View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0214_high_172 (Length: 225)
Name: NF0214_high_172
Description: NF0214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0214_high_172 |
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Alignment Details
Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 46837387 - 46837524
Alignment:
| Q |
1 |
ttatcattatttgctttatcattgactctcaaactagagatttt-attcgattaataattagattgagaaagttaacttttatcaagactcttagttatc |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46837387 |
ttatcattatttgctttatcattgactctcaaactagagatttttattcgattaataattagattgagaaagttaacttttatcaagactcttagttatc |
46837486 |
T |
|
| Q |
100 |
actccgctcttattgcaggtgattgatgagtatgatga |
137 |
Q |
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| T |
46837487 |
actcccctcttattgcaggtgattgatgagtatgatga |
46837524 |
T |
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