View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0214_low_176 (Length: 252)
Name: NF0214_low_176
Description: NF0214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0214_low_176 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 45438910 - 45439121
Alignment:
| Q |
12 |
attgtgacacctctattaaagagaatcaaacagaagaagaggaagaagaagccaagtggaatgagtatcttcacaatccaatgttaatactacaaaatca |
111 |
Q |
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| T |
45438910 |
attgtgacacctctattaaagagaatcaaacagaagaagaagaagaagaagccaagtggaatgagtatcttcacaatccaatgttaatgctacaaaatca |
45439009 |
T |
|
| Q |
112 |
agcatctgaatctttatgcaatgaaataaagcctgacacaaatttaggccctgatggtttaggggacatattgccacattccaagcaacaagaatcttct |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45439010 |
agcatctgaatctttatgcaatgaaataaagcctgacacaaatttaggccctgatggtttaggggacatattgccacattccaagcaacaagaatcttct |
45439109 |
T |
|
| Q |
212 |
caatcttataat |
223 |
Q |
| |
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|||||||||||| |
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| T |
45439110 |
caatcttataat |
45439121 |
T |
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