View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0214_low_200 (Length: 217)

Name: NF0214_low_200
Description: NF0214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0214_low_200
NF0214_low_200
[»] scaffold0036 (1 HSPs)
scaffold0036 (22-217)||(66332-66527)
[»] scaffold0031 (3 HSPs)
scaffold0031 (22-217)||(53559-53754)
scaffold0031 (49-161)||(36065-36171)
scaffold0031 (49-102)||(65838-65891)
[»] chr7 (71 HSPs)
chr7 (22-217)||(11312642-11312837)
chr7 (40-217)||(13635386-13635563)
chr7 (38-217)||(12318137-12318316)
chr7 (38-217)||(15580701-15580880)
chr7 (42-217)||(15605189-15605365)
chr7 (40-217)||(16583268-16583444)
chr7 (49-214)||(39722287-39722452)
chr7 (49-214)||(70685-70850)
chr7 (49-214)||(74794-74959)
chr7 (49-214)||(12714885-12715050)
chr7 (49-214)||(12718689-12718854)
chr7 (49-214)||(16114262-16114427)
chr7 (49-214)||(16117415-16117580)
chr7 (49-214)||(16907121-16907286)
chr7 (49-214)||(18283387-18283552)
chr7 (49-214)||(26292416-26292581)
chr7 (49-214)||(18279424-18279589)
chr7 (49-214)||(33128-33293)
chr7 (49-214)||(12704579-12704744)
chr7 (49-214)||(12723600-12723765)
chr7 (43-217)||(9593361-9593534)
chr7 (43-217)||(18975-19148)
chr7 (41-217)||(11987225-11987400)
chr7 (40-204)||(13918710-13918872)
chr7 (25-215)||(14429883-14430080)
chr7 (22-187)||(2832389-2832561)
chr7 (40-204)||(1859016-1859178)
chr7 (25-215)||(12321660-12321858)
chr7 (43-161)||(7519332-7519447)
chr7 (25-187)||(9751703-9751871)
chr7 (44-158)||(16457334-16457446)
chr7 (40-204)||(25927433-25927595)
chr7 (40-217)||(8917439-8917615)
chr7 (40-147)||(2530378-2530484)
chr7 (47-180)||(2760153-2760294)
chr7 (106-217)||(9644385-9644497)
chr7 (25-214)||(3271823-3272020)
chr7 (40-158)||(13149167-13149283)
chr7 (22-79)||(14152048-14152105)
chr7 (25-187)||(39267847-39268016)
chr7 (40-161)||(18425450-18425565)
chr7 (40-158)||(13461773-13461889)
chr7 (40-99)||(16275504-16275563)
chr7 (40-98)||(35151618-35151676)
chr7 (40-155)||(14216927-14217040)
chr7 (40-155)||(15728337-15728450)
chr7 (25-101)||(19649530-19649606)
chr7 (49-161)||(45169985-45170091)
chr7 (48-95)||(42204017-42204064)
chr7 (47-101)||(9446199-9446253)
chr7 (40-98)||(16724665-16724723)
chr7 (40-98)||(17701679-17701737)
chr7 (44-217)||(6801229-6801401)
chr7 (51-158)||(18556996-18557101)
chr7 (169-217)||(2530060-2530108)
chr7 (25-101)||(17138101-17138177)
chr7 (25-84)||(12187019-12187078)
chr7 (25-84)||(14932792-14932851)
chr7 (25-84)||(15356227-15356286)
chr7 (25-84)||(15360341-15360400)
chr7 (48-95)||(20569643-20569690)
chr7 (21-79)||(18430709-18430767)
chr7 (38-84)||(24054477-24054523)
chr7 (21-74)||(67745-67798)
chr7 (21-74)||(28505366-28505419)
chr7 (21-74)||(47831807-47831860)
chr7 (25-84)||(9703263-9703322)
chr7 (48-84)||(15211484-15211520)
chr7 (24-84)||(18456470-18456530)
chr7 (25-84)||(32216606-32216665)
chr7 (48-84)||(38227508-38227544)
[»] chr6 (67 HSPs)
chr6 (22-217)||(17804191-17804386)
chr6 (22-217)||(25767085-25767280)
chr6 (42-217)||(22429947-22430122)
chr6 (49-214)||(1644726-1644891)
chr6 (49-214)||(11566883-11567048)
chr6 (49-214)||(14472292-14472456)
chr6 (49-214)||(19870611-19870776)
chr6 (49-214)||(23395089-23395254)
chr6 (49-214)||(8243882-8244047)
chr6 (49-214)||(18917186-18917351)
chr6 (49-214)||(22862967-22863132)
chr6 (49-214)||(23989941-23990106)
chr6 (49-214)||(18955683-18955848)
chr6 (49-214)||(12618765-12618929)
chr6 (43-217)||(12706705-12706878)
chr6 (43-214)||(16741222-16741392)
chr6 (25-214)||(18907111-18907308)
chr6 (40-204)||(23414658-23414820)
chr6 (40-204)||(27556416-27556578)
chr6 (22-161)||(27325582-27325730)
chr6 (40-204)||(5616745-5616908)
chr6 (25-189)||(16523330-16523500)
chr6 (44-217)||(19662787-19662958)
chr6 (25-101)||(15894479-15894555)
chr6 (44-217)||(2685236-2685407)
chr6 (40-158)||(9482270-9482386)
chr6 (25-161)||(20907955-20908098)
chr6 (25-161)||(21766695-21766838)
chr6 (25-180)||(18180494-18180655)
chr6 (23-103)||(19848034-19848114)
chr6 (40-99)||(1644300-1644359)
chr6 (48-95)||(19790826-19790873)
chr6 (40-99)||(31478265-31478324)
chr6 (25-103)||(15041589-15041667)
chr6 (47-101)||(27553612-27553666)
chr6 (40-161)||(16624144-16624259)
chr6 (25-102)||(19873120-19873197)
chr6 (42-204)||(27416124-27416278)
chr6 (40-155)||(1587711-1587824)
chr6 (23-103)||(23992429-23992509)
chr6 (49-161)||(31477789-31477895)
chr6 (52-158)||(12496333-12496437)
chr6 (25-84)||(19862978-19863037)
chr6 (106-189)||(21834833-21834915)
chr6 (52-158)||(22592780-22592884)
chr6 (50-95)||(23657468-23657513)
chr6 (49-161)||(16760316-16760422)
chr6 (40-155)||(20803534-20803647)
chr6 (47-95)||(27567656-27567704)
chr6 (40-99)||(21702300-21702359)
chr6 (25-84)||(22432249-22432308)
chr6 (25-84)||(22438799-22438858)
chr6 (111-204)||(31478076-31478169)
chr6 (47-100)||(22408345-22408398)
chr6 (25-102)||(25642227-25642304)
chr6 (21-84)||(17287854-17287917)
chr6 (25-84)||(22334955-22335014)
chr6 (25-79)||(21740094-21740148)
chr6 (21-79)||(25714417-25714475)
chr6 (175-217)||(27415859-27415901)
chr6 (24-85)||(1595549-1595610)
chr6 (21-74)||(19303608-19303661)
chr6 (21-74)||(27333286-27333339)
chr6 (21-74)||(27394026-27394079)
chr6 (22-79)||(34963371-34963428)
chr6 (47-103)||(22074251-22074307)
chr6 (24-84)||(25656629-25656689)
[»] chr3 (84 HSPs)
chr3 (22-217)||(20461417-20461612)
chr3 (22-217)||(2897740-2897935)
chr3 (22-217)||(7793266-7793462)
chr3 (40-217)||(15482675-15482852)
chr3 (22-217)||(327081-327277)
chr3 (49-214)||(30065970-30066135)
chr3 (49-214)||(15617398-15617563)
chr3 (49-214)||(7109722-7109887)
chr3 (49-214)||(7113657-7113822)
chr3 (49-214)||(11854757-11854922)
chr3 (49-214)||(22336743-22336908)
chr3 (49-214)||(27409564-27409729)
chr3 (49-214)||(28949748-28949913)
chr3 (49-214)||(55022891-55023056)
chr3 (49-214)||(11070092-11070257)
chr3 (49-214)||(11165449-11165614)
chr3 (49-214)||(22321688-22321853)
chr3 (49-214)||(14499349-14499514)
chr3 (40-217)||(31097471-31097649)
chr3 (40-213)||(15850006-15850176)
chr3 (22-161)||(14668554-14668700)
chr3 (48-189)||(19725857-19726004)
chr3 (106-210)||(11300435-11300539)
chr3 (22-187)||(14665398-14665570)
chr3 (40-204)||(15464878-15465040)
chr3 (25-213)||(18383837-18384032)
chr3 (40-204)||(5223077-5223239)
chr3 (40-148)||(8489459-8489564)
chr3 (25-215)||(322592-322789)
chr3 (40-214)||(16797974-16798147)
chr3 (25-215)||(11862793-11862991)
chr3 (25-215)||(12037871-12038068)
chr3 (40-204)||(12339479-12339641)
chr3 (25-214)||(11851581-11851778)
chr3 (25-101)||(12172796-12172872)
chr3 (25-180)||(12496257-12496420)
chr3 (40-214)||(16808801-16808974)
chr3 (25-180)||(11298482-11298644)
chr3 (44-178)||(11300723-11300854)
chr3 (40-148)||(11854430-11854535)
chr3 (44-217)||(17241990-17242161)
chr3 (29-101)||(23053128-23053200)
chr3 (48-95)||(3403003-3403050)
chr3 (47-101)||(1982851-1982905)
chr3 (40-161)||(16750567-16750682)
chr3 (48-95)||(3389983-3390030)
chr3 (40-99)||(4589228-4589287)
chr3 (40-99)||(19775360-19775419)
chr3 (52-158)||(38814409-38814513)
chr3 (23-101)||(46822267-46822345)
chr3 (48-101)||(12511084-12511137)
chr3 (49-161)||(4111228-4111334)
chr3 (49-101)||(11557425-11557477)
chr3 (25-101)||(15878092-15878168)
chr3 (49-161)||(15964993-15965099)
chr3 (49-161)||(15968917-15969023)
chr3 (49-161)||(15972841-15972947)
chr3 (49-161)||(19775789-19775895)
chr3 (25-101)||(23077518-23077594)
chr3 (52-158)||(3833699-3833803)
chr3 (48-95)||(11595186-11595233)
chr3 (25-84)||(14878574-14878633)
chr3 (40-99)||(16696798-16696857)
chr3 (25-101)||(856140-856216)
chr3 (49-161)||(4107376-4107482)
chr3 (25-73)||(26196500-26196548)
chr3 (49-161)||(37439615-37439721)
chr3 (52-99)||(15941938-15941985)
chr3 (48-103)||(30029867-30029922)
chr3 (48-95)||(42325964-42326011)
chr3 (25-103)||(23408428-23408506)
chr3 (52-151)||(1598464-1598560)
chr3 (48-101)||(15051531-15051584)
chr3 (48-101)||(15060307-15060360)
chr3 (48-101)||(16909765-16909818)
chr3 (48-84)||(17525216-17525252)
chr3 (111-214)||(1982730-1982833)
chr3 (24-79)||(16454388-16454443)
chr3 (21-84)||(23083419-23083482)
chr3 (119-204)||(4589039-4589125)
chr3 (111-204)||(19775515-19775608)
chr3 (48-101)||(16369423-16369476)
chr3 (152-215)||(15060428-15060492)
chr3 (24-84)||(24153266-24153326)
[»] chr2 (47 HSPs)
chr2 (22-217)||(24735397-24735592)
chr2 (49-214)||(10101565-10101730)
chr2 (49-214)||(24649378-24649543)
chr2 (49-214)||(12901432-12901597)
chr2 (49-214)||(27379353-27379518)
chr2 (49-214)||(27383399-27383564)
chr2 (49-214)||(27601817-27601982)
chr2 (49-214)||(24628399-24628564)
chr2 (111-217)||(19688673-19688779)
chr2 (49-214)||(41530930-41531089)
chr2 (40-161)||(31344890-31345008)
chr2 (25-189)||(22811856-22812028)
chr2 (136-214)||(15477711-15477789)
chr2 (25-180)||(25963670-25963832)
chr2 (25-161)||(21916072-21916215)
chr2 (44-217)||(22461106-22461277)
chr2 (48-180)||(25961488-25961628)
chr2 (40-158)||(41666962-41667078)
chr2 (47-101)||(37524697-37524751)
chr2 (25-101)||(22799167-22799243)
chr2 (25-101)||(24716569-24716645)
chr2 (47-95)||(24869902-24869950)
chr2 (52-150)||(19928487-19928583)
chr2 (47-180)||(21318590-21318731)
chr2 (47-180)||(21327521-21327662)
chr2 (47-101)||(24174822-24174876)
chr2 (25-95)||(24673569-24673639)
chr2 (25-101)||(23019747-23019823)
chr2 (49-161)||(30344970-30345076)
chr2 (52-158)||(18855438-18855541)
chr2 (48-103)||(25616212-25616267)
chr2 (47-101)||(24655379-24655433)
chr2 (40-98)||(27263285-27263343)
chr2 (40-155)||(60829-60941)
chr2 (49-161)||(1283410-1283516)
chr2 (152-215)||(24673713-24673777)
chr2 (25-101)||(40622251-40622327)
chr2 (28-95)||(24680191-24680258)
chr2 (48-95)||(40428486-40428533)
chr2 (25-102)||(22741004-22741081)
chr2 (25-82)||(45678189-45678246)
chr2 (40-158)||(23187088-23187204)
chr2 (40-158)||(23598351-23598467)
chr2 (48-102)||(23038054-23038108)
chr2 (25-102)||(22758759-22758836)
chr2 (24-84)||(22105412-22105472)
chr2 (21-85)||(23040246-23040310)
[»] chr1 (47 HSPs)
chr1 (22-214)||(24783020-24783212)
chr1 (42-217)||(16080361-16080536)
chr1 (40-217)||(36819225-36819403)
chr1 (49-214)||(1010744-1010909)
chr1 (49-214)||(20228729-20228894)
chr1 (49-214)||(16375378-16375543)
chr1 (49-214)||(21407376-21407541)
chr1 (49-214)||(52639562-52639727)
chr1 (43-217)||(19211883-19212056)
chr1 (25-217)||(18182037-18182237)
chr1 (49-217)||(23819216-23819383)
chr1 (25-215)||(22449184-22449382)
chr1 (40-204)||(33797295-33797457)
chr1 (22-85)||(21313122-21313185)
chr1 (25-215)||(3472843-3473039)
chr1 (43-155)||(20138099-20138209)
chr1 (53-158)||(18882393-18882496)
chr1 (44-217)||(12646888-12647059)
chr1 (25-101)||(17678626-17678702)
chr1 (47-101)||(3705105-3705159)
chr1 (25-103)||(21788081-21788159)
chr1 (54-158)||(46975494-46975596)
chr1 (49-161)||(1925108-1925214)
chr1 (49-161)||(20924122-20924228)
chr1 (48-95)||(18394012-18394059)
chr1 (49-100)||(33050067-33050118)
chr1 (48-95)||(45310415-45310462)
chr1 (47-180)||(8761587-8761728)
chr1 (40-157)||(20229208-20229323)
chr1 (25-95)||(21022631-21022701)
chr1 (25-82)||(6151848-6151905)
chr1 (22-103)||(22468735-22468816)
chr1 (25-82)||(22831446-22831503)
chr1 (40-161)||(39244120-39244235)
chr1 (40-161)||(39247675-39247790)
chr1 (40-161)||(41388220-41388335)
chr1 (22-101)||(20135188-20135267)
chr1 (48-95)||(45489790-45489837)
chr1 (25-84)||(20091534-20091593)
chr1 (25-84)||(42865271-42865330)
chr1 (119-204)||(20229075-20229161)
chr1 (48-102)||(21714569-21714623)
chr1 (175-217)||(33797680-33797722)
chr1 (21-74)||(13212974-13213027)
chr1 (152-215)||(21022775-21022839)
chr1 (18-74)||(21342090-21342146)
chr1 (48-84)||(27250787-27250823)
[»] chr4 (52 HSPs)
chr4 (22-217)||(36133879-36134074)
chr4 (49-214)||(9556551-9556716)
chr4 (49-214)||(17810293-17810458)
chr4 (49-214)||(4561254-4561419)
chr4 (49-214)||(14757342-14757507)
chr4 (49-214)||(5756858-5757023)
chr4 (49-214)||(27534047-27534212)
chr4 (40-187)||(22634369-22634516)
chr4 (49-214)||(33742399-33742563)
chr4 (43-217)||(1951678-1951851)
chr4 (43-217)||(18222295-18222468)
chr4 (25-215)||(16487996-16488194)
chr4 (43-217)||(17152404-17152576)
chr4 (43-217)||(18228770-18228943)
chr4 (40-204)||(43256343-43256505)
chr4 (22-187)||(20157407-20157579)
chr4 (40-204)||(18236904-18237067)
chr4 (25-187)||(13812966-13813135)
chr4 (52-158)||(26243642-26243746)
chr4 (25-180)||(16356906-16357068)
chr4 (40-150)||(3412811-3412919)
chr4 (40-158)||(16243377-16243493)
chr4 (25-101)||(12570014-12570090)
chr4 (25-103)||(16348702-16348780)
chr4 (40-156)||(28569423-28569537)
chr4 (40-158)||(2014791-2014907)
chr4 (40-99)||(14708668-14708727)
chr4 (52-158)||(19757578-19757682)
chr4 (52-158)||(19782124-19782228)
chr4 (52-217)||(23139296-23139459)
chr4 (49-161)||(10712874-10712980)
chr4 (49-161)||(10926644-10926750)
chr4 (47-189)||(5338926-5339076)
chr4 (40-99)||(15224807-15224866)
chr4 (48-95)||(25555503-25555550)
chr4 (25-103)||(15093775-15093853)
chr4 (47-101)||(15353348-15353402)
chr4 (52-151)||(45938173-45938269)
chr4 (48-95)||(11250608-11250655)
chr4 (40-99)||(42997484-42997543)
chr4 (40-98)||(18602766-18602824)
chr4 (40-96)||(18609340-18609396)
chr4 (48-84)||(23843501-23843537)
chr4 (21-84)||(6899891-6899954)
chr4 (25-84)||(15121858-15121917)
chr4 (24-74)||(8574935-8574985)
chr4 (53-99)||(9530460-9530506)
chr4 (24-82)||(18239523-18239581)
chr4 (175-217)||(43256078-43256120)
chr4 (21-74)||(39706356-39706409)
chr4 (25-84)||(13569502-13569561)
chr4 (18-74)||(19242693-19242749)
[»] scaffold0044 (3 HSPs)
scaffold0044 (40-217)||(12916-13093)
scaffold0044 (40-217)||(19200-19377)
scaffold0044 (40-155)||(62273-62386)
[»] scaffold0228 (1 HSPs)
scaffold0228 (40-217)||(18549-18726)
[»] scaffold0029 (6 HSPs)
scaffold0029 (49-214)||(65448-65613)
scaffold0029 (49-214)||(61532-61697)
scaffold0029 (49-214)||(80736-80898)
scaffold0029 (25-101)||(12763-12839)
scaffold0029 (40-99)||(80307-80366)
scaffold0029 (111-180)||(80462-80530)
[»] chr5 (61 HSPs)
chr5 (22-189)||(17410434-17410601)
chr5 (40-217)||(23535506-23535681)
chr5 (49-214)||(20295868-20296033)
chr5 (49-214)||(15236700-15236865)
chr5 (49-214)||(19472640-19472805)
chr5 (25-215)||(21366584-21366781)
chr5 (43-217)||(42805436-42805609)
chr5 (40-204)||(20911101-20911263)
chr5 (22-187)||(24767493-24767665)
chr5 (43-217)||(18774219-18774393)
chr5 (44-217)||(26742663-26742835)
chr5 (40-204)||(18355970-18356132)
chr5 (43-158)||(18784062-18784175)
chr5 (44-217)||(20232568-20232739)
chr5 (44-217)||(24532965-24533136)
chr5 (44-217)||(26666048-26666219)
chr5 (44-217)||(26937645-26937816)
chr5 (40-158)||(21885166-21885282)
chr5 (49-114)||(40723607-40723672)
chr5 (25-101)||(1859017-1859093)
chr5 (47-95)||(26680604-26680652)
chr5 (47-95)||(26952211-26952259)
chr5 (30-101)||(123346-123417)
chr5 (52-158)||(16674177-16674281)
chr5 (52-158)||(17718416-17718520)
chr5 (44-99)||(21340800-21340855)
chr5 (52-158)||(33409253-33409357)
chr5 (25-95)||(20805552-20805622)
chr5 (48-101)||(23451371-23451424)
chr5 (49-161)||(10753385-10753491)
chr5 (23-103)||(17517240-17517320)
chr5 (25-101)||(20766974-20767050)
chr5 (25-101)||(23458592-23458668)
chr5 (25-101)||(23462853-23462929)
chr5 (25-101)||(23572084-23572160)
chr5 (47-95)||(31342169-31342217)
chr5 (40-99)||(10752956-10753015)
chr5 (48-95)||(12028612-12028659)
chr5 (48-95)||(17919198-17919245)
chr5 (40-98)||(4036232-4036290)
chr5 (47-101)||(24221899-24221953)
chr5 (40-98)||(25229441-25229499)
chr5 (40-98)||(25293597-25293655)
chr5 (25-101)||(23512098-23512174)
chr5 (51-99)||(26172488-26172536)
chr5 (25-84)||(21873254-21873313)
chr5 (175-216)||(20910718-20910759)
chr5 (48-101)||(23201383-23201436)
chr5 (25-82)||(23501415-23501472)
chr5 (25-84)||(14079149-14079208)
chr5 (24-79)||(2154721-2154776)
chr5 (25-84)||(22032323-22032382)
chr5 (48-95)||(22757148-22757195)
chr5 (24-79)||(31061068-31061123)
chr5 (24-79)||(42245472-42245527)
chr5 (111-204)||(10753111-10753204)
chr5 (175-217)||(18356474-18356516)
chr5 (48-102)||(26704098-26704152)
chr5 (48-102)||(26973831-26973885)
chr5 (21-74)||(21329565-21329618)
chr5 (25-101)||(18770042-18770118)
[»] scaffold0525 (1 HSPs)
scaffold0525 (49-214)||(3795-3960)
[»] scaffold0001 (3 HSPs)
scaffold0001 (40-217)||(173304-173479)
scaffold0001 (25-101)||(422572-422648)
scaffold0001 (24-74)||(85692-85742)
[»] scaffold0372 (1 HSPs)
scaffold0372 (49-214)||(5021-5186)
[»] chr8 (53 HSPs)
chr8 (49-214)||(43251834-43251999)
chr8 (49-214)||(19278203-19278368)
chr8 (49-214)||(21972505-21972670)
chr8 (49-214)||(21976590-21976755)
chr8 (43-217)||(16231392-16231565)
chr8 (81-214)||(22111904-22112037)
chr8 (43-217)||(22044900-22045073)
chr8 (25-215)||(20465957-20466157)
chr8 (25-189)||(30643237-30643408)
chr8 (40-204)||(14398039-14398201)
chr8 (40-141)||(21387086-21387184)
chr8 (47-180)||(15602971-15603111)
chr8 (47-180)||(15611423-15611563)
chr8 (105-217)||(18619554-18619667)
chr8 (40-145)||(21383666-21383768)
chr8 (119-217)||(22028647-22028746)
chr8 (25-180)||(17926660-17926822)
chr8 (43-217)||(23834188-23834362)
chr8 (25-101)||(24755714-24755790)
chr8 (52-158)||(15531914-15532018)
chr8 (48-180)||(16410208-16410347)
chr8 (40-217)||(30308671-30308846)
chr8 (23-103)||(18678141-18678221)
chr8 (52-158)||(15538473-15538577)
chr8 (48-103)||(32121759-32121814)
chr8 (40-158)||(32605223-32605339)
chr8 (47-100)||(22010716-22010769)
chr8 (52-158)||(23846992-23847096)
chr8 (48-101)||(39094965-39095018)
chr8 (25-101)||(377271-377347)
chr8 (25-101)||(16861365-16861441)
chr8 (40-100)||(17055412-17055472)
chr8 (49-161)||(18862624-18862730)
chr8 (49-161)||(21827993-21828099)
chr8 (48-95)||(20856472-20856518)
chr8 (40-99)||(32598691-32598750)
chr8 (25-95)||(23776882-23776952)
chr8 (25-101)||(16184720-16184796)
chr8 (25-101)||(17353984-17354060)
chr8 (52-151)||(17828567-17828663)
chr8 (25-101)||(21162099-21162175)
chr8 (25-101)||(21168772-21168848)
chr8 (49-161)||(21410971-21411077)
chr8 (49-161)||(21805463-21805569)
chr8 (48-101)||(19259632-19259685)
chr8 (111-215)||(20856343-20856448)
chr8 (22-101)||(23648554-23648633)
chr8 (52-98)||(24445541-24445587)
chr8 (21-74)||(6520368-6520421)
chr8 (18-79)||(6759255-6759316)
chr8 (51-84)||(19983119-19983152)
chr8 (21-74)||(38855319-38855372)
chr8 (152-215)||(19259500-19259564)
[»] scaffold0028 (1 HSPs)
scaffold0028 (49-214)||(58639-58804)
[»] scaffold0009 (1 HSPs)
scaffold0009 (40-217)||(228290-228466)
[»] scaffold0013 (1 HSPs)
scaffold0013 (40-214)||(2593-2766)
[»] scaffold0349 (1 HSPs)
scaffold0349 (49-214)||(12443-12608)
[»] scaffold0109 (3 HSPs)
scaffold0109 (49-214)||(35863-36027)
scaffold0109 (40-217)||(6957-7133)
scaffold0109 (40-99)||(11336-11395)
[»] scaffold0177 (1 HSPs)
scaffold0177 (53-217)||(13404-13568)
[»] scaffold0120 (1 HSPs)
scaffold0120 (40-217)||(19934-20110)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-217)||(3447-3620)
[»] scaffold0425 (1 HSPs)
scaffold0425 (25-215)||(159-358)
[»] scaffold0676 (2 HSPs)
scaffold0676 (25-217)||(4430-4630)
scaffold0676 (49-161)||(471-578)
[»] scaffold0405 (1 HSPs)
scaffold0405 (40-217)||(9582-9759)
[»] scaffold0761 (1 HSPs)
scaffold0761 (25-215)||(6227-6425)
[»] scaffold0334 (1 HSPs)
scaffold0334 (43-217)||(18277-18450)
[»] scaffold0216 (1 HSPs)
scaffold0216 (25-189)||(17056-17228)
[»] scaffold1296 (1 HSPs)
scaffold1296 (25-215)||(393-591)
[»] scaffold0004 (2 HSPs)
scaffold0004 (129-217)||(10501-10589)
scaffold0004 (25-102)||(69794-69871)
[»] scaffold0476 (2 HSPs)
scaffold0476 (47-212)||(5608-5781)
scaffold0476 (47-212)||(6803-6976)
[»] scaffold0393 (1 HSPs)
scaffold0393 (25-215)||(1494-1691)
[»] scaffold0124 (1 HSPs)
scaffold0124 (25-215)||(42627-42820)
[»] scaffold0012 (2 HSPs)
scaffold0012 (43-217)||(24885-25059)
scaffold0012 (49-161)||(189356-189462)
[»] scaffold0346 (1 HSPs)
scaffold0346 (25-215)||(15087-15284)
[»] scaffold0166 (1 HSPs)
scaffold0166 (22-187)||(9990-10162)
[»] scaffold0035 (1 HSPs)
scaffold0035 (48-215)||(46645-46820)
[»] scaffold0080 (1 HSPs)
scaffold0080 (25-215)||(18574-18774)
[»] scaffold0104 (2 HSPs)
scaffold0104 (25-180)||(9513-9674)
scaffold0104 (25-180)||(1830-1992)
[»] scaffold0299 (1 HSPs)
scaffold0299 (40-204)||(6693-6855)
[»] scaffold0051 (1 HSPs)
scaffold0051 (40-204)||(30897-31059)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-177)||(73725-73883)
[»] scaffold0268 (1 HSPs)
scaffold0268 (128-214)||(928-1014)
[»] scaffold1461 (1 HSPs)
scaffold1461 (101-217)||(1-118)
[»] scaffold1052 (1 HSPs)
scaffold1052 (33-187)||(2913-3074)
[»] scaffold0327 (1 HSPs)
scaffold0327 (25-101)||(289-365)
[»] scaffold0293 (1 HSPs)
scaffold0293 (40-204)||(20395-20557)
[»] scaffold0016 (1 HSPs)
scaffold0016 (40-204)||(207768-207942)
[»] scaffold0010 (1 HSPs)
scaffold0010 (43-217)||(23232-23405)
[»] scaffold0546 (2 HSPs)
scaffold0546 (40-217)||(6174-6350)
scaffold0546 (40-99)||(1912-1971)
[»] scaffold0367 (1 HSPs)
scaffold0367 (25-161)||(897-1040)
[»] scaffold0070 (2 HSPs)
scaffold0070 (40-158)||(9916-10032)
scaffold0070 (48-84)||(4551-4587)
[»] scaffold0615 (1 HSPs)
scaffold0615 (48-101)||(2125-2178)
[»] scaffold1326 (1 HSPs)
scaffold1326 (47-215)||(1408-1584)
[»] scaffold0056 (1 HSPs)
scaffold0056 (25-101)||(14127-14203)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-101)||(38520-38596)
[»] scaffold0284 (1 HSPs)
scaffold0284 (40-158)||(18367-18483)
[»] scaffold0130 (1 HSPs)
scaffold0130 (40-158)||(5977-6093)
[»] scaffold0093 (1 HSPs)
scaffold0093 (25-104)||(4842-4921)
[»] scaffold0043 (2 HSPs)
scaffold0043 (40-158)||(77148-77264)
scaffold0043 (25-84)||(18236-18295)
[»] scaffold0042 (2 HSPs)
scaffold0042 (52-158)||(63878-63982)
scaffold0042 (25-101)||(34960-35036)
[»] scaffold0079 (1 HSPs)
scaffold0079 (25-103)||(44081-44159)
[»] scaffold0037 (2 HSPs)
scaffold0037 (106-214)||(21488-21596)
scaffold0037 (40-99)||(80810-80869)
[»] scaffold0671 (1 HSPs)
scaffold0671 (25-101)||(6095-6171)
[»] scaffold0550 (1 HSPs)
scaffold0550 (25-101)||(7471-7547)
[»] scaffold0003 (4 HSPs)
scaffold0003 (42-148)||(71083-71180)
scaffold0003 (25-101)||(414091-414167)
scaffold0003 (52-99)||(139736-139783)
scaffold0003 (175-217)||(71460-71502)
[»] scaffold0585 (1 HSPs)
scaffold0585 (40-99)||(9347-9406)
[»] scaffold0158 (2 HSPs)
scaffold0158 (25-100)||(2832-2907)
scaffold0158 (25-100)||(6498-6573)
[»] scaffold0008 (2 HSPs)
scaffold0008 (40-158)||(1889-2005)
scaffold0008 (25-101)||(30783-30859)
[»] scaffold0171 (1 HSPs)
scaffold0171 (48-101)||(35552-35605)
[»] scaffold0017 (3 HSPs)
scaffold0017 (48-101)||(19773-19826)
scaffold0017 (48-101)||(15251-15304)
scaffold0017 (48-84)||(193034-193070)
[»] scaffold0280 (1 HSPs)
scaffold0280 (108-215)||(19210-19317)
[»] scaffold0229 (1 HSPs)
scaffold0229 (49-161)||(11480-11586)
[»] scaffold0210 (2 HSPs)
scaffold0210 (25-101)||(21844-21920)
scaffold0210 (25-101)||(29736-29812)
[»] scaffold0141 (1 HSPs)
scaffold0141 (49-161)||(14066-14172)
[»] scaffold0111 (2 HSPs)
scaffold0111 (40-143)||(8512-8613)
scaffold0111 (40-143)||(15656-15757)
[»] scaffold0081 (3 HSPs)
scaffold0081 (25-101)||(14664-14740)
scaffold0081 (25-101)||(23679-23755)
scaffold0081 (25-101)||(39103-39179)
[»] scaffold0637 (1 HSPs)
scaffold0637 (48-95)||(8583-8630)
[»] scaffold0412 (1 HSPs)
scaffold0412 (48-180)||(6369-6508)
[»] scaffold0371 (1 HSPs)
scaffold0371 (40-99)||(15350-15409)
[»] scaffold0034 (1 HSPs)
scaffold0034 (40-158)||(16640-16756)
[»] scaffold1552 (1 HSPs)
scaffold1552 (40-98)||(381-439)
[»] scaffold0439 (2 HSPs)
scaffold0439 (47-101)||(2477-2531)
scaffold0439 (47-101)||(10337-10391)
[»] scaffold0342 (1 HSPs)
scaffold0342 (48-101)||(7311-7364)
[»] scaffold0096 (1 HSPs)
scaffold0096 (48-101)||(16389-16442)
[»] scaffold0311 (1 HSPs)
scaffold0311 (25-101)||(7128-7204)
[»] scaffold1220 (1 HSPs)
scaffold1220 (50-101)||(1817-1868)
[»] scaffold0410 (1 HSPs)
scaffold0410 (48-95)||(2191-2238)
[»] scaffold0297 (2 HSPs)
scaffold0297 (25-84)||(15737-15796)
scaffold0297 (25-84)||(10580-10639)
[»] scaffold0193 (1 HSPs)
scaffold0193 (52-158)||(9445-9549)
[»] scaffold0184 (1 HSPs)
scaffold0184 (48-95)||(4273-4320)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-82)||(280950-281007)
[»] scaffold1124 (1 HSPs)
scaffold1124 (25-101)||(1881-1957)
[»] scaffold0215 (1 HSPs)
scaffold0215 (25-101)||(26828-26904)
[»] scaffold0101 (1 HSPs)
scaffold0101 (25-101)||(9004-9080)
[»] scaffold0132 (1 HSPs)
scaffold0132 (52-99)||(36331-36378)
[»] scaffold0107 (1 HSPs)
scaffold0107 (175-217)||(15334-15376)
[»] scaffold0102 (1 HSPs)
scaffold0102 (52-102)||(48500-48550)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-84)||(29091-29153)
[»] scaffold0574 (1 HSPs)
scaffold0574 (48-81)||(7878-7911)
[»] scaffold0530 (1 HSPs)
scaffold0530 (21-74)||(1102-1155)
[»] scaffold0333 (2 HSPs)
scaffold0333 (21-74)||(6611-6664)
scaffold0333 (21-74)||(13991-14044)
[»] scaffold0243 (1 HSPs)
scaffold0243 (21-74)||(6191-6244)
[»] scaffold0139 (1 HSPs)
scaffold0139 (25-102)||(19980-20057)
[»] scaffold0020 (2 HSPs)
scaffold0020 (21-74)||(15845-15898)
scaffold0020 (48-84)||(178921-178957)
[»] scaffold0819 (1 HSPs)
scaffold0819 (24-72)||(4214-4262)
[»] scaffold0185 (1 HSPs)
scaffold0185 (47-103)||(33569-33625)
[»] scaffold0145 (1 HSPs)
scaffold0145 (19-79)||(9744-9804)
[»] scaffold0114 (1 HSPs)
scaffold0114 (25-101)||(7295-7371)
[»] scaffold0106 (1 HSPs)
scaffold0106 (48-84)||(15296-15332)


