View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0215-INSERTION-7 (Length: 644)

Name: NF0215-INSERTION-7
Description: NF0215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0215-INSERTION-7
NF0215-INSERTION-7
[»] chr4 (60 HSPs)
chr4 (474-644)||(25323797-25323965)
chr4 (545-644)||(6666469-6666567)
chr4 (474-616)||(50870480-50870620)
chr4 (474-536)||(53828522-53828584)
chr4 (545-644)||(25324103-25324201)
chr4 (474-536)||(22231307-22231369)
chr4 (474-536)||(22827561-22827623)
chr4 (474-644)||(50543329-50543497)
chr4 (474-535)||(12869262-12869323)
chr4 (476-536)||(21498818-21498878)
chr4 (474-534)||(22845446-22845506)
chr4 (474-574)||(50828207-50828307)
chr4 (485-644)||(5398222-5398377)
chr4 (476-535)||(9685422-9685481)
chr4 (474-644)||(35788812-35788979)
chr4 (473-536)||(53828287-53828350)
chr4 (476-534)||(400566-400624)
chr4 (474-536)||(22863497-22863559)
chr4 (474-536)||(28073180-28073242)
chr4 (473-603)||(35609488-35609617)
chr4 (474-536)||(35788682-35788744)
chr4 (474-536)||(35796741-35796803)
chr4 (474-536)||(39902562-39902624)
chr4 (474-536)||(40717440-40717502)
chr4 (474-536)||(50543566-50543628)
chr4 (579-644)||(1215907-1215971)
chr4 (488-620)||(12005482-12005615)
chr4 (491-536)||(17222668-17222713)
chr4 (473-514)||(19190573-19190614)
chr4 (473-534)||(21685023-21685084)
chr4 (471-536)||(54054801-54054866)
chr4 (476-536)||(5846169-5846229)
chr4 (476-536)||(9685655-9685715)
chr4 (476-536)||(14783188-14783248)
chr4 (476-536)||(21498377-21498437)
chr4 (474-534)||(22822375-22822435)
chr4 (488-536)||(28245539-28245587)
chr4 (474-534)||(40726746-40726806)
chr4 (545-644)||(7572541-7572639)
chr4 (582-644)||(8902778-8902838)
chr4 (582-644)||(8903026-8903086)
chr4 (485-536)||(35819138-35819189)
chr4 (470-644)||(52559721-52559893)
chr4 (473-536)||(53559288-53559351)
chr4 (474-536)||(1518187-1518249)
chr4 (486-536)||(5398487-5398537)
chr4 (474-536)||(11036510-11036572)
chr4 (606-644)||(20726732-20726769)
chr4 (474-536)||(22445475-22445537)
chr4 (476-534)||(25052877-25052935)
chr4 (474-536)||(37836103-37836165)
chr4 (486-536)||(52559590-52559640)
chr4 (476-534)||(53814675-53814733)
chr4 (473-515)||(55100301-55100343)
chr4 (474-535)||(22231072-22231133)
chr4 (476-536)||(2463829-2463889)
chr4 (476-536)||(20821996-20822056)
chr4 (474-534)||(21041376-21041436)
chr4 (473-517)||(25324311-25324355)
chr4 (476-536)||(53814930-53814990)
[»] chr1 (47 HSPs)
chr1 (474-641)||(11524917-11525082)
chr1 (475-641)||(11525132-11525296)
chr1 (545-642)||(52676343-52676439)
chr1 (476-536)||(25137304-25137364)
chr1 (473-589)||(31181511-31181627)
chr1 (576-644)||(12325397-12325464)
chr1 (576-644)||(12376538-12376605)
chr1 (473-536)||(38733405-38733468)
chr1 (474-536)||(4113005-4113067)
chr1 (474-536)||(40079175-40079237)
chr1 (474-530)||(11234245-11234301)
chr1 (576-644)||(17208706-17208773)
chr1 (476-536)||(17452680-17452740)
chr1 (476-536)||(51589015-51589075)
chr1 (465-536)||(2859382-2859453)
chr1 (473-644)||(40188983-40189152)
chr1 (476-535)||(40316051-40316110)
chr1 (474-536)||(25145484-25145546)
chr1 (474-536)||(31432229-31432291)
chr1 (474-536)||(35772052-35772114)
chr1 (474-536)||(35772287-35772349)
chr1 (474-536)||(52650770-52650832)
chr1 (584-641)||(8223420-8223476)
chr1 (474-535)||(25255335-25255396)
chr1 (474-535)||(27413371-27413432)
chr1 (483-536)||(38080627-38080680)
chr1 (471-536)||(42586435-42586500)
chr1 (486-534)||(2859638-2859686)
chr1 (476-536)||(3169789-3169849)
