View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0208-Insertion-12 (Length: 403)
Name: NF0208-Insertion-12
Description: NF0208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0208-Insertion-12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 7 - 403
Target Start/End: Complemental strand, 6881904 - 6881507
Alignment:
| Q |
7 |
attatatagattacttattaagtctttcgaccaaaaaagattacttattaagcaaagcactacaatgcatgaaagataatgtgcaagctttggataactg |
106 |
Q |
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| T |
6881904 |
attatatagattacttattaagtctttcgaccaaaaaagattacttattaagcaaagcactacaatgcatgaaagataatgtgcaagctttggataactg |
6881805 |
T |
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| Q |
107 |
gctcattttaatgcaagataggatttctccagaaaatgcaagatacatttcttatagccttgccattgtgctaggcaatgcattaatgtaagtcatgatc |
206 |
Q |
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| T |
6881804 |
gctcattttaatgcaagataggatttctccagaaaatgcaagatacatttcttatagccttgccattgtgctaggcaatgcattaatgtaagccatgatc |
6881705 |
T |
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| Q |
207 |
ttataattagattgagtttgagaagaaattatgtggttggcttaaatgtattggctaaatttgacaacaaatcttaatatgtattcagtatccaaatcaa |
306 |
Q |
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| T |
6881704 |
ttataattagattgagtttgagaagaaattatgtggttggcttaaatgtattggctaaatttgacaacaaatcttaatatgtattcagtatccaaatcaa |
6881605 |
T |
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| Q |
307 |
tgatag-catatagactatggttgccttaaagttgatagtaaacttgttcaattctgatgtgcaattcagtactgagaattcaggttcaactgtaacc |
403 |
Q |
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| T |
6881604 |
tgatagacatatagactatggttgccttaaagttgatagtaaacttgttcaattctgatgtgcaattcagtactgagaattcaggttcaaccgtaacc |
6881507 |
T |
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