Alignment Details
Target: scaffold0036 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 66527 - 66332
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  66527 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 66428  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  66427 caacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 66332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 168; Significance: 3e-90; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 53559 - 53754
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  53559 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 53658  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53659 caacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 53754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 36171 - 36065
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  36171 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 36078  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  36077 tttcaagtaatgc 36065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 65891 - 65838
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  65891 actcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 65838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 11312642 - 11312837
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  11312642 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 11312741  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11312742 caacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 11312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 13635563 - 13635386
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  13635563 cttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttgatcat 13635464  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13635463 tcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 13635386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 38 - 217
Target Start/End: Original strand, 12318137 - 12318316
Alignment:
Q  38 atcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatc 137  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  12318137 atcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttaatc 12318236  T
Q  138 attcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  12318237 attcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttaacatttcataatagcttcacagtt 12318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 38 - 217
Target Start/End: Original strand, 15580701 - 15580880
Alignment:
Q  38 atcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatc 137  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||    
T  15580701 atcttattcagactcatgcaacttagttaaataacgatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttttttatc 15580800  T
Q  138 attcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15580801 attcaataataattcaagtaatgcaatcaattaataaatcacattataatcacttagcatttcataatagcttcacagtt 15580880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 15605365 - 15605189
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaa-ttcattttcaacaacttcttgatcatt 140  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15605365 tattcagactcatgcattttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaaattcattttcaacaacttcttgatcatt 15605266  T
Q  141 caataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  15605265 caataataattcaagtaatgcaatcaatcaataaatcacattataatcacttaacatttcataatagcttcacagtt 15605189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 16583268 - 16583444
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  16583268 cttattcagactcatgcaacgtagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttctcgatcat 16583367  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  16583368 tcaacaataattcaagtaatgcaatcaatc-ataaatcacattataatcacttagcatttcataatagcttcacagtt 16583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 39722287 - 39722452
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  39722287 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaactcattttcaacaacttcctgatcattcaataata 39722386  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| || ||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  39722387 attcaagtaatgcaattaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 39722452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 70850 - 70685
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||| | || |||||||||||    
T  70850 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaattattcaataata 70751  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  70750 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 70685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 74959 - 74794
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||| | || |||||||||||    
T  74959 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaattattcaataata 74860  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  74859 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 74794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 12714885 - 12715050
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  12714885 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 12714984  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12714985 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 12715050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 12718689 - 12718854
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  12718689 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 12718788  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12718789 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 12718854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 16114262 - 16114427
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  16114262 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattatcaattcattttcaacaacttcctgatcattcaataata 16114361  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  16114362 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 16114427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 16117415 - 16117580
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  16117415 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattatcaattcattttcaacaacttcctgatcattcaataata 16117514  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  16117515 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 16117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 16907286 - 16907121
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  16907286 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 16907187  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  16907186 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 16907121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 18283387 - 18283552
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  18283387 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 18283486  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  18283487 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 18283552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 26292416 - 26292581
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  26292416 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaatatcaattcattttcaacaacttccttatcattcaataata 26292515  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || ||| |||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  26292516 attcaattaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 26292581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 18279424 - 18279589
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||| || |||| ||||||||||||||||||||| ||||||||||||||||    
T  18279424 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacaacttaataccaattcattttcaacaacttcctgatcattcaataata 18279523  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  18279524 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 18279589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 33128 - 33293
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||| ||||||||||||||| |||||||||| || || |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  33128 actcatgcaactgagttaaataacaataacagcataatcggaacatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 33227  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  33228 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 33293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 12704744 - 12704579
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  12704744 actcatgtaacttagttaaataacaatagcagcataatcagattatatcagcagcttaataccaattcattttcaacaacttcctgatcattcaataata 12704645  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || ||||||||||  ||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12704644 attcaagtaatgcattcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 12704579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 12723600 - 12723765
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | |||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||    
T  12723600 actcatgtaacttagttaaataacaatatcagcataatcagattatatcaacagcttaataccaatttattttcaacaacttcctgatcattcaataata 12723699  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12723700 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 12723765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 9593361 - 9593534
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||||||||||||| ||||||||||||||    
T  9593361 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaatttcttgatcattca 9593458  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||||| ||||||| |||| | ||  |||| |||||||  ||||||||| ||||||||||||    
T  9593459 ataataattcaagtaaatgcaatcaatccataatttactttatattcacttaaaatttcataaaagcttcacagtt 9593534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 19148 - 18975
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||  |||| |||| ||||||||||||||||| | ||||||||||||    
T  19148 attcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaattccttgatcattca 19051  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||| | ||||||| |||| ||||  |||| ||||||| ||| |||||| ||||||||||||    
T  19050 ataataattcaagtaaatacaatcaatccataattcactttatattcacttaacatatcataaaagcttcacagtt 18975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 217
Target Start/End: Original strand, 11987225 - 11987400
Alignment:
Q  41 ttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcatt 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||| ||||||||||||  ||||||||||||    
T  11987225 ttattcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacagtttcttgatcatt 11987322  T
Q  141 caataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||  ||||| ||||| ||||||| |||| ||||    || ||||||| |||||||||| ||||||||||||    
T  11987323 caataataaatcaagtaaatgcaatcaatccataattcacttattattcacttaacatttcataaaagcttcacagtt 11987400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 13918872 - 13918710
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  13918872 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 13918776  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| |||||||||||| || | |||||||| |||||||    
T  13918775 tcaataatatttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataa 13918710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 14429883 - 14430080
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------ctgaatatcaattca 117  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||       |   |||||||||||    
T  14429883 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagccgcataatcagatcacaacaacagtatacttcatcatatcaattca 14429982  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
     ||||| |||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| |||||||| |||| || ||||||  ||||||||||    
T  14429983 -tttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacag 14430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 2832561 - 2832389
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac-----agct---gaatatcaa 113  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||     | ||    ||||||||    
T  2832561 catcatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcccatcaacaatataactttataatatcaa 2832462  T
Q  114 ttcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    |||| |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  2832461 ttca-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 2832389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 1859178 - 1859016
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||  |||| |||| |||||| ||||||||||| ||||||||||    
T  1859178 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacaaca--agcttaataacaattc-ttttcaacaacatcttgatcat 1859082  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| |||||||||||| || | |||||||| |||||||    
T  1859081 tcaataatatttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataa 1859016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 12321858 - 12321660
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||| ||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||        |  |||||||||||    
T  12321858 catcttcttaatcatcttgtatagactcatgcaacgtagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatcaattc 12321759  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    | |||||||||| |||||||||||| |||||| | |||||||||| || ||||| ||||||||| ||||||| ||||| || ||||||| || |||||||    
T  12321758 a-tttcaacaacatcttgatcattccataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacagttcataacagtttcacag 12321660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 7519447 - 7519332
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| |||||||||||||    
T  7519447 attcagactcatccaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcattca 7519351  T
Q  143 ataataatccaagtaatgc 161  Q
    |||||| | ||||||||||    
T  7519350 ataatatttcaagtaatgc 7519332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 9751871 - 9751703
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------ctgaatatcaattca 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       |  ||||||||||||    
T  9751871 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagtataattcataatatcaattca 9751772  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
     || ||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  9751771 -ttccaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 9751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 16457446 - 16457334
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||  |||| |||| ||| ||||||||||||| |||||||||||||||    
T  16457446 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacaatttcttgatcattcaa 16457349  T
Q  144 taataatccaagtaa 158  Q
    ||||||| |||||||    
T  16457348 taataattcaagtaa 16457334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 25927595 - 25927433
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  | || ||||  |||||| |||||||||| ||||||||||    
T  25927595 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--aacttaataaaaattca-tttcaacaacatcttgatcat 25927499  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  25927498 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 25927433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 8917439 - 8917615
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||| ||||||||| ||| |||||||| |||||||||   | | |||| ||| |||||  |||||| |||||||||||    
T  8917439 cttattcatactcatgcaacttagtttaataacaattgcaacataatcaaatcacatca--ggtttaataacaaatcattcacaacaatttcttgatcat 8917536  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| |||||| ||||| ||||| ||||||| |||| ||||   ||||||||||| || ||| ||| ||||||| ||||    
T  8917537 tcaacaataattcaagtaaatgcaatcaatccataattcacttcataatcacttaacaattcttaaaagcttcagagtt 8917615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 2530484 - 2530378
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatca-catcaacagctgaatatcaattcattttcaacaacttcttgatca 138  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||  ||||  |||| |||| ||||||||||||| ||| ||||||||||    
T  2530484 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcataatca--agcttaataacaattcattttcagcaatttcttgatca 2530387  T
Q  139 ttcaataat 147  Q
    ||| |||||    
T  2530386 ttccataat 2530378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 2760153 - 2760294
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattcattttcaacaacttcttgatca 138  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||         |  ||||||||||||||||||||||| || ||||||    
T  2760153 agactcatgcaacttagttaaataacgaaagcagcataatcagatcacaacaacattataacttcataatatcaattcattttcaacaacatcatgatca 2760252  T
Q  139 ttcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    ||||||||||   ||||||||||  | ||||| |||||||||    
T  2760253 ttcaataatatctcaagtaatgcatttaatcattaaatcaca 2760294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 9644385 - 9644497
Alignment:
Q  106 aatatcaattcattttcaacaacttcttgatcattcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataa 204  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||| |||| | ||  |||| |||||||  |||||||||    
T  9644385 aataacaattcattttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataatttactttatattcacttaaaatttcataa 9644484  T
Q  205 tagcttcacagtt 217  Q
     ||||||||||||    
T  9644485 aagcttcacagtt 9644497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 3271823 - 3272020
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc---------tgaatatcaatt 115  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||         | | ||||||||    
T  3271823 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacagcataacttcataattatcaatt 3271922  T
Q  116 cattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcaca 214  Q
    || |||| ||||| ||||||| |||||||||| || |||||||||| || ||||| |||||||||  ||||||| ||||  | ||||||| |||||||||    
T  3271923 ca-tttctacaacatcttgattattcaataat-attcaagtaatgcaattaatcagtaaatcacatcataatcagcttaatagttcataacagcttcaca 3272020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 13149167 - 13149283
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | | |||| ||| ||||| ||||||| |||||||||||    
T  13149167 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgatcat 13149264  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  13149265 tcaacaataattcaagtaa 13149283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 14152105 - 14152048
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  14152105 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagca 14152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 39268016 - 39267847
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    ||||||||| || ||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||         |  |||||||||||    
T  39268016 catcatcttgatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagattaccacaacattaaaacttcataatatcaattc 39267917  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    | |||||||||| |||||||||||||||| || | ||||||||||  | ||||| ||| ||||| ||||||    
T  39267916 a-tttcaacaacatcttgatcattcaatactatttcaagtaatgcatttaatcattaattcacattataat 39267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 18425450 - 18425565
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| ||||||||||    
T  18425450 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcat 18425543  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | ||||||||||    
T  18425544 tcaataatatttcaagtaatgc 18425565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 13461773 - 13461889
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| |||||||||| |||||| ||| ||||| |||||||||||| |||||||||   | | |||| ||| |||||  |||||| |||||||||||    
T  13461773 cttattcatactcatgcaaattagtttaattacaattgcagcataatcaaatcacatca--ggtttaataacaaatcattcacaacaatttcttgatcat 13461870  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  13461871 tcaacaataattcaagtaa 13461889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 16275504 - 16275563
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16275504 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 16275563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 35151618 - 35151676
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  35151618 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca 35151676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 14216927 - 14217040
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  14216927 cttattcatattcatgcaacttagttcaataacaattgcagcataatcaaatcacatca--ggttaaataacaaatcattctcaatagtttcttgatcat 14217024  T
Q  140 tcaataataatccaag 155  Q
    |||| |||||| ||||    
T  14217025 tcaacaataattcaag 14217040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 15728337 - 15728450
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  15728337 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca--ggttaaataacaaatcattctcaatagtttcttgatcat 15728434  T
Q  140 tcaataataatccaag 155  Q
    |||| |||||| ||||    
T  15728435 tcaacaataattcaag 15728450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 19649606 - 19649530
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  19649606 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcatagacagattacaacaaca 19649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 45170091 - 45169985
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  45170091 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 45169998  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  45169997 tttcaagtaatgc 45169985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 42204017 - 42204064
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42204017 gactcatgcaacttagttaaacaacaacagcagcataatcagatcaca 42204064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 9446253 - 9446199
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  9446253 agactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaaca 9446199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 16724723 - 16724665
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  16724723 cttattcatactcatgcaacttagtttaataacaattgcagcataatgaaatcacatca 16724665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 17701737 - 17701679
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  17701737 cttattcatactcatgcaacttagtttaataacaattgcagcataatgaaatcacatca 17701679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 6801229 - 6801401
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    ||||||| |||||||| ||||| ||||||||| |||||||||||| ||||  |||  |||| |||| ||| ||||| ||||||| |||||||||| | ||    
T  6801229 ttcagacccatgcaacatagtttaataacaattgcagcataatcaaatcatgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaattaa 6801325  T
Q  144 taataatccaagtaa-tgccatcaatcaataa-atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| ||||  ||||   |||||||||||  || ||||||| |||||||||||    
T  6801326 caataattcaagtaagggcaatcaatccataatttcacttcataatcacttaatatatcataatggcttcacagtt 6801401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 18556996 - 18557101
Alignment:
Q  51 tcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataat 150  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||| || ||||||    
T  18556996 tcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggttcaatagcaaatcattctcaatagtttcttgatcatttaacaataat 18557093  T
Q  151 ccaagtaa 158  Q
     |||||||    
T  18557094 tcaagtaa 18557101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 2530108 - 2530060
Alignment:
Q  169 caataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||| |||||| |||||||||||| ||||||| |||||||||||||||    
T  2530108 caatatatcacattataatcacttaacatttcacaatagcttcacagtt 2530060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17138177 - 17138101
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||  ||||| ||| |||||    
T  17138177 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 17138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 12187019 - 12187078
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||    
T  12187019 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacata 12187078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 14932851 - 14932792
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||||||    
T  14932851 catcatcttaatcaacttagactgactcatgcgacttagttaaataacaatagtagcata 14932792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15356286 - 15356227
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||||||    
T  15356286 catcatcttaatcaacttagactgactcatgcgacttagttaaataacaatagtagcata 15356227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15360400 - 15360341
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||||||    
T  15360400 catcatcttaatcaacttagactgactcatgcgacttagttaaataacaatagtagcata 15360341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20569690 - 20569643
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  20569690 gactcatgcaacttagttaaataacagcagcaacataatcatatcaca 20569643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 18430709 - 18430767
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||||||| | ||||  | |||||||||| |||||||||||||||| ||||    
T  18430709 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagca 18430767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 24054477 - 24054523
Alignment:
Q  38 atcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  24054477 atcttatactgactcatgcaacttggttaattaacaatagcagcata 24054523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 67745 - 67798
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  67745 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 67798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 28505419 - 28505366
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||| || ||||||  | |||||||||| ||||||||||||||||    
T  28505419 acatcatcatcttcatcatcttagaccgactcatgcagcttagttaaataacaa 28505366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 47831807 - 47831860
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  47831807 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 47831860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 9703263 - 9703322
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  9703263 catcatcttgatcatcttatatca-actcatgcaacatagttaaataacaataacagcata 9703322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 15211484 - 15211520
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||||||||||| |||||| |||||||||    
T  15211484 gactcatgcaacttagttaattaacaacagcagcata 15211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 18456530 - 18456470
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||| |||||| ||||    
T  18456530 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacgatagcaacata 18456470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 32216665 - 32216606
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| ||| ||||||||||| ||||||||||| ||||||||||||    
T  32216665 catcatcttgatcatcttatatca-actcatgcaacatagttaaataataatagcagcata 32216606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 38227508 - 38227544
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  38227508 gactcatgcagcttagttaaataacaatagcaacata 38227544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 3e-90; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 17804191 - 17804386
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  17804191 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 17804290  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17804291 caacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 17804386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 25767280 - 25767085
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| | || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  25767280 catcatcatttcaaatatcttattcagactcatgcaacttagttaagtaacaatagcagcataatcagatcacaccaacagcttaatatcaattcatctt 25767181  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  25767180 caacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaattacattataatcacttagcatttcataatagtttcacagtt 25767085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 22430122 - 22429947
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattc 141  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||     
T  22430122 tattcagactcatgcaacttagttaattaactatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttgatcattt 22430023  T
Q  142 aataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  22430022 aataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataataacttcacagtt 22429947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 1644726 - 1644891
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1644726 actcatgcaacttagtttaataacaatggcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 1644825  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  1644826 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 1644891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 11566883 - 11567048
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  11566883 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 11566982  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  11566983 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 11567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 14472292 - 14472456
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14472292 actcatgcaacttagttaa-taacaatagcagcataattagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 14472390  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  14472391 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 14472456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 19870611 - 19870776
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  19870611 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattatcaattcattttcaacaacttcctgatcattcaataata 19870710  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  19870711 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 19870776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 23395089 - 23395254
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  23395089 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 23395188  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  23395189 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 23395254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 8243882 - 8244047
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  8243882 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 8243981  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||| ||||    
T  8243982 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagctccaca 8244047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 18917351 - 18917186
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  18917351 actcatgcaacttagttaaataacaatagcagcataattatatcatatcaacagcccaatatcaattcattttcaacaacttcctgatcattcaataata 18917252  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||| ||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  18917251 attcaagcaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 18917186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 22862967 - 22863132
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||  | ||||||||||||||    
T  22862967 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaactttctaatcattcaataata 22863066  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  | |||||||||    
T  22863067 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatacagcttcaca 22863132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 23989941 - 23990106
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| | || ||||||||||||||||||||| ||||||||||||||||    
T  23989941 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattaccaattcattttcaacaacttcctgatcattcaataata 23990040  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  23990041 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 23990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 18955848 - 18955683
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||| |||||||| ||||||||||||||    
T  18955848 actcatgcaacttagtttaataacaatagcagcataatcggatcatatcaacaacttaatatcaattcattttcaataacttcttaatcattcaataata 18955749  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||||||||    
T  18955748 attcaagtaatgcaatcaatcaatcaatcacattataaacacttagcatttcaatatagcttcaca 18955683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 12618929 - 12618765
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  ||| |||||||||| |||||||| | ||||||||||||||||    
T  12618929 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttgataccaattcattt-caacaactccctgatcattcaataata 12618831  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| ||||||||||||||||||  |||| ||||||||||||||  |||||||||||    
T  12618830 attcaagtaatgcaatcaatcaataaatcacataataaacacttagcatttcaatatagcttcaca 12618765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 12706705 - 12706878
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||||||||| ||| ||||||||||||||    
T  12706705 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcagcaatttcttgatcattca 12706802  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    | |||||| ||||| ||||| ||||||| |||| |||   |||| ||||||| |||||||||| ||||||||||||    
T  12706803 aaaataattcaagtaaatgcaatcaatccataattcattttatattcacttaacatttcataaaagcttcacagtt 12706878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 214
Target Start/End: Original strand, 16741222 - 16741392
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    |||||||| |||||||||||||| ||||||||| | |||||||||| |||||||||  |||| |||| ||||||| | ||||||| ||||||||||||||    
T  16741222 attcagacacatgcaacttagtttaataacaattgtagcataatcaaatcacatca--agcttaataacaattcactgtcaacaatttcttgatcattca 16741319  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    |||||||| ||||| ||||| ||||||| |||| ||||  |||||||||||| |||||||||| |||||||||    
T  16741320 ataataattcaagtaaatgcaatcaatccataattcactttataatcacttaacatttcataaaagcttcaca 16741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 18907111 - 18907308
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||        |  |||||||||||    
T  18907111 catcatcttaatcatcttgtatagactcatgcagcttagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatcaattc 18907210  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat-cacttagcatttcataatagcttcaca 214  Q
    | |||||||||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| ||||||  ||||| || ||||||| |||||||||    
T  18907211 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatgaacttaacagttcataacagcttcaca 18907308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 23414658 - 23414820
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  23414658 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 23414754  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  23414755 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 23414820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 27556416 - 27556578
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  27556416 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 27556512  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  27556513 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 27556578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 27325730 - 27325582
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaa 113  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||        |  ||||||||    
T  27325730 catcatcatttcaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcatatcacatcaacagtataacttcataatatcaa 27325631  T
Q  114 ttcattttc-aacaacttcttgatcattcaataataatccaagtaatgc 161  Q
    ||||||||| ||||||  ||||||||||| |||||| | ||||||||||    
T  27325630 ttcattttcaaacaacaacttgatcattccataatatttcaagtaatgc 27325582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 5616908 - 5616745
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  || | |||| ||| ||||| ||| |||||||||||||||    
T  5616908 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agtttaataacaaatcattctcagcaacttcttgatcat 5616811  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataa 204  Q
    |||| |||||| ||||| ||| | ||||||| |||| ||||   ||||||||||| || |||||||    
T  5616810 tcaacaataattcaagtaaatacaatcaatccataattcacttcataatcacttaacaattcataa 5616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 16523500 - 16523330
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac-----agctga--atatcaattca 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||     |  | |  |||||||||||    
T  16523500 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaactttatacttcatcatatcaattca 16523401  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
     ||||| |||| ||||||||||||||||||| | || ||||||| || ||||| ||||||||| ||||||||    
T  16523400 -tttcatcaacatcttgatcattcaataatatttcaggtaatgcaattaatcattaaatcacattataatca 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 19662787 - 19662958
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  19662787 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 19662883  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  19662884 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 19662958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 15894555 - 15894479
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  15894555 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 15894479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 2685407 - 2685236
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| || |    
T  2685407 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcga 2685311  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  2685310 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 2685236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 9482386 - 9482270
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| || |||||||||||||||||||||| | ||||||||| || |||||||||   | | |||| ||| ||||| ||||||| |||||||||||    
T  9482386 cttattcatacacatgcaacttagttaaataacatttgcagcataagcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgatcat 9482289  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  9482288 tcaacaataattcaagtaa 9482270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 20908098 - 20907955
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaat--------atcaattc 116  Q
    |||||||||||| ||| | |  |||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |  |||        | ||||||    
T  20908098 catcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaacaattc 20907999  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgc 161  Q
    | |||||||||| |||||||||||||| |||||| ||||||||||    
T  20907998 a-tttcaacaacatcttgatcattcaagaataattcaagtaatgc 20907955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 21766695 - 21766838
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||| ||||  ||||||||| |||||         |  |||||||||||    
T  21766695 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcaacataggcagatcacaacaacaacataatttcataatatcaattc 21766794  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgc 161  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||    
T  21766795 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgc 21766838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 18180494 - 18180655
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------ctgaatatcaattca 117  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||        |  || | |||||||    
T  18180494 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacattatacttcataacaacaattca 18180593  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    ||| ||||||| |||| |||||||||||||| | ||||||||||  | ||||| |||||||||    
T  18180594 ttt-caacaacatcttaatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 18180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 19848114 - 19848034
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  19848114 atcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagc 19848034  T