chr1 (480-536)||(31004442-31004498)
chr1 (476-536)||(51589249-51589309)
chr1 (476-536)||(51589829-51589889)
chr1 (473-536)||(29898935-29898998)
chr1 (474-536)||(8870909-8870971)
chr1 (474-536)||(17452827-17452889)
chr1 (486-536)||(25145731-25145781)
chr1 (474-644)||(25713310-25713478)
chr1 (474-536)||(26176931-26176993)
chr1 (474-536)||(26177166-26177228)
chr1 (474-536)||(26865357-26865419)
chr1 (474-536)||(33156756-33156818)
chr1 (476-538)||(51590059-51590121)
chr1 (491-536)||(2997262-2997307)
chr1 (488-536)||(12244975-12245023)
chr1 (473-533)||(21626337-21626397)
chr1 (488-536)||(39348365-39348413)
chr1 (474-534)||(50695833-50695893)
[»] chr7 (41 HSPs)
chr7 (472-644)||(30727115-30727286)
chr7 (482-644)||(47849708-47849867)
chr7 (476-536)||(40746288-40746348)
chr7 (474-536)||(21054952-21055014)
chr7 (474-536)||(25620159-25620221)
chr7 (474-535)||(6991779-6991840)
chr7 (471-535)||(31892411-31892475)
chr7 (476-536)||(34027416-34027476)
chr7 (474-644)||(1596745-1596913)
chr7 (473-536)||(32474523-32474586)
chr7 (485-536)||(48243071-48243122)
chr7 (474-536)||(4886352-4886414)
chr7 (474-536)||(31485658-31485720)
chr7 (485-535)||(32278895-32278945)
chr7 (474-536)||(47710466-47710528)
chr7 (474-536)||(47722122-47722184)
chr7 (477-534)||(23839079-23839136)
chr7 (486-539)||(26028972-26029025)
chr7 (476-536)||(29469628-29469688)
chr7 (476-644)||(29469757-29469923)
chr7 (516-644)||(33996120-33996246)
chr7 (476-536)||(48661556-48661616)
chr7 (485-536)||(2544457-2544508)
chr7 (485-536)||(11211689-11211740)
chr7 (476-535)||(22339604-22339663)
chr7 (473-536)||(34027650-34027713)
chr7 (486-536)||(3038095-3038145)
chr7 (486-536)||(6634878-6634928)
chr7 (486-536)||(14540963-14541013)
chr7 (474-536)||(21861317-21861379)
chr7 (474-536)||(21861552-21861614)
chr7 (474-536)||(22574858-22574920)
chr7 (474-536)||(26239915-26239977)
chr7 (474-536)||(32879613-32879675)
chr7 (486-540)||(36993085-36993139)
chr7 (472-538)||(41191035-41191101)
chr7 (603-644)||(32292671-32292711)
chr7 (476-536)||(6782884-6782944)
chr7 (588-644)||(25620288-25620343)
chr7 (486-534)||(40746523-40746571)
chr7 (471-519)||(48420738-48420786)
[»] chr8 (63 HSPs)
chr8 (473-644)||(38476195-38476363)
chr8 (476-617)||(26208013-26208154)
chr8 (474-559)||(38475747-38475832)
chr8 (472-536)||(27204987-27205051)
chr8 (472-536)||(27205085-27205149)
chr8 (545-644)||(8466558-8466655)
chr8 (474-644)||(11232193-11232361)
chr8 (474-536)||(27205183-27205245)
chr8 (476-536)||(5590369-5590429)
chr8 (491-603)||(7729897-7730009)
chr8 (477-536)||(4828316-4828375)
chr8 (471-534)||(6541940-6542003)
chr8 (474-536)||(39960215-39960277)
chr8 (474-536)||(42846604-42846666)
chr8 (475-536)||(8929040-8929101)
chr8 (474-535)||(41790683-41790743)
chr8 (476-536)||(19256587-19256647)
chr8 (476-536)||(24075307-24075367)
chr8 (477-536)||(26800514-26800573)
chr8 (510-609)||(29907761-29907860)
chr8 (473-536)||(35385809-35385872)
chr8 (473-536)||(35682779-35682842)
chr8 (465-520)||(44694699-44694754)
chr8 (485-535)||(4828092-4828142)
chr8 (474-536)||(10450023-10450085)
chr8 (474-536)||(10884088-10884149)
chr8 (474-536)||(11232428-11232490)
chr8 (486-536)||(18004107-18004157)
chr8 (474-536)||(18939296-18939358)
chr8 (474-536)||(20301284-20301346)
chr8 (474-536)||(21087916-21087978)
chr8 (473-591)||(22638177-22638295)
chr8 (582-644)||(37867939-37868000)
chr8 (582-644)||(37868179-37868240)
chr8 (474-536)||(39052928-39052990)
chr8 (476-529)||(4963384-4963437)
chr8 (471-536)||(5931945-5932010)
