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This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0208-Insertion-7 (Length: 155)
Name: NF0208-Insertion-7
Description: NF0208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0208-Insertion-7
[» ] chr4 (18 HSPs)
[» ] scaffold0221 (1 HSPs)
[» ] scaffold0608 (1 HSPs)
[» ] scaffold0147 (1 HSPs)
Alignment Details
Target: chr4 (Bit Score: 144; Significance: 5e-76; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 5e-76
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 18782820 - 18782673
Alignment:
Q
8
aaataatcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgttta
107
Q
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
18782820
aaataatcttggagaacttgtgaaaataagttgaaaatagctgaaaaacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgttta
18782721
T
Q
108
tgccagcacataaattcaaataagttaatccgaaaagaccatattacc
155
Q
||||||||||||||||||||||||||||||||||||||||||||||||
T
18782720
tgccagcacataaattcaaataagttaatccgaaaagaccatattacc
18782673
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2996594 - 2996665
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| | | ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||
T
2996594
atcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctc
2996665
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 19395102 - 19395049
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||| ||||||||||||| ||||||||| ||||||| ||| ||||||||||
T
19395102
aaataagctgaaaatagcttataaacatgtcgtaagttgtttttataagttctc
19395049
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 23459649 - 23459725
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaa
89
Q
|||||| | ||||| |||| |||||||||||||| |||| ||||||||||||| | |||||||||||||| ||||
T
23459649
atcttgaaaaacttatgaatataagttgaaaataacttattaacatgtcataagcttttttcataagttctccgaaa
23459725
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 55064856 - 55064928
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagct-taaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| |||||||||| |||||| |||| | ||| ||||||||||||| ||||| ||||||||
T
55064856
atcttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagttctc
55064928
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 27123397 - 27123330
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||| ||| || |||||||||||||| | |||||| ||||||||||||||| || |||||| ||||
T
27123397
tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctc
27123330
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 28300348 - 28300277
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||| ||| ||| ||||||||||||||||| | ||||| ||||||||||| | || |||||||| |||||
T
28300348
atcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctc
28300277
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 55414469 - 55414406
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttca
75
Q
|||||||||||||| ||||||||||||||||| |||||| ||| |||||||||| || |||||
T
55414469
atcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttca
55414406
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 22662278 - 22662225
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||| ||||||||||||| ||||| ||||||||| ||||||||||||||
T
22662278
aaataagctgaaaatagcttatgaacatatcataagtttttttcataagttctc
22662225
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 1965980 - 1966028
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
||||||||| |||| |||||| |||||||||||||||| |||||||||
T
1965980
aaataagttaaaaacagcttatgaacatgtcataagttgttttcataag
1966028
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 17822914 - 17822842
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| |||||||||| | |||| |||||| ||| |||||||||| || ||||||| ||||||
T
17822914
atcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctc
17822842
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 27124181 - 27124137
Alignment:
Q
25
ttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
|||||||||||| |||||||||||||| | |||||| ||||||||
T
27124181
ttgtgaaaataaattgaaaatagcttatagacatgtaataagttg
27124137
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 45214391 - 45214463
Alignment:
Q
13
atcttggagaacttg-tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| | |||||||| ||||||||| || ||| |||||||||||| ||||||||||||||
T
45214391
atcttggagaacttaataaaaataagctgaaaatagattgtgaacgtgtcataagttgatttcataagttctc
45214463
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 52259652 - 52259696
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaaca
57
Q
|||| ||||| ||| |||||||||||||||||||||||| |||||
T
52259652
atctgggagagcttatgaaaataagttgaaaatagcttataaaca
52259696
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 42121509 - 42121563
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagtt
68
Q
||||||||||||||||| ||||||| || ||| |||||| |||||||||||||||
T
42121509
atcttggagaacttgtggaaataagctg-aaacagcttatgaacatgtcataagtt
42121563
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 49803230 - 49803297
Alignment:
Q
14
tcttggagaacttgtgaaaataagttgaaaatagcttaaaaaca-tgtcataagttgctttcataagt
