View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0215-INSERTION-5 (Length: 619)

Name: NF0215-INSERTION-5
Description: NF0215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0215-INSERTION-5
NF0215-INSERTION-5
[»] chr5 (51 HSPs)
chr5 (114-615)||(37853172-37853676)
chr5 (264-354)||(7756934-7757024)
chr5 (8-54)||(37853763-37853809)
chr5 (264-341)||(37181084-37181160)
chr5 (231-337)||(16127049-16127155)
chr5 (264-365)||(16750262-16750363)
chr5 (266-307)||(27769983-27770024)
chr5 (231-355)||(917141-917265)
chr5 (263-355)||(3599826-3599918)
chr5 (483-531)||(8206087-8206135)
chr5 (503-555)||(19342534-19342586)
chr5 (264-354)||(6645694-6645784)
chr5 (282-356)||(11534948-11535022)
chr5 (230-340)||(14461770-14461880)
chr5 (232-366)||(29686426-29686560)
chr5 (493-550)||(296539-296596)
chr5 (445-530)||(917118-917203)
chr5 (274-355)||(9023401-9023481)
chr5 (260-304)||(22391721-22391765)
chr5 (230-366)||(26675241-26675377)
chr5 (230-366)||(26946849-26946985)
chr5 (284-348)||(33204527-33204590)
chr5 (263-355)||(42525216-42525308)
chr5 (483-550)||(29686467-29686534)
chr5 (294-365)||(30118620-30118691)
chr5 (483-534)||(37853451-37853502)
chr5 (282-356)||(11498008-11498082)
chr5 (282-356)||(11505364-11505438)
chr5 (282-356)||(11512758-11512832)
chr5 (282-356)||(11520134-11520208)
chr5 (282-356)||(11527542-11527616)
chr5 (300-354)||(16125461-16125515)
chr5 (230-340)||(23159027-23159137)
chr5 (293-343)||(28503836-28503886)
chr5 (483-529)||(28561430-28561476)
chr5 (275-337)||(37269097-37269159)
chr5 (289-355)||(37853257-37853323)
chr5 (446-531)||(11505343-11505428)
chr5 (446-531)||(11512737-11512822)
chr5 (446-531)||(11520113-11520198)
chr5 (446-531)||(11527521-11527606)
chr5 (260-317)||(19342537-19342594)
chr5 (484-529)||(42525247-42525292)
chr5 (292-356)||(8206087-8206151)
chr5 (324-356)||(9955355-9955387)
chr5 (483-531)||(22579502-22579550)
chr5 (482-530)||(24444393-24444441)
chr5 (287-355)||(27817224-27817292)
chr5 (179-227)||(37840301-37840349)
chr5 (266-334)||(42420532-42420600)
chr5 (260-340)||(42932813-42932893)
[»] chr4 (83 HSPs)
chr4 (230-356)||(12034380-12034506)
chr4 (270-356)||(32934122-32934208)
chr4 (230-307)||(38932633-38932710)
chr4 (230-346)||(17381282-17381398)
chr4 (273-340)||(7616951-7617018)
chr4 (270-356)||(13834365-13834451)
chr4 (445-531)||(13834387-13834473)
chr4 (446-531)||(8755925-8756010)
chr4 (225-355)||(51150831-51150963)
chr4 (253-341)||(24806492-24806580)
chr4 (452-556)||(32934107-32934211)
chr4 (232-356)||(40317746-40317870)
chr4 (232-356)||(40327820-40327944)
chr4 (260-356)||(46804783-46804879)
chr4 (260-304)||(46805050-46805094)
chr4 (483-534)||(7616951-7617002)
chr4 (263-354)||(8170945-8171036)
chr4 (232-307)||(27146288-27146363)
chr4 (260-307)||(35255494-35255541)
chr4 (260-341)||(971873-971954)
chr4 (230-355)||(1758297-1758422)
chr4 (260-340)||(924811-924891)
chr4 (230-338)||(26499277-26499385)
chr4 (232-356)||(55132519-55132643)
chr4 (445-512)||(17381510-17381577)
chr4 (260-355)||(33361063-33361158)
chr4 (284-355)||(38932800-38932870)
chr4 (251-305)||(20217486-20217540)
chr4 (445-531)||(51150900-51150986)
chr4 (263-356)||(4161653-4161746)
chr4 (230-355)||(4215151-4215275)
chr4 (239-336)||(27298534-27298631)
chr4 (266-307)||(45615636-45615677)
chr4 (483-531)||(8170759-8170807)
chr4 (263-307)||(13834540-13834584)
chr4 (452-508)||(45615751-45615807)
chr4 (232-307)||(51151051-51151127)
chr4 (486-541)||(27395468-27395523)
chr4 (468-539)||(30888505-30888576)
chr4 (281-356)||(32123824-32123898)
chr4 (274-317)||(39331186-39331229)
chr4 (284-343)||(40836892-40836951)
chr4 (232-355)||(42375216-42375339)
chr4 (260-355)||(46805781-46805876)
chr4 (266-308)||(972137-972179)
chr4 (284-354)||(4161867-4161937)
chr4 (273-355)||(6552970-6553051)
chr4 (273-355)||(7616787-7616869)
chr4 (266-343)||(8170732-8170810)
chr4 (273-339)||(8755828-8755893)
chr4 (484-530)||(8755847-8755893)
chr4 (269-315)||(14945388-14945434)
chr4 (326-356)||(24806712-24806742)
chr4 (270-356)||(40407620-40407705)
chr4 (322-356)||(45615766-45615800)
chr4 (230-355)||(46871523-46871646)
chr4 (292-346)||(51003441-51003495)
chr4 (282-356)||(56095070-56095144)
chr4 (260-338)||(56095201-56095279)
chr4 (264-309)||(1758495-1758540)
chr4 (230-307)||(10462829-10462906)
chr4 (483-512)||(11840032-11840061)
chr4 (264-317)||(12922198-12922251)
chr4 (486-531)||(21241791-21241836)
chr4 (230-307)||(30316033-30316110)
chr4 (485-550)||(35255463-35255528)
chr4 (501-550)||(37687252-37687301)
chr4 (486-523)||(45278878-45278915)
chr4 (230-343)||(51234458-51234571)
chr4 (483-531)||(971905-971953)
chr4 (483-531)||(4215165-4215213)
chr4 (222-354)||(11840018-11840150)
chr4 (264-340)||(14810440-14810516)
chr4 (232-307)||(17753258-17753334)
chr4 (273-337)||(26404625-26404689)
chr4 (483-527)||(40317762-40317806)
chr4 (483-527)||(40327836-40327880)
chr4 (286-337)||(42993763-42993815)
chr4 (231-339)||(46433580-46433688)
chr4 (483-531)||(46804815-46804863)
chr4 (284-340)||(46871793-46871848)
chr4 (273-305)||(47097342-47097374)
chr4 (263-307)||(48973434-48973478)
[»] chr8 (38 HSPs)
chr8 (268-355)||(35355290-35355377)
chr8 (251-354)||(7603912-7604015)
chr8 (273-354)||(3093935-3094016)
chr8 (230-307)||(4586748-4586825)
chr8 (484-531)||(6915514-6915561)
chr8 (233-356)||(29911558-29911681)
chr8 (282-356)||(7680992-7681066)
chr8 (230-307)||(41302629-41302706)
chr8 (231-307)||(2987176-2987251)
chr8 (483-531)||(7603953-7604001)
chr8 (266-337)||(18451837-18451908)
chr8 (284-355)||(19793534-19793605)
chr8 (271-337)||(30135695-30135761)
chr8 (293-355)||(44362637-44362699)
chr8 (224-309)||(40680024-40680109)
chr8 (483-550)||(6394074-6394141)
chr8 (483-530)||(9598069-9598116)
chr8 (468-531)||(12125868-12125931)
chr8 (292-338)||(2988120-2988166)
chr8 (270-356)||(3662354-3662440)
chr8 (484-534)||(4971452-4971502)
chr8 (227-308)||(1249090-1249170)
chr8 (275-340)||(1648410-1648475)
chr8 (286-367)||(4971449-4971529)
chr8 (483-528)||(8340125-8340170)
chr8 (232-297)||(8340346-8340411)
chr8 (281-354)||(21145418-21145491)
chr8 (445-531)||(41303109-41303197)
chr8 (445-530)||(44362614-44362699)
chr8 (261-341)||(6394073-6394153)
chr8 (483-534)||(7604155-7604207)
chr8 (260-340)||(7680856-7680936)
chr8 (229-305)||(8982301-8982377)
chr8 (260-304)||(10029007-10029051)
chr8 (483-531)||(18080445-18080493)
chr8 (273-341)||(33590133-33590201)
chr8 (271-356)||(41303131-41303218)
chr8 (231-339)||(42844831-42844939)
[»] chr2 (35 HSPs)
chr2 (224-343)||(6788481-6788600)
chr2 (260-307)||(7165777-7165824)
chr2 (255-355)||(20167392-20167492)
chr2 (285-355)||(43191794-43191864)
chr2 (495-543)||(6686784-6686832)
chr2 (292-356)||(20966198-20966262)
chr2 (483-531)||(20966214-20966262)
chr2 (233-332)||(6686737-6686836)
chr2 (270-356)||(7165601-7165688)
chr2 (268-343)||(34883934-34884009)
chr2 (260-307)||(43503033-43503080)
chr2 (489-531)||(11147849-11147891)
chr2 (484-550)||(13478769-13478835)
chr2 (226-356)||(20167574-20167704)
chr2 (260-306)||(20966044-20966090)
chr2 (266-343)||(19206497-19206574)
chr2 (483-531)||(6788484-6788532)
chr2 (457-555)||(7165599-7165698)
chr2 (260-354)||(23359371-23359466)
chr2 (273-339)||(13478769-13478835)
chr2 (452-530)||(18903136-18903214)
chr2 (260-354)||(18903153-18903247)
chr2 (293-355)||(25765365-25765427)
chr2 (484-530)||(29926707-29926753)
chr2 (273-355)||(35150389-35150470)
chr2 (313-355)||(41746407-41746449)
chr2 (266-308)||(41746538-41746580)
chr2 (266-307)||(9471824-9471865)
chr2 (486-531)||(19206503-19206548)
chr2 (485-550)||(20966057-20966122)
chr2 (274-339)||(23359622-23359687)
chr2 (268-340)||(41444679-41444752)
chr2 (253-337)||(18857990-18858074)
chr2 (264-340)||(21603675-21603751)
chr2 (281-317)||(29488706-29488742)
[»] chr7 (44 HSPs)
chr7 (263-337)||(39608582-39608656)
chr7 (231-355)||(34703628-34703751)
chr7 (230-307)||(8062901-8062978)
chr7 (230-339)||(46720016-46720125)
chr7 (225-355)||(18942730-18942861)
chr7 (276-340)||(8929495-8929559)
chr7 (230-338)||(38838646-38838754)
chr7 (275-355)||(40077648-40077727)
chr7 (483-534)||(8929508-8929559)
chr7 (484-530)||(23457814-23457860)
chr7 (230-335)||(25618160-25618265)
chr7 (489-542)||(29197160-29197213)
chr7 (457-533)||(38838523-38838599)
chr7 (484-531)||(23474567-23474614)
chr7 (483-550)||(25688996-25689063)
chr7 (483-542)||(32996500-32996559)
chr7 (484-530)||(23441514-23441560)
chr7 (265-339)||(23457814-23457888)
chr7 (265-339)||(23474540-23474614)
chr7 (230-340)||(24127152-24127262)
chr7 (273-355)||(40089823-40089905)
chr7 (266-343)||(3117055-3117132)
chr7 (452-513)||(12927651-12927712)
chr7 (232-345)||(30839894-30840007)
chr7 (253-302)||(42336840-42336889)
chr7 (284-352)||(1052432-1052500)
chr7 (240-340)||(25688963-25689063)
chr7 (260-341)||(29196781-29196866)
chr7 (260-307)||(1247526-1247573)
chr7 (445-531)||(8062753-8062837)
chr7 (282-336)||(3116847-3116901)
chr7 (273-339)||(5358248-5358314)
chr7 (293-355)||(5362305-5362367)
chr7 (265-339)||(23441486-23441560)
chr7 (484-530)||(23532906-23532952)
chr7 (284-346)||(30793131-30793193)
chr7 (388-430)||(32996370-32996412)
chr7 (263-345)||(43576461-43576542)
chr7 (483-533)||(46719826-46719876)
chr7 (484-530)||(46720016-46720062)
chr7 (280-354)||(24325386-24325462)
chr7 (284-340)||(5197953-5198009)
chr7 (263-307)||(5362467-5362511)
chr7 (310-354)||(30839790-30839834)
[»] chr6 (35 HSPs)
chr6 (446-531)||(25085046-25085131)
chr6 (224-341)||(21020843-21020960)
chr6 (263-356)||(25085067-25085160)
chr6 (273-355)||(10067704-10067786)
chr6 (227-315)||(25084898-25084986)
chr6 (483-531)||(34937852-34937900)
chr6 (445-555)||(10067681-10067791)
chr6 (230-307)||(6524842-6524919)
chr6 (231-356)||(10219536-10219661)
chr6 (263-355)||(17848811-17848903)
chr6 (263-355)||(33806681-33806773)
chr6 (264-307)||(21237189-21237232)
chr6 (457-531)||(17848800-17848874)
chr6 (282-339)||(8161466-8161523)
chr6 (273-338)||(12291631-12291696)
chr6 (485-534)||(12291631-12291680)
chr6 (282-339)||(24084628-24084685)
chr6 (278-355)||(28995518-28995595)
chr6 (268-341)||(31142179-31142252)
chr6 (273-341)||(7792053-7792121)
chr6 (260-355)||(20565755-20565850)
chr6 (232-355)||(21021076-21021199)
chr6 (322-353)||(23140531-23140562)
chr6 (284-355)||(31315266-31315336)
chr6 (274-340)||(17848688-17848754)
chr6 (266-311)||(9307264-9307309)
chr6 (486-531)||(9307290-9307335)
chr6 (445-530)||(9436700-9436785)
chr6 (469-530)||(27223742-27223803)
chr6 (281-342)||(34937841-34937902)
chr6 (482-530)||(2044264-2044312)
chr6 (275-307)||(4964319-4964351)
chr6 (487-531)||(9762615-9762659)
chr6 (253-337)||(28748036-28748120)
chr6 (483-531)||(31803967-31804015)
[»] scaffold0687 (3 HSPs)
scaffold0687 (251-354)||(1596-1699)
scaffold0687 (483-531)||(1637-1685)
scaffold0687 (483-534)||(1839-1891)
[»] chr3 (43 HSPs)
chr3 (293-355)||(34979159-34979221)
chr3 (275-356)||(3941793-3941874)
chr3 (282-355)||(7672498-7672570)
chr3 (228-309)||(31198069-31198150)
chr3 (263-307)||(4136539-4136583)
chr3 (482-530)||(47944546-47944594)
chr3 (226-297)||(30669351-30669422)
chr3 (230-297)||(51889755-51889822)
chr3 (282-340)||(43838488-43838546)
chr3 (484-529)||(21433552-21433597)
chr3 (273-354)||(22235228-22235309)
chr3 (260-305)||(23195755-23195800)
chr3 (231-340)||(30843802-30843911)
chr3 (266-339)||(40618907-40618980)
chr3 (271-343)||(1182991-1183063)
chr3 (486-530)||(22235484-22235528)
chr3 (284-356)||(43838805-43838877)
chr3 (300-356)||(45906846-45906902)
chr3 (486-530)||(47944344-47944388)
chr3 (263-341)||(621856-621932)
chr3 (232-311)||(26483037-26483116)
chr3 (483-530)||(34979174-34979221)
chr3 (484-531)||(40618933-40618980)
chr3 (281-343)||(17571997-17572059)
chr3 (266-340)||(26366612-26366685)
chr3 (231-354)||(29079251-29079378)
chr3 (274-356)||(46008567-46008649)
chr3 (469-530)||(257869-257930)
chr3 (483-512)||(14984670-14984699)
chr3 (227-308)||(24255215-24255296)
chr3 (295-365)||(26019275-26019349)
chr3 (483-512)||(30843802-30843831)
chr3 (232-341)||(40619187-40619296)
chr3 (483-548)||(40619188-40619253)
chr3 (271-356)||(41897880-41897965)
chr3 (266-335)||(43908634-43908703)
chr3 (232-340)||(7672337-7672445)
chr3 (284-344)||(22235477-22235537)
chr3 (251-339)||(25321687-25321775)
chr3 (483-531)||(34294103-34294151)
chr3 (483-543)||(43838486-43838546)
chr3 (483-531)||(43838821-43838869)
chr3 (263-307)||(45681418-45681462)
[»] chr1 (48 HSPs)
chr1 (483-550)||(31738368-31738435)
chr1 (263-328)||(50155542-50155606)
chr1 (232-340)||(27900901-27901009)
chr1 (484-531)||(46187336-46187383)
chr1 (235-340)||(9890696-9890801)
chr1 (266-307)||(40872755-40872796)
chr1 (483-531)||(29795258-29795306)
chr1 (231-355)||(32743313-32743437)
chr1 (251-343)||(45679523-45679615)
chr1 (234-309)||(16192273-16192348)
chr1 (273-340)||(31738368-31738435)
chr1 (224-295)||(45392280-45392351)
chr1 (260-318)||(3048193-3048251)
chr1 (233-307)||(35621592-35621666)
chr1 (283-353)||(46500780-46500850)
chr1 (232-297)||(9777146-9777211)
chr1 (264-341)||(27463757-27463834)
chr1 (482-531)||(29795111-29795160)
chr1 (270-343)||(29795255-29795328)
chr1 (231-340)||(39162405-39162514)
chr1 (251-339)||(2998898-2998986)
chr1 (486-542)||(8234316-8234372)
chr1 (251-355)||(10519501-10519605)
chr1 (486-522)||(46547314-46547350)
chr1 (284-340)||(51849552-51849608)
chr1 (232-307)||(6541006-6541081)
chr1 (483-542)||(8779001-8779060)
chr1 (264-307)||(10018735-10018778)
chr1 (320-355)||(30050577-30050612)
chr1 (282-381)||(41730101-41730200)
chr1 (487-534)||(45679561-45679608)
chr1 (284-355)||(45679721-45679792)
chr1 (492-531)||(50155570-50155609)
chr1 (275-365)||(5529649-5529739)
chr1 (225-355)||(6727979-6728109)
chr1 (231-317)||(8791908-8791994)
chr1 (277-355)||(9890566-9890643)
chr1 (288-338)||(48701717-48701767)
chr1 (282-343)||(8234310-8234371)
chr1 (260-341)||(33746359-33746440)
chr1 (236-317)||(38445190-38445271)
chr1 (230-307)||(50804264-50804341)
chr1 (483-531)||(6541269-6541317)
chr1 (486-534)||(8241943-8241991)
chr1 (251-343)||(31415049-31415141)
chr1 (229-281)||(32669782-32669834)
chr1 (486-530)||(40193067-40193111)
chr1 (482-534)||(51849551-51849603)
[»] scaffold0102 (1 HSPs)
scaffold0102 (483-531)||(27103-27151)
[»] scaffold0003 (1 HSPs)
scaffold0003 (273-354)||(328806-328887)
[»] scaffold0044 (1 HSPs)
scaffold0044 (264-356)||(50769-50861)
[»] scaffold0022 (1 HSPs)
scaffold0022 (263-355)||(82857-82948)
[»] scaffold0050 (1 HSPs)
scaffold0050 (230-340)||(81293-81403)
[»] scaffold0252 (1 HSPs)
scaffold0252 (273-355)||(17131-17212)
[»] scaffold0211 (1 HSPs)
scaffold0211 (282-355)||(20035-20107)
[»] scaffold0005 (1 HSPs)
scaffold0005 (264-340)||(29212-29288)


Alignment Details
Target: chr5 (Bit Score: 391; Significance: 0; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 114 - 615
Target Start/End: Complemental strand, 37853676 - 37853172
Alignment:
Q  114 ggggacttgtaaaaatattattattgttaaaaagtaaatatgtttttacctgccatttttatttttctcaaatgtgactttcagcttaaaattatttcat 213  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37853676 ggggatttgtaaaaatattattattgttaaaaagtaaatatgtttttacctgcaatttttatttttctcaaatgtgattttcagcttaaaattatttcat 37853577  T
Q  214 attattaatattaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaa 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  37853576 attattaatattaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagt-tttcaacgtattaaaattttaaaatagtttttaa 37853478  T
Q  314 ttgtataatttgttagtcaaaatagtctctaacattaaaataacatttcaatgtcaatattaacttttacacggatatgataataaaaatgtatattgaa 413  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  37853477 ttgtatactttgttagtcaaaatagtctctaacattaaaatagtatttcaatgtcaatattaactttcacacggatatgataataaatatgtatattgaa 37853378  T
Q  414 ggactaatacgacaatannnnnnnnaacaagctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaa 513  Q
    |||||||||||||||||        |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  37853377 ggactaatacgacaatattttttttaacaagctaatacgacagtattaacaaagtattttagtgttattgactattttgactaacaaagtgcacaatcaa 37853278  T
Q  514 aaattattttaaaattttaatgtattgagagattattctggtctttgaacatttcta-----cgtcgttataaaagagatagaattttgattaccttata 608  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||      |||||||| ||||||||||||||||||||||||||||    
T  37853277 agattattttaaaattttaatgtattgagagattattctggtctttgaatatttctatgttgagtcgttat-aaagagatagaattttgattaccttata 37853179  T
Q  609 ttatatt 615  Q
    |||||||    
T  37853178 ttatatt 37853172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 7756934 - 7757024
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||| | |||||||| ||| |||||| |||||||||||||||  ||||| ||  | |||||||||||||||||||||||||||||||||    
T  7756934 agtagtaacaatagtctctcagtgtattgaaattttaaaatagtccttaatcgttgattttgttagtcaaaatagtctctaacattaaaat 7757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 37853809 - 37853763
Alignment:
Q  8 aatccaatttgtgtttctgagatttttagggtttttatgtgtcaaaa 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37853809 aatccaatttgtgtttctgagatttttagggtttttatgtgtcaaaa 37853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 37181084 - 37181160
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||| |||||||||  ||| ||||||||||||||||||    
T  37181084 agtagtcataatagtctcttaatatattaaaattttaaaa-agtctttaattgtgcaatctgttagtcaaaatagtct 37181160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 16127049 - 16127155
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||| | | | |||||  || ||||||||| |||||||| |||| |||| ||||||| ||||||||  || ||||| || |||||||||    
T  16127049 gtaatagtcattttggtccctaaatgtgtaaggagtagtcacaatagtctctcaaagtatcaaaatttcaaaatagtccttgattgtgtagtttgttagt 16127148  T
Q  331 caaaata 337  Q
    |||||||    
T  16127149 caaaata 16127155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 16750363 - 16750262
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataacatttca 363  Q
    |||||||| |||| ||||| ||||||| |||||||||||||||||  |||||||  | | | ||||||| ||| |||||| ||||||||||||  |||||    
T  16750363 agtagtcacaataatcttttaatgtatcaaaattttaaaatagttcataattgtgcactctattagtcacaatcgtctctgacattaaaataatttttca 16750264  T