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Target: chr6; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1644300 - 1644359
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  1644300 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 1644359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 19790873 - 19790826
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19790873 gactcatgcaacttagttaaataacaacagcagcataatcagatcaca 19790826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 31478324 - 31478265
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  31478324 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 31478265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 15041667 - 15041589
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||  | |||||||  ||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  15041667 catcatcttgttcatcttataaagactcatgcaacttagttaaataacaatagtagcataggcagatcacaacaacagc 15041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 27553666 - 27553612
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  27553666 agactcatgcaacttagttaaagaacaacagcagcataatcagatcacaacaaca 27553612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 16624144 - 16624259
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  | || |||| ||||||||||    |||| ||||||||||    
T  16624144 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--aacttaataacaattcattt----caacatcttgatcat 16624237  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | ||||||||||    
T  16624238 tcaataatacttcaagtaatgc 16624259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 19873120 - 19873197
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  19873120 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 19873197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 27416278 - 27416124
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattc 141  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||       |||| |||| ||||||| |||||||||| ||||||||||||    
T  27416278 tattcatactcatgcaacttagttaaataacaattgcagcataatca-atca-------agcttaataacaattca-tttcaacaacatcttgatcattc 27416188  T
Q  142 aataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    | ||||| |   ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  27416187 attaatatttagagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 27416124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 1587824 - 1587711
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  1587824 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca--ggttaaataacaaatcattctcaatagtttcttgatcat 1587727  T
Q  140 tcaataataatccaag 155  Q
    |||| |||||| ||||    
T  1587726 tcaacaataattcaag 1587711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 23992429 - 23992509
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  23992429 atcaacatcttaatcaacttagactgactcatgcaacttagctaaataacaatagcagcataggcagattacatcaacagc 23992509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 31477895 - 31477789
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  31477895 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 31477802  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  31477801 tttcaagtaatgc 31477789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 12496333 - 12496437
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||   | |  ||| ||| ||||| ||||||| ||||||||||||||| |||| |     
T  12496333 catgcaacttagttaaataacatttgcagcataatcagatcacaaca--ggttctataacaaatcattctcaacaatttcttgatcattcaacaatattt 12496430  T
Q  152 caagtaa 158  Q
    |||||||    
T  12496431 caagtaa 12496437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 19862978 - 19863037
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||    
T  19862978 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcata 19863037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 21834915 - 21834833
Alignment:
Q  106 aatatcaattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| | |||||||| |  | ||||| ||||||||| ||||||||    
T  21834915 aatatcaattcattt-caacaacatcttgatcattcaataatatttcaagtaatacatttaatcattaaatcacattataatca 21834833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 22592884 - 22592780
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | | |||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  22592884 catgcaacttagttaaataacatttgtagcataatcaaatcacaacag--gtttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 22592787  T
Q  152 caagtaa 158  Q
    |||||||    
T  22592786 caagtaa 22592780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 23657513 - 23657468
Alignment:
Q  50 ctcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  23657513 ctcatgcaacttagttaaataacagcagcagcataatcagatcaca 23657468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 16760316 - 16760422
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||| |||||||||||| || |||||| ||||||||||||  ||| |||||  ||| |||| ||||||||||    |||| |||||||||||||||||||    
T  16760316 actcgtgcaacttagtttaacaacaattgcagcataatcaattcatatcaa--gcttaataacaattcattt----caacatcttgatcattcaataata 16760409  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  16760410 tttcaagtaatgc 16760422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 20803647 - 20803534
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||| ||||||| ||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  20803647 cttattcatattcatgcagcttagtttaataacaattgcagcataatcaaatcacatca--ggttaaataacaaatcattctcaatagtttcttgatcat 20803550  T
Q  140 tcaataataatccaag 155  Q
    |||| |||||| ||||    
T  20803549 tcaacaataattcaag 20803534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 27567704 - 27567656
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  27567704 agactcatacaacttagttaaataacagcagcagcataatcagatcaca 27567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 21702300 - 21702359
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  21702300 cttattcataatcatgcaacttaattaaataacaattgcagcaaaatcaaatcacatcaa 21702359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 22432249 - 22432308
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  22432249 catcatcttgatcatcttataccgactcatgcaacttggttaattaacaatagcagcata 22432308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 22438799 - 22438858
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  22438799 catcatcttgatcatcttataccgactcatgcaacttggttaattaacaatagcagcata 22438858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 31478169 - 31478076
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||||| |||||| ||||||||||||||||||| | ||||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  31478169 caattcatttt-aacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 31478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 22408398 - 22408345
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||| |||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  22408398 agactcgtgcaacttggttaaataacaaaagcagtataatcagatcacaacaac 22408345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 25642304 - 25642227
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||  ||||| ||| ||||||    
T  25642304 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaacaacag 25642227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 17287917 - 17287854
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| ||||    
T  17287917 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 17287854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 22335014 - 22334955
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||    
T  22335014 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcata 22334955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 21740148 - 21740094
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||| ||||| |  |||||| |||||| |||||||||||||||||||    
T  21740148 catcatcttaatcatcttgtatagactcgtgcaacatagttaaataacaatagca 21740094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 25714417 - 25714475
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||||||| | ||||  | |||||||||| |||||||||||||||| ||||    
T  25714417 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagca 25714475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 27415901 - 27415859
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  27415901 atcacattataatcacttaacatttcacaatagcttcacagtt 27415859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 1595549 - 1595610
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa 85  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| |||||    
T  1595549 tcatcatcttaatcaacttagactgactcatgcagcttagttaaataacaacagcaacataa 1595610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 19303661 - 19303608
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||| || ||||||  | |||||||||| ||||||||||||||||    
T  19303661 acatcatcatcttcatcatcttagaccgactcatgcagcttagttaaataacaa 19303608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 27333339 - 27333286
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  27333339 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 27333286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 27394079 - 27394026
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  27394079 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 27394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 34963371 - 34963428
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||| ||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  34963371 catcaacatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 34963428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 22074307 - 22074251
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||||| | ||||||||||| |||| ||||| || ||||||||| |||||||    
T  22074307 agactcatgcatcatagttaaataataataacagcacaagcagatcacaacaacagc 22074251  T