80
Q
||||||||||||| || |||||| |||||| |||| | |||| |||||||||||||||||||||||
T
49803230
tcttggagaacttaagacaataagctgaaaacagctaatgaacaatgtcataagttgctttcataagt
49803297
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 50662784 - 50662749
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
|||||||| |||||||||||||||||||| ||||||
T
50662784
ttggagaaattgtgaaaataagttgaaaaaagctta
50662749
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 50800074 - 50800008
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| || ||||||| |||||| |||||| | ||||||||||||||| || ||| |||||||
T
50800074
tggagaactt-tggaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctc
50800008
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 1e-20; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 20368228 - 20368158
Alignment:
Q
14
tcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||
T
20368228
tcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctc
20368158
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31624111 - 31624181
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
||||||||||| || ||||||||||||||||| |||||| ||||||||||||| || |||||||||||||
T
31624111
atcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttct
31624181
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 2455279 - 2455352
Alignment:
Q
12
aatcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctc
84
Q
|||||||||||| ||||||||||||| |||||| | |||| |||| |||| |||||||| ||||||||||||||
T
2455279
aatcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctc
2455352
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 1575931 - 1575986
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
|||||||||||| |||| |||||| |||||||||||||||| |||||||||||||
T
1575931
tgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct
1575986
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 33832307 - 33832251
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| | |||| | |||| ||||||||||||||||| ||||||||||||||
T
33832307
tgaaaataagctaaaaacaacttataaacatgtcataagttgttttcataagttctc
33832251
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 2263254 - 2263309
Alignment:
Q
54
aacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatg
109
Q
||||||||||| |||| |||||||||||||| ||| |||||||||| ||||||||
T
2263254
aacatgtcatatgttgttttcataagttctctcaaacagtttcttaagtgtttatg
2263309
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 2460196 - 2460129
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||| ||| || |||||||||||||| | |||||| ||||||||||||||| || |||||| ||||
T
2460196
tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctc
2460129
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9912237 - 9912163
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaaca-tgtcataagttgctttcataagttctcggaaa
89
Q
||||||||||| |||||||||| | |||| |||||| |||| ||||||||| || |||||||||||||| ||||
T
9912237
ttggagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaa
9912163
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 769175 - 769228
Alignment:
Q
29
gaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttc
82
Q
|||| ||||||||||| |||||| ||||||||||||| || ||||||||||||
T
769175
gaaagtaagttgaaaacagcttatgaacatgtcataagatgttttcataagttc
769228
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 17770493 - 17770448
Alignment:
Q
23
acttgtgaaaataagttgaaaatagcttaaaaacatgtcataagtt
68
Q
|||| |||||||||||||||||||| ||| |||||||||||||||
T
17770493
acttatgaaaataagttgaaaatagtttatgaacatgtcataagtt
17770448
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 2460980 - 2460936
Alignment:
Q
25
ttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
|||||||||||| |||||||||||||| | |||||| ||||||||
T
2460980
ttgtgaaaataaattgaaaatagcttatagacatgtaataagttg
2460936
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 7148691 - 7148743
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
|||||| ||| |||||||||||||||||||||||| ||| |||||||||||
T
7148691
tggagagcttatgaaaataagttgaaaatagcttatggacaagtcataagttg
7148743
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 7931757 - 7931709
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
||||||| |||||| | ||||| |||||||||||||||| |||||||||
T
7931757
aaataagctgaaaacaacttaagaacatgtcataagttgttttcataag
7931709
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 26559247 - 26559163
Alignment:
Q
54
aacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatgccagcacataaattcaaataagttaatcc
138
Q
||||| |||||||||| ||||||||||||| ||| ||| || ||||| ||||||||| | |||| ||||||||||||||||
T
26559247
aacatatcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatcc
26559163
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 9e-16; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7674669 - 7674739
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
||||||||||| ||||||||||||| |||||| | |||| ||||||||||||||||| || ||||||||||
T
7674669
atcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttct
7674739
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 39105485 - 39105557