Q  364 at 365  Q
    ||    
T  16750263 at 16750262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 27770024 - 27769983
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27770024 tagtcataatagtctttcaatgtattaaaattctaaaatagt 27769983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 355
Target Start/End: Complemental strand, 917265 - 917141
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||| ||| |||||||  ||  | |||||| ||| |||  |||||||||  ||||||||||||||| ||| |||||| | ||| ||  |    
T  917265 gtaatagtcattttggttcctgaatgtgtaaatattagtcacaatcgtccctcaatgtatcgaaattttaaaatagtctttgattgtacactttatttat 917166  T
Q  331 caaaatagtctctaacattaaaata 355  Q
    ||||||||||||| ||| |||||||    
T  917165 caaaatagtctctcacaataaaata 917141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 3599826 - 3599918
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||| ||||||||   | |||||||| ||||||||||||||| ||| ||||| || ||||||| ||||||| |||||| || ||||||||    
T  3599826 gagtagtgataatagttacttaatgtattgaaattttaaaatagtgtttgattgtgtattttgttaatcaaaatggtctctcacgttaaaata 3599918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 8206135 - 8206087
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  8206135 gactattttgattaacaatgtgcacaatcaaagactattttaaaatttt 8206087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 555
Target Start/End: Original strand, 19342534 - 19342586
Alignment:
Q  503 tgcacaatcaaaaattattttaaaattttaatgtattgagagattattctggt 555  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||| ||||    
T  19342534 tgcacaatcaaaaactattttaaaattttaatatattgatagattattgtggt 19342586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 6645694 - 6645784
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||| | |||||||| ||||||||| |||||||||||||||| ||||||| | |||  |||| || |||||||||  | ||||||||||    
T  6645694 agtagttacaatagtctatcaatgtatcaaaattttaaaatagtctttaattatgtaagatgtttgttaaaatagtcatttacattaaaat 6645784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 11535022 - 11534948
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| ||||||||||||||||||||||    
T  11535022 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtctctaacattaaaataa 11534948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 14461880 - 14461770
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||||||| | | ||| |  ||||||| | || |||| ||||||| | |||| ||||||||||||||| | | |||||| | || |||||    
T  14461880 ggtaatagtcattttgatccctaaatatgtaacgagtggccacaataatctttcagtctattcaaattttaaaatagtctctgattgtacacttcgttag 14461781  T
Q  330 tcaaaatagtc 340  Q
    |||||||||||    
T  14461780 tcaaaatagtc 14461770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 366
Target Start/End: Original strand, 29686426 - 29686560
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    ||||||||| |||| | | |||||||| || ||||||||| |||| ||  ||||||||||||||||| |||||| |  ||  ||||  | | ||||| ||    
T  29686426 taatagtcactttggtccatgaatgtataatgagtagtcacaataatccctcaatgtattaaaatttcaaaatactcattgcttgtgcactctgttaatc 29686525  T
Q  332 aaaatagtctctaacattaaaataacatttcaatg 366  Q
    |||||||||||| ||  |||||||| |||||||||    
T  29686526 aaaatagtctctgacgctaaaataatatttcaatg 29686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 550
Target Start/End: Original strand, 296539 - 296596
Alignment:
Q  493 attaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    ||||| ||||||||||||||||| |||||||||||||| |||| ||| | ||||||||    
T  296539 attaagaaagtgcacaatcaaaacttattttaaaatttcaatgcattaaaagattatt 296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 530
Target Start/End: Original strand, 917118 - 917203
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||| |||| |||||||||| ||||||| | | |  |||||||||||| || |||||| ||||||||| | |||||||||||||    
T  917118 ctaatatgacaatattaacaaaatattttattgtgagagactattttgataaataaagtgtacaatcaaagactattttaaaattt 917203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 9023481 - 9023401
Alignment:
Q  274 atagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||| |||||||||||||||||| |||| || | | |||||| | ||| ||||||||||||||| |||||||| |||||    
T  9023481 atagtctatcaatgtattaaaatttt-aaattgtctctgattgtacactttattagtcaaaatagtccctaacattcaaata 9023401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 22391721 - 22391765
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaat 304  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||    
T  22391721 aacgaatagtcataatagtctttcaatatatcaaaattttaaaat 22391765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 366
Target Start/End: Complemental strand, 26675377 - 26675241
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||||||| |||| ||| |||||||  || || || ||| |||| ||||| ||||||| || ||| ||||||||| ||| |||||  | | |||||     
T  26675377 ggtaatagtcactttggttcttgaatgtgtaatgactaatcacaataatcttttaatgtatcaatattctaaaatagtctttgattgtgcattctgttac 26675278  T
Q  330 tcaaaatagtctctaacattaaaataacatttcaatg 366  Q
    |||||||||||| | ||| ||||||||  ||||||||    
T  26675277 tcaaaatagtctatgacactaaaataatctttcaatg 26675241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 366
Target Start/End: Complemental strand, 26946985 - 26946849
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||||||| |||| ||| |||||||  || || || ||| |||| ||||| ||||||| || ||| ||||||||| ||| |||||  | | |||||     
T  26946985 ggtaatagtcactttggttcttgaatgtgtaatgactaatcacaataatcttttaatgtatcaatattctaaaatagtctttgattgtgcattctgttac 26946886  T
Q  330 tcaaaatagtctctaacattaaaataacatttcaatg 366  Q
    |||||||||||| | ||| ||||||||  ||||||||    
T  26946885 tcaaaatagtctatgacactaaaataatctttcaatg 26946849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 33204590 - 33204527
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacat 348  Q
    ||||||||||||||| || ||||||||| |||||| |||| |||| | |||||||||||||||||    
T  33204590 aatgtattaaaattt-aagatagtttttgattgtacaattcgttaattaaaatagtctctaacat 33204527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 42525216 - 42525308
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||| ||||| ||||| ||||||| | |||||||||||| ||||| |||||  | ||  |||||||||||||| ||| ||||| |||||    
T  42525216 gagtagtcgtaataatcttttaatgtatcataattttaaaataatttttgattgtggacttcattagtcaaaatagtttctgacattgaaata 42525308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 550
Target Start/End: Complemental strand, 29686534 - 29686467
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    ||||||||||||||||| ||||||||| |||  | |||||| ||||||||||  |||||| |||||||    
T  29686534 gactattttgattaacagagtgcacaagcaatgagtattttgaaattttaatacattgagggattatt 29686467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 30118691 - 30118620
Alignment:
Q  294 aattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataacatttcaat 365  Q
    |||||||||||||| ||| ||||| |  ||||||||||||| ||||| || ||| ||||||||||| |||||    
T  30118691 aattttaaaatagtctttgattgtgttctttgttagtcaaattagtcactgacactaaaataacatctcaat 30118620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 37853451 - 37853502
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    ||||||||||| |||||||||  ||||| ||||| |||||||||||||||||    
T  37853451 gactattttgactaacaaagtatacaattaaaaactattttaaaattttaat 37853502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 11498082 - 11498008
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| |||||| |||||||||||||||    
T  11498082 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataa 11498008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 11505438 - 11505364
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| |||||| |||||||||||||||    
T  11505438 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataa 11505364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 11512832 - 11512758
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| |||||| |||||||||||||||    
T  11512832 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataa 11512758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 11520208 - 11520134
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| |||||| |||||||||||||||    
T  11520208 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataa 11520134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 11527616 - 11527542
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| |||||| |||||||||||||||    
T  11527616 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataa 11527542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 16125515 - 16125461
Alignment:
Q  300 aaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||||||||| |||||||| ||||||| | |||||| ||||| ||||||||||    
T  16125515 aaaatagtttttgattgtatactttgttaattaaaataatctctcacattaaaat 16125461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 23159027 - 23159137
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||||||| |||  | | |||||||  || || |||| |||||||||  ||||||||| |||||||||||||||| ||| |||||  | || |||||    
T  23159027 ggtaatagtcactttagtccctgaatgtgtaatgattagttataatagtccatcaatgtatcaaaattttaaaatagtatttgattgtgcatttcgttag 23159126  T
Q  330 tcaaaatagtc 340  Q
    | |||||||||    
T  23159127 taaaaatagtc 23159137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 28503836 - 28503886
Alignment:
Q  293 aaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||||||||||||| |||||||||  | | ||||||||||||||||||||    
T  28503836 aaattttaaaatagtctttaattgtgcattctgttagtcaaaatagtctct 28503886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 529
Target Start/End: Original strand, 28561430 - 28561476
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatt 529  Q
    ||||||||| | ||||| ||| |||||||||||||||||||||||||    
T  28561430 gactattttaaataacatagtacacaatcaaaaattattttaaaatt 28561476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 37269159 - 37269097
Alignment:
Q  275 tagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    |||| ||| |||||||| |||||| |||||||||||| |||||||  || |||||||||||||    
T  37269159 tagtttttaaatgtattgaaatttaaaaatagtttttgattgtatgtttcgttagtcaaaata 37269097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 37853257 - 37853323
Alignment:
Q  289 attaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||| | ||| |||||  | |||||||||||||||||||  ||||| |||||||    
T  37853257 attaaaattttaaaataatctttgattgtgcactttgttagtcaaaatagtcaataacactaaaata 37853323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 11505343 - 11505428
Alignment:
Q  446 taatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||| |||||||||| ||||||| | |||  |||||| |||| ||  |||||| | ||||||| | ||||||||||||||    
T  11505343 taatacgacaatattaacaaattattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaatttt 11505428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 11512737 - 11512822
Alignment:
Q  446 taatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||| |||||||||| ||||||| | |||  |||||| |||| ||  |||||| | ||||||| | ||||||||||||||    
T  11512737 taatacgacaatattaacaaattattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaatttt 11512822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 11520113 - 11520198
Alignment:
Q  446 taatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||| |||||||||| ||||||| | |||  |||||| |||| ||  |||||| | ||||||| | ||||||||||||||    
T  11520113 taatacgacaatattaacaaattattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaatttt 11520198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 11527521 - 11527606
Alignment:
Q  446 taatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||| |||||||||| ||||||| | |||  |||||| |||| ||  |||||| | ||||||| | ||||||||||||||    
T  11527521 taatacgacaatattaacaaattattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaatttt 11527606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 19342594 - 19342537
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgt 317  Q
    ||||||||  || |||| ||| ||||| |||||||||||||||||||||||| |||||    
T  19342594 aacgagtaaccacaataatctatcaatatattaaaattttaaaatagtttttgattgt 19342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 42525292 - 42525247
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaatt 529  Q
    |||||||||| |||  |||| |||||||||||||||||||||||||    
T  42525292 actattttgactaatgaagtccacaatcaaaaattattttaaaatt 42525247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 8206087 - 8206151
Alignment:
Q  292 aaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||||||||| ||| |||||  |  |||||| |||||||||||||| || |||||||||    
T  8206087 aaaattttaaaatagtctttgattgtgcacattgttaatcaaaatagtctctgacgttaaaataa 8206151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 9955355 - 9955387
Alignment:
Q  324 tgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||||||||| ||||||||||||||||    
T  9955355 tgttagtcaaaatagtttctaacattaaaataa 9955387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 22579502 - 22579550
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||||||||||||| | |||||   ||||||||||||||||    
T  22579502 gactattttgattaacaaagtgtataatcagggattattttaaaatttt 22579550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 530
Target Start/End: Original strand, 24444393 - 24444441
Alignment:
Q  482 tgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||||||||||||||| | |||||||||| |  ||||||||||||    
T  24444393 tgactattttgattaacaaaatacacaatcaaataccattttaaaattt 24444441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 27817292 - 27817224
Alignment:
Q  287 gtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||| ||||||||||||||||||||| | || | || ||||||||||| || |||||||  |||||||    
T  27817292 gtattgaaattttaaaatagtttttaaatttacatttcgttagtcaaaacagcctctaacgctaaaata 27817224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 37840349 - 37840301
Alignment:
Q  179 tctcaaatgtgactttcagcttaaaattatttcatattattaatattaa 227  Q
    |||||||||||||||| || |||||| | ||||||||| ||||||||||    
T  37840349 tctcaaatgtgacttttagtttaaaactttttcatattgttaatattaa 37840301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 42420600 - 42420532
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaa 334  Q
    |||||| ||| |||||| ||||||| |||||||||||||||||  | ||| | || |||||||||||||    
T  42420600 tagtcacaattgtctttaaatgtatcaaaattttaaaatagttcgtgattatgtactttgttagtcaaa 42420532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 42932813 - 42932893
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||||||  |||||| ||| |||||||  ||||||||||||||||| | ||||| || ||  || ||||||||||||    
T  42932813 aacgagtagtcgaaatagttttttaatgtatcgaaattttaaaatagtttctcattgtgtacttcatttgtcaaaatagtc 42932893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 230 - 356
Target Start/End: Original strand, 12034380 - 12034506
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||||| | | |||||||| |||||||||||| |||||||  ||||||||| ||||||  |||||||| | | |||||||| ||||||||    
T  12034380 ggtaatagtcattttggtccctgaatgtataacgagtagtcacaatagtccctcaatgtatcaaaattgcaaaatagtctctgattgtatactttgttag 12034479  T
Q  330 tcaaaatagtctctaacattaaaataa 356  Q
    |||||||||||||| ||| ||||||||    
T  12034480 tcaaaatagtctctgacactaaaataa 12034506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 356
Target Start/End: Complemental strand, 32934208 - 32934122
Alignment:
Q  270 cataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||  | |||| ||||||||||||| ||||||||||||||||    
T  32934208 cataatagtccctcaatgtatcaaaattttaaaatagtttttgattgtgcactttgctagtcaaaatagtttctaacattaaaataa 32934122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 38932633 - 38932710
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||||| | |||||||||||  ||  | ||||||||||||| ||||||||||||||||||||||||||||    
T  38932633 ggtaatagtcatttcggttcgtgaatgtgtaataaatagtcataatagtgtttcaatgtattaaaattttaaaatagt 38932710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 346
Target Start/End: Original strand, 17381282 - 17381398
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||||| ||| |||||||  | | |||||||| ||||||| |||||||||| ||||||| |||| ||| | | || ||  | ||||||||    
T  17381282 ggtaatagtcattttggttcctgaatgtgtagcaagtagtcacaatagtccttcaatgtatcaaaatttcaaaaaagtctctgatagtccactttgttag 17381381  T
Q  330 tcaaaatagtctctaac 346  Q
    |||||||||||||||||    
T  17381382 tcaaaatagtctctaac 17381398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 7617018 - 7616951
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |  | |||||||||||||||||||    
T  7617018 aatagtcttttaatgtattaaaattttaaaatagtttttgattttgcactttgttagtcaaaatagtc 7616951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 13834365 - 13834451
Alignment:
Q  270 cataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||||  ||||| ||| ||||||||||||||||  || |||||  | |||||||||||||||||||| ||||||||||||||    
T  13834365 cataatagtccctcaatttatcaaaattttaaaatagtccttgattgtgcactttgttagtcaaaatagtctttaacattaaaataa 13834451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 531
Target Start/End: Complemental strand, 13834473 - 13834387
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||| |||| |||||||||| ||||||| | |||  ||||||||||| |||||||||||||||||||  | ||||||||||||||    
T  13834473 ctaatatgacaatattaacaaattattttaatgttaaagactattttgactaacaaagtgcacaatcaaggactattttaaaatttt 13834387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 8755925 - 8756010
Alignment:
Q  446 taatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||| |||| ||||||| |||||||||| | |||  |||||||||||||||| ||||||| ||||||  ||||||||||||||||    
T  8755925 taatatgacaatattaacgaagtattttaatgttagagactattttgattaacgaagtgcataatcaatgattattttaaaatttt 8756010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 51150831 - 51150963
Alignment:
Q  225 taagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcata--atagtctttcaatgtattaaaattttaaaatagtttttaattgtataat 322  Q
    |||| ||||||| |||||||| ||| ||||| |  || |||||||||||  |||| |  ||||||||| |||||||||||||||||  | |||||  | |    
T  51150831 taaggggtaataatcattttggttcctgaatatgtaaggagtagtcatataatagaccatcaatgtatcaaaattttaaaatagttcgtgattgtgcatt 51150930  T