chr8 (474-535)||(10454450-10454511)
chr8 (474-535)||(37001488-37001549)
chr8 (571-644)||(39052790-39052861)
chr8 (487-536)||(45031373-45031422)
chr8 (571-619)||(10615035-10615083)
chr8 (476-536)||(17469841-17469901)
chr8 (476-536)||(17477088-17477148)
chr8 (476-536)||(19256821-19256881)
chr8 (576-644)||(39052638-39052704)
chr8 (476-536)||(39743552-39743612)
chr8 (497-589)||(44931204-44931296)
chr8 (485-536)||(37001249-37001300)
chr8 (474-536)||(422452-422514)
chr8 (474-536)||(6559448-6559510)
chr8 (486-536)||(8716137-8716187)
chr8 (474-536)||(12317069-12317131)
chr8 (474-536)||(12547121-12547183)
chr8 (486-536)||(24532432-24532482)
chr8 (490-536)||(38447442-38447488)
chr8 (474-536)||(42049686-42049748)
chr8 (475-593)||(12022386-12022506)
chr8 (495-536)||(20702820-20702861)
chr8 (485-538)||(31079809-31079862)
chr8 (476-536)||(7267466-7267526)
chr8 (476-536)||(34842701-34842761)
chr8 (495-539)||(34843137-34843181)
[»] chr5 (41 HSPs)
chr5 (479-593)||(7369690-7369804)
chr5 (472-534)||(18333462-18333524)
chr5 (474-644)||(41666756-41666924)
chr5 (474-535)||(15480583-15480644)
chr5 (473-536)||(28510114-28510177)
chr5 (474-644)||(24346500-24346668)
chr5 (474-536)||(25258093-25258155)
chr5 (474-536)||(25321883-25321945)
chr5 (474-536)||(41666992-41667054)
chr5 (475-536)||(9368618-9368679)
chr5 (476-536)||(8287824-8287884)
chr5 (474-534)||(18333698-18333758)
chr5 (476-536)||(27132994-27133054)
chr5 (474-522)||(30588855-30588903)
chr5 (486-644)||(8081124-8081281)
chr5 (476-539)||(42295599-42295662)
chr5 (469-535)||(95260-95326)
chr5 (474-520)||(9682315-9682361)
chr5 (474-536)||(19705926-19705988)
chr5 (474-644)||(24269870-24270037)
chr5 (476-534)||(24487646-24487704)
chr5 (486-536)||(24528563-24528613)
chr5 (487-532)||(170563-170608)
chr5 (474-531)||(12151910-12151967)
chr5 (599-644)||(30494666-30494710)
chr5 (599-644)||(30535009-30535053)
chr5 (491-536)||(30758315-30758360)
chr5 (476-536)||(8098340-8098400)
chr5 (476-536)||(29909722-29909782)
chr5 (474-536)||(60110-60172)
chr5 (472-534)||(12034715-12034777)
chr5 (474-536)||(13296696-13296757)
chr5 (474-536)||(15480345-15480407)
chr5 (474-536)||(17352434-17352496)
chr5 (474-536)||(24531622-24531684)
chr5 (487-536)||(7092172-7092221)
chr5 (491-536)||(30770065-30770110)
chr5 (486-539)||(31974236-31974289)
chr5 (474-535)||(38731837-38731898)
chr5 (576-644)||(6919295-6919361)
chr5 (584-644)||(31974357-31974415)
[»] chr2 (38 HSPs)
chr2 (472-644)||(5711436-5711606)
chr2 (475-641)||(21383284-21383454)
chr2 (474-644)||(16419419-16419587)
chr2 (474-593)||(13210492-13210611)
chr2 (474-536)||(17719423-17719485)
chr2 (474-536)||(40379208-40379270)
chr2 (474-536)||(40379443-40379505)
chr2 (473-534)||(13210780-13210841)
chr2 (474-539)||(14466409-14466474)
chr2 (485-536)||(2324263-2324314)
chr2 (476-535)||(19191611-19191670)
chr2 (474-536)||(2029792-2029854)
chr2 (474-536)||(2030027-2030089)
chr2 (474-588)||(8227320-8227434)
chr2 (474-536)||(28407792-28407854)
chr2 (567-644)||(13210679-13210754)
chr2 (475-536)||(29718351-29718412)
chr2 (477-529)||(5450492-5450544)
chr2 (488-536)||(32884130-32884178)
chr2 (508-644)||(33606087-33606221)
chr2 (485-536)||(2324497-2324548)
chr2 (485-536)||(37769953-37770004)
chr2 (474-536)||(5711674-5711736)
chr2 (474-532)||(16419294-16419352)
chr2 (474-536)||(17719589-17719651)
chr2 (474-536)||(27897605-27897667)
chr2 (474-536)||(37840360-37840422)
chr2 (475-536)||(21591805-21591866)
chr2 (476-533)||(27897504-27897561)