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctc
84
Q
|||||||||||||| |||||||||| | ||||||||||| ||| |||||||||| || |||||||| |||||
T
39105485
atcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctc
39105557
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 10125763 - 10125696
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||| ||| |||||||||| |||||| | |||| |||||||||||||||| || |||||||||||
T
10125763
tggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctc
10125696
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 16458025 - 16457956
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta--aaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||||||||||||| |||||| |||||| ||||| ||||||||| || ||||||||||||||
T
16458025
ttggagaacttgtgaaaataaactgaaaagagcttatgaaaac-tgtcataagctgttttcataagttctc
16457956
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 12467169 - 12467210
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
|||||||||| |||||| |||||| |||||||||||||||||
T
12467169
tgaaaataagctgaaaacagcttataaacatgtcataagttg
12467210
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 25705697 - 25705652
Alignment:
Q
24
cttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
||||||||||||||||||||| |||||| | |||||||| ||||||
T
25705697
cttgtgaaaataagttgaaaacagcttatagacatgtcacaagttg
25705652
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 12425592 - 12425623
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaa
44
Q
|||||||||||||| |||||||||||||||||
T
12425592
atcttggagaacttatgaaaataagttgaaaa
12425623
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 84
Target Start/End: Original strand, 15246899 - 15246926
Alignment:
Q
57
atgtcataagttgctttcataagttctc
84
Q
||||||||||||||||||||||||||||
T
15246899
atgtcataagttgctttcataagttctc
15246926
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 17368697 - 17368768
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| || || ||||||| |||||| || || |||||||||||||||| ||||||||||||||
T
17368697
atcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctc
17368768
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 30988115 - 30988068
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttca
75
Q
||||||||||||||||| || | | ||||||||||||||||| |||||
T
30988115
tgaaaataagttgaaaagagttgacaaacatgtcataagttggtttca
30988068
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 24)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 24915099 - 24915034
Alignment:
Q
14
tcttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataa
78
Q
||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||
T
24915099
tcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgttttcataa
24915034
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 6262044 - 6262107
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
||||||| |||||| ||||||||||||||||||||| |||||||||||||||| | |||||||
T
6262044
ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttctcataag
6262107
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 4445731 - 4445800
Alignment:
Q
15
cttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||| ||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||| |||||
T
4445731
cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctc
4445800
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 2777915 - 2777984
Alignment:
Q
15
cttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||| |||||||||| |||||| ||||| || | ||||||||||| ||||||||||||||
T
2777915
cttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagttctc
2777984
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 37473424 - 37473496
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| |||||||||| || ||| |||||| ||| ||||||||||||| ||||| ||||||||
T
37473424
atcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctc
37473496
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 29635380 - 29635439
Alignment:
Q
25
ttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||||| |||||| | |||| ||||||||||||| ||| |||||||| |||||
T
29635380
ttgtgaaaataagctgaaaacaacttataaacatgtcataacttgttttcataaattctc
29635439
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 35925729 - 35925780
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttc
82
Q
|||||||||||||| |||||| ||||||||||||| || ||||||||||||
T
35925729
aaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc
35925780
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 2295123 - 2295189
Alignment:
Q
19
gagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||||||||||||| | |||||| ||| ||||||||| || ||||||||||||||
T
2295123
gagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctc
2295189
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3887676 - 3887610
Alignment:
Q
18
ggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttct
83
Q
||||||||| |||||||||||| |||| |||||| ||| |||||||||| || |||||||||||||
T
3887676
ggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttct
3887610
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 7137047 - 7136977
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