Q  323 ttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||| ||||||||| ||||||||||||||    
T  51150931 ttgttagtgaaaatagtccctaacattaaaata 51150963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 341
Target Start/End: Original strand, 24806492 - 24806580
Alignment:
Q  253 aatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    |||||| ||| | ||||||| |||||| ||||||||||||||||||||||||||| | | ||||| |  ||||||||| ||||||||||    
T  24806492 aatgtataacaaatagtcattatagtccttcaatgtattaaaattttaaaatagtatctgattgtgtgttttgttagttaaaatagtct 24806580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 452 - 556
Target Start/End: Original strand, 32934107 - 32934211
Alignment:
Q  452 gacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattattc 551  Q
    |||| |||||||||| ||||||| | |||   |||||||||| || ||||||||||||||||||| |||||||||||||| ||  |||||| || ||||     
T  32934107 gacaatattaacaaattattttaatgttagaaactattttgactagcaaagtgcacaatcaaaaactattttaaaattttgatacattgagggactatta 32934206  T
Q  552 tggtc 556  Q
    |||||    
T  32934207 tggtc 32934211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 40317870 - 40317746
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    |||||||||||||||| | |||||||  || || | |||| ||||||   ||||||||| ||| ||||||||||||  || |||||| | ||||||| ||    
T  40317870 taatagtcattttgatccatgaatgtgtaatgaattgtcacaatagttcatcaatgtataaaatttttaaaatagtccttgattgtacactttgttaatc 40317771  T
Q  332 aaaatagtctctaacattaaaataa 356  Q
    |||||||||||| || |||||||||    
T  40317770 aaaatagtctctgacgttaaaataa 40317746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 40327944 - 40327820
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    |||||||||||||||| | |||||||  || || | |||| ||||||   ||||||||| ||| ||||||||||||  || |||||| | ||||||| ||    
T  40327944 taatagtcattttgatccatgaatgtgtaatgaattgtcacaatagttcatcaatgtataaaatttttaaaatagtccttgattgtacactttgttaatc 40327845  T
Q  332 aaaatagtctctaacattaaaataa 356  Q
    |||||||||||| || |||||||||    
T  40327844 aaaatagtctctgacgttaaaataa 40327820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 46804783 - 46804879
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||| ||| | |||||||  ||||||||| |||||||||||||||| | | |||||| | |||||||||||||||||||||| |||  |||||||    
T  46804783 aacgagcagtgacaatagtccctcaatgtatcaaaattttaaaatagtctctgattgtacactttgttagtcaaaatagtctctgacacaaaaataa 46804879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 46805094 - 46805050
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaat 304  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  46805094 aacgagtagtcataatagtctttcaatatattaaaattttaaaat 46805050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 7616951 - 7617002
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  7616951 gactattttgactaacaaagtgcaaaatcaaaaactattttaaaattttaat 7617002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 354
Target Start/End: Complemental strand, 8171036 - 8170945
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||||||||||||||  ||||||||| ||||||| |||||||| | | ||| |  |||| ||||||||||||| ||||||| ||||||||    
T  8171036 gagtagtcataatagtccctcaatgtataaaaatttcaaaatagtctctgattttgcaattcgttagtcaaaataatctctaatattaaaat 8170945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 27146288 - 27146363
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||||||||| |||| ||  || |||||||||| |||||   ||||||||||||||||||||||||||    
T  27146288 taatagtcattttgattcatgaacgtgtaaggagtagtcatgatagttcatcaatgtattaaaattttaaaatagt 27146363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 35255541 - 35255494
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  35255541 aacgagtagtcacaatagtctctcaatgtattaaaattttaaaatagt 35255494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 971873 - 971954
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    ||||||| |||| ||||||| |||||||||| ||||||| |||||||| ||| |||||  | ||||||||||||| ||||||    
T  971873 aacgagttgtcacaatagtcattcaatgtatcaaaatttcaaaatagtctttgattgtgcactttgttagtcaaagtagtct 971954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 355
Target Start/End: Original strand, 1758297 - 1758422
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||| |||||||||   | |||||||  || |||||| |||||||| |  ||||||||| ||||||| |||||||||| | ||||| || || |||||    
T  1758297 ggtaatggtcattttggcccttgaatgtgtaaggagtagccataatagacactcaatgtatcaaaatttcaaaatagtttcttattgtgtacttcgttag 1758396  T
Q  330 tcaaaatagtctctaacattaaaata 355  Q
    |||||||||||  | |||||||||||    
T  1758397 tcaaaatagtccttgacattaaaata 1758422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 924891 - 924811
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| | | ||| |  | | |||||||||||||||||    
T  924891 aacgagtagtaataatagtctttcaatgtagcaaaattttaaaatagtatctgattatgcattatgttagtcaaaatagtc 924811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 338
Target Start/End: Original strand, 26499277 - 26499385
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||||| ||| |||||||  ||  |||||||| |||| ||| | |||||||||||||| ||||||| |   | ||| |||| ||||||||    
T  26499277 ggtaatagtcattttggttcctgaatgtgtaaaaagtagtcacaataatctcttaatgtattaaaattctaaaataataaatgattttatactttgttag 26499376  T
Q  330 tcaaaatag 338  Q
    |||||||||    
T  26499377 tcaaaatag 26499385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 55132643 - 55132519
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    ||||||||||||||||   |||||||  || ||| ||||| |||||| ||||||||||| ||||||||||||| |||||| |||    | ||||||| ||    
T  55132643 taatagtcattttgatctctgaatgtgtaaggagcagtcaaaatagtttttcaatgtatcaaaattttaaaattgtttttgattcggcactttgttaatc 55132544  T
Q  332 aaaatagtctctaacattaaaataa 356  Q
    |||| | ||||| || |||||||||    
T  55132543 aaaacaatctctgacgttaaaataa 55132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 17381510 - 17381577
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatca 512  Q
    |||||| |||| ||||||| || ||||||| ||| |  ||||||||||||||||||||||||||||||    
T  17381510 ctaatatgacaatattaacgaaatattttaatatcaaggactattttgattaacaaagtgcacaatca 17381577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 33361158 - 33361063
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||||| ||||||||||||||||| | | |||||| | ||| |||  | ||||| || ||| |||||||||||||||||| | |||||||||    
T  33361158 aacgagtagttataatagtctttcaatgcactgaaatttcacaatggttcctgattgtgtattttattagtcaaaatagtctctgatattaaaata 33361063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 38932870 - 38932800
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||| ||||||||||| | || ||  |||||| | ||||||||||||||||||||||||||||||||||    
T  38932870 aatgtatcaaaattttaaatt-gtcttcgattgtacattttgttagtcaaaatagtctctaacattaaaata 38932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 20217540 - 20217486
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaata 305  Q
    |||||||| ||||||||| || |||||||| ||||||||| ||||||||||||||    
T  20217540 tgaatgtataacgagtagccacaatagtctctcaatgtatcaaaattttaaaata 20217486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 531
Target Start/End: Complemental strand, 51150986 - 51150900
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||| |||| |||||||||| ||||||| | |||  ||||||||| | ||||||| ||||||||||  || ||||||||||||||    
T  51150986 ctaatatgacaatattaacaaaatattttaatgttagggactattttcactaacaaaatgcacaatcacgaactattttaaaatttt 51150900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 263 - 356
Target Start/End: Original strand, 4161653 - 4161746
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| ||||||| |||||||||| ||||||| ||||||||  || ||| || | | |||| ||||||||||||||| ||  ||||||||    
T  4161653 gagtagtcacaatagtccttcaatgtatcaaaatttcaaaatagtccttgattatacattctgttggtcaaaatagtctctgactctaaaataa 4161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 4215275 - 4215151
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||| ||| |  ||||||  |||||||||||  |||||||  |||||| || |||||||||||||||| |   |||||  | || ||||     
T  4215275 ggtaatagtcatttcgatacccgaatgtgtaacgagtagtcgcaatagtccctcaatgaatcaaaattttaaaatagtctcggattgtgcacttcgttaa 4215176  T
Q  330 tcaaaatagtctctaacattaaaata 355  Q
    |||||||||||||| |||||||||||    
T  4215175 tcaaaatagtctct-acattaaaata 4215151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 27298534 - 27298631
Alignment:
Q  239 cattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaat 336  Q
    ||||||||||  |||||| | || ||||||| |||||||||  | ||||||| |||||||||||||||| ||||||| | || | | |||||||||||    
T  27298534 cattttgatttctgaatgcataatgagtagttataatagtccgtgaatgtatcaaaattttaaaatagtctttaattatgtactattttagtcaaaat 27298631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 45615636 - 45615677
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  45615636 tagtcacaacagtctttcaatgtattaaaattttaaaatagt 45615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 8170807 - 8170759
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||| |||||||||||||||||||| | |||||| |||||||    
T  8170807 gactattttgactaacaaagtgcacaatcaaagactattttgaaatttt 8170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 13834584 - 13834540
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||    
T  13834584 gagtagtcacaacagtcttttaatgtattaaaattttaaaatagt 13834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 508
Target Start/End: Original strand, 45615751 - 45615807
Alignment:
Q  452 gacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcaca 508  Q
    |||| |||||||||| ||||||| |||||  ||||||||||| ||||||||||||||    
T  45615751 gacaatattaacaaattattttaatattagagactattttgactaacaaagtgcaca 45615807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 51151127 - 51151051
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatag-tctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||| |||||| | | |||||||  |||||||||||| ||||  ||| ||||||||||||||||||||||||||    
T  51151127 taatagttattttggtccttgaatgtgtaacgagtagtcacaataaatctctcaatgtattaaaattttaaaatagt 51151051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 27395523 - 27395468
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattga 541  Q
    |||||||| |||| ||||| ||||||||| |||||||||||||||| || ||||||    
T  27395523 tattttgactaacgaagtgaacaatcaaatattattttaaaattttgatatattga 27395468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 539
Target Start/End: Original strand, 30888505 - 30888576
Alignment:
Q  468 tattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtatt 539  Q
    ||||||||  |||| || |||||||| ||||| |||| | ||||||| |||||||||||||||| |||||||    
T  30888505 tattttagcgttatagaatattttgactaacagagtgaataatcaaagattattttaaaattttgatgtatt 30888576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 356
Target Start/End: Original strand, 32123824 - 32123898
Alignment:
Q  281 ttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||||||||||||||||||||| ||| ||| | || || |||||| |||||||| | | ||||||||||||    
T  32123824 ttcaatgtattaaaattttaaaatagtctttgattttgtacttcgttagttaaaatagtat-tgacattaaaataa 32123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 39331229 - 39331186
Alignment:
Q  274 atagtctttcaatgtattaaaattttaaaatagtttttaattgt 317  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||    
T  39331229 atagtcttttaatgtattgaaattttaaaatagtttttgattgt 39331186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 40836951 - 40836892
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||||||||||||||||||||||  || ||||| ||   ||||||||||||||||||||    
T  40836951 aatgtattaaaattttaaaatagtcattgattgtgtaccgtgttagtcaaaatagtctct 40836892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 42375339 - 42375216
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    |||||||||||||||||  |||||||  || |||||| || |||| |  || |||||||  |||||| ||| |||||||| ||| |  | || ||||||     
T  42375339 taatagtcattttgattattgaatgtgtaatgagtagccacaataattctttaatgtatcgaaatttcaaagtagtttttgattctgcacttcgttagtt 42375240  T
Q  332 aaaatagtctctaacattaaaata 355  Q
    |||||||||||| |||||||||||    
T  42375239 aaaatagtctctgacattaaaata 42375216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 46805781 - 46805876
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||| || ||||||   ||||||||||||||||||||| ||||  || |||||| | || ||||||||||||| | | | |||||||||||    
T  46805781 aacgagtagccacaatagtacctcaatgtattaaaattttaaagtagtcattgattgtacacttcgttagtcaaaataatatttgacattaaaata 46805876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 972179 - 972137
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtt 308  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||    
T  972179 tagtcataatagtatttcaacgtattaaaattctaaaatagtt 972137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 4161937 - 4161867
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||||| | ||||||| ||||||| ||||||||  | |||||||||||||||||||| | | ||||||||    
T  4161937 aatgtatcacaattttacaatagttattaattgtgcattttgttagtcaaaatagtctatgatattaaaat 4161867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 6553051 - 6552970
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||  ||||||||||||||||||||| | || | | |||||| | ||  |||||||||||||||||||||||| |||||    
T  6553051 aatagtccatcaatgtattaaaattttaaatt-gtctctgattgtacacttcattagtcaaaatagtctctaacattcaaata 6552970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 7616787 - 7616869
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||| ||||| ||||||||||||||||| | || | |||||||| | || ||||||||||||| ||  |||||||| ||||    
T  7616787 aatagtttttcagtgtattaaaattttaaatttgtctctaattgtacatttcgttagtcaaaataatccttaacattagaata 7616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 8170732 - 8170810
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaatttt-aaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||||||||||||  ||||| ||| |||| ||| |||||||| ||| |||||  | ||||||||||||||||||||||    
T  8170732 tagtcataatagtccatcaatatatcaaaaatttcaaaatagtctttgattgtgcactttgttagtcaaaatagtctct 8170810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 8755828 - 8755893
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||| |  | ||||||||||||||||||    
T  8755828 aatagtctctcaatttattaaa-ttttaaaatagtttttgattttgcattttgttagtcaaaatagt 8755893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 530
Target Start/End: Complemental strand, 8755893 - 8755847
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||||| ||||||| |||| ||||||||| |||||||||||||    
T  8755893 actattttgactaacaaaatgcaaaatcaaaaactattttaaaattt 8755847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 14945388 - 14945434
Alignment:
Q  269 tcataatagtctttcaatgtattaaaattttaaaatagtttttaatt 315  Q
    ||||||||||| |||||| ||| |||||||||||||||| |||||||    
T  14945388 tcataatagtccttcaatttatcaaaattttaaaatagtctttaatt 14945434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 326 - 356
Target Start/End: Complemental strand, 24806742 - 24806712
Alignment:
Q  326 ttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||||||||||||||||||||||||    
T  24806742 ttagtcaaaatagtctctaacattaaaataa 24806712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 356
Target Start/End: Complemental strand, 40407705 - 40407620
Alignment:
Q  270 cataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||| |||||||||| ||||||||||||||||  || |||||   ||||| |||||||||| | |  ||||||||||||||    
T  40407705 cataatagtccttcaatgtatcaaaattttaaaatagtcattgattgt-gcatttgctagtcaaaattgccattaacattaaaataa 40407620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 356
Target Start/End: Complemental strand, 45615800 - 45615766
Alignment:
Q  322 tttgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||||||||||||||||| ||||||||||    
T  45615800 tttgttagtcaaaatagtctctaatattaaaataa 45615766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 355
Target Start/End: Original strand, 46871523 - 46871646
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||| |||   |||||||  |||||||||||| | |||||| ||||| |||| ||||||||||  ||| ||| |||||| | |||||| |    
T  46871523 ggtaatagtcatttcgatcattgaatgtgtaacgagtagtcagattagtctctcaatatattgaaattttaaa--agtctttgattgtacactttgttgg 46871620  T
Q  330 tcaaaatagtctctaacattaaaata 355  Q
    | ||| |||||| | ||| |||||||    
T  46871621 tgaaagtagtctttgacaataaaata 46871646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 51003441 - 51003495
Alignment:
Q  292 aaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaac 346  Q
    |||||| ||| ||||||| ||||||| || ||| |||||||||||||||||||||    
T  51003441 aaaattctaagatagtttgtaattgtgtattttattagtcaaaatagtctctaac 51003495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 56095070 - 56095144
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| ||| |  | |||  ||||||| |||||| |||||||||||||||    
T  56095070 tcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataa 56095144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 56095279 - 56095201
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatag 338  Q
    |||||||||||| |||||| | ||| ||||||||||||||||||| || | | ||| |  | |||||||||||||||||    
T  56095279 aacgagtagtcacaatagtatctcattgtattaaaattttaaaattgtctctgattttgcactttgttagtcaaaatag 56095201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 1758540 - 1758495
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagttt 309  Q
    |||| ||| |||||||| |||||||||||||||||||| |||||||    
T  1758540 agtaatcacaatagtctctcaatgtattaaaattttaagatagttt 1758495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 10462906 - 10462829
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||| |||  || |||| |||  ||| |||||||||||||||| || ||||||| |||||| |||||||||    
T  10462906 ggtaatagtcaatttagtttgtgattgtgtaacaagtagtcataatagtcatttaatgtatcaaaattgtaaaatagt 10462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 512
Target Start/End: Original strand, 11840032 - 11840061
Alignment:
Q  483 gactattttgattaacaaagtgcacaatca 512  Q
    ||||||||||||||||||||||||||||||    