chr2 (567-644)||(31001839-31001915)
chr2 (491-536)||(40010032-40010077)
chr2 (492-536)||(93737-93781)
chr2 (486-534)||(5509104-5509152)
chr2 (472-536)||(15124545-15124609)
chr2 (476-536)||(17854930-17854990)
chr2 (474-594)||(19570973-19571093)
chr2 (486-526)||(27036426-27036466)
chr2 (476-536)||(33456019-33456078)
[»] chr6 (35 HSPs)
chr6 (473-644)||(4868575-4868744)
chr6 (474-536)||(11721928-11721990)
chr6 (468-536)||(25065087-25065155)
chr6 (474-536)||(4868812-4868874)
chr6 (474-536)||(8001549-8001611)
chr6 (476-534)||(27656483-27656541)
chr6 (474-536)||(33494562-33494624)
chr6 (471-536)||(8026627-8026692)
chr6 (474-539)||(13740936-13741001)
chr6 (474-539)||(13746436-13746501)
chr6 (476-536)||(8026412-8026472)
chr6 (476-536)||(12330180-12330240)
chr6 (476-536)||(12330292-12330352)
chr6 (476-536)||(30256835-30256895)
chr6 (474-536)||(3713365-3713427)
chr6 (474-536)||(9705277-9705339)
chr6 (474-536)||(13353224-13353286)
chr6 (474-536)||(33796349-33796411)
chr6 (474-535)||(5648671-5648732)
chr6 (485-644)||(12329954-12330111)
chr6 (476-535)||(8566960-8567019)
chr6 (473-536)||(19712975-19713038)
chr6 (474-536)||(6623409-6623471)
chr6 (474-536)||(9705043-9705105)
chr6 (598-644)||(12268943-12268988)
chr6 (485-539)||(16722817-16722871)
chr6 (474-536)||(17147659-17147721)
chr6 (490-536)||(28867972-28868018)
chr6 (474-535)||(19639112-19639173)
chr6 (474-536)||(19712737-19712801)
chr6 (475-536)||(30256601-30256662)
chr6 (486-534)||(2753283-2753331)
chr6 (485-533)||(5572394-5572442)
chr6 (476-536)||(21690745-21690805)
chr6 (476-536)||(27772737-27772797)
[»] scaffold0519 (2 HSPs)
scaffold0519 (473-644)||(2068-2237)
scaffold0519 (474-536)||(1939-2001)
[»] chr3 (43 HSPs)
chr3 (474-536)||(8018991-8019053)
chr3 (474-536)||(22729123-22729185)
chr3 (474-536)||(45828042-45828104)
chr3 (472-644)||(35038191-35038361)
chr3 (474-536)||(1723075-1723137)
chr3 (474-536)||(4155347-4155409)
chr3 (474-536)||(24866220-24866282)
chr3 (571-644)||(22775494-22775566)
chr3 (476-536)||(11589808-11589868)
chr3 (474-534)||(54567917-54567977)
chr3 (485-536)||(20327624-20327675)
chr3 (473-535)||(4155583-4155645)
chr3 (476-534)||(13574922-13574980)
chr3 (486-536)||(20327860-20327910)
chr3 (474-536)||(34610584-34610646)
chr3 (486-603)||(45828202-45828319)
chr3 (576-644)||(13574785-13574852)
chr3 (476-536)||(50052540-50052600)
chr3 (481-644)||(21888557-21888719)
chr3 (485-536)||(27670402-27670453)
chr3 (474-536)||(1800238-1800300)
chr3 (474-536)||(7697397-7697459)
chr3 (474-536)||(8142407-8142468)
chr3 (474-536)||(16239614-16239676)
chr3 (474-536)||(17638257-17638319)
chr3 (474-536)||(23708223-23708285)
chr3 (474-536)||(23726679-23726741)
chr3 (474-536)||(23745135-23745197)
chr3 (474-536)||(24063660-24063722)
chr3 (474-536)||(31317251-31317313)
chr3 (474-536)||(35038427-35038489)
chr3 (474-536)||(43781606-43781668)
chr3 (474-536)||(45138970-45139032)
chr3 (474-536)||(54368539-54368601)
chr3 (474-535)||(12930127-12930188)
chr3 (491-536)||(21832200-21832245)
chr3 (474-535)||(21888451-21888512)
chr3 (591-644)||(31150996-31151048)
chr3 (471-536)||(33205488-33205553)
chr3 (476-536)||(9272984-9273044)
chr3 (485-529)||(13574694-13574738)
chr3 (474-534)||(20479033-20479092)
chr3 (474-502)||(41915227-41915255)
[»] scaffold0692 (2 HSPs)
scaffold0692 (474-588)||(5753-5867)
scaffold0692 (474-536)||(5543-5605)
[»] scaffold0400 (1 HSPs)
scaffold0400 (476-536)||(3868-3928)
[»] scaffold0365 (1 HSPs)
scaffold0365 (476-536)||(4512-4572)
