625 - 24683
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||||||| |||||||||||| |||  ||| ||||||||||| |||||    
T  24625 gctaatcagtgacgtggcagtaattaactgggctcagagacaaaattttaaatgattaa 24683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 12029 - 12115
Alignment:
Q  288 tatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    ||||||||||||||| |||| ||||||||||||  | |||||||||| | ||||| | |||  |||||||||||||||||| |||||    
T  12029 tatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 2570 - 2484
Alignment:
Q  288 tatttttgtccattcccatgtcattttgctaatcag-tgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||||||||||| ||||||||||||  | | |||||| | | ||||| | |||  |||||||||||||||||| |||||    
T  2570 tatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaa 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 239830 - 239888
Alignment:
Q  315 gctaatcagtgacgtggcaataattaactgggttcaaggacgaaattttaaataattaa 373  Q
    |||||||||||| |||||| ||||||| |||||  | |||||||||||||||| |||||    
T  239830 gctaatcagtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaa 239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 2059 - 2128
Alignment:
Q  354 acgaaattttaaataattaatgattgcaagtctagtttgcgagaattagcgaatacatggaccaattttt 423  Q
    |||||||||||||| |||||||||||||||  |||||||| |  |||||| | | || ||||||||||||    
T  2059 acgaaattttaaatgattaatgattgcaaggatagtttgcaaagattagcaatttcagggaccaattttt 2128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1202 times since January 2019
Visitors: 2389