View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0208-Insertion-8 (Length: 145)
Name: NF0208-Insertion-8
Description: NF0208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0208-Insertion-8 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 134; Significance: 4e-70; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 134; E-Value: 4e-70
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 24895772 - 24895635
Alignment:
| Q |
8 |
ctttcctcatatagtcaaaagtcaaaccatgaccatgtgtattagtagataaattccaaatttacaacgccaggatttatatgttgctgagcataattaa |
107 |
Q |
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| T |
24895772 |
ctttcctcatatagtcaaaagtcaaaccatgaccatgtgtattagtagataaattccaaatttacaacgccaggatttatatgttgctgagcataattaa |
24895673 |
T |
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| Q |
108 |
atgcaggtcaaactttaagtcaacctgcagagttatag |
145 |
Q |
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| T |
24895672 |
atgcaggtcaaacttgaagtcaacctgcagagttatag |
24895635 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 134; E-Value: 4e-70
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 24910104 - 24909967
Alignment:
| Q |
8 |
ctttcctcatatagtcaaaagtcaaaccatgaccatgtgtattagtagataaattccaaatttacaacgccaggatttatatgttgctgagcataattaa |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24910104 |
ctttcctcatatagtcaaaagtcaaaccatgaccatgtgtattagtagataaattccaaatttacaacgccaggatttatatgttgctgagcataattaa |
24910005 |
T |
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| Q |
108 |
atgcaggtcaaactttaagtcaacctgcagagttatag |
145 |
Q |
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||||||||||||||||||||||| |||||||||||||| |
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| T |
24910004 |
atgcaggtcaaactttaagtcaatctgcagagttatag |
24909967 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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