View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0214_high_142 (Length: 258)
Name: NF0214_high_142
Description: NF0214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0214_high_142
Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 43566084 - 43565897
Alignment:
Q
31
ttttcgatgcaaaacttttattgtcattaagaaacttgccatcatctctatttaaatttacttcatctgataaaaaatataagagatgattgcatccaca
130
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
43566084
ttttcgatgcaaaacttttattgtcattaagaaacttgccatcatctctatttaaatttacttcatctgataaaaaatataagagatgattgcatccaca
43565985
T
Q
131
aaaaatttggctaaataaatcaacttgtattaaatcaacggtatcttatatttaagatttgagtgagtactgagtatcatgaacaacc
218
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
43565984
aaaaatttggctaaataaatcaacttgtattaaatcaacggtatcttatatttaagatttgagtgagtactgagtatcatgaacaacc
43565897
T
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