T  11840032 gactattttgattaacaaagtgcacaatca 11840061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 12922198 - 12922251
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgt 317  Q
    |||||||| |||||| |||||||||||  |||||| |||||||||||| |||||    
T  12922198 agtagtcacaatagtatttcaatgtatcgaaatttcaaaatagtttttgattgt 12922251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 21241791 - 21241836
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||  |||||||||||| |||| ||||||||||||||    
T  21241791 tattttgattaatgaagtgcacaatcgaaaactattttaaaatttt 21241836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 30316110 - 30316033
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||| ||| | | |||||||| ||  |||||||| || |||| |||||||||| |||||||| |||||||    
T  30316110 ggtaatagtcatattggtccctgaatgtataataagtagtcacaaaagtccttcaatgtatcaaaattttgaaatagt 30316033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 550
Target Start/End: Original strand, 35255463 - 35255528
Alignment:
Q  485 ctattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    ||||||||| ||| |||||||| ||||| | | |||||||||||||||||  ||||||||| ||||    
T  35255463 ctattttgactaataaagtgcaaaatcagatactattttaaaattttaatacattgagagactatt 35255528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 550
Target Start/End: Original strand, 37687252 - 37687301
Alignment:
Q  501 agtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    |||| ||||||||||| |||||||||||||| || |||||||| ||||||    
T  37687252 agtgtacaatcaaaaactattttaaaattttgatatattgagaaattatt 37687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 45278915 - 45278878
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattatttt 523  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  45278915 tattttgatcaacaaaatgcacaatcaaaaattatttt 45278878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 51234571 - 51234458
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||||||| ||| ||   |||||||| || ||||||| |||||||| ||||| | ||  |||||||||||||||| | ||| | |  | || |||||    
T  51234571 ggtaatagtcacttttatctctgaatgtataatgagtagttataatagtttttcattataacaaaattttaaaatagtctctaactatgcatttcgttag 51234472  T
Q  330 tcaaaatagtctct 343  Q
    ||||||||||||||    
T  51234471 tcaaaatagtctct 51234458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 971953 - 971905
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||| ||||| |||||||||||||||||||| | |||||| |||||||    
T  971953 gactactttgactaacaaagtgcacaatcaaagactattttgaaatttt 971905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 4215165 - 4215213
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||||||| ||||||||||||  | | ||||||||||||||    
T  4215165 gactattttgattaacgaagtgcacaatccgagactattttaaaatttt 4215213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 11840150 - 11840018
Alignment:
Q  222 tattaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataa 321  Q
    ||||||| |||||||||||||||| | | ||||||   || ||||||||  ||||| |  ||||||||| ||||||| ||||||||   | |||||  |     
T  11840150 tattaaggggtaatagtcattttggtccctgaatgcgtaaggagtagtcgcaataggccctcaatgtatcaaaatttcaaaatagtccctgattgtgcac 11840051  T
Q  322 tttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||||| ||||||||||| || || |||||||    
T  11840050 tttgttaatcaaaatagtccctgacgttaaaat 11840018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 14810516 - 14810440
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||| ||||||| ||| | |||| ||||||| ||||||||| || |||||  | ||| |||||||||||||||    
T  14810516 agtagtcacaatagtccttcgacgtatcaaaatttcaaaatagttcttgattgtccactttattagtcaaaatagtc 14810440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 17753258 - 17753334
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtc-tttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||||||||   ||||| |  || ||||||||| ||||||| ||||||||||| ||||||| ||||||||    
T  17753258 taatagtcattttgatctctgaatatgtaatgagtagtcacaatagtcatttcaatgtatcaaaatttcaaaatagt 17753334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 26404689 - 26404625
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    ||||||||  || ||||| |||||||||||||| |||||| ||||| | || |||||||||||||    
T  26404689 aatagtctcacattgtatcaaaattttaaaataatttttagttgtacatttcgttagtcaaaata 26404625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 527
Target Start/End: Original strand, 40317762 - 40317806
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaa 527  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||    
T  40317762 gactattttgattaacaaagtgtacaatcaaggactattttaaaa 40317806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 527
Target Start/End: Original strand, 40327836 - 40327880
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaa 527  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||    
T  40327836 gactattttgattaacaaagtgtacaatcaaggactattttaaaa 40327880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 42993763 - 42993815
Alignment:
Q  286 tgtattaaaattttaaaatagtttttaattgtataatt-tgttagtcaaaata 337  Q
    |||||| ||||||||||||||||||||||| | || || ||||||||||||||    
T  42993763 tgtattgaaattttaaaatagtttttaattatgtatttatgttagtcaaaata 42993815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 46433688 - 46433580
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||| | | | | |||  ||||||| |||| ||| ||| |||||||||| ||||||||  |||||  ||| |||||||| ||  |||||    
T  46433688 gtaatagtcattttggtccataattgtttaacgagtggtcacaattgtccttcaatgtatcaaaattttcgaataggctttgattgtatacttaattagt 46433589  T
Q  331 caaaatagt 339  Q
    |||||||||    
T  46433588 caaaatagt 46433580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 46804863 - 46804815
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||| |||||||||| ||||||| | | ||||||||||||||    
T  46804863 gactattttgactaacaaagtgtacaatcagagactattttaaaatttt 46804815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 46871848 - 46871793
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    ||||||||||||||||| |||||| ||| ||||| || ||| |||||||||||||||    
T  46871848 aatgtattaaaattttataatagtcttt-attgtgtactttattagtcaaaatagtc 46871793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 47097342 - 47097374
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaata 305  Q
    |||||||| ||||||||||||||||||||||||    
T  47097342 aatagtctctcaatgtattaaaattttaaaata 47097374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 48973478 - 48973434
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||| |||||||||||||||||||||  ||||||| ||||||||    
T  48973478 gagtaatcataatagtctttcaatgtacaaaaatttcaaaatagt 48973434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 35355290 - 35355377
Alignment:
Q  268 gtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| || ||| ||| |||||||||||||| |||||||||    
T  35355290 gtcataatagtctctcaatgtattgaaattttaaaatagtatttaattgtatgatctgtaagttaaaatagtctctaatattaaaata 35355377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 7603912 - 7604015
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacatta 350  Q
    |||||||| || ||||||||  |||||||||||||||||| |||||||||||||| ||||| |||||  | || ||| ||||||||||||||||| |||     
T  7603912 tgaatgtataatgagtagtcggaatagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgttggtcaaaatagtctctaatattg 7604011  T
Q  351 aaat 354  Q
    ||||    
T  7604012 aaat 7604015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 3094016 - 3093935
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||||||||||| ||| |||||||||||||||| ||||||| |||| |  ||||||||||||| ||| ||||||||||||    
T  3094016 aatagtctttcaatatatcaaaattttaaaatagtctttaattttatattacgttagtcaaaataatctttaacattaaaat 3093935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 4586748 - 4586825
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||| |||||||| | |||||||  |||||||||| | |||||||| | ||||||||||||||||||||||||    
T  4586748 ggtaatagttattttgatccttgaatgtgtaacgagtagttacaatagtctcttaatgtattaaaattttaaaatagt 4586825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 531
Target Start/End: Original strand, 6915514 - 6915561
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||    
T  6915514 actattttgattaacataatgcacaatcaaaaattattttaaaatttt 6915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 356
Target Start/End: Complemental strand, 29911681 - 29911558
Alignment:
Q  233 aatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtca 332  Q
    |||||||||||| ||   |||||||  ||||||| | || ||||||  || ||||||| |||||||||||||||||  ||| |||  | || ||||||||    
T  29911681 aatagtcattttcatctctgaatgtgtaacgagtggccacaatagttgtttaatgtatcaaaattttaaaatagttcataagtgtccacttcgttagtca 29911582  T
Q  333 aaatagtctctaacattaaaataa 356  Q
    |||||||||||||| |||||||||    
T  29911581 aaatagtctctaacgttaaaataa 29911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 7681066 - 7680992
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| |||||||||||||||| ||| |||||  | || |||||||||||| ||| |||||||||||||||    
T  7681066 tcaatgtatcaaaattttaaaatagtatttgattgtgcatttcgttagtcaaaatcgtccctaacattaaaataa 7680992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 41302629 - 41302706
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||| |||||| |   |||||||  |||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  41302629 ggtaatagttattttggtatatgaatgtgtaacgagtaatcacaatagtctttcaaagtattaaaattttaaaatagt 41302706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 2987251 - 2987176
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||||||| ||| | ||||| |||||| |||||| |||||| | ||||||||| ||||||||||||||||    
T  2987251 gtaatagtcattttggttcctaaatgtgaaacgattagtcacaatagt-tctcaatgtatcaaaattttaaaatagt 2987176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 7604001 - 7603953
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  7604001 gactattttgaccaacgaagtgcacaatcaaaaattattttaaaatttt 7603953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 18451837 - 18451908
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    ||||||||||| | ||| ||||||| |||||||||||||| ||||| |||||| ||| ||||||| ||||||    
T  18451837 tagtcataataatatttaaatgtatcaaaattttaaaataattttttattgtagaatctgttagttaaaata 18451908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 19793605 - 19793534
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||| |||||||||||||||| | ||||||||  ||||||||||||||  ||||||| || ||||||||    
T  19793605 aatgtatcaaaattttaaaatagtgtataattgtacgatttgttagtcaaataagtctcttacgttaaaata 19793534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 337
Target Start/End: Complemental strand, 30135761 - 30135695
Alignment:
Q  271 ataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    |||||||| ||| ||| ||| ||||||| |||||||| |||| ||||||||| ||||||||||||||    
T  30135761 ataatagttttttaatctatcaaaatttaaaaatagtgtttatttgtataatctgttagtcaaaata 30135695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 44362699 - 44362637
Alignment:
Q  293 aaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||| | ||||| ||||| ||||||||||||||||| |||  ||||||||    
T  44362699 aaattttaaaatagtttctgattgtgtaattcgttagtcaaaatagtctataatgttaaaata 44362637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 40680024 - 40680109
Alignment:
Q  224 ttaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagttt 309  Q
    ||||| ||||||| ||||||||||  |||||| |  || ||||||  |||||||||||| ||||||| |||||| |||||||||||    
T  40680024 ttaagcggtaataatcattttgatatgtgaatatgcaatgagtagcaataatagtcttttaatgtatcaaaattctaaaatagttt 40680109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 550
Target Start/End: Original strand, 6394074 - 6394141
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    |||||||| |||||||||||||||||||    || | |||||||||||||||  ||||||||||||||    
T  6394074 gactatttcgattaacaaagtgcacaatttggaactgttttaaaattttaatacattgagagattatt 6394141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 530
Target Start/End: Original strand, 9598069 - 9598116
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||||||||||  ||||||| |||||||||||||||||| ||||    
T  9598069 gactattttgattaatgaagtgcataatcaaaaattattttaagattt 9598116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 531
Target Start/End: Original strand, 12125868 - 12125931
Alignment:
Q  468 tattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||| | ||||||| |||||||| |||||||||||||  ||| ||| ||||||||||||||    
T  12125868 tattttaatgttattgattattttgactaacaaagtgcaccgtcataaactattttaaaatttt 12125931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 2988120 - 2988166
Alignment:
Q  292 aaaattttaaaatagtttttaattgtataatttgttagtcaaaatag 338  Q
    |||||||||||||||| ||||||||| ||||| |||| |||||||||    
T  2988120 aaaattttaaaatagtgtttaattgtgtaattcgttaatcaaaatag 2988166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 3662354 - 3662440
Alignment:
Q  270 cataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||||  ||||||||| ||||||||||||||||| || |||||  |  ||| | |||||| ||||| ||| |||||||||||    
T  3662354 cataatagtccctcaatgtatcaaaattttaaaatagttcttgattgtgcacattgcttgtcaaattagtccctagcattaaaataa 3662440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 534
Target Start/End: Complemental strand, 4971502 - 4971452
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    |||||||| ||||||| |||||||||||| ||| ||||||| |||||||||    
T  4971502 actattttaattaacagagtgcacaatcataaactattttagaattttaat 4971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 1249090 - 1249170
Alignment:
Q  227 agaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtt 308  Q
    |||||||||||||||||| | || ||||| |  ||||| || |||||||||||| | ||| |||||||||| ||||||||||    
T  1249090 agaggtaatagtcatttt-agtcatgaatatgtaacgaataatcataatagtctcttaatctattaaaattctaaaatagtt 1249170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 1648475 - 1648410
Alignment:
Q  275 tagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||| ||||||||||||||||||||||| ||  ||||  | | ||||||||| |||||||||    
T  1648475 tagtcttttaatgtattaaaattttaaaatagcttcaaattaaacattttgttagttaaaatagtc 1648410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 4971449 - 4971529
Alignment:
Q  286 tgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataacatttcaatgt 367  Q
    |||||||||||| ||||||||||| | |||||  | | ||||| | |||||||| ||||||| |||||||| ||||||||||    
T  4971449 tgtattaaaattctaaaatagtttatgattgtgcactctgttaattaaaatagt-tctaacactaaaataatatttcaatgt 4971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Complemental strand, 8340170 - 8340125
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaat 528  Q
    |||||| |||| ||||| |||||||||||||||| |||||||||||    
T  8340170 gactatcttgactaacatagtgcacaatcaaaaactattttaaaat 8340125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 8340411 - 8340346
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaatt 297  Q
    |||||||||||||| ||| |||||||| || ||||||||| || |||| || ||||||| ||||||    
T  8340411 taatagtcattttggttcttgaatgtataatgagtagtcacaacagtcctttaatgtatcaaaatt 8340346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 21145418 - 21145491
Alignment:
Q  281 ttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||||| || |||||| |||||||||  |||||||  | | |||||||||||||||||||| || |||||||    
T  21145418 ttcaatgttttgaaatttcaaaatagttcataattgtgcactatgttagtcaaaatagtctcttacgttaaaat 21145491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 531
Target Start/End: Original strand, 41303109 - 41303197
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattg--actattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||| |||| |||||||||| ||||||| | |||| |  |||||||||| || ||||||||| ||||||  | ||||||||||||||    
T  41303109 ctaatatgacaatattaacaaattattttaatgttatcgggactattttgactagcaaagtgcataatcaatgactattttaaaatttt 41303197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 530
Target Start/End: Original strand, 44362614 - 44362699
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||| | |||||||||  || |||||||  ||||| ||||||||||| |||| || | |||||||| ||| |||||||||||||    
T  44362614 ctaatatgtcagtattaatgaaatattttaacattatagactattttgactaacgaattacacaatcagaaactattttaaaattt 44362699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 6394153 - 6394073
Alignment:
Q  261 acgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    |||||| |||| |||| ||| |||||||||||||||||||||| ||||   ||||||  | ||||||| || |||||||||    
T  6394153 acgagtggtcacaataatctctcaatgtattaaaattttaaaacagttccaaattgtgcactttgttaatcgaaatagtct 6394073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 7604155 - 7604207
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaat-tattttaaaattttaat 534  Q
    ||||||||||||||  ||| |||||||| |||||| |||||||||||||||||    
T  7604155 gactattttgattattaaaatgcacaataaaaaatctattttaaaattttaat 7604207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 7680856 - 7680936
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||| ||| |||| ||| ||||| ||||||||||| |||||||||| | ||| | || ||||||| ||| |||||||    
T  7680856 aacgagtaatcacaatactctctcaatatattaaaatttaaaaatagtttctgattttgtactttgttactcataatagtc 7680936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 8982377 - 8982301
Alignment:
Q  229 aggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaata 305  Q
    ||||||||||||||||  ||  |||||||| || || |||||| |||||| | || |||||| ||||||||||||||    
T  8982377 aggtaatagtcatttttgtttctgaatgtataatgattagtcacaatagtttctcgatgtatcaaaattttaaaata 8982301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 10029051 - 10029007
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaat 304  Q
    |||||||||| | ||||||| |||||||||| |||||||||||||    
T  10029051 aacgagtagttacaatagtcattcaatgtatcaaaattttaaaat 10029007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 18080445 - 18080493
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||| | ||||| |||||||||||||||| |||||| |||||||    
T  18080445 gactattttcaataacatagtgcacaatcaaaaaatattttgaaatttt 18080493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 33590133 - 33590201
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    |||||||| |||||||||||||||| ||||||||||  | ||| |  | |||||||||||| |||||||    