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Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 25656629 - 25656689
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| ||||    
T  25656629 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 25656689  T

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Target: chr3 (Bit Score: 164; Significance: 8e-88; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 20461612 - 20461417
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||    
T  20461612 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacaacttaatatcaattcatctt 20461513  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20461512 caacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 20461417  T

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Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 2897935 - 2897740
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  2897935 catcatcaacttgattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaatttatttt 2897836  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    || |||||||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2897835 catcaacttcttgatcattcaataataattccagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 2897740  T

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Target: chr3; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 7793462 - 7793266
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataat-cagatcacatcaacagctgaatatcaattcattt 120  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| |    
T  7793462 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataattcagatcacatcaacagcttaatatcaattcatct 7793363  T
Q  121 tcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  7793362 tcaacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaacaaatcacattataatcacttagcatttcataatagcttcacagtt 7793266  T

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Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 15482675 - 15482852
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||    
T  15482675 cttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttgagcat 15482774  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15482775 tcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 15482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 327277 - 327081
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa-tcagatcacatcaacagctgaatatcaattcattt 120  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||| |    
T  327277 catcatcaatttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataactaagatcacatcaacagcttaatatcaattcatct 327178  T
Q  121 tcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  327177 tcaacaatttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 327081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 30065970 - 30066135
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  30065970 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 30066069  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  30066070 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 30066135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 15617398 - 15617563
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  15617398 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaagttcctgatcattcaataata 15617497  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||  |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  15617498 attcaagtaatgtaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 15617563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 7109722 - 7109887
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  7109722 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 7109821  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  7109822 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 7109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 7113657 - 7113822
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  7113657 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 7113756  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  7113757 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 7113822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 11854757 - 11854922
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| |||||||||||||||||||||||    
T  11854757 actcatgcaacttagtttaataacaatagcagcataatcagatcatatcaacaacttaacatcaattcattttcaataacttcttgatcattcaataata 11854856  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  11854857 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 11854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 22336743 - 22336908
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  22336743 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 22336842  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  22336843 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 22336908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 27409729 - 27409564
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  27409729 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 27409630  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  27409629 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 27409564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 28949748 - 28949913
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  28949748 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 28949847  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  28949848 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 28949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 55022891 - 55023056
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  55022891 actcatgtaacttagttaaataacaatagcagtataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 55022990  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  55022991 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 55023056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 11070092 - 11070257
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  11070092 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaagaata 11070191  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| |||||||||||||   |||||||||||    
T  11070192 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcgatatagcttcaca 11070257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 11165614 - 11165449
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  11165614 actcatgtaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 11165515  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||| ||||||||  |||| ||||||    
T  11165514 attcaagtaatgcaatcaatcaataaatcacattataaacacttggcatttcaatatagtttcaca 11165449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 22321688 - 22321853
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  22321688 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaatagcttaataccaattcattttcaacaacttcctgatcattcaataata 22321787  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  22321788 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 22321853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 14499349 - 14499514
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| | |||||||||||||  |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  14499349 actcatgcaacttagttaaataacaataaccgcataatcagatcttatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 14499448  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| || |||||||||||  |||||||||||    
T  14499449 attcaagtaatgcaatcaatcaataaatcacattataaacaattagcatttcaatatagcttcaca 14499514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 31097649 - 31097471
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||    
T  31097649 cttattcagactcatgcaacatagttaattaacaattgcagcataatcagatcacatcaatagcttaataacaattcattttcaacaatttcttgatcat 31097550  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatt-tcataatagcttcacagtt 217  Q
    |||| |||||| |||||| ||  ||||||||||| ||||||  |||||||||||||||| |||||| ||||||||||||    
T  31097549 tcaacaataattcaagtagtggaatcaatcaatatatcacaacataatcacttagcattctcataaaagcttcacagtt 31097471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 213
Target Start/End: Complemental strand, 15850176 - 15850006
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||  | | |||| ||||||||||||| ||| |||||||||||    
T  15850176 cttattcagtctcatgcaacttagttaaataacaattgcagcataatcagatcatatcaa--gtttaataacaattcattttca-caatttcttgatcat 15850080  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcac 213  Q
    |||| |||||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||||| ||||||||    
T  15850079 tcaacaataattcaagttatgcaatcaatccatatatcacaatataatcatttagcatttcataaaagcttcac 15850006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 14668554 - 14668700
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-----ct---gaatatcaa 113  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||    ||||||||    
T  14668554 catcatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagtataactttataatatcaa 14668653  T
Q  114 ttcattttcaacaacttcttgatcattcaataataatccaagtaatgc 161  Q
    |||| |||||||||| ||||||||||||||||||| | ||||||||||    
T  14668654 ttca-tttcaacaacatcttgatcattcaataatatttcaagtaatgc 14668700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 189
Target Start/End: Complemental strand, 19726004 - 19725857
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc-tg------aatatcaattcattttcaacaacttcttgatcatt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      |||||||||||| |||||||||| |||||||||||    
T  19726004 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcatgactcataatatcaattca-tttcaacaacatcttgatcatt 19725906  T
Q  141 caataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
    |||||||| | |||||||||  || ||||| ||||||||| ||||||||    
T  19725905 caataatatttcaagtaatgtaattaatcattaaatcacattataatca 19725857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 11300539 - 11300435
Alignment:
Q  106 aatatcaattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataat 205  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||  ||    
T  11300539 aatatcaattcattttcaataacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatat 11300440  T
Q  206 agctt 210  Q
    |||||    
T  11300439 agctt 11300435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 14665398 - 14665570
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-----ct---gaatatcaa 113  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     ||    ||||||||    
T  14665398 catcatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcaacataatcagatcacatcaacagtataactttaaaatatcaa 14665497  T
Q  114 ttcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    |||| |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  14665498 ttca-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 14665570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 15464878 - 15465040
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  15464878 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 15464974  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| |||||||||||| || | |||||||| |||||||    
T  15464975 tcaataatatttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataa 15465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 18384032 - 18383837
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca-------gctgaatatcaattca 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||        |   |||||||||||    
T  18384032 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattatacttcatcatatcaattca 18383933  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcac 213  Q
     ||||| |||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| || ||||| |||| || ||||||| ||||||||    
T  18383932 -tttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattaaaatcagcttaacagttcataacagcttcac 18383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 5223077 - 5223239
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  5223077 cttattcatactcatacaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 5223173  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  5223174 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 5223239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 8489564 - 8489459
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  8489564 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 8489468  T
Q  140 tcaataata 148  Q
    |||||||||    
T  8489467 tcaataata 8489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 322592 - 322789
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctga-------atatcaattca 117  Q
    ||||||| |||| ||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |    |       |||||||||||    
T  322592 catcatcataatcatcttgtatagactcatgcaacttagttaaataacaatagcggcataatcagatcacaacaatattatacttcatcatatcaattca 322691  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    ||| || |||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| |||||||| |||| || ||||||| ||||||||||    
T  322692 ttt-catcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacacttcataacagcttcacag 322789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 16798147 - 16797974
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||| ||||| ||||||||  ||| |||||||| ||||||||||   || |||| ||| ||||||||||||| |||||||||||    
T  16798147 cttattcatactcatgcaacatagtttaataacaagtgcaacataatcaaatcacatcaaa--cttaataacaaatcattttcaacaatttcttgatcat 16798050  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    |||| |||||| ||||| ||| | ||||||| |||| ||||  |||||||||||| |||||| ||| |||||||||    
T  16798049 tcaacaataattcaagtaaatacaatcaatccataattcactttataatcacttaacatttcgtaaaagcttcaca 16797974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 11862793 - 11862991
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcac----at----caacagctgaatatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    ||     |||  |  |||||||||||    
T  11862793 catcatcttaatcatcttgtaaagactcatgcaacttagttaaataacaatagcagcataatcagatcaccaaaatattataacttcataatatcaattc 11862892  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    | |||||||||| ||||| ||||||||||||| | |||||||||| || ||||| |||||||||  ||||||| |||| || ||||||  ||||||||||    
T  11862893 a-tttcaacaacatcttggtcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacag 11862991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 12038068 - 12037871
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||||| |||||||  | |||||||||||||||||||||||||| |||||||||||||||||||| |||||         |  || | ||||||    
T  12038068 catcatcttaatcatcttatataaactcatgcaacttagttaaataacaa-agcagcataatcagatcacaacaacattataatttcataacaacaattc 12037970  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    | |||||||||| |||||||||||||||||||   |||||||||| || ||||| ||||||||| ||||||| ||||| ||||||| ||| | |||||||    
T  12037969 a-tttcaacaacatcttgatcattcaataatatctcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcaaaatggtttcacag 12037871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 12339479 - 12339641
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||  || |||||  || | |||| ||||||| |||||||||| ||||||||||    
T  12339479 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaattctcatca--agtttaataacaattca-tttcaacaacatcttgatcat 12339575  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  12339576 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 12339641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 11851581 - 11851778
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||| |||| |||||||| |||||||| |||||         |  |||||||||||    
T  11851581 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacgatagtagcataattagatcacaacaacattataacttcataatatcaattc 11851680  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcaca 214  Q
    | |||||||||| ||||| ||||||||||||| | |||||||||| || ||||| |||||||||  ||||||| |||| || ||||||  |||||||||    
T  11851681 a-tttcaacaacatcttgttcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcaca 11851778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 12172796 - 12172872
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12172796 catcatcataatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 12172872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 12496257 - 12496420
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc---------tgaatatcaatt 115  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||         | | ||||||||    
T  12496257 catcatcttattcatcttataatgactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaacagcataacttcataattatcaatt 12496356  T
Q  116 cattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    || |||| ||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  12496357 ca-tttctacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 12496420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 16808974 - 16808801
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||  ||||| ||||||||  ||| |||||||| ||||||||||  ||| |||| ||| |||||| |||||| ||||||| |||    
T  16808974 cttattcatactcatgcaatatagtttaataacaagtgcaacataatcaaatcacatcaa--gcttaataacaaatcatttgcaacaatttcttgaccat 16808877  T
Q  140 tcaataataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    |||| |||||| ||||||| | | ||||||| |||| ||||  |||||||||||| |||||| ||| |||||||||    
T  16808876 tcaacaataattcaagtaaatacaatcaatccataattcactttataatcacttaacatttcgtaaaagcttcaca 16808801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 11298644 - 11298482
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||         |  |||||||||||    
T  11298644 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacaacataatttcataatatcaattc 11298545  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  11298544 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 11298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 11300854 - 11300723
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| | | |||| ||||||| |||||||||| ||||||||||||||    
T  11300854 ttcagactcatgcaacttagttaaataacaattgtagcataatcaaatcacat-aac-gtttaataacaattca-tttcaacaacatcttgatcattcaa 11300758  T
Q  144 taataatccaagtaatgccatcaatcaataaatca 178  Q
    ||||| | | ||||||||  | ||||| |||||||    
T  11300757 taatatttcgagtaatgcatttaatcattaaatca 11300723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 11854430 - 11854535
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||  |||| |||| ||||||| |||||||||| |||| ||| |    
T  11854430 cttattcatactcatgcaacttagttaaataacaattgcggcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttaatctt 11854526  T
Q  140 tcaataata 148  Q
    |||||||||    
T  11854527 tcaataata 11854535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 17241990 - 17242161
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  17241990 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 17242086  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  17242087 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 17242161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 23053200 - 23053128
Alignment:
Q  29 atcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||    
T  23053200 atcttaatcatcttatatagactcatgcaacatagttaaataacaatagcagcataagcagatcacaacaaca 23053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 3403050 - 3403003
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403050 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 3403003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 1982905 - 1982851
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  1982905 agactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaaca 1982851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 16750682 - 16750567
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| ||||||||||    
T  16750682 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcat 16750589  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | ||||||||||    
T  16750588 tcaataatatttcaagtaatgc 16750567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 3390030 - 3389983
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3390030 gactcatgcaacttagttaaataacaacagcagcataatcagatcaca 3389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4589287 - 4589228
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  4589287 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 4589228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 19775360 - 19775419
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  19775360 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 19775419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 38814409 - 38814513
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  38814409 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 38814506  T
Q  152 caagtaa 158  Q
    |||||||    
T  38814507 caagtaa 38814513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 46822267 - 46822345
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  46822267 atcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaaca 46822345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 12511084 - 12511137
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  12511084 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaaca 12511137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 4111334 - 4111228
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  4111334 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 4111241  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  4111240 tttcaagtaatgc 4111228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 11557477 - 11557425
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  11557477 actcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 11557425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 15878168 - 15878092
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  15878168 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 15878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 15964993 - 15965099
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  15964993 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 15965086  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  15965087 tttcaagtaatgc 15965099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 15968917 - 15969023
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  15968917 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 15969010  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  15969011 tttcaagtaatgc 15969023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 15972841 - 15972947
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  15972841 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 15972934  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  15972935 tttcaagtaatgc 15972947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 19775789 - 19775895
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  19775789 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 19775882  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  19775883 tttcaagtaatgc 19775895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 23077594 - 23077518
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||||||| |||||||||||| |||| ||||  ||||||||| |||||    
T  23077594 catcatcttaatcatcttatatagactcatgcaacttggttaaataacaacagcaacataggcagatcacaacaaca 23077518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 3833699 - 3833803
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| | ||||||||||||| ||||||     
T  3833699 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaagtcattctcaacaattgcttgatcattcaacaataatt 3833796  T
Q  152 caagtaa 158  Q
    |||||||    
T  3833797 caagtaa 3833803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11595233 - 11595186
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  11595233 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 11595186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 14878633 - 14878574
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||    
T  14878633 catcatcttattcatcttatattgactcatgcaacttagttaaataacaatagcagcata 14878574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 16696798 - 16696857
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  16696798 cttattcataatcatgcaacttagttaaataacaattgcagcataaacaaatcacatcaa 16696857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 856140 - 856216
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||||||| ||||||||||||| ||||  ||||| ||| |||||    
T  856140 catcatcttaatcatcttatatcgactcatgcaacttagttgaataacaatagcaacataggcagattacaacaaca 856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 4107482 - 4107376
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  4107482 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 4107389  T
Q  149 atccaagtaatgc 161  Q
     | ||| ||||||    
T  4107388 tttcaactaatgc 4107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 26196548 - 26196500
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataaca 73  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||    
T  26196548 catcatcttaatcatcttatatagactcatgcaacttagttaaataaca 26196500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 37439721 - 37439615
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| | ||||||||||  ||| |||||  ||| |||| ||||||||||    |||| |||||||||||||||||||    
T  37439721 actcatgcaacttagtttaacaacaattgtagcataatcaattcatatcaa--gcttaataacaattcattt----caacatcttgatcattcaataata 37439628  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  37439627 tttcaagtaatgc 37439615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 15941985 - 15941938
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  15941985 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 15941938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 30029867 - 30029922
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| ||| |||||||    
T  30029867 gactcatgcaacttagtttaataacaatagcagcatagacagattacaacaacagc 30029922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 42325964 - 42326011
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  42325964 gactcatgcaacttagttaaaaaacagcagcagcataatcagatcaca 42326011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 23408428 - 23408506
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||||||    
T  23408428 catcatcttgatcatcttatactgactcatgcaacttggttaattaacaatagcaacatagacagattacaacaacagc 23408506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 1598560 - 1598464
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc-tgaatatcaattcattttcaacaacttcttgatcattcaataataat 150  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||  ||| | |||| ||| ||||||||||||| |||||||||| | || ||||||    
T  1598560 catgcaacttagttaaataac-attgcagcataatcaaatcacatca--agcttaaataacaaatcattttcaacaa-ttcttgatcaattaacaataat 1598465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 15051531 - 15051584
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  15051531 gactcatgcaacttggttaaataacaatagcagcataggcagttcacaacaaca 15051584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 15060307 - 15060360
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  15060307 gactcatgcaacttggttaaataacaatagcagcataggcagttcacaacaaca 15060360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 16909765 - 16909818
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||||    
T  16909765 gactcatgcaacttggttaaataacaatagtagcataagcagttcacaacaaca 16909818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 17525252 - 17525216
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17525252 gactcatgcaacatagttaaataacaatagcagcata 17525216  T

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Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 1982833 - 1982730
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagctt 210  Q
    |||||||||||||||||| | | | |||||||| |||| | ||||||||||  | ||||| ||||||||| || ||| ||||| || ||||||| | |||    
T  1982833 caattcattttcaacaacatataggtcattcaaaaatagttcaagtaatgcatttaatcattaaatcacattacaataacttaacagttcataacaactt 1982734  T
Q  211 caca 214  Q
    ||||    
T  1982733 caca 1982730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 16454443 - 16454388
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  16454443 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 16454388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 23083482 - 23083419
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| || | ||||  | |||||||||| ||||||||||||||||||||| ||||    
T  23083482 acatcatcatcttcatcaacttagaccgactcatgcagcttagttaaataacaatagcaacata 23083419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 4589125 - 4589039
Alignment:
Q  119 tttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    |||||||||| ||||||||||||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  4589125 tttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 4589039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 19775515 - 19775608
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||||| |||||| ||||||||||||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  19775515 caattcatttt-aacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 19775608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 16369423 - 16369476
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||| ||||||||||||||||  ||| ||||| |||||    
T  16369423 gactcatgcaacttggttaagtaacaatagcagcataggcagttcacaacaaca 16369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 15060428 - 15060492
Alignment:
Q  152 caagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    |||||||||  || ||||| ||||||||| |||||||| |||| || ||||||||||||||||||    
T  15060428 caagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataatagcttcacag 15060492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 24153326 - 24153266
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||| |||||| ||||    
T  24153326 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacgatagcaacata 24153266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 8e-88; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 24735397 - 24735592
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  24735397 catcatcactttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 24735496  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24735497 caacaacttcttgatcattcaataataattcaagtaatgcgatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 24735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 10101730 - 10101565
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  10101730 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 10101631  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  10101630 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 10101565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 24649378 - 24649543
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  24649378 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 24649477  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  24649478 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 24649543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 12901597 - 12901432
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  12901597 actcatgcaacttagttaaataacaataacagcataatcggatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 12901498  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12901497 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 12901432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 27379518 - 27379353
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  27379518 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 27379419  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    ||  ||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  27379418 attaaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 27379353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 27383564 - 27383399
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  27383564 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 27383465  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    ||  ||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  27383464 attaaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 27383399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 27601817 - 27601982
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  27601817 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 27601916  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  27601917 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 27601982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 24628564 - 24628399
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | || ||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  24628564 actcatgtaacttagttaaataacaatagcagcataatcagattatattaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 24628465  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||| ||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  24628464 attcaagcaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 24628399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 19688779 - 19688673
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagctt 210  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  19688779 caattcatcttcaacaatttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagctt 19688680  T
Q  211 cacagtt 217  Q
    |||||||    
T  19688679 cacagtt 19688673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 41531089 - 41530930
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| |||||  ||| |||| ||||||||||    |||| |||||||||||||||||||    
T  41531089 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatcaa--gcttaataacaattcattt----caacatcttgatcattcaataata 41530996  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  41530995 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 41530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 31344890 - 31345008
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  31344890 cttattcatactcatgcaacttagttaaataataattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 31344986  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | | ||||||||    
T  31344987 tcaataatatttcgagtaatgc 31345008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 22812028 - 22811856
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||         |   ||||||||||    
T  22812028 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcaaatcacaacaacattataacttcatcatatcaattc 22811929  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgcca-tcaatcaataaatcacactataatca 189  Q
    | |||||||||| ||||||||||||||||||| | || ||||||| | | ||||| ||||||||| ||||||||    
T  22811928 a-tttcaacaacatcttgatcattcaataatacttcaggtaatgcaatttaatcattaaatcacattataatca 22811856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 15477711 - 15477789
Alignment:
Q  136 tcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  15477711 tcattcaataataattcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 15477789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 25963832 - 25963670
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||        |  |||||||||||    
T  25963832 catcatcttattcatcttataatgactcatgcaacttagttcaataacaatagcagcataggcagatcacaacaacagcataatttcataatatcaattc 25963733  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  25963732 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 25963670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 21916215 - 21916072
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||| | || ||||||||||||||| ||| ||        |  |||||||||||    
T  21916215 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaaaaacaacataatcagatcacaacaaaagcataaattcataatatcaattc 21916116  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgc 161  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||    
T  21916115 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgc 21916072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 22461277 - 22461106
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  22461277 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 22461181  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  22461180 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 22461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 25961628 - 25961488
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||         |  || | |||||||||||||||||| ||| ||||||    
T  25961628 gactcatgcaacttagttaaataacaacagcagcataatcagatcacaacaacattataacttcataacaacaattcattttcaacaacatctagatcat 25961529  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||| |||||| ||||||||||  | ||||| |||||||||    
T  25961528 tcaagaataattcaagtaatgcatttaatcattaaatcaca 25961488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 41666962 - 41667078
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  41666962 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 41667059  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| || ||| |||||||    
T  41667060 tcaacaacaattcaagtaa 41667078  T

