View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0214_high_170 (Length: 239)
Name: NF0214_high_170
Description: NF0214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0214_high_170 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 17365389 - 17365178
Alignment:
| Q |
7 |
aactgttaatcaaaatacaacaagcttttagtagtaagacatttttaatgtttctattaaatcatttaacgagagaaaaatacactcacctcttccgagg |
106 |
Q |
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| T |
17365389 |
aactgttaatcaaaatacaacaagcttttagtagtaagacatgtttaatgtttctattaaatcatttaacgagagaaaaatacactctcctctcccaagg |
17365290 |
T |
|
| Q |
107 |
tttctctaaatgacatagacacctctattttatcacatgacactaacttttcctcccgttagaaacgtttgttgtaatttttgtgacaatttttatttca |
206 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
17365289 |
tttctctaaatgacacagacacctctattttatcacatgacactaacctttcctcccattagaaacgtttgttgtaatttttgtgacaatttttatttca |
17365190 |
T |
|
| Q |
207 |
caaatatttttg |
218 |
Q |
| |
|
|||||||||||| |
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|
| T |
17365189 |
caaatatttttg |
17365178 |
T |
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