T  33590133 aatagtctctcaatgtattaaaattgtaaaatagttcatgattttgcactttgttagtcaatatagtct 33590201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 271 - 356
Target Start/End: Complemental strand, 41303218 - 41303131
Alignment:
Q  271 ataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctc--taacattaaaataa 356  Q
    |||||||||  ||||||||| ||||||||||||||||  || ||| |  | |||| |||||||||||||| |  ||||||||||||||    
T  41303218 ataatagtccctcaatgtatcaaaattttaaaatagtcattgattatgcactttgctagtcaaaatagtcccgataacattaaaataa 41303131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 339
Target Start/End: Original strand, 42844831 - 42844939
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||||| | | | |||| ||||| | |||| ||| ||| |||||||||| ||||||||  |||||  ||| |||||| | ||  |||||    
T  42844831 gtaatagtcattttgatccataattgtataacgattggtcacaattgtccttcaatgtatcaaaattttcgaataggctttgattgtacacttaattagt 42844930  T
Q  331 caaaatagt 339  Q
    |||||||||    
T  42844931 caaaatagt 42844939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 224 - 343
Target Start/End: Complemental strand, 6788600 - 6788481
Alignment:
Q  224 ttaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatt 323  Q
    ||||||||||||||||||||| || | | |||||  ||| | |||||||||||||| |||||||||| |||||||||||||||||| | |||||  | ||    
T  6788600 ttaagaggtaatagtcattttcatccttaaatgtgtaacaaatagtcataatagtcattcaatgtatcaaaattttaaaatagtttctgattgtgcactt 6788501  T
Q  324 tgttagtcaaaatagtctct 343  Q
    ||||||||| ||||||||||    
T  6788500 tgttagtcagaatagtctct 6788481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 7165824 - 7165777
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  7165824 aacgagtagtcacaatagtctttcaatgtattaaaattttaaaatagt 7165777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 255 - 355
Target Start/End: Original strand, 20167392 - 20167492
Alignment:
Q  255 tgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||| |||| |||||| |||| || |||||| |||| |||||||||||||||| || || ||| |  ||||||||||||| ||||||| ||||||||||    
T  20167392 tgtaacacgattagtcacaataatccttcaatctattgaaattttaaaatagttattgatcgtagatattgttagtcaaaacagtctctgacattaaaat 20167491  T
Q  355 a 355  Q
    |    
T  20167492 a 20167492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 285 - 355
Target Start/End: Original strand, 43191794 - 43191864
Alignment:
Q  285 atgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||| |||||||||||||||||||| ||| |||| |||||||||||||| ||| | ||| |||||||||    
T  43191794 atgtatcaaaattttaaaatagtttttgattatatactttgttagtcaaaaaagtttttaatattaaaata 43191864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 495 - 543
Target Start/End: Complemental strand, 6686832 - 6686784
Alignment:
Q  495 taacaaagtgcacaatcaaaaattattttaaaattttaatgtattgaga 543  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||||    
T  6686832 taacaaagtgcacaatcaaaaactattttaaaattttgatatattgaga 6686784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 20966262 - 20966198
Alignment:
Q  292 aaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||||||||| ||| |||||  | ||||||||||||||||||||| ||||||| |||||    
T  20966262 aaaattttaaaatagtctttgattgtgcactttgttagtcaaaatagtctccaacattagaataa 20966198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 20966214 - 20966262
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  20966214 gactattttgactaacaaagtgcacaatcaaagactattttaaaatttt 20966262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 6686737 - 6686836
Alignment:
Q  233 aatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtca 332  Q
    ||||||||||||  ||  |||||||| | | |||||||| |||||| | ||||| ||| |||||||||||||||||||| |||||  | |||||||||||    
T  6686737 aatagtcattttagttgatgaatgtatagcaagtagtcaaaatagtttctcaatatatcaaaattttaaaatagtttttgattgtgcactttgttagtca 6686836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 7165601 - 7165688
Alignment:
Q  270 cataatagtctttcaatgtattaaaattttaaaa-tagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||||| | ||||||||||| |||||||| ||||| || |||||  | ||| |||||||||||||||  ||||||||||||||    
T  7165601 cataatagtctcttaatgtattaaatttttaaaaatagttcttgattgtgcactttattagtcaaaatagtccttaacattaaaataa 7165688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 34883934 - 34884009
Alignment:
Q  268 gtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    |||| |||||||  ||||||||| |||||||||||||||| | |||||||  | | ||||||||||||||||||||    
T  34883934 gtcacaatagtccctcaatgtatcaaaattttaaaatagtctctaattgtgcactctgttagtcaaaatagtctct 34884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 43503080 - 43503033
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||    
T  43503080 aacgagtagttacaatagtttttcaatgtattaaaattttaaaatagt 43503033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 531
Target Start/End: Complemental strand, 11147891 - 11147849
Alignment:
Q  489 tttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  11147891 tttgattaacaaaatgcacagtcaaaaattattttaaaatttt 11147849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 13478769 - 13478835
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    |||||||||| ||| ||| |||||||||||||| |||||||||||||| || |||| | ||||||||    
T  13478769 actattttgactaataaaatgcacaatcaaaaactattttaaaattttgatatattcaaagattatt 13478835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 356
Target Start/End: Complemental strand, 20167704 - 20167574
Alignment:
Q  226 aagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttg 325  Q
    |||||||||||||||||||| |   | |||||  ||| |||||||| |||||||  |||||| || ||||||  |||||| |   | |||||| | ||||    
T  20167704 aagaggtaatagtcattttggtctttaaatgtgtaacaagtagtcacaatagtcactcaatgcatcaaaattgcaaaatattccctgattgtacactttg 20167605  T
Q  326 ttagtcaaaatagtctctaacattaaaataa 356  Q
    |||| ||||||||||||| ||||||||||||    
T  20167604 ttagacaaaatagtctctgacattaaaataa 20167574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 20966044 - 20966090
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatag 306  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||    
T  20966044 aacgagtagtgataatagtctctcaatctattaaaattttaaaatag 20966090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 19206574 - 19206497
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||||| |||||| || ||||||| |||||||||||||||||| | ||| |  | |||||||||||||||| |||||    
T  19206574 tagtcatgatagtcctttaatgtatcaaaattttaaaatagtttctgattatgcactttgttagtcaaaatattctct 19206497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 6788484 - 6788532
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||| ||| |||||||||||||||||| ||| ||||||||||||||    
T  6788484 gactattctgactaacaaagtgcacaatcagaaactattttaaaatttt 6788532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 7165698 - 7165599
Alignment:
Q  457 tattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaatta-ttttaaaattttaatgtattgagagattattctggt 555  Q
    |||||||||| ||||||| | |||  ||||||||||| ||| ||||||||||||||| || || |||||||| ||||||  ||| ||||| |||| ||||    
T  7165698 tattaacaaattattttaatgttaaggactattttgactaataaagtgcacaatcaagaactatttttaaaaatttaatacattaagagactattatggt 7165599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 23359371 - 23359466
Alignment:
Q  260 aacgagtagtcataatagtctttcaat-gtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||| |||||| ||||||| |||||| ||||| ||||| ||| ||||| | | ||||| || |  |||||||||||||||||||||| |||||||    
T  23359371 aacgaatagtcacaatagtccttcaattgtattgaaattataatatagtctatgattgtgtactacgttagtcaaaatagtctctaacgttaaaat 23359466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 13478835 - 13478769
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||| ||||| ||| ||| |||||||||||||||||||| |||||  | ||| ||||||||||||||    
T  13478835 aataatctttgaatatatcaaaattttaaaatagtttttgattgtgcattttattagtcaaaatagt 13478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 530
Target Start/End: Original strand, 18903136 - 18903214
Alignment:
Q  452 gacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||| |||||| || ||||||  ||||  ||| ||||||||||||| |||||||||||| ||| ||||||| |||||    
T  18903136 gacagtgttaacagagcattttaacattaaagaccattttgattaacatagtgcacaatcagaaactattttagaattt 18903214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 18903247 - 18903153
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    |||||||||||| ||||||| ||||||||||  ||||| ||||||||||| | |||||  | | ||||| ||||||| |||| |||  |||||||    
T  18903247 aacgagtagtcacaatagtcattcaatgtatcgaaattctaaaatagtttctgattgtgcactatgttaatcaaaatggtctttaatgttaaaat 18903153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 25765365 - 25765427
Alignment:
Q  293 aaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||| ||||||||||||| ||| | ||  |  ||||||||||||||||||||||||||||||    
T  25765365 aaattataaaatagttttttattatgtatctctttagtcaaaatagtctctaacattaaaata 25765427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 530
Target Start/End: Complemental strand, 29926753 - 29926707
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||| ||||||| |||| ||||||||||| |||||||||||||    
T  29926753 actattttaattaacatagtgtacaatcaaaaactattttaaaattt 29926707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 35150389 - 35150470
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||| |||||| || |||||||||||||||||||| | |||  ||||| |  ||||||||||||||| || ||||||||    
T  35150389 aatagtctctcaatgcatcaaaattttaaaatagtttttga-tgtgcaatttatcggtcaaaatagtctctgacgttaaaata 35150470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 41746407 - 41746449
Alignment:
Q  313 attgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||| || |||| ||||||||||||||||||||||||||    
T  41746407 attgtatacttcgttattcaaaatagtctctaacattaaaata 41746449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 41746580 - 41746538
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtt 308  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||    
T  41746580 tagtcataatagtctctcaatgtatttaaattctaaaatagtt 41746538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 9471865 - 9471824
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  9471865 tagtcataatagttttttaatgtattaaaattctaaaatagt 9471824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 19206503 - 19206548
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||| |||||||||||| ||||| ||| ||||||||||||||    
T  19206503 tattttgactaacaaagtgcataatcagaaactattttaaaatttt 19206548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 550
Target Start/End: Complemental strand, 20966122 - 20966057
Alignment:
Q  485 ctattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    ||||||||| |||||||||||| ||||| |   |||||||||||||||||  ||||||||| ||||    
T  20966122 ctattttgactaacaaagtgcaaaatcataggctattttaaaattttaatagattgagagactatt 20966057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 23359687 - 23359622
Alignment:
Q  274 atagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    ||||||| |||||||||| |||||| ||||||||  || |||||||| | |||| |||||||||||    
T  23359687 atagtctatcaatgtattgaaatttcaaaatagtcattgattgtatactatgttggtcaaaatagt 23359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 41444679 - 41444752
Alignment:
Q  268 gtcataatagtctttcaatgtatt-aaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||||||| ||||||||||| ||||||  ||||||||| || |||||  | || ||||||||||||||||    
T  41444679 gtcataatagtccttcaatgtattgaaaattcaaaaatagttattgattgtgaacttcgttagtcaaaatagtc 41444752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 18857990 - 18858074
Alignment:
Q  253 aatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    |||||| |||||||||||  |||||||||| ||| |||  |||||||||||||| || | ||||| ||   ||||||||||||||    
T  18857990 aatgtataacgagtagtcgcaatagtcttttaatatatcgaaattttaaaatagattatgattgtgtacactgttagtcaaaata 18858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 21603751 - 21603675
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||| ||||||| ||| | |||| ||||||| ||||||||  || |||||  | |||||||||||||||||||    
T  21603751 agtagtcacaatagtccttcgacgtatcaaaatttcaaaatagtccttgattgtccactttgttagtcaaaatagtc 21603675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 29488706 - 29488742
Alignment:
Q  281 ttcaatgtattaaaattttaaaatagtttttaattgt 317  Q
    |||||||||| |||||||||||||||||||| |||||    
T  29488706 ttcaatgtatcaaaattttaaaatagtttttgattgt 29488742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 39608656 - 39608582
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    ||||||| | |||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  39608656 gagtagttacaatagtttttcaatgtatcaaaattttaaaatagttttgaattgtacaatttgttagtcaaaata 39608582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 231 - 355
Target Start/End: Original strand, 34703628 - 34703751
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||||| | | |||||| |||||||||||| |||||||  |||||||| | ||||||||||||||| | |||||||  | || |||  |    
T  34703628 gtaatagtcattttgatccataaatgtataacgagtagtcacaatagtccatcaatgta-tcaaattttaaaatagtctctaattgttcacttcgttgat 34703726  T
Q  331 caaaatagtctctaacattaaaata 355  Q
    |||||||||||||||| ||||||||    
T  34703727 caaaatagtctctaactttaaaata 34703751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 8062978 - 8062901
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||| |||||| | | |||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  8062978 ggtaatagttattttggtccttgaatgtgtaacgagtagtcacaatagtctgtcaatgtattaaaattttaaaatagt 8062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 46720125 - 46720016
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||||||||| || ||| |||||| | ||| |||||||| |||||||  |||||||||| |||||||||||| || ||| |||||  | ||||||||    
T  46720125 ggtaatagtcattatggttcctgaatgaataacaagtagtcacaatagtccctcaatgtattgaaattttaaaatggtatttgattgtgcactttgttag 46720026  T
Q  330 tcaaaatagt 339  Q
    ||||||||||    
T  46720025 tcaaaatagt 46720016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 18942730 - 18942861
Alignment:
Q  225 taagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaat--tgtataat 322  Q
    |||| |||||||||||||||| | | |||||||  || || ||||||||||||||  ||||||||| |||||||||||||| | ||| ||  |||  | |    
T  18942730 taaggggtaatagtcattttggtccctgaatgtgtaaggaatagtcataatagtcactcaatgtatcaaaattttaaaata-tctttgatcatgtgcatt 18942828  T
Q  323 ttgttagtcaaaatagtctctaacattaaaata 355  Q
    | ||||||| |||||||||||||||||||||||    
T  18942829 tcgttagtccaaatagtctctaacattaaaata 18942861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 8929495 - 8929559
Alignment:
Q  276 agtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    ||||||| |||||||||||||||||||||||||||| ||| |  | |||||||||||||||||||    
T  8929495 agtcttttaatgtattaaaattttaaaatagtttttgattttgcactttgttagtcaaaatagtc 8929559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 338
Target Start/End: Complemental strand, 38838754 - 38838646
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||| | |||||| | | |||||||  |||||||||||| |||| ||| |||||||||||||||||||||||||| | | ||| |  | ||||||||    
T  38838754 ggtaataattattttggtccctgaatgtgtaacgagtagtcacaatattctatcaatgtattaaaattttaaaatagtctctgattttgcattttgttag 38838655  T
Q  330 tcaaaatag 338  Q
    |||||||||    
T  38838654 tcaaaatag 38838646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 40077727 - 40077648
Alignment:
Q  275 tagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||| |||||||||||||| |||||||||| | | |||||||||| ||| ||| | ||||||||||||||||||||||||    
T  40077727 tagtcattcaatgtattaaa-ttttaaaataatatctaattgtatattttattaattaaaatagtctctaacattaaaata 40077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 8929559 - 8929508
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  8929559 gactattttgactaacaaagtgcaaaatcaaaaactattttaaaattttaat 8929508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 530
Target Start/End: Original strand, 23457814 - 23457860
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||||||||||||||||||||||||| || |||||||||||||    
T  23457814 actattttgattaacaaagtgcacaatcaataactattttaaaattt 23457860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 25618265 - 25618160
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    ||||||| | |||||| ||| |||||||  ||||| |||||| | |||| || ||||||||||||||||||||||||||| | ||| |  | ||||||||    
T  25618265 ggtaataattattttggttcttgaatgtgtaacgattagtcacagtagttttgcaatgtattaaaattttaaaatagtttatgattttgcattttgttag 25618166  T
Q  330 tcaaaa 335  Q
    ||||||    
T  25618165 tcaaaa 25618160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 29197160 - 29197213
Alignment:
Q  489 tttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgag 542  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||    
T  29197160 tttgattaacagagtgcacaatcaaaaactattttaaaattttgatgcattgag 29197213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 533
Target Start/End: Complemental strand, 38838599 - 38838523
Alignment:
Q  457 tattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaa 533  Q
    |||||||||| ||||||| |||||  ||||||||||| ||  |||||||||||||||  | ||||||||||||||||    
T  38838599 tattaacaaattattttaatattagggactattttgactagaaaagtgcacaatcaaggactattttaaaattttaa 38838523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 23474614 - 23474567
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||    
T  23474614 actattttgattaacgaagtgcacaatcaataactattttaaaatttt 23474567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 550
Target Start/End: Complemental strand, 25689063 - 25688996
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    ||||||||| | |||||||||||| ||||| ||||||||||| |||||||||  ||||||||| ||||    
T  25689063 gactattttaactaacaaagtgcaaaatcagaaattattttagaattttaatacattgagagactatt 25688996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 542
Target Start/End: Original strand, 32996500 - 32996559
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgag 542  Q
    |||||||||||||||||||||||||||||| | | ||||||| |||||| ||| ||||||    