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Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 37524697 - 37524751
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  37524697 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacatcaaca 37524751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 22799243 - 22799167
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  22799243 catcatcttattcatcttatattgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaaca 22799167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 24716645 - 24716569
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  24716645 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 24716569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 24869902 - 24869950
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24869902 agactcatgcaacttagttaaataacaacagcagcataatcagatcaca 24869950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 19928583 - 19928487
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataat 150  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||    
T  19928583 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataat 19928487  T

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Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 21318731 - 21318590
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc---------tgaatatcaattcattttcaacaacttcttgatc 137  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||         | | |||||||||| |||| ||||| |||||||     
T  21318731 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacagcagcataacttcataattatcaattca-tttctacaacatcttgatt 21318633  T
Q  138 attcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||||| ||||   |||||||||| || |||||||||||||||    
T  21318632 attcaacaatatctcaagtaatgcaattaatcaataaatcaca 21318590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 21327662 - 21327521
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc---------tgaatatcaattcattttcaacaacttcttgatc 137  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||         | | |||||||||| |||| ||||| |||||||     
T  21327662 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacagcagcagcataacttcataattatcaattca-tttctacaacatcttgatt 21327564  T
Q  138 attcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||||| ||||   |||||||||| || |||||||||||||||    
T  21327563 attcaacaatatctcaagtaatgcaattaatcaataaatcaca 21327521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 24174822 - 24174876
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  24174822 agactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 24174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 24673569 - 24673639
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| | |||||||||||||| | |||||||||||||||||||| || |||||||||    
T  24673569 catcatcttaatcatcttgtacagactcatgcaacatggttaaataacaatagcagcacaagcagatcaca 24673639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 23019823 - 23019747
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||  ||||||||||||||||||||||||||||  ||||||||| |||||    
T  23019823 catcatcttaatcatcttatattgactcataaaacttagttaaataacaatagcagcataggcagatcacaacaaca 23019747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 30345076 - 30344970
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  30345076 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 30344983  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  30344982 tttcaagtaatgc 30344970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 18855541 - 18855438
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    ||||||||||||||||| |||| | |||||||||||| |||||||||  |||| |||| ||| ||||| ||||||| |||||||||| | || ||||||     
T  18855541 catgcaacttagttaaacaacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa-ttcttgatcaattaacaataatt 18855445  T
Q  152 caagtaa 158  Q
    |||||||    
T  18855444 caagtaa 18855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 25616212 - 25616267
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||||||||||||| ||||||||||||||  ||||| |||||||||||    
T  25616212 gactcatgcaacttagttaaattacaatagcagcataggcagattacatcaacagc 25616267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 24655433 - 24655379
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  24655433 agactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaaca 24655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 27263285 - 27263343
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  27263285 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 27263343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 60829 - 60941
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  60829 cttattcatattcatgcaacttagtttaataacaattgcagcataatca-atcacatca--ggttaaataacaaatcattctcaatagtttcttgatcat 60925  T
Q  140 tcaataataatccaag 155  Q
    |||| |||||| ||||    
T  60926 tcaacaataattcaag 60941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 1283410 - 1283516
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||| | || |||||| ||||||||||||  ||| |||||  ||| |||| ||||||||||    |||| |||||||||||||||||||    
T  1283410 actcatgcaacttagattaacaacaattgcagcataatcaattcatatcaa--gcttaataacaattcattt----caacatcttgatcattcaataata 1283503  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  1283504 tttcaagtaatgc 1283516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 24673713 - 24673777
Alignment:
Q  152 caagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    |||||||||| || ||||| ||||||||| |||||||| |||| |||||||||||||||||||||    
T  24673713 caagtaatgcaattaatcattaaatcacagtataatcagcttaacatttcataatagcttcacag 24673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 40622327 - 40622251
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||||||||  ||||| ||| |||||    
T  40622327 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcagcataggcagattacaacaaca 40622251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 24680191 - 24680258
Alignment:
Q  28 catcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||| ||||| | |||||||| ||||| | |||||||||||||||||||| || |||||||||    
T  24680191 catcttaatcatcttgtacagactcaagcaacatggttaaataacaatagcagcacaagcagatcaca 24680258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 40428486 - 40428533
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  40428486 gactcatgcaacttagttcaataacaaaagcagcatattcagatcaca 40428533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 22741081 - 22741004
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||  ||||| ||| ||||||    
T  22741081 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaacaacag 22741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 45678246 - 45678189
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |   |||||||||||| ||||||||||||||||||||||    
T  45678246 catcatcttaatcatcttgtatggactcatgcaacatagttaaataacaatagcagca 45678189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 23187088 - 23187204
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||| ||||| ||| ||||||||| |||||||||||| |||| ||||   | | ||||  || ||||| |||| |  |||||||||||    
T  23187088 cttattcatactcatggaacttggtttaataacaattgcagcataatcaaatcatatca--ggttaaataaaaaatcattctcaatagtttcttgatcat 23187185  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  23187186 tcaacaataattcaagtaa 23187204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 23598351 - 23598467
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||| ||||| ||| ||||||||| |||||||||||| |||| ||||   | | ||||  || ||||| |||| |  |||||||||||    
T  23598351 cttattcatactcatggaacttggtttaataacaattgcagcataatcaaatcatatca--ggttaaataaaaaatcattctcaatagtttcttgatcat 23598448  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  23598449 tcaacaataattcaagtaa 23598467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 23038054 - 23038108
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  23038054 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 23038108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 22758836 - 22758759
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || |||||||   |||||||||||||   |||||||||||||||||||||  ||||| ||| ||||||    
T  22758836 catcatcttgatcatcttatatcgactcatgcaactagtttaaataacaatagcagcatagacagattacaacaacag 22758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 22105412 - 22105472
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| ||||    
T  22105412 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 22105472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 23040310 - 23040246
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa 85  Q
    ||||||||||||| || | ||||  | |||||||||| |||||||||||||||| |||| |||||    
T  23040310 acatcatcatcttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataa 23040246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 24783212 - 24783020
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  24783212 catcatcatcttaatcatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatgaacagcttaatatcaattcatttt 24783113  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    ||||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  24783112 caacaacttcttgatcattcaataataattcaagtaatgcaattaattaataaatcacattataatcacttagcatttcataacagcttcaca 24783020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 16080536 - 16080361
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattc 141  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||||| |    
T  16080536 tattcagactcatgcaacttagttaattaaaaatagcagcataatcagatcacatcaataacttattatcaattcattttcaacaacttcttgatcatcc 16080437  T
Q  142 aataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  16080436 aataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataaaagcttcacagtt 16080361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 36819403 - 36819225
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaa-ttcattttcaacaacttcttgatca 138  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  36819403 cttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaccagcttaatatcaaattcattttcaacaacttcttgatca 36819304  T
Q  139 ttcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||||| |||| ||||| |||||| ||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  36819303 ttcaataataattcaagaaatgcaatcaataaataaatcacaatataatcacttaacatttcataaaagcttcacagtt 36819225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 1010744 - 1010909
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  1010744 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 1010843  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  1010844 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 1010909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 20228894 - 20228729
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20228894 actcatgcaacttagtttaataacaatggcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 20228795  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  20228794 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 20228729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 16375543 - 16375378
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  16375543 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 16375444  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  16375443 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 16375378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 21407376 - 21407541
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  21407376 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 21407475  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  21407476 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 21407541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 52639562 - 52639727
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  52639562 actcatgtaacttagttaaataacaataacagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 52639661  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  52639662 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 52639727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 19211883 - 19212056
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||  |||| |||| ||||||||| ||||||| ||||||||||||||    
T  19211883 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacgtca--agcttaataacaattcattctcaacaatttcttgatcattca 19211980  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    | |||||| ||||| ||| | ||||||| |||| ||||  |||||||||||| |||||||||| ||||||||||||    
T  19211981 acaataattcaagtaaatacaatcaatccataattcactttataatcacttaacatttcataaaagcttcacagtt 19212056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 18182237 - 18182037
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        |  ||||||||||     
T  18182237 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatcaattt 18182138  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    | |||||||||| ||||||||||||||||||| | |||||||||| || ||||| | ||||||| ||||| | ||||||||| |||||| ||||||||||    
T  18182137 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattgaatcacattataaacaacttagcatctcataacagcttcacag 18182039  T
Q  216 tt 217  Q
    ||    
T  18182038 tt 18182037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 23819383 - 23819216
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||| ||| ||||||||| ||||||||||||  ||| |||||  ||| |||| ||||||||||||| ||| ||||||||||||||||||||    
T  23819383 actcatgcaacttcgtttaataacaattgcagcataatcaattcatatcaa--gcttaataacaattcattttcagcaatttcttgatcattcaataata 23819286  T
Q  149 atccaagtaatg-ccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    || ||||||| | | ||||||| |||||||||  |||| ||||||| ||| |||||| ||||||||||||    
T  23819285 attcaagtaaagacaatcaatccataaatcactttatattcacttaacatctcataaaagcttcacagtt 23819216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 22449382 - 22449184
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatca--at-tca---- 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||  ||| |||  || |||        
T  22449382 catcatcttaatcatcttgtatagactcatgcaacttagttaaataatagtagcagcataatcagatcacaacaagagcataatttcataatatcaatac 22449283  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    ||||||||||| ||||||||||||||||||| | |||||||||  || ||||| ||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  22449282 ttttcaacaacatcttgatcattcaataatatttcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataacagcttcacag 22449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 33797295 - 33797457
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  33797295 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 33797391  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | | ||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  33797392 tcaataatatttcgattaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 33797457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 21313122 - 21313185
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21313122 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataa 21313185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 3473039 - 3472843
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcac------atcaacagctgaatatcaattcat 118  Q
    ||||| |||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||      || |||  |  |||||||| |||     
T  3473039 catcaacttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaagagtattaacttcataatatcaaatca- 3472941  T
Q  119 tttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
     ||||||||| |||||||||||||| |||| | |||||||| |  | ||||| ||||||||| |  || | |||||||||||||||| ||||||||||    
T  3472940 cttcaacaacatcttgatcattcaacaatatttcaagtaattcatttaatcattaaatcacatttcaaacaacttagcatttcataacagcttcacag 3472843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 20138099 - 20138209
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| ||||||| ||||||| ||||||    
T  20138099 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgaacattca 20138196  T
Q  143 ataataatccaag 155  Q
    | |||||| ||||    
T  20138197 acaataattcaag 20138209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 18882393 - 18882496
Alignment:
Q  53 atgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatcc 152  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||  |||| |||| ||| ||||| ||||||| ||||||||||||||| |||||| |    
T  18882393 atgcaacttagttaaataacattttcagcataatcaaatcacatca--agcttaataacaaatcattatcaacaatttcttgatcattcaacaataattc 18882490  T
Q  153 aagtaa 158  Q
    ||||||    
T  18882491 aagtaa 18882496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 12646888 - 12647059
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||| ||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  12646888 ttcagattcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 12646984  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  12646985 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 12647059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17678702 - 17678626
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  17678702 catcatcttattcatcttataacgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 17678626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 3705159 - 3705105
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  3705159 agactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 3705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 21788159 - 21788081
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||    
T  21788159 catcatcttattcatcttatattgactcatgcaacttagttaaataaccatagcagcataggcagatcacaacaacagc 21788081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 46975494 - 46975596
Alignment:
Q  54 tgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatcca 153  Q
    |||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| |||||| ||    
T  46975494 tgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataattca 46975591  T
Q  154 agtaa 158  Q
    |||||    
T  46975592 agtaa 46975596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 1925214 - 1925108
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  1925214 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 1925121  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  1925120 tttcaagtaatgc 1925108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 20924228 - 20924122
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  20924228 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 20924135  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  20924134 tttcaagtaatgc 20924122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 18394059 - 18394012
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18394059 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 18394012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 33050118 - 33050067
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  33050118 actcatgcaacttagttaaataacagcagcagcataatcagatcacaacaac 33050067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 45310462 - 45310415
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  45310462 gactcatgcaacttagttaaataacgacagcagcataatcagatcaca 45310415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 8761728 - 8761587
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaa---------tatcaattcattttcaacaacttcttgatc 137  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||| ||||| |  ||         ||||||||||||| ||||||| |||||||     
T  8761728 agactcatgcatcatagttaaataacaataacagcacaagcagatcacaacaacaacataacttcataattatcaattcattt-caacaacatcttgatt 8761630  T
Q  138 attcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||||||||||   |||||||||| || |||||||||||||||    
T  8761629 attcaataatatctcaagtaatgcaattaatcaataaatcaca 8761587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 20229323 - 20229208
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| |||| ||||||||||||||||||||||  ||||||||||| ||||||| |  || | |||| ||| ||||| |||| |  |||||||||||    
T  20229323 cttattcatactcttgcaacttagttaaataacaattccagcataatcaaatcacatta--agttaaataacaaatcattctcaaaagtttcttgatcat 20229226  T
Q  140 tcaataataatccaagta 157  Q
    |||| || ||| ||||||    
T  20229225 tcaacaacaattcaagta 20229208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 21022631 - 21022701
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| |  ||||||||||||| |||||||||||||||||||||| |  |||||||||    
T  21022631 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaggcagatcaca 21022701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 6151848 - 6151905
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||    
T  6151848 catcatcttaatcatcttgtatagactcatgcaacgtagttaaataacaatagcagca 6151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22468816 - 22468735
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||| ||||  ||||| ||| |||||||    
T  22468816 catcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcaacataggcagattacaacaacagc 22468735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 22831503 - 22831446
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||    
T  22831503 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagca 22831446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 39244235 - 39244120
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  | || ||||  |||||||||    |||| ||||||||||    
T  39244235 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--aacttaataagaattcattt----caacatcttgatcat 39244142  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | ||||||||||    
T  39244141 tcaataatatttcaagtaatgc 39244120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 39247790 - 39247675
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  | || ||||  |||||||||    |||| ||||||||||    
T  39247790 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--aacttaataagaattcattt----caacatcttgatcat 39247697  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | ||||||||||    
T  39247696 tcaataatatttcaagtaatgc 39247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 41388335 - 41388220
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||  ||||  |||| ||||  |||||||||    |||| ||||||||||    
T  41388335 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcgtatca--agcttaataaaaattcattt----caacatcttgatcat 41388242  T
Q  140 tcaataataatccaagtaatgc 161  Q
    ||||||||| | ||||||||||    
T  41388241 tcaataatatttcaagtaatgc 41388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 20135188 - 20135267
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||| ||||||||| | ||||  | ||||||||||||||||||||| |||||||||||||||  ||||| ||| |||||    
T  20135188 catcaacatcttaatcaacttagactgactcatgcaacttagttaaacaacaatagcagcataggcagattacaacaaca 20135267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 45489837 - 45489790
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||    
T  45489837 gactcatgcaacttagttaaataatagcagcagcataatcagatcaca 45489790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 20091593 - 20091534
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||    
T  20091593 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcata 20091534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 42865330 - 42865271
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||| ||||||||||||||||||| ||||    
T  42865330 catcatcttgatcatcttatatcgactcatgcaacatagttaaataacaatagcaacata 42865271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 20229161 - 20229075
Alignment:
Q  119 tttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    |||||||||| ||||||||||||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  20229161 tttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 20229075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 21714569 - 21714623
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  21714569 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 21714623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 33797680 - 33797722
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  33797680 atcacattataatcacttaacatttcacaatagcttcacagtt 33797722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 13213027 - 13212974
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  13213027 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 13212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 21022775 - 21022839
Alignment:
Q  152 caagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    |||||||||| || ||||| ||| ||||| |||||||| |||| || ||||||||||||||||||    
T  21022775 caagtaatgcaattaatcattaattcacattataatcagcttaacagttcataatagcttcacag 21022839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 21342090 - 21342146
Alignment:
Q  18 tggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||| ||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  21342090 tggacttcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 21342146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 27250823 - 27250787
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  27250823 gactcatgcagcttagttaaataacaatagcaacata 27250787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 36134074 - 36133879
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| ||    
T  36134074 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatccattcatctt 36133975  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||| |||||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36133974 caacaacttcctgatcattcaataataactcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagcttcacagtt 36133879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 9556551 - 9556716
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  9556551 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaatacta 9556650  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  9556651 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 9556716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 17810293 - 17810458
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17810293 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 17810392  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| |||||| |||||||  |||||||||||    
T  17810393 attcaagtaatgcaatcaatcaataaatcacattataaacacttaacatttcaatatagcttcaca 17810458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 4561419 - 4561254
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||||| | ||||||||||||||    
T  4561419 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaatttattttcaacaacttcctaatcattcaataata 4561320  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  4561319 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 4561254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 14757507 - 14757342
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |||||||||||||||||||||||||| | ||||||||||||||    
T  14757507 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacaacttaatatcaattcattttcaacaacttcctaatcattcaataata 14757408  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  14757407 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 14757342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 5757023 - 5756858
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | ||||||| || |||| ||||||||||||||||||||| ||||||||||||||||    
T  5757023 actcatgtaacttagttaaataacaataacagcataatcagattatatcaacaacttaataccaattcattttcaacaacttcctgatcattcaataata 5756924  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  5756923 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 5756858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 27534047 - 27534212
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||| |||||||||||||     
T  27534047 actcatgcaacttagtttaataacaataacagcataatcggatcatatcaacagcttaatatcaattcattttcaataacttcttaatcattcaataatg 27534146  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| |||||  |||||||||||||  |||||||||||    
T  27534147 attcaagtaatgcaatcaatcaataaatcacattataacaacttagcatttcaatatagcttcaca 27534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 187
Target Start/End: Complemental strand, 22634516 - 22634369
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  22634516 cttattcagacgcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttgatcat 22634417  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    ||||||||||| ||||||||||  | ||||| ||| ||||| ||||||    
T  22634416 tcaataataattcaagtaatgcatttaatcattaattcacattataat 22634369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 33742399 - 33742563
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  ||| |||||||||| |||||||| | ||||||||||||||||    
T  33742399 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttgataccaattcattt-caacaactccctgatcattcaataata 33742497  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| ||||||||||||||||||  |||| ||||||||||||||  |||||||||||    
T  33742498 attcaagtaatgcaatcaatcaataaatcacataataaacacttagcatttcaatatagcttcaca 33742563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 1951851 - 1951678
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||||||||||||| ||||||||||||||    
T  1951851 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaatttcttgatcattca 1951754  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||||| ||||||| |||| | ||  |||| |||||||  ||||||||| ||||||||||||    
T  1951753 ataataattcaagtaaatgcaatcaatccataatttactttatattcacttaaaatttcataaaagcttcacagtt 1951678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 18222468 - 18222295
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||||||||||||| | ||||||||||||    
T  18222468 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaattccttgatcattca 18222371  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||| | ||||||| |||| ||||  |||| ||||||| ||| |||||| ||||||||||||    
T  18222370 ataataattcaagtaaatacaatcaatccataattcactttatattcacttaacatatcataaaagcttcacagtt 18222295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 16488194 - 16487996
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||  | |||        |  |||||||||||    
T  16488194 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaaaagcagcataacttcataatatcaattc 16488095  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
     ||||||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||||||||| |||||||| |||| || |||||| |||||||||||    
T  16488094 -ttttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacag 16487996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 17152576 - 17152404
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||  |||| |||| ||||||| ||||||||| | ||||||||||||    
T  17152576 attcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaattccttgatcattca 17152480  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||| | ||||||| |||| ||||  |||| ||||||| ||| |||||| | ||||||||||    
T  17152479 ataataattcaagtaaatacaatcaatccataattcactttatattcacttaacatatcataaaatcttcacagtt 17152404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 18228943 - 18228770
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||  ||||  ||| |||||||||| |||||| | ||||||||||||    
T  18228943 attcagactcatgcaacttagttaaataaaaattgcagcataatcaaatcacatca--agcttcataacaattcatttccaacaattccttgatcattca 18228846  T
Q  143 ataataatccaagtaatg-ccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||||| | | ||||||| |||| ||||  |||| ||||||| ||| || ||| ||||||||||||    
T  18228845 ataataattcaagtaaagacaatcaatccataattcactttatattcacttaacatatcgtaaaagcttcacagtt 18228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 43256505 - 43256343
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  43256505 cttattcatactcatgcaacttagttaaataacaattgtagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 43256409  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  43256408 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 43256343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 20157579 - 20157407
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac-----agct---gaatatcaa 113  Q
    ||||||| ||||||| | |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||     | ||    ||||||||    
T  20157579 catcatcgtcttaatcaacttatatagactcatgcaaattagttaaataacaatagcagcataatcagatcacatcaacggtataactttataatatcaa 20157480  T
Q  114 ttcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    |||| |||||||||| ||| ||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  20157479 ttca-tttcaacaacatctagatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 20157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 18236904 - 18237067
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| ||||||| ||||| |||||    
T  18236904 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttaatcat 18237001  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataa 204  Q
    |||| |||||| ||||| ||| | ||||||| |||| ||||   ||||||||||| || |||||||    
T  18237002 tcaacaataattcaagtaaatacaatcaatccataattcacttcataatcacttaacaattcataa 18237067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 13813135 - 13812966
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||         |  |||||||||||    
T  13813135 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagattaccacaacattaaaacttcataatatcaattc 13813036  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  13813035 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 13812966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 26243746 - 26243642
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||  |||| |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  26243746 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 26243649  T
Q  152 caagtaa 158  Q
    |||||||    
T  26243648 caagtaa 26243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 16357068 - 16356906
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||        |  |||||||||||    
T  16357068 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataatttcataatatcaattc 16356969  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    | |||| ||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  16356968 a-tttccacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 16356906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 3412811 - 3412919
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||   | | |||| ||| ||||| |||| || |||||||||||    
T  3412811 cttattcatactcatgcaacttagtttaataacaatagcagcataatcaaatcacatca--ggttaaataacaaatcattctcaataatttcttgatcat 3412908  T
Q  140 tcaataataat 150  Q
    |||| ||||||    
T  3412909 tcaacaataat 3412919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 16243493 - 16243377
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | | |||| ||| ||||| ||||||| |||||||||||    
T  16243493 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgatcat 16243396  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  16243395 tcaacaataattcaagtaa 16243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 12570014 - 12570090
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  12570014 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 12570090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 16348780 - 16348702
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  16348780 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagc 16348702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 28569537 - 28569423
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||||   | |||| ||| ||||| |||| |  |||||||||||    
T  28569537 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaac--ttaaataacaaatcattctcaatagtttcttgatcat 28569440  T
Q  140 tcaataataatccaagt 156  Q
    |||| || ||| |||||    
T  28569439 tcaacaacaattcaagt 28569423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 2014791 - 2014907
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | | |||| ||| |||||  |||||| |||||||||||    
T  2014791 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattcgcaacaatttcttgatcat 2014888  T
Q  140 tcaataataatccaagtaa 158  Q
    || | |||||| |||||||    
T  2014889 tccacaataattcaagtaa 2014907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 14708727 - 14708668
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14708727 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 14708668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 19757682 - 19757578
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  19757682 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 19757585  T
Q  152 caagtaa 158  Q
    |||||||    
T  19757584 caagtaa 19757578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 19782124 - 19782228
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  19782124 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 19782221  T
Q  152 caagtaa 158  Q
    |||||||    
T  19782222 caagtaa 19782228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 217
Target Start/End: Original strand, 23139296 - 23139459
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||  |||| |||| ||| ||||| ||||||| |||||||||| | || ||||||     
T  23139296 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa-ttcttgatcaattaacaataatt 23139392  T
Q  152 caagta-atgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||   || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  23139393 caagtatgggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 23139459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 10712874 - 10712980
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  10712874 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 10712967  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  10712968 tttcaagtaatgc 10712980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 10926644 - 10926750
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  10926644 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 10926737  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  10926738 tttcaagtaatgc 10926750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 189
Target Start/End: Complemental strand, 5339076 - 5338926
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaa---------tatcaattcattttcaacaacttcttgatc 137  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||| |||||||  ||         ||||||||||||| ||||||  |||||||     
T  5339076 agactcatgcatcatagttaaataacaataacagcacaagcagatcacaacaacagcataacttcataattatcaattcattt-caacaaaatcttgatt 5338978  T
Q  138 attcaataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
    |||||||||||   |||||||||| || |||||||||||||||  |||||||    
T  5338977 attcaataatatctcaagtaatgcaattaatcaataaatcacatcataatca 5338926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 15224807 - 15224866
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | || |||||||||||||||||||||| |||||||||||| ||||||||||    
T  15224807 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 15224866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 25555503 - 25555550
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25555503 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 25555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 15093775 - 15093853
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||| ||||| |   ||||||||||||||||||||| |||||||||||||||   |||||||| |||||||    
T  15093775 catcatcttaatcatcttgtattgactcatgcaacttagttaaagaacaatagcagcatagaaagatcacaacaacagc 15093853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 15353402 - 15353348
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  15353402 agactcatgcaacttagttaaataacagcagcaacataatcagatcacagcaaca 15353348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 45938173 - 45938269
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||| ||||||||||||||| | |||||||||||| |||||||||  |||| |||| ||| ||||| ||||||| |||||||||| | || |||||||    
T  45938173 catgcatcttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa-ttcttgatcaattaacaataatc 45938269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11250655 - 11250608
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||    
T  11250655 gactcatgcaacttagttaaataacagcagcaacataatcagatcaca 11250608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 42997543 - 42997484
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||| |||||||||||| | |||||||||||| ||||||||||    
T  42997543 cttattcataatcatgcaactcagttaaataacatttgcagcataatcaaatcacatcaa 42997484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 18602824 - 18602766
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||| ||||||||| | ||||||| |||||||||||| |||||||||    
T  18602824 cttattcatactcatgaaacttagtttagtaacaattgcagcataatcaaatcacatca 18602766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 18609396 - 18609340
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacat 96  Q
    |||||||| ||||||| ||||||||| | ||||||| |||||||||||| |||||||    
T  18609396 cttattcatactcatgaaacttagtttagtaacaattgcagcataatcaaatcacat 18609340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 23843501 - 23843537
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23843501 gactcatgcaacatagttaaataacaatagcagcata 23843537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 6899891 - 6899954
