View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0214_high_107 (Length: 278)
Name: NF0214_high_107
Description: NF0214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0214_high_107
Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 250
Target Start/End: Original strand, 19913245 - 19913491
Alignment:
Q
4
ggaggagcagagagtttccaagtcggagaaagattccacctccaccgccgcaggagctaccggtggtggtggttcggaggaaattgagggttcaggtgta
103
Q
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
T
19913245
ggagaagcagagagtttccaagtcggacaaagattccacctccaccgccgcaggagctaccggtggtggtggttcggaggaaattgaaggttcaggtgta
19913344
T
Q
104
acaatggggttgactaggtcagcggttggtgctgcaccaccaccttttaattgggctaatgcaacaacaaagcaagttgttcttggtgatgttttaggaa
203
Q
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
19913345
acaatggggttgaataggtcaacggttggtgctgcaccaccaccttttaattgggctaatgcaacaacaaagcaagttgttcttggtgatgttttaggaa
19913444
T
Q
204
aagggaaaattggggttggttttcaaggattgtttacacaaccatct
250
Q
|||||||||||||||||||||||||||||||||||||||||||||||
T
19913445
aagggaaaattggggttggttttcaaggattgtttacacaaccatct
19913491
T
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Alignment Overview ]
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