[»] scaffold0181 (1 HSPs)
scaffold0181 (474-534)||(20964-21024)
[»] scaffold0005 (1 HSPs)
scaffold0005 (476-536)||(56482-56542)
[»] scaffold0766 (1 HSPs)
scaffold0766 (485-536)||(6297-6348)
[»] scaffold0334 (1 HSPs)
scaffold0334 (486-536)||(4440-4490)
[»] scaffold0129 (1 HSPs)
scaffold0129 (485-535)||(14327-14377)
[»] scaffold0047 (1 HSPs)
scaffold0047 (474-536)||(12670-12732)


Alignment Details
Target: chr4 (Bit Score: 71; Significance: 8e-32; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 474 - 644
Target Start/End: Original strand, 25323797 - 25323965
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    ||||||||||||| |||||| |||||||| ||  ||||||||||| |  |||||||||||||| ||  || ||||||||||||||||   || ||||| |    
T  25323797 tcttagaatttgtagttgggactaacacaaccccacaaaaccggcctgcgaggtgaggattgcccccacgtataaacacttgttcaggtcatctctcaac 25323896  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||| ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  25323897 cgatgtggggctctttaacac-ccccctcatgcccaacaccatt-gggcttggtgcgtggatataaatggt 25323965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 644
Target Start/End: Original strand, 6666469 - 6666567
Alignment:
Q  545 ataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||| ||||| | || || || || ||| |||||||||||||||||||||||| ||| | ||||||| ||||||||||| ||||||||||||||    
T  6666469 ataaacacttcttcaggccatctcccaaccaatgcgggactctttaacacacaccctcacgcctagcactatt-gggcttggtgcatggatataaatggt 6666567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 616
Target Start/End: Original strand, 50870480 - 50870620
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| |||||||||| ||||||||| ||  |||||| ||||| | |||||||||| ||| ||  |  |||||||||||||||| | || ||||  |    
T  50870480 tcttagaaattgtggttggacctaacacaaccccacaaaatcggctaa-gaggtgaggactgcccccacttataaacacttgttcaggccatctctcgac 50870578  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactat 616  Q
    | |||||| |||||||||||||| |||||||||||| ||||||    
T  50870579 caatgtgg-actctttaacacaccccctcatgcccagcactat 50870620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 53828522 - 53828584
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  53828522 tcttagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgc 53828584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 545 - 644
Target Start/End: Original strand, 25324103 - 25324201
Alignment:
Q  545 ataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||| | | || ||| ||||||  | |||||||||||||||| ||||||  ||||| |||||| ||||||||||||| ||||||||||||    
T  25324103 ataaacacttgttctggccatctcttatcccacattggactctttaacacaccccctcacacccaatactatt-gggcttggtgcgtagatataaatggt 25324201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 22231307 - 22231369
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  22231307 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 22231369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 22827623 - 22827561
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  22827623 tcttagaaatcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgc 22827561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 644
Target Start/End: Original strand, 50543329 - 50543497
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| || |||||||||||| ||  |  ||| |||| |  |||| | ||  |  |||    
T  50543329 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttatacacacattgtcagaccatcacctatc 50543428  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||| ||| ||||||||| |||||| | ||||||||||| ||||||||| |||||| |||||||||    