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| || | ||||  | |||||||||| ||||||||||||||||||||| ||||    
T  6899891 acatcatcatcttcatcaacttagaccgactcatgcatcttagttaaataacaatagcaacata 6899954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15121917 - 15121858
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| |||||||   |||||||||||||| ||| |||||||||| |||||||    
T  15121917 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatatcagcata 15121858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 8574985 - 8574935
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||||| ||||  | |||||||||| ||||||||||||||||    
T  8574985 tcatcatcttaattaacttagaccgactcatgcagcttagttaaataacaa 8574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 9530460 - 9530506
Alignment:
Q  53 atgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    ||||||||||||||||| ||| | |||||||||||| ||||||||||    
T  9530460 atgcaacttagttaaatgacatttgcagcataatcaaatcacatcaa 9530506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 18239581 - 18239523
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||||||    
T  18239581 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcagca 18239523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 43256120 - 43256078
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  43256120 atcacattataatcacttaacatttcacaatagcttcacagtt 43256078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 39706409 - 39706356
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  39706409 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 39706356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 13569502 - 13569561
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  13569502 catcatcttgatcatcttatatca-actcatgcaacatagttaaataacaataacagcata 13569561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 19242693 - 19242749
Alignment:
Q  18 tggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||| ||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  19242693 tggacttcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 19242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 12916 - 13093
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  12916 cttattcagactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagcttaatatcaattcatcttcaacaatttcttgatcat 13015  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  13016 tcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagctccacagtt 13093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 19200 - 19377
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  19200 cttattcagactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagcttaatatcaattcatcttcaacaatttcttgatcat 19299  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||||  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  19300 tcaataataattaaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagctccacagtt 19377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 62273 - 62386
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  62273 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--ggttaaataacaactcattctcaatagtttcttgatcat 62370  T
Q  140 tcaataataatccaag 155  Q
    |||| |||||| ||||    
T  62371 tcaacaataattcaag 62386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 18726 - 18549
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| || |||||||||||    
T  18726 cttattcagactcatgcaacttaggtaaataacaatagcagcataatcagatcatatcaacagcttaataacaattcattttcaataatttcttgatcat 18627  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  18626 tcaaaaataattcaagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataaaagcttcacagtt 18549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 134; Significance: 6e-70; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 65613 - 65448
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  65613 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcttgatcattcaataata 65514  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  65513 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 65448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 61697 - 61532
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  61697 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 61598  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  61597 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 61532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 80736 - 80898
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| ||||||||| ||||||||||||  ||| |||||  ||| |||| |||||||||| ||||| |||| ||||||||||||||||    
T  80736 actcatgcaacttagtttaataacaattgcagcataatcaattcatatcaa--gcttaataacaattcattt-caacatcttcctgatcattcaataata 80832  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||| ||||||||||| ||||| ||||||||||||||  | |||||||||    
T  80833 attcaagtaatgcaatcaattaataaatcacattataaacacttagcatttcaatacagcttcaca 80898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 12763 - 12839
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||  ||||||||| |||||    
T  12763 catcatcttaatcatcttatatagactcatgcaacttagttcaataacaataacagcataggcagatcacaacaaca 12839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 80307 - 80366
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  80307 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 80366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 80462 - 80530
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    ||||||||||| |||||| ||||||||||||||||||| | | ||||||||  | ||||| |||||||||    
T  80462 caattcatttt-aacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcaca 80530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 17410434 - 17410601
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||    
T  17410434 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacaacttaatatcaattcatctt 17410533  T
Q  122 caacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
    | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  17410534 cgacaacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatca 17410601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 23535681 - 23535506
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||||    
T  23535681 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattca-tttcaacaatttcttgatcat 23535583  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||||  ||||||||| ||| |||||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  23535582 tcaataataattaaagtaatgcaatctatcaataaatcac-gtataatcacttagcatttcatagaagcttcacagtt 23535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 20295868 - 20296033
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  20295868 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 20295967  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  20295968 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 20296033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 15236865 - 15236700
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  15236865 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaagaata 15236766  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||| ||||||||||| ||||| ||||||||||||||  |||||||||||    
T  15236765 attcaagtaatgcaatcaattaataaatcacattataaacacttagcatttcaatatagcttcaca 15236700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 19472805 - 19472640
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  19472805 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 19472706  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    ||  ||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  19472705 atttaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 19472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 21366781 - 21366584
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca-------gctgaatatcaattca 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||        |   |||||||||||    
T  21366781 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattatacttcatcatatcaattca 21366682  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
     ||||| |||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| |||||||| |||| || ||||||  ||||||||||    
T  21366681 -tttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacag 21366584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 42805436 - 42805609
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||  |||| |||| ||||||||||||||||| | |||||||||| |    
T  42805436 attcagactcatgcaacttggttaaataacatttgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaattccttgatcattta 42805533  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| |||   ||||||| |||| ||||  |||| ||||||| ||| |||||| ||||||||||||    
T  42805534 ataataattcaagtaaataaaatcaatccataattcactttatattcacttaacatatcataaaagcttcacagtt 42805609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 20911263 - 20911101
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  20911263 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 20911167  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  20911166 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 20911101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 24767665 - 24767493
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-----ct---gaatatcaa 113  Q
    ||||||||||||||| |||||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||     ||    ||||||||    
T  24767665 catcatcatcttaatcatcttatatagatttatgcaacttagttaaataacaatagcagcataatcagatcacatcaatagtataactttataatatcaa 24767566  T
Q  114 ttcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    |||| |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  24767565 ttca-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 24767493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 18774219 - 18774393
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||  |||| |||| ||| ||||||||||||| ||||||||||||||    
T  18774219 attcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacaatttcttgatcattca 18774316  T
Q  143 ataataatccaagt-aatgccatcaatcaataa-atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    | |||||| ||||| ||| | ||||||| ||||  ||||   ||||||||| | || ||||||| ||||||||||||    
T  18774317 acaataattcaagtaaatacaatcaatccataatttcacttcataatcactgaacaattcataaaagcttcacagtt 18774393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 26742835 - 26742663
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||||||||||||||||| | |||||||||||| |||||||||   ||| |||| ||| ||||| ||||||| | |||||||||||||    
T  26742835 ttcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggcttaataacaactcattctcaacaattccttgatcattcaa 26742738  T
Q  144 taataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||| | ||| ||| | ||||| | |||| ||||  ||||||||||||  || |||||| ||||||||||||    
T  26742737 taataattcgagtaaatacaatcaaaccataattcactttataatcacttaatatatcataaaagcttcacagtt 26742663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 18355970 - 18356132
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||  || | |||| ||||||| |||||||||| ||||||||||    
T  18355970 cttattcatactcatgcaacttagttaaataacaattgcaacataatcaaatcacatca--agtttaataacaattca-tttcaacaacatcttgatcat 18356066  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  18356067 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 18356132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 18784062 - 18784175
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||  |||| |||| ||| ||||||||||||| ||||| ||||||||    
T  18784062 attcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacaatttctttatcattca 18784159  T
Q  143 ataataatccaagtaa 158  Q
    | |||||| |||||||    
T  18784160 acaataattcaagtaa 18784175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 20232568 - 20232739
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||| ||||||| ||||| ||||||||| |||||||||||| |||||||||  |||| |||| ||||||||| ||||||| || ||||||| ||||    
T  20232568 ttcagacttatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattctcaacaa-ttattgatcaatcaa 20232664  T
Q  144 taataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| ||||| || || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  20232665 caataattcaagtaaaggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 20232739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 24533136 - 24532965
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  24533136 ttcagactcatgcaacatagtttaataacaattgcaacataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 24533040  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||| || ||||||  |||||||||||    
T  24533039 caataattcaagtaagggcaatcaatccataattcacttcataatcacttagtatatcataaaggcttcacagtt 24532965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 26666219 - 26666048
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  26666219 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 26666123  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  26666122 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 26666048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 26937816 - 26937645
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaa 143  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  |||| |||| ||| ||||| ||||||| |||||||||| ||||    
T  26937816 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa-ttcttgatcaatcaa 26937720  T
Q  144 taataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
     |||||| |||||||  || ||||||| |||| ||||   |||||||||||  || ||||||  |||||||||||    
T  26937719 caataattcaagtaagggcaatcaatccataattcacttcataatcacttaatatatcataaaggcttcacagtt 26937645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 21885282 - 21885166
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  21885282 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 21885185  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| || ||| |||||||    
T  21885184 tcaacaacaattcaagtaa 21885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 40723672 - 40723607
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaat 114  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  40723672 actcatgcaacttagtttaataacaatagcagcataatcggatcatatcaacaacttaatatcaat 40723607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 1859093 - 1859017
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  1859093 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 1859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26680604 - 26680652
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26680604 agactcatgcaacttagttaaataacaacagcagcataatcagatcaca 26680652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26952211 - 26952259
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26952211 agactcatgcaacttagttaaataacaacagcagcataatcagatcaca 26952259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 123417 - 123346
Alignment:
Q  30 tcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||| |||||||||   ||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  123417 tcttatttatcttataatgactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 16674177 - 16674281
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  16674177 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 16674274  T
Q  152 caagtaa 158  Q
    |||||||    
T  16674275 caagtaa 16674281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 17718520 - 17718416
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | || ||||||||| |||||||||   | | |||| ||  ||||| ||||||| ||||||||||||||||||||||     
T  17718520 catgcaacttagttaaataacatttgccgcataatcaaatcacatcat--gttcaataacagatcattctcaacaatttcttgatcattcaataataatt 17718423  T
Q  152 caagtaa 158  Q
    |||||||    
T  17718422 caagtaa 17718416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 21340855 - 21340800
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  21340855 ttcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 21340800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 33409253 - 33409357
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||| ||||| ||||||| ||||||||||||||| ||||||     
T  33409253 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaaatcattctcaacaatttcttgatcattcaacaataatt 33409350  T
Q  152 caagtaa 158  Q
    |||||||    
T  33409351 caagtaa 33409357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 20805552 - 20805622
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  |||||||||    
T  20805552 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcaca 20805622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 23451371 - 23451424
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  23451371 gactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 23451424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 10753385 - 10753491
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  10753385 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 10753478  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  10753479 tttcaagtaatgc 10753491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 17517320 - 17517240
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||    
T  17517320 atcaacatcttaatcaacttagactgactcatgcaacttagtttaataacaatagcagcataggcagattacatcaacagc 17517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 20766974 - 20767050
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  || |||||| |||||    
T  20766974 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcaaatcacaacaaca 20767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23458592 - 23458668
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| || ||||||||||||||||| |||||    
T  23458592 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagaagcataatcagatcacaacaaca 23458668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23462853 - 23462929
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| || ||||||||||||||||| |||||    
T  23462853 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagaagcataatcagatcacaacaaca 23462929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23572084 - 23572160
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||||||| |||||||||| |||||||  ||||||||| |||||    
T  23572084 catcatcttaatcatcttatatggactcatgcaacttagttcaataacaataacagcataggcagatcacaacaaca 23572160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 31342169 - 31342217
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31342169 agactcatgcaacttagttaaataacagcagcagcataatcagatcaca 31342217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 10752956 - 10753015
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  10752956 cttattcatactcttgcaacttagttaaataacaattgcagcataattaaatcacatcaa 10753015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 12028659 - 12028612
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12028659 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 12028612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 17919245 - 17919198
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  17919245 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 17919198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 4036232 - 4036290
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  4036232 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 4036290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 24221899 - 24221953
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||| |||||    
T  24221899 agactcatgcaacctagttaaataacagcagcagcataatcagatcacaacaaca 24221953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 25229499 - 25229441
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  25229499 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 25229441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 25293655 - 25293597
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  25293655 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 25293597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23512098 - 23512174
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   ||||||||||  |||||||||||||||||||||||||  |||||| ||||||||    
T  23512098 catcatcttattcatcttataatgactcatgcactttagttaaataacaatagcagcataggcagatcgcatcaaca 23512174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 26172488 - 26172536
Alignment:
Q  51 tcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  26172488 tcattcaacttagttaaataacaattgcagcataatcaaatcacatcaa 26172536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 21873254 - 21873313
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||||| |||||||||    
T  21873254 catcatcttattcatcttatattgactcatgcaacttagttaaataacaaaagcagcata 21873313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 20910759 - 20910718
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagt 216  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  20910759 atcacattataatcacttagcatttcacaatagcttcacagt 20910718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 23201383 - 23201436
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  23201383 gactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 23201436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 23501472 - 23501415
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||||||    
T  23501472 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagca 23501415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 14079149 - 14079208
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||||||||||    
T  14079149 catcatcttaatcatcttatatca-attcatgcaacatagttaaataacaatagcagcata 14079208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 2154776 - 2154721
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||||||||    
T  2154776 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaatagca 2154721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 22032323 - 22032382
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||    
T  22032323 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacata 22032382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 22757148 - 22757195
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||| |||||||||||||||||  |||| |||||||||||||||    
T  22757148 gactcatgtaacttagttaaataacagcagcaacataatcagatcaca 22757195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 31061068 - 31061123
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  31061068 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 31061123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 42245527 - 42245472
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  42245527 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 42245472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 10753111 - 10753204
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||||| |||||| ||||||||||||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  10753111 caattcatttt-aacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 10753204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 18356474 - 18356516
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  18356474 atcacattataatcacttaacatttcacaatagcttcacagtt 18356516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 26704098 - 26704152
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  26704098 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 26704152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 26973831 - 26973885
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  26973831 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 26973885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 21329618 - 21329565
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  21329618 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 21329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 18770118 - 18770042
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||  ||||||||||||| ||||  ||||| ||| |||||    
T  18770118 catcatcttaatcatcttatatcgactcatgcaacttggtcgaataacaatagcaacataggcagattacaacaaca 18770042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 3960 - 3795
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  3960 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctgatcattcaataata 3861  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  3860 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 3795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 123; Significance: 2e-63; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 173304 - 173479
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||| |||||    
T  173304 cttattcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa--gcttaataacaattcattttcaacaatttctttatcat 173401  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  173402 tcaataataattcaagtaatgcaatcaatcaatatatcacaatataatcacttagcatttcataatagcttcaaagtt 173479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 422648 - 422572
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||||||||||||||||||||||||||  ||||||||||| |||||||| |||||    
T  422648 catcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataattagatcacaacaaca 422572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 85742 - 85692
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||| ||||||  | |||||||||| ||||||||||||||||    
T  85742 tcatcatcttaatcatcttagaccgactcatgcagcttagttaaataacaa 85692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 5186 - 5021
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  5186 actcatgcaacttagttaaataacaatagcagcataatcagctcatatcaacaacttaatatcaattcattttcaacaacttcctgatcattcaataata 5087  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  5086 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 5021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 9e-63; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 43251834 - 43251999
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  43251834 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcctaatcattcaataata 43251933  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  43251934 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 43251999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 19278368 - 19278203
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  19278368 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 19278269  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  19278268 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 19278203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 21972670 - 21972505
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  21972670 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 21972571  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  21972570 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 21972505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 21976755 - 21976590
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  21976755 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 21976656  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  21976655 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 21976590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 16231565 - 16231392
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||||||||||||| ||||||||||||||    
T  16231565 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaaattcttgatcattca 16231468  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||||| ||||||| |||| ||||  |||| ||||||| |||||||||| ||||||||||||    
T  16231467 ataataattcaagtaaatgcaatcaatccataattcactttatattcacttaacatttcataaaagcttcacagtt 16231392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 22111904 - 22112037
Alignment:
Q  81 cataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    ||||||||||| | |||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  22111904 cataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcaca 22112003  T
Q  181 ctataatcacttagcatttcataatagcttcaca 214  Q
     ||||| ||||||||||||||  |||||||||||    
T  22112004 ttataaacacttagcatttcaatatagcttcaca 22112037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 22044900 - 22045073
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||| ||||||||||  ||| |||| ||||||||||||||||| |||||||||||||     
T  22044900 attcagactcatgcaacttagtttgataacaattgcagcacaatcaaatcacatcaa--gcttaataacaattcattttcaacaatttcttgatcattcc 22044997  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||||| ||||||| |||| ||||  |||||||||||| ||| |||||| ||||||||||||    
T  22044998 ataataattcaagtaaatgcaatcaatccataattcactttataatcacttaacatctcataaaagcttcacagtt 22045073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 20466157 - 20465957
Alignment:
Q  25 catcatcttaattatcttattca--gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaa--------tatcaat 114  Q
    |||||||||||| |||||||  |  ||||||||||||||||||||||||||||||||| |||  ||||||||| ||||| |  ||        |||||||    
T  20466157 catcatcttaatcatcttatatatagactcatgcaacttagttaaataacaatagcagtataggcagatcacaacaacaacataacttcataatatcaat 20466058  T
Q  115 tcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcac 213  Q
    |||||| ||||||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  20466057 tcattt-caacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcac 20465959  T
Q  214 ag 215  Q
    ||    
T  20465958 ag 20465957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 30643408 - 30643237
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||         |  |||||||||||    
T  30643408 catcatcttaatcatcttgaatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacaacataacttcataatatcaattc 30643309  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
    | |||||||||| ||||||||||||||||||| | |||||||||| || ||||| ||||||| | ||||||||    
T  30643308 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcatattataatca 30643237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 14398201 - 14398039
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||| |||  | |||| |||| ||||||| ||||||||||  |||||||||    
T  14398201 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcgcat--aaagcttaataacaattca-tttcaacaacaacttgatcat 14398105  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  14398104 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 14398039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 21387086 - 21387184
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  21387086 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttgatcat 21387182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 15603111 - 15602971
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattcattttcaacaacttcttgatca 138  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||        |  |||||| ||||| |||||||||| |||||||||    
T  15603111 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacatcaacagcaaaatttcataatatcgattca-tttcaacaacatcttgatca 15603013  T
Q  139 ttcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||||||||| | ||||||||||  | ||||| |||||||||    
T  15603012 ttcaataatatttcaagtaatgcatttaatcattaaatcaca 15602971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 15611563 - 15611423
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattcattttcaacaacttcttgatca 138  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||        |  |||||||||||| |||||||||| |||||||||    
T  15611563 agactcatgcaacttggttaaataacaaaaccagcataatcagatcacatcaacagcaaaatttcataatatcaattca-tttcaacaacatcttgatca 15611465  T
Q  139 ttcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||||||||| | ||||||||||  | ||||| |||||||||    
T  15611464 ttcaataatatttcaagtaatgcatttaatcattaaatcaca 15611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 18619554 - 18619667
Alignment:
Q  105 gaatatcaattcattttcaacaacttcttgatcattcaataataatccaagtaatg-ccatcaatcaataaatcacactataatcacttagcatttcata 203  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||| | | ||||||| |||||||||  |||| ||||||| ||| |||||    
T  18619554 gaatntcaattcattttcagcaatttcttgatcattcaataataattcaagtaaagacaatcaatccataaatcactttatattcacttaacatctcata 18619653  T
Q  204 atagcttcacagtt 217  Q
    | ||||||||||||    
T  18619654 aaagcttcacagtt 18619667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 21383666 - 21383768
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||  |||| |||| ||||||| |||||||||| |||| |||||    
T  21383666 cttattcatactcatgcaacttagttaaataacaattgcaacataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttaatcat 21383762  T
Q  140 tcaata 145  Q
    ||||||    
T  21383763 tcaata 21383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 22028647 - 22028746
Alignment:
Q  119 tttcaacaacttcttgatcattcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||| |||| ||||  |||| ||||||| |||||||||| ||||||||||||    
T  22028647 tttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataattcactttatattcacttaacatttcataaaagcttcacagtt 22028746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 17926822 - 17926660
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaat--------atcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||| ||||||  ||||||| | |||||||  |||        ||||||||    
T  17926822 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagtagcataggcagatcaaaacaacagcataatttcacaatatcaattc 17926723  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    |||| ||||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  17926722 attt-caacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 17926660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 23834188 - 23834362
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||| ||||| ||||||||| ||| |||| ||| |||||||||  |||| |||| ||| ||||| ||||||| |||||| |||||||    
T  23834188 attcagactcatgcaacatagtttaataacaattgcatcatagtcaaatcacatca--agcttaataacaaatcattctcaacaatttcttggtcattca 23834285  T
Q  143 ataataatccaagt-aatgccatcaatcaataaa-tcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    | |||||| ||||| ||| | |||| || ||||| ||||   ||||||||||| || ||||||| || |||||||||    
T  23834286 acaataattcaagtaaatacaatcagtccataaattcacttcataatcacttaacaattcataaaagattcacagtt 23834362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 24755714 - 24755790
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  24755714 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 24755790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 15531914 - 15532018
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||||||||| ||||||| ||||||||||||||| ||||||     
T  15531914 catgcaacttagttaaataacatttgcagcataatcaaatcacaacag--gtttaataacaattcattctcaacaatttcttgatcattcaacaataatt 15532011  T
Q  152 caagtaa 158  Q
    |||||||    
T  15532012 caagtaa 15532018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 16410347 - 16410208
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||        |  |||| ||||||| |||||||||| ||||||||||    
T  16410347 gactcatgcaacttagtgaaataacaatagcagcataggcagatcacaacaacagcataatttcataataccaattca-tttcaacaacatcttgatcat 16410249  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    ||||||||| | ||||||||||  | ||||| |||||||||    
T  16410248 tcaataatatttcaagtaatgcatttaatcattaaatcaca 16410208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 30308846 - 30308671
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| |||||||||| |||||| ||||||||| ||| |||||||| ||| |||||     | |||| ||| |||||  |||||| |||||||||||    
T  30308846 cttattcatactcatgcaaattagtttaataacaattgcaacataatcaaatcccatcagat--ttaataacaaatcattcacaacaatttcttgatcat 30308749  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| |||||| |||||||| | ||||||| |||| ||||   ||||||||||| || ||| ||| ||||||| ||||    
T  30308748 tcaacaataattcaagtaatacaatcaatccataattcacttcataatcacttaacaattcttaaaagcttcagagtt 30308671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 18678221 - 18678141
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  18678221 atcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagc 18678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 15538473 - 15538577
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||||||||| ||||||| ||||||||||||||| |||||      
T  15538473 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaattcattctcaacaatttcttgatcattcaacaataact 15538570  T
Q  152 caagtaa 158  Q
    |||||||    
T  15538571 caagtaa 15538577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 32121759 - 32121814
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32121759 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagc 32121814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 32605223 - 32605339
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||| ||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  32605223 cttattcataatcatgcaacttagttaaataacaattgcagcacaatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 32605320  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| || ||| |||||||    
T  32605321 tcaacaacaattcaagtaa 32605339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 22010769 - 22010716
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  22010769 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaac 22010716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 23847096 - 23846992
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-ctgaatatcaattcattttcaacaacttcttgatcattcaataataat 150  Q
    |||||||||||||||||||||| | |||||||||||| ||||   ||||||  | |||| ||| ||||| ||||||| ||||||||||||||| ||||||    
T  23847096 catgcaacttagttaaataacatttgcagcataatcaaatca---caacagatttaataacaaatcattctcaacaatttcttgatcattcaacaataat 23847000  T
Q  151 ccaagtaa 158  Q
     |||||||    
T  23846999 tcaagtaa 23846992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 39095018 - 39094965
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  39095018 gactcatgcaacttagttaaataacaaaagcagcatattcagatcacaacaaca 39094965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 377271 - 377347
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  | ||||||||||| |||||||||||||||||||||| || ||||||||| |||||    
T  377271 catcatcttaatcatcttgtatatactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaaca 377347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 16861441 - 16861365
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||  |||||||||||| |||||||||||||||||||| |||||    
T  16861441 catcatcttattcatcttataatgactcatgcaactcggttaaataacaaaagcagcataatcagatcacaacaaca 16861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 17055472 - 17055412
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| || ||||||||    
T  17055472 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaataacatcaac 17055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 18862730 - 18862624
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  18862730 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 18862637  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  18862636 tttcaagtaatgc 18862624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 21828099 - 21827993
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  21828099 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 21828006  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  21828005 tttcaagtaatgc 21827993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20856518 - 20856472
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20856518 gactcatgcaacttagttaaataacaa-agcagcataatcagatcaca 20856472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 32598691 - 32598750
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  32598691 cttattcataatcatgcaacttagttaaataacaattgcagcacaatcaaatcacatcaa 32598750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 23776952 - 23776882
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||| |||||||||||  |||||||||    
T  23776952 catcatcttattcatcttatattgactcatgcaacttagttaaataactatagcagcataggcagatcaca 23776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 16184720 - 16184796
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||| |||||||| || |||||| |||||||||||||||| || |||||| |||||    
T  16184720 catcatcttaatcatcttatatagaatcatgcaagttggttaaacaacaatagcagcataagcatatcacaacaaca 16184796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17354060 - 17353984
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  17354060 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 17353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 17828663 - 17828567
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||  |||| |||| ||| ||||| ||||||| |||||||||| | || |||||||    
T  17828663 catgcaacttagttaattaacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa-ttcttgatcaattaacaataatc 17828567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21162175 - 21162099
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||| |||| |||||||  ||||||||| |||||    
T  21162175 catcatcttattcatcttatattgactcatgcaacttagttaaataataataacagcataggcagatcacaacaaca 21162099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21168848 - 21168772
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||| |||| |||||||  ||||||||| |||||    
T  21168848 catcatcttattcatcttatattgactcatgcaacttagttaaataataataacagcataggcagatcacaacaaca 21168772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 21410971 - 21411077