|||||||||||||| |||||||||| |||||||| |||| || |||||||||| |||||||||||||
T
7137047
atcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagcgattttcataagttct
7136977
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7941632 - 7941698
Alignment:
Q
18
ggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttct
83
Q
||||||||| ||||||||||||||||||||||| ||| |||||||||| || |||||||| ||||
T
7941632
ggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattct
7941698
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 10799486 - 10799535
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataa
65
Q
||||||||||| |||||||||| |||||| || ||| |||||||||||||
T
10799486
ttggagaacttatgaaaataagctgaaaacagattataaacatgtcataa
10799535
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 10809369 - 10809422
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
||||||||||| |||||||||| |||||| | ||| |||||||||||||||||
T
10809369
ttggagaacttatgaaaataagctgaaaacatattataaacatgtcataagttg
10809422
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 37811891 - 37811944
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| || ||| ||||||||||||| || ||||||||||||||
T
37811891
aaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctc
37811944
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 41195242 - 41195189
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataag
66
Q
|||||||||||||| |||||||||| |||||| |||||| || ||||||||||
T
41195242
atcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataag
41195189
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 4481966 - 4482022
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| | |||| |||||| ||||||| |||||||| ||||||||||||||
T
4481966
tgaaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctc
4482022
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 5709651 - 5709679
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaa
44
Q
|||||||||||||||||||||||||||||
T
5709651
ttggagaacttgtgaaaataagttgaaaa
5709679
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 10280677 - 10280741
Alignment:
Q
20
agaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||| |||||||||| ||| || |||||| |||||| |||||||| ||||||||||||||
T
10280677
agaacttatgaaaataagctgacaaaagcttatgaacatgaaataagttgttttcataagttctc
10280741
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 15942797 - 15942725
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaata-gcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| | ||||||| |||||| | ||||| |||||||||||||||| |||||||| |||||
T
15942797
atcttggagaacttattgaaataagctgaaaacatgcttatgaacatgtcataagttgttttcataaattctc
15942725
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 23895350 - 23895402
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataa
65
Q
|||||||||| |||||| ||||||||| ||||||||||| |||||| |||||
T
23895350
atcttggagagcttgtggaaataagttaaaaatagcttacgaacatgccataa
23895402
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 473188 - 473223
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||| ||||||||||||||||| ||||||
T
473188
ttggagaacttatgaaaataagttgaaaaaagctta
473223
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 1509775 - 1509810
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
|||||||||||||| |||||||||||||| ||||||
T
1509775
ttggagaacttgtgtaaataagttgaaaaaagctta
1509810
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 3234061 - 3233992
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta--aaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||| ||||||||||| ||||| | |||| ||||| ||| |||||||| ||||||||||||||
T
3234061
ttggagaacttatgaaaataagtagaaaaaaacttatgaaaac-tgttataagttgttttcataagttctc
3233992
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 51695544 - 51695473
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttct
83
Q
||||||||||| || |||||||||| ||||||||||||| ||| |||| |||||||| || |||||||||
T
51695544
atcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttct
51695473
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 680524 - 680589
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataa
78
Q
|||||| |||||||||||||||||| |||||| || ||| |||||||||||||| || ||||||||
T
680524
atcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataa
680589
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 24347746 - 24347819
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaa
89
Q
||||||||||| |||||||||| |||| || ||||| ||| | ||||||||||||||||||||||||| ||||
T
24347746
ttggagaacttatgaaaataagctgaatatggcttatgaacctatcataagttgctttcataagttctctgaaa
24347819
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16451139 - 16451211
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctc
84
Q
||||||||||||| ||||||||||| |||||| |||| | ||| ||||||||||||| ||||||||||||||
T
16451139
atcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctc
16451211
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 1893330 - 1893275
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagtt
68
Q
||||||||||||||||||||||||| |||||||| |||| ||||||||||||||
T
1893330
atcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagtt
1893275
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 43279575 - 43279506
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||||||||||||||||||||| |||||| ||| ||||||||| || |||||||| |||||
T
43279575
ttggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctc
43279506
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 12194976 - 12195011
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||||||||||||||||||||| ||||||
T
12194976
ttggagaacttgtgaaaataagttgaaaaaagctta
12195011
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 26202052 - 26202174
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatgccagc
114
Q
||||||||||| ||||||||||||||||| |||||| ||| |||||||||||| | |||||| |||| | ||||| | || ||| ||||| ||||
T
26202052
ttggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattctagcaaagaatctcacaaa-acttatgtcagc
26202150
T
Q
115
acataaattcaaataagttaatcc
138
Q
| |||| |||||||||||||||||
T
26202151
agataagttcaaataagttaatcc
26202174
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 12464522 - 12464485
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagctt
50
Q
||||||||||||||||||||||||| |||||| |||||
T
12464522
atcttggagaacttgtgaaaataagctgaaaaaagctt
12464485
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 13220453 - 13220525
Alignment:
Q
11
taatcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||| |||||| || ||||||||| |||| |||||| |||| ||||||||||| ||| ||||||||||
T
13220453
taatcttgg-gaacttatgcaaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctc
13220525
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 18066149 - 18066218
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagtt
81
Q
|||||||||||||| ||||||||| ||||||||||||| | | |||||||||| || |||||||||||
T
18066149
atcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagtt
18066218
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 43530142 - 43530089
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||||||||| |||||||||||| || ||||||||||||||
T
43530142
aaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagttctc
43530089
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 10285887 - 10285947
Alignment:
Q
19
gagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
|||||||| || |||||||||||||| |||||| |||||||||||||| |||||||||
T
10285887
gagaacttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataag
10285947
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 33941930 - 33941998
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagtt
81
Q
|||||||||| || ||| |||||||||||| |||||| ||| |||||||||||| |||||||||||
T
33941930
atcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataagtt
33941998
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 34652085 - 34652029
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
|||||||||| ||| || |||||||||||||| |||||| |||||||||||||||
T
34652085
atcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttg
34652029
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 35378582 - 35378510
Alignment:
Q
12
aatcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||| | ||| |||||||||| |||||||| |||| |||| ||||| || || ||||||||||||||
T
35378582
aatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgttttcataagttctc
35378510
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 12289821 - 12289856
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||| ||||||||||||||||| ||||||
T
12289821
ttggagaacttatgaaaataagttgaaaaaagctta
12289856
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 16398520 - 16398449
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||||||| | ||| ||| |||| | |||||| ||||||||||||||| ||||||| ||||||
T
16398520
atcttggagaacttgcgtaaaaaaggtgaagacagcttatggacatgtcataagttgttttcatatgttctc
16398449
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 38809351 - 38809418
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||| ||| || |||||||||||||| || ||| ||||||||||||| || ||| ||||||||||
T
38809351
tggagagcttatggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctc
38809418
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.000000000003; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 43504772 - 43504848
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaa
89
Q
|||||||||||||| || ||||||| |||||| |||||| ||||| ||| ||||||| |||||| ||||||| ||||
T
43504772
atcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatcagttctccgaaa
43504848
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 43368734 - 43368683
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
|||||||||||||||||||||| | |||||||||||||||| |||||||||
T
43368734
tgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataag
43368683
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 21653102 - 21653163
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttc
74
Q
|||||||||| ||| |||||||||| ||||||||||||| ||| |||||||||||| ||||
T
21653102
atcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagttgatttc
21653163
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 10358602 - 10358667