T  32996500 gactattttgattaacaaagtgcacaatcagagactattttagaattttgatgcattgag 32996559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 530
Target Start/End: Complemental strand, 23441560 - 23441514
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||    
T  23441560 actattttgattaacgaagtgcacaatcaataactattttaaaattt 23441514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 23457888 - 23457814
Alignment:
Q  265 gtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||| |||||||||| ||||||||||  |||||||||||||||| || |||||  | ||||||| ||||||||||    
T  23457888 gtagccataatagtccttcaatgtatcgaaattttaaaatagttattgattgtgcactttgttaatcaaaatagt 23457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 23474540 - 23474614
Alignment:
Q  265 gtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||| |||||||||| |||||||||| ||||||||||||||||| || |||||  | || |||| ||||||||||    
T  23474540 gtagccataatagtccttcaatgtatcaaaattttaaaatagttattgattgtgcacttcgttaatcaaaatagt 23474614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 24127152 - 24127262
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||||||| ||| |||||  |||||| || || |||||||  |||||||||| ||||| ||||| |||| || |||||  |  | |||||    
T  24127152 ggtaatagtcattttgatccgtaaatgtgcaacgagcaggcacaatagtccatcaatgtattgaaattctaaaaaagttcttgattgtgcacctcgttag 24127251  T
Q  330 tcaaaatagtc 340  Q
    |||||||||||    
T  24127252 tcaaaatagtc 24127262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 40089905 - 40089823
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||| ||||| ||||||| |||| | | ||||||||||| |||||||| ||| | ||| |||||||||||||||| |||||||    
T  40089905 aataatcttttaatgtatcaaaactatcaaatagtttttgattgtatattttatcagttaaaatagtctctaacaataaaata 40089823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 3117132 - 3117055
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||| ||||||||  || |||||||||||||||||||||||   |||||||  | |||| |||||||||||||||||    
T  3117132 tagtcttaatagtccctcgatgtattaaaattttaaaatagtccctaattgttcactttgctagtcaaaatagtctct 3117055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 452 - 513
Target Start/End: Complemental strand, 12927712 - 12927651
Alignment:
Q  452 gacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaa 513  Q
    |||| |||||||||| ||||||| ||| |  ||||||||||| |||||||||||||||||||    
T  12927712 gacaatattaacaaaatattttaatatgaaggactattttgactaacaaagtgcacaatcaa 12927651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 30840007 - 30839894
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    |||||||||||||| | | |||||||| ||||| |||| | |||||||| |||||||| || || |||||||||||   | ||| || | ||| |||||     
T  30840007 taatagtcattttggtccctgaatgtataacgaatagttacaatagtctctcaatgtaatataaatttaaaatagtccctgattttaaattttattagtt 30839908  T
Q  332 aaaatagtctctaa 345  Q
    ||||||||||||||    
T  30839907 aaaatagtctctaa 30839894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 42336840 - 42336889
Alignment:
Q  253 aatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaa 302  Q
    |||||| || |||||||||||||||||||| ||||||| |||||||||||    
T  42336840 aatgtataaagagtagtcataatagtcttttaatgtatcaaaattttaaa 42336889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 1052432 - 1052500
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaa 352  Q
    ||||||| ||||||||||||||||| |||||| || | |  |||| ||||||| |||||||||||||||    
T  1052432 aatgtatcaaaattttaaaatagttcttaattatacactacgttactcaaaattgtctctaacattaaa 1052500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 25688963 - 25689063
Alignment:
Q  240 attttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||||||||| |||||||  || || || ||| |||||||| |||||||||||||||| ||||||| ||| | ||| |  | ||||||||| ||||||||    
T  25688963 attttgattcttgaatgtgtaatgaataatcacaatagtctctcaatgtattaaaattctaaaataatttctgattttgcactttgttagttaaaatagt 25689062  T
Q  340 c 340  Q
    |    
T  25689063 c 25689063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 29196781 - 29196866
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaata----gtttttaattgtataatttgttagtcaaaatagtct 341  Q
    ||||| |||||| |||||| ||||||||||| ||||||||||||||    || | ||||||| || ||| ||||||||||||||||    
T  29196781 aacgaatagtcacaatagtttttcaatgtatcaaaattttaaaatatatagtctctaattgtgtactttattagtcaaaatagtct 29196866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 1247526 - 1247573
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||| |||||| | | ||||||||||||||||||||||||    
T  1247526 aacgagtagtcacaatagtttcttaatgtattaaaattttaaaatagt 1247573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 531
Target Start/End: Complemental strand, 8062837 - 8062753
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||| |||| |||||||||| ||||||| | |||| ||||||||||| || |||||||  |||||||  | ||||||||||||||    
T  8062837 ctaatatgacaatattaacaaattattttaatgttatggactattttgactagcaaagtg--caatcaatgactattttaaaatttt 8062753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 3116847 - 3116901
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaat 336  Q
    ||||| ||| |||||||||||||||||||||| |||  | |||||||||||||||    
T  3116847 tcaatatatcaaaattttaaaatagtttttaaatgtgcattttgttagtcaaaat 3116901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 5358248 - 5358314
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    ||||||| |||||||||| |||||||||||||||| | | ||||| || | | ||||||||||||||    
T  5358248 aatagtccttcaatgtatcaaaattttaaaatagtctctgattgtgtactctattagtcaaaatagt 5358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 5362305 - 5362367
Alignment:
Q  293 aaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||| |||||||||  | ||||| |||||||||||||||||||||| || | |||||||||    
T  5362305 aaatttcaaaatagttcatgattgtgtaatttgttagtcaaaatagtccctgatattaaaata 5362367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 23441486 - 23441560
Alignment:
Q  265 gtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||| |||||||||| ||||||||||  |||||||||||||||| || |||||  | || |||| ||||||||||    
T  23441486 gtagccataatagtccttcaatgtatcgaaattttaaaatagttattgattgtgcacttcgttaatcaaaatagt 23441560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 530
Target Start/End: Complemental strand, 23532952 - 23532906
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||    
T  23532952 actattttgattaacgaagtccacaatcaataactattttaaaattt 23532906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 30793193 - 30793131
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaac 346  Q
    |||||||| ||||||||||||||||||||||||  || ||   |||| |||||||||||||||    
T  30793193 aatgtattgaaattttaaaatagtttttaattgagtacttcagtagttaaaatagtctctaac 30793131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 430
Target Start/End: Complemental strand, 32996412 - 32996370
Alignment:
Q  388 atatgataataaaaatgtatattgaaggactaatacgacaata 430  Q
    ||||||||||||| | ||||||||||||||||||| |||||||    
T  32996412 atatgataataaataagtatattgaaggactaatatgacaata 32996370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 43576542 - 43576461
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaa 345  Q
    |||||| ||||||||| ||| ||||||||||||||| ||||||||| || |||||  |||  |||| ||||||| ||||||||    
T  43576542 gagtagacataatagttttt-aatgtattaaaatttaaaaatagttgttgattgtgcaatacgttaatcaaaatcgtctctaa 43576461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 46719876 - 46719826
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaa 533  Q
    ||||||||||||||||| | |||||||||| ||| |||||| |||||||||    
T  46719876 gactattttgattaacataatgcacaatcagaaactattttgaaattttaa 46719826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 530
Target Start/End: Original strand, 46720016 - 46720062
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||    
T  46720016 actattttgactaacaaagtgcacaatcaaataccattttaaaattt 46720062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 24325386 - 24325462
Alignment:
Q  280 tttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt--caaaatagtctctaacattaaaat 354  Q
    |||||| |||| ||||||| |||||||||||| |||||  |||||||||||   |||||||||||||| ||| ||||    
T  24325386 tttcaacgtataaaaatttcaaaatagtttttgattgtgcaatttgttagtaaaaaaatagtctctaatattgaaat 24325462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 5197953 - 5198009
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    ||||||||| |||||||||||||||| | ||| |  | |||||||||||||||||||    
T  5197953 aatgtattagaattttaaaatagtttctcattttgcactttgttagtcaaaatagtc 5198009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 5362511 - 5362467
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||    
T  5362511 gagtagtcacaataatcattcaatgtatcaaaattttaaaatagt 5362467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 30839790 - 30839834
Alignment:
Q  310 ttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||    
T  30839790 ttaattgtatattttgttaatcaaaatagtttataacattaaaat 30839834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 25085046 - 25085131
Alignment:
Q  446 taatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||| |||| |||||||||| ||||||| | |||  ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  25085046 taatatgacaatattaacaaattattttaatgttaaagactattttgactaacaaagtgcacaatcaaaaagtattttaaaatttt 25085131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 224 - 341
Target Start/End: Original strand, 21020843 - 21020960
Alignment:
Q  224 ttaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatt 323  Q
    ||||| |||||||||||||||| | | ||||| || |||||||| | ||||||||||||| |||||| ||||||||||||||||  |  ||| || | ||    
T  21020843 ttaaggggtaatagtcattttggtccctgaatatataacgagtaattataatagtctttcgatgtatcaaaattttaaaatagtcatcgattatacattt 21020942  T
Q  324 tgttagtcaaaatagtct 341  Q
    | ||||||||||||||||    
T  21020943 ttttagtcaaaatagtct 21020960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 356
Target Start/End: Complemental strand, 25085160 - 25085067
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||| ||||||||||   | ||||||| |||||||||||||| ||||| |||||  | |||||||||||||||||||| ||||||||||||||    
T  25085160 gagtaatcataatagtaccttaatgtatcaaaattttaaaatactttttgattgtgcactttgttagtcaaaatagtctttaacattaaaataa 25085067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 10067786 - 10067704
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||| |||||||||  ||||||||||||||| | | ||||| || ||||||| |||||||||||||| |||||||||||    
T  10067786 aatagtctctcaatgtatcgaaattttaaaatagtctctgattgtgtattttgttaatcaaaatagtctctgacattaaaata 10067704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 25084898 - 25084986
Alignment:
Q  227 agaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaatt 315  Q
    |||| ||||||| |||||| | | || ||||| |||||||||| |||||||||| | |||||||||||||||| ||||||| |||||||    
T  25084898 agagataatagttattttggtccttggatgtataacgagtagttataatagtctcttaatgtattaaaatttttaaatagtctttaatt 25084986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 34937900 - 34937852
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  34937900 gactattttgattaacaaagtacacaatcaaaaattattttgaaatttt 34937852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 445 - 555
Target Start/End: Original strand, 10067681 - 10067791
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagag 544  Q
    |||||| |||| |||||||||||||||||| | | |  ||||||||||||||||||| | |||||||| | | |||||||||||||  ||  ||||||||    
T  10067681 ctaatatgacaatattaacaaagtattttaatgtcagagactattttgattaacaaaatacacaatcagagactattttaaaatttcgatacattgagag 10067780  T
Q  545 attattctggt 555  Q
    | |||| ||||    
T  10067781 actattgtggt 10067791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 6524842 - 6524919
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||| ||||||| | | |||||||  ||  ||||||||||||||||| |||||||||||||||| |||||||||    
T  6524842 ggtaatagccattttggtccatgaatgtgtaataagtagtcataatagtctctcaatgtattaaaattctaaaatagt 6524919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 356
Target Start/End: Original strand, 10219536 - 10219661
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||| | | |||||||  ||||||||| || |||||||  | ||||| |  |||||| |||||||||  | |||||  | |||||||||    
T  10219536 gtaatagtcattttggtccctgaatgtgtaacgagtagccacaatagtcccttaatgtgtcgaaatttcaaaatagttcctgattgtgcactttgttagt 10219635  T
Q  331 caaaatagtctctaacattaaaataa 356  Q
    ||||||||||||| || |||||||||    
T  10219636 caaaatagtctctgacgttaaaataa 10219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 17848903 - 17848811
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||| |||||||| |  ||||||||| |||||||||||||| |||   |||||  | || ||||||||||||||||| |||||||||||||    
T  17848903 gagtagacataatagacactcaatgtatcaaaattttaaaataatttcagattgtgcatttcgttagtcaaaatagtctttaacattaaaata 17848811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 33806681 - 33806773
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||| |||| || || |||||||  ||||| |||||||||  || ||| | || ||||||||||||||||||||||||| ||||||||    
T  33806681 gagtagtcacaataatcctttaatgtatcgaaattctaaaatagtcattgattatgtactttgttagtcaaaatagtctctaacgttaaaata 33806773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 21237189 - 21237232
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  21237189 agtagtcataatagtctctcaatgtattaaaattctaaaatagt 21237232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 531
Target Start/End: Original strand, 17848800 - 17848874
Alignment:
Q  457 tattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||| |||||||||| | |||  ||||||||||| |||| || |||||||||  ||||||||||||||||||    
T  17848800 tattaacgaagtattttaatgttaaagactattttgactaacgaaatgcacaatctgaaattattttaaaatttt 17848874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 8161523 - 8161466
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    ||||||||| ||||||  |||||| ||||| |||||||| ||||||||||||||||||    
T  8161523 tcaatgtatcaaaattcaaaaatatttttttattgtatattttgttagtcaaaatagt 8161466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 12291696 - 12291631
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatag 338  Q
    |||||||  |||||||||||||||||||||||||| ||| |||||| | ||||||| | |||||||    
T  12291696 aatagtccctcaatgtattaaaattttaaaatagtctttgattgtacactttgttaattaaaatag 12291631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 12291631 - 12291680
Alignment:
Q  485 ctattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    ||||||| |||||||||||| ||||||||| | |||||||||||||||||    
T  12291631 ctattttaattaacaaagtgtacaatcaaagactattttaaaattttaat 12291680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 24084628 - 24084685
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    ||||||||| |||||||||||||||| ||||| | || | ||||||||||||||||||    
T  24084628 tcaatgtatcaaaattttaaaatagtatttaaatatacactttgttagtcaaaatagt 24084685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 28995595 - 28995518
Alignment:
Q  278 tctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||| || ||||| ||||||||||||| | ||| ||| | || || ||||||||||||||| |||||||||||||||    
T  28995595 tcttttaacgtattgaaattttaaaataatatttgattatttacttcgttagtcaaaatagtttctaacattaaaata 28995518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 31142252 - 31142179
Alignment:
Q  268 gtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    ||||||||||||||| ||| ||| ||||||| |||||||| ||| ||| || | | ||||||||||||||||||    
T  31142252 gtcataatagtcttttaatatatcaaaatttcaaaatagtctttgattctacactctgttagtcaaaatagtct 31142179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 7792053 - 7792121
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    |||||||  ||||||||| ||||||| |||||||||| | | |||| ||||| ||||||||||||||||    
T  7792053 aatagtccctcaatgtatcaaaatttgaaaatagtttatgaatgtacaatttattagtcaaaatagtct 7792121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 20565850 - 20565755
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||||||  |||||||||  || |||||||||||| | | |||||  | || | ||||||||||| ||  |||||||||||||    
T  20565850 aacgagtagtcataatagtccatcaatgtatcgaatttttaaaatagtctctgattgtccacttcgctagtcaaaataatccataacattaaaata 20565755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 21021199 - 21021076
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    ||||||| ||||||||   |||||||  || |||| |||| ||| || ||| || |||| ||||||||||||||||| || ||| |  | ||| ||||||    
T  21021199 taatagttattttgatctctgaatgtgtaatgagtggtcacaatcgttttttaaagtatcaaaattttaaaatagttattgattatgcattttattagtc 21021100  T
Q  332 aaaatagtctctaacattaaaata 355  Q
    |||||||||  |||||||||||||    
T  21021099 aaaatagtcattaacattaaaata 21021076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 353
Target Start/End: Original strand, 23140531 - 23140562
Alignment:
Q  322 tttgttagtcaaaatagtctctaacattaaaa 353  Q
    ||||||||||||||||||||||||||||||||    
T  23140531 tttgttagtcaaaatagtctctaacattaaaa 23140562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 31315336 - 31315266
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||||||||||||||||||| ||| |||||  | | ||||||| ||||||| |||| |||||||||||    
T  31315336 aatgtattaaaattttaaaatagtctttgattgtgcactatgttagt-aaaatagactcttacattaaaata 31315266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 17848688 - 17848754
Alignment:
Q  274 atagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    ||||||| | ||||||||||||||||||| |||||||||||| |  | ||| ||||| |||||||||    
T  17848688 atagtctctaaatgtattaaaattttaaattagtttttaattttgcattttattagtgaaaatagtc 17848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 9307264 - 9307309
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagttttt 311  Q
    |||| |||||||||| | ||||||| ||||||||||||||||||||    
T  9307264 tagtgataatagtctctaaatgtatcaaaattttaaaatagttttt 9307309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Complemental strand, 9307335 - 9307290
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||| ||||||| ||| ||||| ||||||||||||||    
T  9307335 tattttgattaacgaagtgcataataaaaaactattttaaaatttt 9307290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 530