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  21410971 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 21411064  T
Q  149 atccaagtaatgc 161  Q
     | ||| ||||||    
T  21411065 tttcaaataatgc 21411077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 21805463 - 21805569
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  21805463 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 21805556  T
Q  149 atccaagtaatgc 161  Q
     | ||| ||||||    
T  21805557 tttcaaataatgc 21805569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 19259685 - 19259632
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||||    
T  19259685 gactcatgcaacttggttaaataacaatagtagcataagcagttcacaacaaca 19259632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 20856448 - 20856343
Alignment:
Q  111 caattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagct 209  Q
    |||||||||||||||||| ||| | | |||||| |||||| ||||||||||  | ||||| ||||||||| || || || ||||||| ||||||| || |    
T  20856448 caattcattttcaacaacatctaggttattcaagaataattcaagtaatgcatttaatcattaaatcacattacaaacagcttagcaattcataacaggt 20856349  T
Q  210 tcacag 215  Q
    ||||||    
T  20856348 tcacag 20856343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 23648554 - 23648633
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||| ||||||||| | ||||  | |||||||||||||||||||| ||||||||||| ||||  ||||| ||| |||||    
T  23648554 catcaacatcttaatcaacttagactgactcatgcaacttagttaattaacaatagcaacataggcagattacaacaaca 23648633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 24445587 - 24445541
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||||||||||||||||| |  ||||||||||| |||||||||    
T  24445587 catgcaacttagttaaataacatttacagcataatcaaatcacatca 24445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 6520368 - 6520421
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  6520368 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 6520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 6759255 - 6759316
Alignment:
Q  18 tggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||||||| || | ||||  | |||||||||| |||||||||||||||| ||||    
T  6759255 tggacatcatcatcttcatcaacttagaccgactcatgcagcttagttaaataacaacagca 6759316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 19983119 - 19983152
Alignment:
Q  51 tcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| ||||||||||||||||||||||||    
T  19983119 tcatgcaacatagttaaataacaatagcagcata 19983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 38855372 - 38855319
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  38855372 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 38855319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 19259564 - 19259500
Alignment:
Q  152 caagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    |||||||||  || ||||| ||||||||| |||||||| |||| || ||||||||||||||||||    
T  19259564 caagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataatagcttcacag 19259500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 58804 - 58639
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  58804 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttcctgatcattcaataata 58705  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  58704 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 58639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 228466 - 228290
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| |||| ||||||||||||||| | |||||||||||    
T  228466 cttattcagactcatgcaacttagttaaataacaattgcagcataatcagatcacatca--agcttaataacaattcattttcaactatttcttgatcat 228369  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||||||||||||||||| | ||||||||||    
T  228368 tcaataataattcaagtaaatgcaatcaatcaataaatcactatataatcacttagcatttcataaaaacttcacagtt 228290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 2766 - 2593
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||    
T  2766 cttattcagactcatgcaacttagttaattaacaattgcagcataatcagatcacatcaacagcttaataacaattca-tttcaacaatttcttgatcat 2668  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    ||||||| ||| |||||||| | ||||||||||| |||||| ||||||||||||||| ||||||| |||||||||    
T  2667 tcaataacaattcaagtaatccaatcaatcaatatatcacaatataatcacttagcagttcataaaagcttcaca 2593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 12443 - 12608
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||   |||||| |||||||    
T  12443 actcatgtaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcccaatcatttaataata 12542  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12543 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 12608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 114; Significance: 5e-58; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 36027 - 35863
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||| |||| |||||||||| ||||||||||||||||    
T  36027 actcatgcaacttagttaaataacaatagcagcataattagatcatatcaacagcttaatatcaattaattt-caacaacttcctgatcattcaataata 35929  T
Q  149 atccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    || |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  35928 attcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 35863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 6957 - 7133
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||  |||||||||| ||||| ||||||||| |||||||||||| |||||||||  || | |||| ||| |||||  || |||||||||||||||    
T  6957 cttattcatgctcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agtttaataacaaatcattcacagcaacttcttgatcat 7054  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| |||||| ||||| ||| | ||||||| |||| ||||   |||||||| || || ||||||| ||||||| ||||    
T  7055 tcaacaataattcaagtaaatacaatcaatccataattcacttcataatcacataacaattcataaaagcttcagagtt 7133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 11395 - 11336
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||| |||||||||||| | ||||||| |||| ||||||||||    
T  11395 cttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatcacatcaa 11336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 13568 - 13404
Alignment:
Q  53 atgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatcc 152  Q
    |||||||| |||||| |||||||| ||| |||||||||||||||||||| || |||||||||  || |||||||||||||||||||||||||||||||      
T  13568 atgcaactcagttaattaacaataacagaataatcagatcacatcaacaacttaatatcaatcgatcttcaacaacttcttgatcattcaataataatta 13469  T
Q  153 aagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  13468 aagtaatgcaatcaatcaataaatcacattataatcacttagcatttcataatagctacacagtt 13404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 20110 - 19934
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||  |||| |||| ||||||||||||||||| |||||||||||    
T  20110 cttattcagattcatgcaacttagtttaataacaattgcaacataatcagatcacatca--agcttaataacaattcattttcaacaatttcttgatcat 20013  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||| | |||||||| ||||||||||||    
T  20012 tcaataataattcaagtaaatgcaatcaatcaataaatcacattataatcacttaacgtttcataaaagcttcacagtt 19934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 3620 - 3447
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||  |||| |||| ||||||||||||||||| ||||||||||||||    
T  3620 attcagactcatgcaacttagttaaataacaattgcagtataatcaaatcacatca--agcttaataacaattcattttcaacaatttcttgatcattca 3523  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| ||| ||||| ||||| ||||||| |||| |||| ||||| ||||||| |||||||||| ||||||||||||    
T  3522 ataacaattcaagtaaatgcaatcaatccataattcactctatattcacttaacatttcataaaagcttcacagtt 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 159 - 358
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattc 116  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||         |  |||||||||||    
T  159 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacaacataacttcataatatcaattc 258  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    |||||||||||| ||||||||||||||||||| | |||||||||| || | ||| ||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  259 attttcaacaacatcttgatcattcaataatatttcaagtaatgcaattagtcattaaatcacattataatcaacttaacagttcataacagcttcacag 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 4430 - 4630
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaat--------atcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||        ||||||||    
T  4430 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatggcagcataatcagatcacaacaacagcataatttcataatatcaattc 4529  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    |||| ||||||| |||||||||||| |||||| | |||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  4530 attt-caacaacatcttgatcattcgataatatttcaagtaatgcaattaatcaataaatcacattataatcaacttagcatttcataatagtttcacag 4628  T
Q  216 tt 217  Q
    ||    
T  4629 tt 4630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 471 - 578
Alignment:
Q  49 actcatgcaactt-agttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataat 147  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| ||||||||||||||||||    
T  471 actcatgcaactttagttaaataacaatagcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataat 564  T
Q  148 aatccaagtaatgc 161  Q
    | | ||||||||||    
T  565 atttcaagtaatgc 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 9759 - 9582
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttc-aacaacttcttgatca 138  Q
    |||||| ||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||  ||| |||| ||||||||||   ||||| ||||||||||    
T  9759 cttatttagactcatgcaacatagttaattaacaattgcagcgtaatcagatcacatcaa--gcttaataacaattcatttaataacaatttcttgatca 9662  T
Q  139 ttcaataataatccaagtaa-tgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||    
T  9661 ttcaataataattcaagtaaatgcgatcaatcaataaatcacattataatcacttaaaatttcataaaagcttcacagtt 9582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 6425 - 6227
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaa--------tatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||        |||||||||    
T  6425 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacatcataacttcataatatcaattc 6326  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    |||| ||||||||||||||||||||||||||| | |||||||||| || ||| | ||||||||| ||||| | ||||| |||||||||||||||||||||    
T  6325 attt-caacaacttcttgatcattcaataatatttcaagtaatgcaattaataattaaatcacaatataaacaacttaacatttcataatagcttcacag 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 18450 - 18277
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||||||||||||| | ||||||||||||    
T  18450 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaattccttgatcattca 18353  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||| ||||| ||| | ||||||| |||| ||||  |||  ||||||| ||| |||||| ||||||||||||    
T  18352 ataataattcaagtaaatacaatcaatccataattcactttattttcacttaacatatcataaaagcttcacagtt 18277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 17228 - 17056
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        |  |||||||||||    
T  17228 catcatcttaatcatcttgtatagactcatggaacttagttaaataacaatagcagcataatcagatcacatcaacagcataacttcataatatcaattc 17129  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca 189  Q
    |||| ||||||| |||||| |||||||||||| | |||||||||| || ||||| ||||||||| ||||||||    
T  17128 atttccaacaacatcttgaacattcaataatatttcaagtaatgcaattaatcattaaatcacattataatca 17056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 393 - 591
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| || |||        |  |||||||||||    
T  393 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacagcagcataacttcataatatcaattc 492  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
     |||||||| || ||||||||||||||||||| | ||||||||||  | ||||| ||||||||| |||||||| |||| || |||||| |||||||||||    
T  493 -ttttcaacgacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacag 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 10589 - 10501
Alignment:
Q  129 ttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  10589 ttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcacttagtatttcataatagcttcacagtt 10501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 69794 - 69871
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  69794 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 69871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 5608 - 5781
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------ctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||       |  ||||||||||||||||||||||| ||||||||||    
T  5608 agactcatgcaacttagttaaataacagtagcagcataatcagatcacaacaacagcatagttcataatatcaattcattttcaacaacatcttgatcat 5707  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttca 212  Q
    |||||||||   |||||||||| || | ||| | ||||||| |||||||| |||| || ||||||| |||||||    
T  5708 tcaataatatctcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttca 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 6803 - 6976
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------ctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||       |  ||||||||||||||||||||||| ||||||||||    
T  6803 agactcatgcaacttagttaaataacagtagcagcataatcagatcacaacaacagcatagttcataatatcaattcattttcaacaacatcttgatcat 6902  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttca 212  Q
    |||||||||   |||||||||| || | ||| | ||||||| |||||||| |||| || ||||||| |||||||    
T  6903 tcaataatatctcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttca 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 1494 - 1691
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac-----agctga--atatcaattca 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||     |  | |  |||||||||||    
T  1494 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaactttatacttcatcatatcaattca 1593  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
     ||||| |||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| |||||||| |||| || ||||||  ||||||||||    
T  1594 -tttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacag 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 42627 - 42820
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca------gctgaatatcaattcat 118  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |  |||||||||||||    
T  42627 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattaacttcataatatcaattcat 42726  T
Q  119 tttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    ||    |||| ||||||||||||||||||| | ||||||||||  | ||||| ||||||||| || ||||| |||| || ||||||| ||||||||||    
T  42727 tt----caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattagaatcagcttaacagttcataacagcttcacag 42820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 25059 - 24885
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttc-ttgatcattc 141  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||| |||||||||  |||| |||| |||  ||||||||| || | | ||||||||||    
T  25059 attcagactcatgcaactcagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaacacattttcaataattcctttgatcattc 24962  T
Q  142 aataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    ||||||||| ||||| ||||| ||||||| |||| ||||  |||||||||||| |||||| ||| ||||||||||||    
T  24961 aataataattcaagtaaatgcaatcaatccataattcactttataatcacttaacatttcctaaaagcttcacagtt 24885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 189462 - 189356
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  189462 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 189369  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  189368 tttcaagtaatgc 189356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 15087 - 15284
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca-------acagctgaatatcaattca 117  Q
    |||||||||||| ||||| |  | |||||||||||||||||||||||||||| |||||||||||||||||| ||       ||  |  ||||||||||||    
T  15087 catcatcttaatcatcttgtatacactcatgcaacttagttaaataacaataacagcataatcagatcacaacacagcataacttcataatatcaattca 15186  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    ||| ||||||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||| ||||||| ||||| | ||| |||| ||||||||||    
T  15187 ttt-caacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaactttttataacagcttcacag 15284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 10162 - 9990
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-----ct---gaatatcaa 113  Q
    ||||||||||||||| |||||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||     ||    ||||||||    
T  10162 catcatcatcttaatcatcttatatagatttatgcaacttagttaaataacaatagcagcataatcagatcacatcaatagtataactttataatatcaa 10063  T
Q  114 ttcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    |||| |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  10062 ttca-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 46820 - 46645
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaa--------tatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||| ||| |||  ||        ||||||||||||| || |||| ||||||||||    
T  46820 gactcatgcaacttagttacataacaatagcagcataggcagatcacaacaatagcataacttcataatatcaattcatttcca-caacatcttgatcat 46722  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcacag 215  Q
    ||||||||| | |||||||||| || ||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  46721 tcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacag 46645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 18774 - 18574
Alignment:
Q  25 catcatcttaattatcttattca--gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaat 114  Q
    |||||||||||| |||||||  |  |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||        |  |||||||||    
T  18774 catcatcttaatcatcttatatatagactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagaataacttcataatatcaat 18675  T
Q  115 tcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataatagcttcac 213  Q
    || ||| ||||||| ||||||||||||||||||| | |||||||||  || ||||| ||||||||| ||||||| || || |||||||||| ||||||||    
T  18674 tcgttt-caacaacatcttgatcattcaataatatttcaagtaatggaattaatcattaaatcacattataatcaacataccatttcataacagcttcac 18576  T
Q  214 ag 215  Q
    ||    
T  18575 ag 18574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 9513 - 9674
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------ctgaatatcaattca 117  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||       |  ||||||||||||    
T  9513 catcatcttattcatcttataatgactcatgcaacttagttaaataacaataacaacataatcagatcacatcaacagcataactcataatatcaattca 9612  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
     |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  9613 -tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 9674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 1830 - 1992
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||        |  |||||||||||    
T  1830 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatggcagcataggcagatcacaacaacagcataatttcataatatcaattc 1929  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||  | ||||| |||||||||    
T  1930 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcaca 1992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 6693 - 6855
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||| |||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  6693 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatctcatca--agcttaataacaattca-tttcaacaacatcttgatcat 6789  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    || |||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  6790 tctataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 30897 - 31059
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||| ||| |||||  |||| |||| ||||||| |||||||||| ||||||||||    
T  30897 cttattcatactcatgcaacttagttaaataacaattacagcataatcaaatctcatca--agcttaataacaattca-tttcaacaacatcttgatcat 30993  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | | ||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  30994 tcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 31059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 73883 - 73725
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca-------gctgaatatcaattca 117  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||        |   |||||||||||    
T  73883 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattatacttcatcatatcaattca 73784  T
Q  118 ttttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatc 177  Q
     ||||| |||| ||||||||||||||||||| | |||||||||| || ||||| ||||||    
T  73783 -tttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatc 73725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 1014 - 928
Alignment:
Q  128 cttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcaca 214  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  1014 cttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataaacacttagcatttcaatatagcttcaca 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 1 - 118
Alignment:
Q  101 agctgaatatcaattcattttcaacaacttcttgatcattcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcattt 199  Q
    |||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||||| ||||| ||||||| |||| ||||  |||| ||||||| |||||    
T  1 agcttaataacaattcattctcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataattcactttatattcacttaacattt 100  T
Q  200 cataatagcttcacagtt 217  Q
    ||||| ||||||||||||    
T  101 cataaaagcttcacagtt 118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 2913 - 3074
Alignment:
Q  33 taattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac-----agct---gaatatcaattcattttcaa 124  Q
    |||| |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||     | ||    |||||||||| | ||||||    
T  2913 taataatcttatatagacttatgcaacttagttaaataacaatagcagcataatcagatcacatcaacaatataactttataatatcaatt-aatttcaa 3011  T
Q  125 caacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataat 187  Q
    |||| ||||||||||||||||||| | ||||||||||  | ||||| ||| ||||| ||||||    
T  3012 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 3074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 289 - 365
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  289 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaaca 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 20557 - 20395
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||| ||||||| ||||| |||| ||||||| ||    
T  20557 cttattcatattcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcatcaacatcttgattat 20461  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    ||||||||| | |  |||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  20460 tcaataatatttcgtgtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 20395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 207942 - 207768
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattcattttc-aacaactt 130  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||| ||||||||        |  ||||||||||||||||| ||||||      
T  207942 cttattcatattcatgcaacttagttaaataacaattgcagcataatcatatcatatcaacagtataacttcataatatcaattcattttcaaacaacaa 207843  T
Q  131 cttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatc-acttagcatttcataa 204  Q
    |||||||||||||||||| | ||||||||||  | ||||| ||||||||| || || | |||||||| |||||||    
T  207842 cttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 207768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 23232 - 23405
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattca 142  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||||| |||||||||  |||| |||| ||| ||||| ||||||| |||||| |||||||    
T  23232 attcagactcatgaaacatagtttaataataattgcagcttaatcaaatcacatca--agcttaataacaaatcattctcaacaatttcttggtcattca 23329  T
Q  143 ataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    | |||||| ||||| ||| | ||||||| |||| ||||   ||||||||||| || ||||||| ||||||| ||||    
T  23330 acaataattcaagtaaatacaatcaatccataattcacttcataatcacttaacaattcataaaagcttcatagtt 23405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 6350 - 6174
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    ||||||||  |||||||||| ||||| ||||||||| |||||||||||| |||||||||  || | |||| ||| |||||  || |||||||||||||||    
T  6350 cttattcatgctcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agtttaataacaaatcattcacagcaacttcttgatcat 6253  T
Q  140 tcaataataatccaagt-aatgccatcaatcaataaatcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||| |||||| ||||| ||| | ||||||| |||| ||||   |||||||| || || ||||||| ||||||| ||||    
T  6252 tcaacaataattcaagtaaatacaatcaatccataattcacttcataatcacataacaattcataaaagcttcagagtt 6174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1912 - 1971
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||| |||||||||||| | ||||||| |||| ||||||||||    
T  1912 cttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatcacatcaa 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 897 - 1040
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag--------ctgaatatcaattc 116  Q
    |||||||||| | |||||||   |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||        |  |||||||||||    
T  897 catcatcttattcatcttataatgactcatgcaacttagttcaataacaatagcagcataggcagatcacaacaacagcataatttcataatatcaattc 996  T
Q  117 attttcaacaacttcttgatcattcaataataatccaagtaatgc 161  Q
    | |||||||||| ||||||||||||||||||| | ||||||||||    
T  997 a-tttcaacaacatcttgatcattcaataatatttcaagtaatgc 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 9916 - 10032
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | | |||| ||| ||||| ||||||| |||||||||||    
T  9916 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgatcat 10013  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  10014 tcaacaataattcaagtaa 10032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 4551 - 4587
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||||||||||||||||| | |||||||    
T  4551 gactcatgcaacttagttaaataacaacaacagcata 4587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 2178 - 2125
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2178 gactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 1584 - 1408
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca--------gctgaatatcaattcattttcaacaacttcttgatca 138  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||         |  || | ||||||| |||||||||| |||||||||    
T  1584 agactcatgcaacttagttaaataaccaaagcagcataatcagatcacaacaacattataacttcataacaacaattca-tttcaacaacatcttgatca 1486  T
Q  139 ttcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataatagcttcacag 215  Q
    |||||||||| | |||||||||| || | ||  ||| ||||| |||||||| |||| || ||||||| ||||||||||    
T  1485 ttcaataatatttcaagtaatgcaattattcgttaagtcacattataatcagcttaacaattcataacagcttcacag 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 14203 - 14127
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  14203 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 14127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 38596 - 38520
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  38596 catcatcttaatcatcttatattgactcatgcaacttagttaaataacaatagcagcatagacagatcacaacaaca 38520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 18367 - 18483
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| || |||||||||||||||||||||| | ||||||||| || |||||||||   | | |||| ||| ||||| ||||||| |||||||||||    
T  18367 cttattcatacacatgcaacttagttaaataacatttgcagcataaacaaatcacatca--ggtttaataacaaatcattctcaacaatttcttgatcat 18464  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  18465 tcaacaataattcaagtaa 18483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 6093 - 5977
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||||   | | |||| ||| ||||| |||| |  |||||||||||    
T  6093 cttattcatactcatgcaacttagtttaataacaattgcagcataatcaaatcacatca--ggttaaataacaaatcattctcaatagtttcttgatcat 5996  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| |||||| |||||||    
T  5995 tcaacaataattcaagtaa 5977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 4921 - 4842
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagct 104  Q
    |||||||||||| |||||||   |||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||    
T  4921 catcatcttaatcatcttatattgactcatgcaacttagttaaataataatagcagcataggcagatcacaacaacagct 4842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 77264 - 77148
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  77264 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 77167  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| || ||| |||||||    
T  77166 tcaacaacaattcaagtaa 77148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 18236 - 18295
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||| ||||||| ||||||||||||||||    
T  18236 catcatcttgatcatcttatatcgactcatgcaacatagttaattaacaatagcagcata 18295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 63878 - 63982
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | | |||| ||||||||| ||||||| ||||||||||||||| ||||||     
T  63878 catgcaacttagttaaataacatttgcagcataatcaaatcacaacag--gtttaataacaattcattctcaacaatttcttgatcattcaacaataatt 63975  T
Q  152 caagtaa 158  Q
    |||||||    
T  63976 caagtaa 63982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 35036 - 34960
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| || ||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  35036 catcatcttaatcattttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 34960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 44081 - 44159
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  44081 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagc 44159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 21596 - 21488
Alignment:
Q  106 aatatcaattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataa 204  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| | |||||||| | || ||||| ||||||||| |||||||| |||| || ||||||     
T  21596 aatatcaattcattt-caacaacatcttgatcattcaataatatttcaagtaatacaattaatcattaaatcacattataatcagcttaacagttcatag 21498  T
Q  205 tagcttcaca 214  Q
     |||||||||    
T  21497 cagcttcaca 21488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 80869 - 80810
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  80869 cttattcatactcttgcaacttagttaaataacaattgcagcataattaaatcacatcaa 80810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 6095 - 6171
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||  ||||||||| |||||    
T  6095 catcatcttaatcatcttatattgactcatgcaacttggttaaataacaatagcagcataggcagatcacaacaaca 6171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 7471 - 7547
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  7471 catcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacagcaaca 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 8e-17; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 71083 - 71180
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattc 141  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||       |||| |||| ||||||| |||||||||| ||||||||||||    
T  71083 tattcatactcatgcaacttagttaaataacaattgcagcataatca-atca-------agcttaataacaattca-tttcaacaacatcttgatcattc 71173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 414167 - 414091
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  414167 catcatcttaatcatcatgtatagacgcatgcaacttagttaaataacaacagcagcataatcagatcacaacaaca 414091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 139736 - 139783
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  139736 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 139783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 71460 - 71502
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  71460 atcacattataatcacttaacatttcacaatagcttcacagtt 71502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 9347 - 9406
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  9347 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 9406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 2832 - 2907
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||| ||||| |  ||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  2832 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaac 2907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 6498 - 6573
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||| ||||| |  ||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  6498 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaac 6573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 1889 - 2005
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||| ||||| |||||||||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  1889 cttattcataatcatgcaacttagttaaatcacaattgcagcataatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 1986  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| || ||| |||||||    
T  1987 tcaacaacaattcaagtaa 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 30859 - 30783
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||| ||||||| |||||    
T  30859 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcggatcacaacaaca 30783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 35605 - 35552
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  35605 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 35552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 19826 - 19773
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  19826 gactcatgcaacttagttaaataacaaaagcagcatattcagatcacaacaaca 19773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 15304 - 15251
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||| |||||    
T  15304 gactcatgcaacttagttaaataacaaaagcatcatattcagatcacaacaaca 15251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 193070 - 193034
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||||||||||| |||||| |||||||||    
T  193070 gactcatgcaacttagttaattaacaacagcagcata 193034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 19317 - 19210
Alignment:
Q  108 tatcaattcattttcaacaacttcttgatcattcaataataatccaagtaatgccatcaatcaataaatcacactataatca-cttagcatttcataata 206  Q
    ||||||||||||| ||||||| ||||||| |||||||||||   |||||||||| || |||||||||||||||  ||||||| ||||  | ||||||| |    
T  19317 tatcaattcattt-caacaacatcttgattattcaataatatctcaagtaatgcaattaatcaataaatcacatcataatcagcttaatagttcataaca 19219  T
Q  207 gcttcacag 215  Q
    |||||||||    
T  19218 gcttcacag 19210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 11586 - 11480
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  11586 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 11493  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  11492 tttcaagtaatgc 11480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21920 - 21844
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  21920 catcatcttaatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 21844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 29812 - 29736
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  29812 catcatcttaatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 29736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 14172 - 14066
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataata 148  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  |||| |||| ||||||||||    |||| |||||||||||||||||||    
T  14172 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt----caacatcttgatcattcaataata 14079  T
Q  149 atccaagtaatgc 161  Q
     | ||||||||||    
T  14078 tttcaagtaatgc 14066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 8512 - 8613
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| ||| |||||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  8512 cttattcataatcatgcaacttagttaaataacaattgcaacataatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 8609  T
Q  140 tcaa 143  Q
    ||||    
T  8610 tcaa 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 15656 - 15757
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | ||||||||||||||||||||||||| ||| |||||||| |||||||||  || | |||| ||| ||||| |||| |  |||||||||||    
T  15656 cttattcataatcatgcaacttagttaaataacaattgcaacataatcaaatcacatca--agttaaataacaaatcattctcaatagtttcttgatcat 15753  T
Q  140 tcaa 143  Q
    ||||    
T  15754 tcaa 15757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 14664 - 14740
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||    
T  14664 catcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 14740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23679 - 23755
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||    
T  23679 catcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 23755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 39103 - 39179
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||    
T  39103 catcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 39179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 8583 - 8630
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  8583 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 8630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 6508 - 6369
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaat--------atcaattcattttcaacaacttcttgatcat 139  Q
    |||||||||||| ||||||||||||||||||||||||   |||||||| ||| |||  |||        |||||||||||| ||||||| ||||||||||    
T  6508 gactcatgcaacatagttaaataacaatagcagcataggaagatcacaacaatagcataatttcataatatcaattcattt-caacaacatcttgatcat 6410  T
Q  140 tcaataataatccaagtaatgccatcaatcaataaatcaca 180  Q
    ||||||||| | | ||||||||  | ||||| |||||||||    
T  6409 tcaataatatttcgagtaatgcatttaatcattaaatcaca 6369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 15350 - 15409
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | | ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15350 cttattcataattatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 15409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 16756 - 16640
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcat 139  Q
    |||||||| | |||||| |||||||||||||||||| |||||||||||| |||| ||||||   | |||| ||| ||||| |||| |  |||||||||||    
T  16756 cttattcataatcatgcgacttagttaaataacaattgcagcataatcaaatcatatcaac--ttaaataacaaatcattctcaatagtttcttgatcat 16659  T
Q  140 tcaataataatccaagtaa 158  Q
    |||| || ||| |||||||    
T  16658 tcaacaacaattcaagtaa 16640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 381 - 439
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | |||||||||||| |||||||||||| |||||||||||| |||||||||    
T  381 cttattcataatcatgcaacttaattaaataacaattgcagcataatcaaatcacatca 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 2531 - 2477
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||    
T  2531 agactcatgcaatttagttaaataacagcagcagcataatcagatcacaacaaca 2477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 10391 - 10337
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||    
T  10391 agactcatgcaatttagttaaataacagcagcagcataatcagatcacaacaaca 10337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 7364 - 7311
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  7364 gactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaaca 7311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 16442 - 16389
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||||||||||||  || |||||| |||||    
T  16442 gactcatgcaacttagttaaataacaatagcagcataggcatatcacaacaaca 16389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 7204 - 7128
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  |||||||||| || |||||||||||||||||||||| |  ||||||||| |||||    
T  7204 catcatcttaatcatcttgtatagactcatgcgacatagttaaataacaatagcagcacaggcagatcacaacaaca 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 1817 - 1868
Alignment:
Q  50 ctcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  1817 ctcatgcaacttagttaaataacaaaggcagcataatcagaccacaacaaca 1868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 2191 - 2238
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  2191 gactcatgcaacttagttaaataacagcagcagcataatcaaatcaca 2238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15796 - 15737
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||||||||    
T  15796 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagcata 15737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 10639 - 10580
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||| ||||    
T  10639 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcaacata 10580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 9445 - 9549
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctgaatatcaattcattttcaacaacttcttgatcattcaataataatc 151  Q
    |||||||||||||||||||||| | |||| ||||| | |||| | ||   | | |||| ||| ||||| ||||||| ||||||||||||||||||||||     
T  9445 catgcaacttagttaaataacatttgcagtataattaaatcataacag--gtttaataacaaatcattctcaacaatttcttgatcattcaataataatt 9542  T
Q  152 caagtaa 158  Q
    |||||||    
T  9543 caagtaa 9549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 4320 - 4273
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||    
T  4320 gactcatgcaacttagttaaataacagcagcaacataatcagatcaca 4273  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 281007 - 280950
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |  |||||||||| || ||||||||||||||||||||||    
T  281007 catcatcttaatcatcttgtatagactcatgcgacatagttaaataacaatagcagca 280950  T