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagtt
81
Q
||||||||||||||||||||| | ||||| |||| ||||||||||||||| |||||||||||
T
10358602
ttggagaacttgtgaaaataaatcgaaaacgacttatgaacatgtcataagttattttcataagtt
10358667
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 26473795 - 26473730
Alignment:
Q
19
gagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||| ||| |||||||||||| ||| ||||||| | |||||||||||| || ||||||||| ||||
T
26473795
gagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttcataagctctc
26473730
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 42597459 - 42597512
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataag
66
Q
|||||||| ||||| || |||||||||||||| |||||| | ||||||||||||
T
42597459
atcttggataacttatggaaataagttgaaaacagcttatagacatgtcataag
42597512
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 45098978 - 45098922
Alignment:
Q
57
atgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatgccag
113
Q
||||||||||||| ||||||| ||||||||||| | | ||| || ||||||||||||
T
45098978
atgtcataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccag
45098922
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 778413 - 778480
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
||||||| ||| ||||| ||||||||||| | |||| |||| |||| || |||| |||||||||||||
T
778413
ttggagagcttatgaaagtaagttgaaaacaacttacaaacgtgtcttatgttgttttcataagttct
778480
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 9700028 - 9700147
Alignment:
Q
19
gagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatgccagcacat
118
Q
|||| ||| |||||||||| |||||| |||||| ||||||||||| ||| ||||| ||| |||| ||| ||| || || ||||||||| || | ||
T
9700028
gagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagat
9700127
T
Q
119
aaattcaaataagttaatcc
138
Q
|| ||||||||||||||||
T
9700128
aagctcaaataagttaatcc
9700147
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 31875629 - 31875578
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
|||||||||||||||||| ||||| ||||||||||||||| || ||||||
T
31875629
tgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataag
31875578
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38307683 - 38307750
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagt
80
Q
||||||||||| || |||||||||| |||| ||||||| ||||||||| ||||| ||||||||||
T
38307683
atcttggagaaattatgaaaataagccgaaagtagcttatgcacatgtcattagttgttttcataagt
38307750
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 43045771 - 43045736
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||| ||||||||||||||||| ||||||
T
43045771
ttggagaacttatgaaaataagttgaaaaaagctta
43045736
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000003; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 25670635 - 25670567
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagtt
81
Q
|||||||||| |||||||||||||| |||||| | ||| |||||||||||||||| |||||||||||
T
25670635
atcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagtt
25670567
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 15740445 - 15740390
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
|||||||||||| |||| |||||| |||||||||||||||| |||||||||||||
T
15740445
tgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct
15740390
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 30535599 - 30535703
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatgccagcacataaattcaaa
127
Q
||||||||| |||||| |||||| ||||| |||||||||| |||||||||||||| ||| ||| ||| || |||||||| ||| | || || |||||
T
30535599
tgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctctcaagtgtttatgtcagtaaattaactcaaa
30535698
T
Q
128
taagt
132
Q
|||||
T
30535699
taagt
30535703
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 33678801 - 33678873
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctc
84
Q
|||||||| ||||||||||||||||||||||| | || | ||| |||| |||||||| ||||||||||||||
T
33678801
atcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctc
33678873
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 34035938 - 34036009
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttct
83
Q
||||| ||||||||| |||||||||||||||| | |||| ||| |||||||||||| |||||||||||||
T
34035938
atcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttct
34036009
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 47130834 - 47130803
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaa
44
Q
||||||||||||||||||||||||||||||||
T
47130834
atcttggagaacttgtgaaaataagttgaaaa
47130803
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 420384 - 420453
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagc-ttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||| ||||||||||||||||| || ||| ||| |||||||| ||| ||||||||||||||
T
420384
ttggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttttcataagttctc
420453
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 11619204 - 11619135
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||| ||||| ||||||||||| |||||| ||| |||||||||||| |||||||| |||||
T
11619204
ttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctc
11619135
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 11048058 - 11048118
Alignment:
Q
23
acttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
|||| ||| |||||| |||||| |||||| |||||||||||||||| ||| |||||||||
T
11048058
acttatgagaataagctgaaaacagcttatgaacatgtcataagttgttttgataagttct
11048118
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 29768671 - 29768635
Alignment:
Q
30
aaaataagttgaaaatagcttaaaaacatgtcataag
66
Q
|||||||||||||||||||||| | ||||||||||||
T
29768671
aaaataagttgaaaatagcttatagacatgtcataag
29768635
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 47303425 - 47303457
Alignment:
Q
12
aatcttggagaacttgtgaaaataagttgaaaa
44
Q
|||| ||||||||||||||||||||||||||||
T
47303425
aatcctggagaacttgtgaaaataagttgaaaa
47303457
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 529396 - 529451
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagtt
68
Q
|||||||||| ||| |||||||| |||||||| |||||| ||| |||||||||||
T
529396
atcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagtt
529451
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 9050656 - 9050687
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaa
44
Q
||||||||||||||||||||||||| ||||||
T
9050656
atcttggagaacttgtgaaaataagctgaaaa
9050687
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 19719047 - 19719098
Alignment:
Q
33
ataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||| |||||| || ||| |||||||||||||||| ||||||||||||||
T
19719047
ataagctgaaaacagtttatgaacatgtcataagttgttttcataagttctc
19719098
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 39279978 - 39280021
Alignment:
Q
8
aaataatcttggagaacttgtgaaaataagttgaaaatagctta
51
Q
|||| |||||||||||||| |||||||||| |||||| ||||||
T
39279978
aaattatcttggagaacttttgaaaataagctgaaaaaagctta
39280021
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 39967947 - 39968014
Alignment:
Q
19
gagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctcg
85
Q
||||||| ||||||||||||||||| |||||| ||| ||| |||||| || |||||||||||||||
T
39967947
gagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctcg
39968014
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.00000000005; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 5391910 - 5391968
Alignment:
Q
23
acttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagtt
81
Q
|||| ||||||||||||||||| |||||| ||||||||||||| || |||||||||||
T
5391910
acttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagtt
5391968
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 29427676 - 29427623
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||||||||||||| |||||||||| || || ||||||||||||||
T
29427676
aaataagttgaaaatagcttatgaacatgtcattaggtgttttcataagttctc
29427623
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 39980753 - 39980822
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta-aaaacatgtcataagttgctttcataagttctc
84
Q
||||||||||| ||||||||||||||||| |||||| |||| |||||||| || ||||||||||||||
T
39980753
ttggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctc
39980822
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3044304 - 3044252
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttg
69
Q
|||||| ||| ||||||||||||||||| |||||| ||||||||||||||||
T
3044304
tggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttg
3044252
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 21367688 - 21367760
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctc
84
Q
|||||||||||||| |||||||||| |||||| ||||| ||| |||||||||| || ||||||||||||||
T
21367688
atcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctc
21367760
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 52619024 - 52619076
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataa
65
Q
|||||| ||| |||||||||||||| ||||||||||||| ||||||||||||
T
52619024
atcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataa
52619076
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 2175876 - 2175833
Alignment:
Q
35
aagttgaaaatagcttaaaaacatgtcataagttgctttcataa
78
Q
|||||||||| |||||| ||||||||||||||||| ||||||||
T
2175876
aagttgaaaacagcttacaaacatgtcataagttgttttcataa
2175833
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 7301360 - 7301391
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaa
44
Q
||||||||||||||||||||||||||||||||
T
7301360
atcttggagaacttgtgaaaataagttgaaaa
7301391
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 25925767 - 25925818
Alignment:
Q
17
tggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagtt
68
Q
|||||| ||| ||||||||||||||||| |||||| |||||||||||||||
T
25925767
tggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt
25925818
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 35696262 - 35696297
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||||||||||||||||||||| ||||||
T
35696262
ttggagaacttgtgaaaataagttgaaaaaagctta
35696297
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 37273155 - 37273226
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||||||| || |||||||||||||| | |||| ||||||||||||||| || |||||| ||||
T
37273155
atcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctc
37273226
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 2304292 - 2304202
Alignment:
Q
41
aaaatagcttaaaaacatgtcataagttgctttcataagttctcggaaagagtttcttaaatgtttatgccagcacataaattcaaataag
131
Q
|||| |||||| ||||||||||||||||||||||||| ||||| ||| |||||| || ||||||||| || | || | ||||||||||
T
2304292
aaaacagcttatgaacatgtcataagttgctttcataatttctctcaaatagtttcacaagtgtttatgctagtagatcagttcaaataag
2304202
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 28240340 - 28240410
Alignment:
Q
14
tcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||| |||||||| |||||||||||||||||||||| || |||||||||| || |||| |||||||||
T
28240340
tcttcgagaacttaggaaaataagttgaaaatagctttgaacaatgtcataagctgttttcctaagttctc
28240410
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 45541592 - 45541662
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttct
83
Q
|||||||| ||||| ||| ||||| |||||| |||||| ||||||||||||| || |||||||||||||
T
45541592
atcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttct
45541662
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 42747832 - 42747759
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaaca-tgtcataa-gttgctttcataagttctc
84
Q
|||||||| ||||| |||||||||| ||||| |||||| ||||| |||||||| |||| ||||||||||||||
T
42747832
atcttggataacttctgaaaataaggagaaaacagcttataaacaatgtcataaagttgttttcataagttctc
42747759
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 402591 - 402519
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaac-atgtcataagttgctttcataagttctc
84
Q
|||||| ||||||||||||| |||| |||||| |||||| ||| |||||||||| || ||||||| ||||||
T
402591
atcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctc
402519
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 3845611 - 3845559
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataa
65
Q
|||||||||||||| |||||||||| |||||| || ||| ||| |||||||||
T
3845611
atcttggagaacttatgaaaataagctgaaaaaagattataaaaatgtcataa
3845559
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 24085387 - 24085315
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaaca-tgtcataagttgctttcataagttctc
84
Q
||||||||||||||||||||||||| |||||| ||| || |||| | |||||| || ||||||||||||||
T
24085387
atcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctc
24085315
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 48300514 - 48300478
Alignment:
Q
30
aaaataagttgaaaatagcttaaaaacatgtcataag
66
Q
|||||||||||||||||||||| | ||||||||||||
T
48300514
aaaataagttgaaaatagcttatacacatgtcataag
48300478
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 50004691 - 50004739
Alignment:
Q
31
aaataagttgaaaatagcttaaaaacatgtcataagttgctttcataag
79
Q
||||||| |||||| ||||||| |||||||||||||||| || ||||||
T
50004691
aaataagctgaaaacagcttaagaacatgtcataagttgtttccataag
50004739
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 901948 - 901983
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||| ||||||||||||||||| ||||||
T
901948
ttggagaacttatgaaaataagttgaaaaaagctta
901983
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 2152205 - 2152162
Alignment:
Q
35
aagttgaaaatagcttaaaaacatgtcataagttgctttcataa
78
Q
|||||||||| |||||| |||||||||||||||| ||||||||
T
2152205
aagttgaaaacagcttacgaacatgtcataagttgttttcataa
2152162
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 30573963 - 30573892
Alignment:
Q
13
atcttggagaacttgtgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| || |||| ||||| |||||| |||||| |||||| ||||| ||| ||||||||||||||
T
30573963
atcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctc
30573892
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 46478713 - 46478748
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaatagctta
51
Q
||||||||||| ||||||||||||||||| ||||||
T
46478713
ttggagaacttatgaaaataagttgaaaaaagctta
46478748
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0221 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0221
Description:
Target: scaffold0221; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 2796 - 2840
Alignment:
Q
22
aacttgtgaaaataagttgaaaatagcttaaaaacatgtcataag
66
Q
||||||||||||||||||||||||||||| |||||||||||||
T
2796
aacttgtgaaaataagttgaaaatagcttgtgaacatgtcataag
2840
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0608 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0608
Description:
Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 9671 - 9615
Alignment:
Q
28
tgaaaataagttgaaaatagcttaaaaacatgtcataagttgctttcataagttctc
84
Q
|||||||||| | |||| |||||| ||||||| |||||||| ||||||||||||||
T
9671
tgaaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctc
9615
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0147 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0147
Description:
Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 23655 - 23683
Alignment:
Q
16
ttggagaacttgtgaaaataagttgaaaa
44
Q
|||||||||||||||||||||||||||||
T
23655
ttggagaacttgtgaaaataagttgaaaa
23683
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
© Oklahoma State University
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