Target Start/End: Original strand, 9436700 - 9436785
Alignment:
Q  445 ctaatacgacagtattaacaaagtattttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||| |||| |||||||||| |||||||  || | |||||||| ||| ||||| ||||||||||||   | |||||||||||||    
T  9436700 ctaatatgacaatattaacaaaatattttaacataaatgactattctgaataacatagtgcacaatcagtgactattttaaaattt 9436785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 530
Target Start/End: Complemental strand, 27223803 - 27223742
Alignment:
Q  469 attttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||| ||  || |||||||||||||| ||||||||||||||  ||||||| ||||||    
T  27223803 attttagtactaaagagtattttgattaacagagtgcacaatcaaatgttattttgaaattt 27223742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 34937841 - 34937902
Alignment:
Q  281 ttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctc 342  Q
    |||| ||||| ||||||| |||||| ||||| ||||| || ||||||| |||||||||||||    
T  34937841 ttcattgtatcaaaatttcaaaataatttttgattgtgtactttgttaatcaaaatagtctc 34937902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 530
Target Start/End: Complemental strand, 2044312 - 2044264
Alignment:
Q  482 tgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||||||||||| || ||||| |||||| |||||||| ||||||    
T  2044312 tgactattttgattaacgaattgcacgatcaaagattattttcaaattt 2044264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 4964351 - 4964319
Alignment:
Q  275 tagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||| |||||||||||||||||||||||||||    
T  4964351 tagtccttcaatgtattaaaattttaaaatagt 4964319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 9762615 - 9762659
Alignment:
Q  487 attttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||| ||| | |||||||||||||||| ||||||||||||||    
T  9762615 attttgactaatatagtgcacaatcaaaaactattttaaaatttt 9762659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 28748120 - 28748036
Alignment:
Q  253 aatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaata 337  Q
    |||||| || || ||||||||| ||| ||| ||| |||||||||||||||||||| | | ||| |  | ||||||||||||||||    
T  28748120 aatgtataatgattagtcataaaagttttttaatatattaaaattttaaaatagtatctgattatgaattttgttagtcaaaata 28748036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 31804015 - 31803967
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||| |||||| |||| || || ||||||||||||||||||||||||||    
T  31804015 gactgttttgactaacgaaatgaacaatcaaaaattattttaaaatttt 31803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 1596 - 1699
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacatta 350  Q
    |||||||| || ||||||||  |||||||||||||||||| |||||||||||||| ||||| |||||  | || ||| ||||||||||||||||| |||     
T  1596 tgaatgtataatgagtagtcggaatagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgttggtcaaaatagtctctaatattg 1695  T
Q  351 aaat 354  Q
    ||||    
T  1696 aaat 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 1685 - 1637
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  1685 gactattttgaccaacgaagtgcacaatcaaaaattattttaaaatttt 1637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 1839 - 1891
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaat-tattttaaaattttaat 534  Q
    ||||||||||||||  ||| |||||||| |||||| |||||||||||||||||    
T  1839 gactattttgattattaaaatgcacaataaaaaatctattttaaaattttaat 1891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 34979221 - 34979159
Alignment:
Q  293 aaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||    
T  34979221 aaattttaaaatagtttttaattgtgcattttgttagtcaaaatagtctctcacattaaaata 34979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 275 - 356
Target Start/End: Complemental strand, 3941874 - 3941793
Alignment:
Q  275 tagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||| || ||||||| ||||||||||||||||  ||||||| | | |||||||||||||||||||||||||||| ||||||    
T  3941874 tagtcctttaatgtatcaaaattttaaaatagtccttaattgaacattttgttagtcaaaatagtctctaacattgaaataa 3941793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 7672570 - 7672498
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||||||| | || | | |||||| | ||||||||||||||||||||||||||||||||||    
T  7672570 tcaatgtattaaaattttaaatt-gtctctgattgtacattttgttagtcaaaatagtctctaacattaaaata 7672498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 31198069 - 31198150
Alignment:
Q  228 gaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagttt 309  Q
    ||||| ||||||||||| |||| |||||||| |||  |||||||||||||||  | ||||||| ||||||| ||||||||||    
T  31198069 gaggtcatagtcattttaattcctgaatgtataacaggtagtcataatagtcactaaatgtatcaaaatttcaaaatagttt 31198150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 4136539 - 4136583
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  4136539 gagtagccataatagtctttcaatatattaaaattttaaaatagt 4136583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 530
Target Start/End: Original strand, 47944546 - 47944594
Alignment:
Q  482 tgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  47944546 tgactattttgattaacgaagtgcacaatcaaagactattttaaaattt 47944594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 30669351 - 30669422
Alignment:
Q  226 aagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaatt 297  Q
    |||||||||||||||||||||| | | |||||  || ||||||||| |||||| | ||||||||||||||||    
T  30669351 aagaggtaatagtcattttgatccctaaatgtgtaaggagtagtcacaatagtatctcaatgtattaaaatt 30669422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 51889755 - 51889822
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaatt 297  Q
    ||||||||||||||||||   |||||||  || ||||||||| |||||||||||||||||| ||||||    
T  51889755 ggtaatagtcattttgatctctgaatgtgtaaggagtagtcacaatagtctttcaatgtatcaaaatt 51889822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 43838488 - 43838546
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||||||||||||||||||||| ||| ||| | || ||||||||||| |||||||    
T  43838488 tcaatgtattaaaattttaaaatagtctttgattttgtactttgttagtcataatagtc 43838546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 21433597 - 21433552
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaatt 529  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||    
T  21433597 actattttgattaacaaagtgcacaatcaataactattttataatt 21433552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 354
Target Start/End: Original strand, 22235228 - 22235309
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||||| || ||||||||||||||| ||||||||   | |||||| | || ||||||||||||||||||| || |||||||    
T  22235228 aatagtccttgaatgtattaaaatttcaaaatagtcgctgattgtacacttcgttagtcaaaatagtctctcacgttaaaat 22235309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 23195800 - 23195755
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaata 305  Q
    |||||||||  | |||||||||||||||||||||||||||||||||    
T  23195800 aacgagtagctacaatagtctttcaatgtattaaaattttaaaata 23195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 30843911 - 30843802
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    |||||||||| |||| ||| |||||||  || ||||||||| |||||||| | ||||||| ||||||  |||||||| | | |||||  | ||||||| |    
T  30843911 gtaatagtcactttggttcctgaatgtgtaatgagtagtcacaatagtctcttaatgtatcaaaattccaaaatagtctctgattgtgcactttgttaat 30843812  T
Q  331 caaaatagtc 340  Q
    ||||||||||    
T  30843811 caaaatagtc 30843802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 40618907 - 40618980
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||||| |||||||||  ||||||| |||||||||||||| |  || |||||  ||||||||||||||||||||    
T  40618907 tagtcacaatagtcttcaaatgtatgaaaattttaaaataatccttgattgtgcaatttgttagtcaaaatagt 40618980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 1182991 - 1183063
Alignment:
Q  271 ataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    |||||||| ||||||||||| ||| ||||||| ||||  || |||||  | ||||||||||||||||||||||    
T  1182991 ataatagtatttcaatgtataaaagttttaaagtagtccttgattgtgcactttgttagtcaaaatagtctct 1183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 530
Target Start/End: Original strand, 22235484 - 22235528
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||    
T  22235484 tattttgactaacaaattgcacaatcaaaaattattttgaaattt 22235528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 43838877 - 43838805
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||| ||||||||||||||||  || |||||  | |||||||||||||||||||| | || |||||||||    
T  43838877 aatgtatcaaaattttaaaatagtcattgattgtgcattttgttagtcaaaatagtctttgacgttaaaataa 43838805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 45906902 - 45906846
Alignment:
Q  300 aaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    |||||||||| ||||||| || ||| |||||||||||| |||||||| |||||||||    
T  45906902 aaaatagtttataattgtgtattttattagtcaaaataatctctaacgttaaaataa 45906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 530
Target Start/End: Complemental strand, 47944388 - 47944344
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||| |||||||||||||||||||| | |||||||||||||    
T  47944388 tattttgactaacaaagtgcacaatcaaagactattttaaaattt 47944344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 621932 - 621856
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    ||||||||||||||||||  |||||||| ||||||| ||||||||   ||| |||  | ||||||||||||||||||||    
T  621932 gagtagtcataatagtct--caatgtatcaaaatttcaaaatagtccctaactgtgcactttgttagtcaaaatagtct 621856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 26483037 - 26483116
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagttttt 311  Q
    |||||||||||||| | | |  ||||| ||||||||| || ||||||| || ||||||| |||||| |||||||||||||    
T  26483037 taatagtcattttggtccttagatgtataacgagtagacacaatagtcatttaatgtatcaaaattctaaaatagttttt 26483116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 530
Target Start/End: Original strand, 34979174 - 34979221
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||||||||    
T  34979174 gactattttgactaacaaaatgcacaattaaaaactattttaaaattt 34979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 40618980 - 40618933
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||| ||||||| |||||||||||  ||||||||||||||||    
T  40618980 actattttgactaacaaattgcacaatcaaggattattttaaaatttt 40618933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 17572059 - 17571997
Alignment:
Q  281 ttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||||||||||||||| ||||||||||| | ||| |  | ||| ||||||||||||||||||    
T  17572059 ttcaatgtattaaaattctaaaatagtttattattctgcattttattagtcaaaatagtctct 17571997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 340
Target Start/End: Complemental strand, 26366685 - 26366612
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||| |||||||  ||||| || |||||||||||||||||| ||  ||||||||| | |||||||||||||||||    
T  26366685 tagttataatagattttcagtgaattaaaattttaaaatag-ttccaattgtatattatgttagtcaaaatagtc 26366612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 354
Target Start/End: Complemental strand, 29079378 - 29079251
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgta----taatttgt 326  Q
    ||||||||||||||| | | | | |||| ||||||| |||| ||| ||| |||||||||| ||||||||  |||||  ||| ||||||    ||||| ||    
T  29079378 gtaatagtcattttggtccataattgtataacgagtggtcacaattgtccttcaatgtatcaaaatttttgaatagactttgattgtacagttaattagt 29079279  T
Q  327 tagtcaaaatagtctctaacattaaaat 354  Q
    |||||||||||||  |||| ||||||||    
T  29079278 tagtcaaaatagttcctaatattaaaat 29079251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 46008567 - 46008649
Alignment:
Q  274 atagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||| |||||||||||  | |||| |||||| | ||||||| |  | ||||||||| |||||||||| ||||||||||||||    
T  46008567 atagtttttcaatgtatcgagatttcaaaataatctttaattatgcattttgttagttaaaatagtctttaacattaaaataa 46008649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 530
Target Start/End: Complemental strand, 257930 - 257869
Alignment:
Q  469 attttagtattattgactattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    ||||||||| ||  || |||||||||||||| ||||||||||||||  ||||||| ||||||    
T  257930 attttagtactaaagagtattttgattaacagagtgcacaatcaaatgttattttgaaattt 257869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 512
Target Start/End: Original strand, 14984670 - 14984699
Alignment:
Q  483 gactattttgattaacaaagtgcacaatca 512  Q
    ||||||||||||||||||||||||||||||    
T  14984670 gactattttgattaacaaagtgcacaatca 14984699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 24255215 - 24255296
Alignment:
Q  227 agaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtt 308  Q
    ||||||||||||||||||  |   ||||||| |||||||| |||||||||||   ||||||||| |||| ||| ||||||||    
T  24255215 agaggtaatagtcattttactctctgaatgtgaaacgagtggtcataatagttcctcaatgtatcaaaaattttaaatagtt 24255296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 26019275 - 26019349
Alignment:
Q  295 attttaaaatagtttttaattgtataatttgttagtcaaa----atagtctctaacattaaaataacatttcaat 365  Q
    ||||||||||||| |||| |||| || ||| |||||||||    ||||||||||||| |||||||| ||||||||    
T  26019275 attttaaaatagtctttatttgtgtactttattagtcaaaatatatagtctctaacactaaaataatatttcaat 26019349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 512
Target Start/End: Original strand, 30843802 - 30843831
Alignment:
Q  483 gactattttgattaacaaagtgcacaatca 512  Q
    ||||||||||||||||||||||||||||||    
T  30843802 gactattttgattaacaaagtgcacaatca 30843831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 341
Target Start/End: Complemental strand, 40619296 - 40619187
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    ||||||| | |||||| | |||||||  || ||||||||||| || ||  ||||||||| |||||||||||||||| | | |||||  | | ||||| ||    
T  40619296 taatagttactttgatccttgaatgtgtaatgagtagtcatattaatccctcaatgtatcaaaattttaaaatagtctctgattgtgcactatgttattc 40619197  T
Q  332 aaaatagtct 341  Q
    ||||||||||    
T  40619196 aaaatagtct 40619187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 548
Target Start/End: Original strand, 40619188 - 40619253
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagatta 548  Q
    ||||||||||| ||||| |||||||||||| | | |||||||||||||| ||  |||||| |||||    
T  40619188 gactattttgaataacatagtgcacaatcagagactattttaaaattttgatacattgagggatta 40619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 41897880 - 41897965
Alignment:
Q  271 ataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||| ||| |||||| |||||||||||| ||| ||  |||||  |  ||| |||| |||||||||||||| ||||||||||    
T  41897880 ataatagtccttcgatgtatcaaaattttaaaaaagtcttagattgtgcatgttgctagttaaaatagtctctaatattaaaataa 41897965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 43908634 - 43908703
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaa 335  Q
    |||||| | ||||| |||||| ||| |||||||||||| | ||||| |||||| | ||||||||||||||    
T  43908634 tagtcacagtagtccttcaatatatcaaaattttaaaacaattttttattgtacattttgttagtcaaaa 43908703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 340
Target Start/End: Original strand, 7672337 - 7672445
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    |||||||||||||| | | |||||||  ||  | |||| |||||| ||||| |||||||||||||| ||||||| ||  | ||| | || ||||||||||    
T  7672337 taatagtcattttggtccttgaatgtgtaataaatagttataataatcttttaatgtattaaaattctaaaataattcatgattttgtactttgttagtc 7672436  T
Q  332 aaaatagtc 340  Q
    | |||||||    
T  7672437 ataatagtc 7672445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 22235537 - 22235477
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctcta 344  Q
    |||||||  |||||| |||||| ||||| |||||  |||||||||||||||||| ||||||    
T  22235537 aatgtatcgaaatttcaaaataatttttgattgtgcaatttgttagtcaaaataatctcta 22235477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 25321775 - 25321687
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||||||  ||||||||| || || | ||| || ||||||||||||||||||||||||    |||||||| | ||||| ||||||||||    
T  25321775 tgaatgtgtaacgagtaggcacaacaatctatctatgtattaaaattttaaaatagttcacgattgtatattctgttaatcaaaatagt 25321687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 34294103 - 34294151
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||| |||||||||||||||||| | | |||||||| |||||    
T  34294103 gactattttgactaacaaagtgcacaatcatatactattttaagatttt 34294151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 543
Target Start/End: Complemental strand, 43838546 - 43838486
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgaga 543  Q
    ||||||| ||| ||||||||| || ||||||| | |||||||||||||||||  |||||||    
T  43838546 gactattatgactaacaaagtacaaaatcaaagactattttaaaattttaatacattgaga 43838486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 43838821 - 43838869
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||| ||||||| |||||||||||  | ||||||||||||||    
T  43838821 gactattttgactaacaaaatgcacaatcaatgactattttaaaatttt 43838869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 45681462 - 45681418
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||| ||| |||||||||| |||||||| |||||||||||||||    
T  45681462 gagtaatcacaatagtctttaaatgtattgaaattttaaaatagt 45681418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 550
Target Start/End: Original strand, 31738368 - 31738435
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgagagattatt 550  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  31738368 gactattttgactaacaaagtacaaaatcaaaaattattttaaaattctaatacattgagagattatt 31738435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 50155542 - 50155606
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgtta 328  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| | |||||||    
T  50155542 gagtagtcataatagt-tttcaatgtatcaaaattttaaaatagtttttgattgtacactttgtta 50155606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 340
Target Start/End: Complemental strand, 27901009 - 27900901
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtc 331  Q
    ||||||||| |||||| | |||||||  || ||||||||| ||||||| |||||||||| |||| ||||||||||| | | |||||  |||| |||||||    