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Target: scaffold1124 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 1881 - 1957
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||  ||||| ||| |||||    
T  1881 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 1957  T

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Target: scaffold0215 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 26828 - 26904
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||| ||||| |||||||   |||||||||| ||| ||||||||||||||||||||||  ||||| ||| |||||    
T  26828 catcattttaatcatcttatatcgactcatgcatcttggttaaataacaatagcagcataggcagattacaacaaca 26904  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 9080 - 9004
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||| ||||||||||||  ||||| ||| |||||    
T  9080 catcatcttgatcatcttatatcgactcatgcaacttggttaaataataatagcagcataggcagattacaacaaca 9004  T

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Target: scaffold0132 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 36331 - 36378
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    ||||||||||| |||||||||| | |||||||||||| ||||||||||    
T  36331 catgcaacttaattaaataacatttgcagcataatcaaatcacatcaa 36378  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 15376 - 15334
Alignment:
Q  175 atcacactataatcacttagcatttcataatagcttcacagtt 217  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  15376 atcacattataatcacttatcatttcacaatagcttcacagtt 15334  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 48550 - 48500
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||  ||||||||||||||||||||||  ||||||||| ||||||    
T  48550 catgcaactaggttaaataacaatagcagcatagacagatcacaacaacag 48500  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 29091 - 29153
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||| |||||| ||| | |  ||||||||||| ||||||||||||||||||| ||||||    
T  29091 catcatcaacttaatcatcatgtatagactcatgcatcttagttaaataacaatagtagcata 29153  T

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Target: scaffold0574 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 7911 - 7878
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagc 81  Q
    |||||||||||||| |||||||||||||||||||    
T  7911 gactcatgcaacttggttaaataacaatagcagc 7878  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 1155 - 1102
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  1155 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 1102  T

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Target: scaffold0333 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 6611 - 6664
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  6611 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 6664  T

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Target: scaffold0333; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 13991 - 14044
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  13991 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 14044  T

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Target: scaffold0243 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 6244 - 6191
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  6244 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 6191  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 19980 - 20057
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || ||||||| | |||||||||| |||  |||||||||||||| ||||||  ||||| ||| ||||||    
T  19980 catcatcttgatcatcttataccgactcatgcagcttgattaaataacaatagtagcataggcagattacaacaacag 20057  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 15898 - 15845
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  15898 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 15845  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 178921 - 178957
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  178921 gactcatgcagcttggttaaataacaatagcagcata 178957  T

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Target: scaffold0819 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 4214 - 4262
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataac 72  Q
    ||||||||||||| | ||||  | |||||||||||||||||||||||||    
T  4214 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataac 4262  T

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Target: scaffold0185 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 33569 - 33625
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||| || | |||||||||||||||| ||||| || ||||||||| |||||||    
T  33569 agactcatccatcatagttaaataacaataacagcacaagcagatcacaacaacagc 33625  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 9744 - 9804
Alignment:
Q  19 ggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||| ||||||||||||| | ||||  | |||||||||| |||||||||||||||| ||||    
T  9744 ggacttcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagca 9804  T

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Target: scaffold0114 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 7295 - 7371
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||||    |||||||||||||| ||| ||||||||||||| ||||  ||||| ||| |||||    
T  7295 catcatcttaatcatcttaaatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 7371  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 15332 - 15296
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  15332 gactcatgcagcttagttaaataacaatagcaacata 15296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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