T  27901009 taatagtcaatttgatccttgaatgtgtaatgagtagtcagaatagtccttcaatgtataaaaaatttaaaatagtctatgattgtgcaattagttagtc 27900910  T
Q  332 aaaatagtc 340  Q
     ||||||||    
T  27900909 gaaatagtc 27900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 531
Target Start/End: Original strand, 46187336 - 46187383
Alignment:
Q  484 actattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  46187336 actattttaattaacatagtgcacaatcaaaaattattttaaaatttt 46187383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 340
Target Start/End: Complemental strand, 9890801 - 9890696
Alignment:
Q  235 tagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaa 334  Q
    ||||||||||| ||| |||||||  ||||| || ||| |||||||| |||||||||||||||| |||||||| |  | ||| |  | |||||||||||||    
T  9890801 tagtcattttggttcctgaatgtggaacgattaatcacaatagtctctcaatgtattaaaattctaaaatagatcatgattttgcactttgttagtcaaa 9890702  T
Q  335 atagtc 340  Q
    ||||||    
T  9890701 atagtc 9890696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 40872796 - 40872755
Alignment:
Q  266 tagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  40872796 tagtcataatagtctttcaatgtattaaaattttaatatagt 40872755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 29795258 - 29795306
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  29795258 gactattttgattaacatagtgcacaatcaaatactattttaaaatttt 29795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 355
Target Start/End: Complemental strand, 32743437 - 32743313
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||  ||| ||| ||||||   ||| |||| ||||| | ||| ||||| |||| |||||||||||||| | ||| |||||| | || ||||||    
T  32743437 gtaatagtcacattggttcttgaatgagtaacaagtaatcatagtggtccttcaacgtatcaaaattttaaaataatctttgattgtacatttcgttagt 32743338  T
Q  331 caaaatagtctctaacattaaaata 355  Q
    ||||||| ||||| |||||||||||    
T  32743337 caaaataatctctgacattaaaata 32743313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 45679523 - 45679615
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    |||||||  |||||||||||| |||| ||  |||| ||||||||||||||||||||||||| |||||  | | | ||||||||||| ||||||    
T  45679523 tgaatgtgtaacgagtagtcacaataatccatcaacgtattaaaattttaaaatagtttttgattgtgcactctattagtcaaaatggtctct 45679615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 16192348 - 16192273
Alignment:
Q  234 atagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagttt 309  Q
    |||||||||||  | | |||||||  ||| ||||||||||||| || |||||||||| ||||||||||||||||||    
T  16192348 atagtcattttagtacttgaatgtgtaacaagtagtcataatattccttcaatgtatcaaaattttaaaatagttt 16192273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 31738435 - 31738368
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||| ||| ||||||||||| |||||||||||| ||||| ||| | || |||||||||||||||||||    
T  31738435 aataatctctcaatgtattagaattttaaaataatttttgattttgtactttgttagtcaaaatagtc 31738368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 45392280 - 45392351
Alignment:
Q  224 ttaagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaa 295  Q
    ||||| |||||||||||||||||||| |||||||  || ||||||||| |||||||  ||||||||| ||||    
T  45392280 ttaaggggtaatagtcattttgattcctgaatgtgtaatgagtagtcaaaatagtccctcaatgtatcaaaa 45392351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 3048251 - 3048193
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgta 318  Q
    ||||| ||||| ||||||| ||||||| ||| |||||||||||||||||| ||||||||    
T  3048251 aacgaatagtcgtaatagtttttcaatctatcaaaattttaaaatagtttctaattgta 3048193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 35621666 - 35621592
Alignment:
Q  233 aatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||||||| | | |||||  ||||||| |||| |||||| ||| ||||||||||| ||||||||||||    
T  35621666 aatagtcattttgatccttaaatgtgtaacgagttgtcacaatagtttttaaatgtattaaatttttaaaatagt 35621592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 46500850 - 46500780
Alignment:
Q  283 caatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaa 353  Q
    |||| ||| |||||||||||||||||  ||||| | || |||||||||||| ||||||||||||| |||||    
T  46500850 caatatatcaaaattttaaaatagttcataattatgtactttgttagtcaatatagtctctaacactaaaa 46500780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 9777211 - 9777146
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaatt 297  Q
    |||||||||||||||| | ||||||||  || ||||||||||||||| ||||||| ||| ||||||    
T  9777211 taatagtcattttgatccttgaatgtattacaagtagtcataatagtttttcaatatatcaaaatt 9777146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 27463757 - 27463834
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    |||||||| | || ||| |||||||||||||||| ||||||||| | ||||| |  | ||||||||||||||||||||    
T  27463757 agtagtcacattattctctcaatgtattaaaattctaaaatagtctctaattttgcactttgttagtcaaaatagtct 27463834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 482 - 531
Target Start/End: Complemental strand, 29795160 - 29795111
Alignment:
Q  482 tgactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||||||| |||||| |||| |||||| ||||||||||||||    
T  29795160 tgactattttgattaaaaaagtgtacaaccaaaaaatattttaaaatttt 29795111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 29795328 - 29795255
Alignment:
Q  270 cataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||||||||||| ||| ||| |||||||||||||||| ||| |||||  | | ||||| ||||||||||||||    
T  29795328 cataatagtcttttaatatatcaaaattttaaaatagtatttgattgtgcactatgttaatcaaaatagtctct 29795255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 39162405 - 39162514
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagt 330  Q
    ||||||||||||||| | | ||||||   || ||||| ||| ||||||  ||||||||||| |||||| |||||||||||| ||||   | | |||||||    
T  39162405 gtaatagtcattttggtccttgaatgcgtaatgagtaatcacaatagtacttcaatgtattgaaatttcaaaatagtttttgattgcgcattatgttagt 39162504  T
Q  331 caaaatagtc 340  Q
    ||||||||||    
T  39162505 caaaatagtc 39162514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 2998898 - 2998986
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagt 339  Q
    |||||||  ||| |||| ||| |||||||| | ||||||| |||||||||||||||||  |||||||| | ||| ||| ||||||||||    
T  2998898 tgaatgtgtaacaagtaatcacaatagtctgtaaatgtatcaaaattttaaaatagttcataattgtacactttattaatcaaaatagt 2998986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 8234316 - 8234372
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgag 542  Q
    |||||||||||||| | |||||||| ||||| |||||||||||||| || |||||||    
T  8234316 tattttgattaacagaatgcacaattaaaaactattttaaaattttgatatattgag 8234372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 355
Target Start/End: Complemental strand, 10519605 - 10519501
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacatta 350  Q
    |||||||  ||||||||  ||||||| ||||| |||||| |||||||  |||||||| | | |||||| ||||| ||| |||||||| | ||| ||||||    
T  10519605 tgaatgtgtaacgagtaaccataataatcttttaatgtagtaaaattacaaaatagtatctgattgtacaatttattaatcaaaataatttctgacatta 10519506  T
Q  351 aaata 355  Q
    |||||    
T  10519505 aaata 10519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 522
Target Start/End: Complemental strand, 46547350 - 46547314
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattt 522  Q
    |||||| ||||||||||||||||||||||||||||||    
T  46547350 tattttaattaacaaagtgcacaatcaaaaattattt 46547314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 51849608 - 51849552
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||||||||||||||||||||| | |||||| | ||  |||||||||||||||    
T  51849608 aatgtattaaaattttaaaatagtttgtgattgtacacttctttagtcaaaatagtc 51849552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 6541006 - 6541081
Alignment:
Q  232 taatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||||||| || | |||||||  ||||| |||||||||||||| || ||||||| |||||||  |||||||    
T  6541006 taatagtcattttaatccctgaatgtgtaacgaatagtcataatagtcctttaatgtatcaaaatttccaaatagt 6541081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 542
Target Start/End: Complemental strand, 8779060 - 8779001
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaatgtattgag 542  Q
    ||||||||| | |||||||||||||||||| ||| |||||| ||||||| || |||||||    
T  8779060 gactattttaactaacaaagtgcacaatcagaaactattttgaaattttgatatattgag 8779001  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 10018735 - 10018778
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||    
T  10018735 agtagtcacaatagtctatcaatgtatcaaaattttaaaatagt 10018778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 30050612 - 30050577
Alignment:
Q  320 aatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||||||||||||||||||| |||||||||||    
T  30050612 aatttgttagtcaaaatagtctctcacattaaaata 30050577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 41730200 - 41730101
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataacatttcaatgtcaatattaactttt 381  Q
    |||||||||| ||||||||||||||| ||||||| |  | || |||||| || ||||||| |||  |||||||    |||||||||||| ||||||||||    
T  41730200 tcaatgtattgaaattttaaaatagtgtttaattatgcatttcgttagttaagatagtctttaaagttaaaatggtgtttcaatgtcaacattaactttt 41730101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 45679608 - 45679561
Alignment:
Q  487 attttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    ||||||| ||| | |||||||||||||||| |||||||||||||||||    
T  45679608 attttgactaatagagtgcacaatcaaaaactattttaaaattttaat 45679561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 45679792 - 45679721
Alignment:
Q  284 aatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||| |||||||||||||||||  | |||||  |||| |||||||||||||||| ||||  ||||||||    
T  45679792 aatgtataaaaattttaaaatagttcatgattgtgcaattcgttagtcaaaatagtccctaatgttaaaata 45679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 531
Target Start/End: Complemental strand, 50155609 - 50155570
Alignment:
Q  492 gattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  50155609 gattaacaaagtgtacaatcaaaaactattttaaaatttt 50155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 5529649 - 5529739
Alignment:
Q  275 tagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataacatttcaat 365  Q
    ||||| |||||| ||| ||| |||||||||||| | | |||||   ||||||||||||||||||||| | ||| |||||||| || |||||    
T  5529649 tagtccttcaatatatcaaagttttaaaatagtctctgattgtgcgatttgttagtcaaaatagtctttgacactaaaataatatctcaat 5529739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 355
Target Start/End: Complemental strand, 6728109 - 6727979
Alignment:
Q  225 taagaggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataattt 324  Q
    |||| ||| |||||||||||  | | |||||||  ||||| |||||| ||||||| ||||||| || ||||||  |||||||| ||  |||||  | | |    
T  6728109 taaggggtgatagtcattttcgtccctgaatgtgtaacgaatagtcacaatagtccttcaatgaatcaaaattccaaaatagtcttccattgtgcactat 6728010  T
Q  325 gttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||| | || ||||||||    
T  6728009 gttagtcaaaatagtctttgactttaaaata 6727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 8791994 - 8791908
Alignment:
Q  231 gtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgt 317  Q
    ||||||||||||||| | | | |||||| ||| ||||| |||||||||| |||| ||||| |||||| ||||| ||| ||| |||||    
T  8791994 gtaatagtcattttggtgccttaatgtataacaagtagccataatagtcgttcattgtatcaaaattctaaaacagtctttgattgt 8791908  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 355
Target Start/End: Original strand, 9890566 - 9890643
Alignment:
Q  277 gtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||||||||| |||| || ||| |||||| | || ||||||||||||| ||  |||||||| ||||    
T  9890566 gtctttcaatgtattaaaatttt-aaattgtctttgattgtacatttcgttagtcaaaataatccttaacattagaata 9890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 48701767 - 48701717
Alignment:
Q  288 tattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatag 338  Q
    |||||||||||||||||||| | ||||| | || |||||||||||||||||    
T  48701767 tattaaaattttaaaatagtatctaattatgtattttgttagtcaaaatag 48701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 8234371 - 8234310
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    ||||| ||| ||||||||||||||||||||||||||  | | ||||| |||||||| |||||    
T  8234371 tcaatatatcaaaattttaaaatagtttttaattgtgcattctgttaatcaaaataatctct 8234310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 33746359 - 33746440
Alignment:
Q  260 aacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtct 341  Q
    |||||||||||| |||| || |||||||||  |||||| |||||||||  || |||||| | ||  ||||||||||||||||    
T  33746359 aacgagtagtcacaataatcattcaatgtagaaaaattgtaaaatagtcattgattgtacacttaattagtcaaaatagtct 33746440  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 38445271 - 38445190
Alignment:
Q  236 agtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgt 317  Q
    |||||||||||||| |||||||  ||| | |||||| ||||||| || |||||||  ||||| ||||||||| ||| |||||    
T  38445271 agtcattttgattcctgaatgtgcaacaaatagtcacaatagtcctttaatgtatcgaaattctaaaatagtctttgattgt 38445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 50804264 - 50804341
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagt 307  Q
    ||||||||| |||||  | | |||||||  ||||||| |||| |||||||||| ||||| | ||||||||||||||||    
T  50804264 ggtaatagttattttagtccttgaatgtgtaacgagtggtcacaatagtctttgaatgtgtcaaaattttaaaatagt 50804341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 6541269 - 6541317
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    ||||||||||| | ||||||||||||||||   ||||||||||||||||    
T  6541269 gactattttgacttacaaagtgcacaatcatggattattttaaaatttt 6541317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 8241943 - 8241991
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    |||||||||||||  |||| |||||| |||| |||||||||||||||||    
T  8241943 tattttgattaactgagtgtacaatctaaaactattttaaaattttaat 8241991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 31415141 - 31415049
Alignment:
Q  251 tgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctct 343  Q
    |||||||  ||| |||| |||||||| || || |||||||| ||||||||||||||| ||| ||||| || ||  || || ||||||||||||    
T  31415141 tgaatgtctaacaagtaatcataataatcctttaatgtatttaaattttaaaatagtatttgattgtgtacttcattggttaaaatagtctct 31415049  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 32669782 - 32669834
Alignment:
Q  229 aggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctt 281  Q
    ||||||||||||||||| | | |||||||  |||||||||||| |||||||||    
T  32669782 aggtaatagtcattttggtccatgaatgtgtaacgagtagtcacaatagtctt 32669834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 530
Target Start/End: Original strand, 40193067 - 40193111
Alignment:
Q  486 tattttgattaacaaagtgcacaatcaaaaattattttaaaattt 530  Q
    |||||||| ||||| ||||| |||||||||| |||||||||||||    
T  40193067 tattttgactaacatagtgcgcaatcaaaaactattttaaaattt 40193111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 534
Target Start/End: Original strand, 51849551 - 51849603
Alignment:
Q  482 tgactattttgattaacaaagtgcacaatcaaaaattattttaaaattttaat 534  Q
    |||||||||||| |||  ||||| ||||||| ||| |||||||||||||||||    
T  51849551 tgactattttgactaaagaagtgtacaatcacaaactattttaaaattttaat 51849603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 27151 - 27103
Alignment:
Q  483 gactattttgattaacaaagtgcacaatcaaaaattattttaaaatttt 531  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  27151 gactattttgattaacgaagtgcacaatcaaagattattttaaaatttt 27103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 273 - 354
Target Start/End: Original strand, 328806 - 328887
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaat 354  Q
    ||||||||||||||||||  ||||||||||||| | ||| || ||| ||||||| ||||||||| |||||  ||||||||||    
T  328806 aatagtctttcaatgtatcgaaattttaaaataatctttgatggtacaatttgtcagtcaaaatcgtctccgacattaaaat 328887  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 50861 - 50769
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaataa 356  Q
    ||||||||||||||||  || ||||||||||||||||||||| | | | || ||| | |||||| ||||||||||||| |  |||||||||||    
T  50861 agtagtcataatagtcaatcgatgtattaaaattttaaaataatctctgatagtaaactttgtttgtcaaaatagtctttgccattaaaataa 50769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 82857 - 82948
Alignment:
Q  263 gagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||| | || ||||| ||| ||| |||||| ||||||||| | | |||||||| ||||||| ||||||||||||||||| ||||||||    
T  82857 gagtagtcacactactcttt-aatatatcaaaattctaaaatagtatctgattgtatattttgttaatcaaaatagtctctaacgttaaaata 82948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 81293 - 81403
Alignment:
Q  230 ggtaatagtcattttgattcgtgaatgtaaaacgagtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttag 329  Q
    |||||||||||||||||| | |||||||  || |||||| || |||||| | | | |||||| |||||| |||||||||| | |||||  | || |||||    
T  81293 ggtaatagtcattttgatccttgaatgtgcaatgagtagccacaatagtatctgattgtattgaaatttcaaaatagtttatgattgtgcacttcgttag 81392  T
Q  330 tcaaaatagtc 340  Q
    |||||||||||    
T  81393 tcaaaatagtc 81403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 17131 - 17212
Alignment:
Q  273 aatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    |||||||||||||||||| ||||||||||| | || ||| |||||| |    ||||||||||||||||  |||||||||||||    
T  17131 aatagtctttcaatgtatcaaaattttaaatt-gtctttgattgtacacagcgttagtcaaaatagtccataacattaaaata 17212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 20035 - 20107
Alignment:
Q  282 tcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtctctaacattaaaata 355  Q
    ||||||||||||||||||||| | || | | |||||| | ||  |||||||||||||||||||||||| |||||    
T  20035 tcaatgtattaaaattttaaatt-gtctctgattgtacacttcattagtcaaaatagtctctaacattcaaata 20107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 29212 - 29288
Alignment:
Q  264 agtagtcataatagtctttcaatgtattaaaattttaaaatagtttttaattgtataatttgttagtcaaaatagtc 340  Q
    |||||||| ||||||| ||| | |||| ||||||| ||||||||| || |||||  | ||| |||||||||||||||    
T  29212 agtagtcacaatagtccttcgacgtatcaaaatttcaaaatagttcttgattgtccactttattagtcaaaatagtc 29288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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