T  50543429 cgatgtggggctc-ttaacacaccccctcacgaccaacactatt-gggcttggttcgtggacataaatggt 50543497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 12869262 - 12869323
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||||||||||||| ||  ||||||||| ||||||||||||||||||    
T  12869262 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccgtcttatgaggtgaggattg 12869323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 21498878 - 21498818
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  21498878 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 21498818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 22845446 - 22845506
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||    
T  22845446 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 22845506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 574
Target Start/End: Original strand, 50828207 - 50828307
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| | |||||||| || | ||||  |  ||||||||||||| || | || |||||||    
T  50828207 tcttagaatttgtgtttgggcctaacacagccccacaaaaccggcctgtgaggtgatgactactcccacttataaacacttgtttaggccatctctcatc 50828306  T
Q  574 c 574  Q
    |    
T  50828307 c 50828307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 644
Target Start/End: Original strand, 5398222 - 5398377
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggac 584  Q
    |||||||||||||||||| ||  ||||||||||||| |||| |||||||||| ||| |  |||||||| |  |||| | ||  ||  ||| |||||||||    
T  5398222 gtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccct-cttataaacacattgtcagaccatgacttgtccaatgtgggac 5398320  T
Q  585 tctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||| |||||| | |||||| |||| ||||||||| |||||| |||||||||    
T  5398321 tc-ttaacacac-ccctcacgaccaacattatt-gggcttggttcgtggacataaatggt 5398377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 535
Target Start/End: Complemental strand, 9685481 - 9685422
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||| | |||||||||||||||||| ||| ||||||||| ||| ||||||||||||||    
T  9685481 ttagaaatcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattg 9685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 644
Target Start/End: Complemental strand, 35788979 - 35788812
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctat-ttctcat 572  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||| |||||||||| ||  |  |||||||| |  |||| | || |||| ||    
T  35788979 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcaggccatgttct-at 35788881  T
Q  573 cccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||||| ||||||| | |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  35788880 ccgatgtgggactc-ttaacac-ccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 35788812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 53828287 - 53828350
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| ||||| |||||||||||||| ||  |||||| ||| ||||||||||||||||||    
T  53828287 ttcttagaaattgtgattgggcctaacacaaccccacaaaatcggtttatgaggtgaggattgc 53828350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 534
Target Start/End: Original strand, 400566 - 400624
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||| ||||||||| || ||||||| ||| ||||||||||||| |||||||||||||    
T  400566 ttagaaattgtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatt 400624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 22863559 - 22863497
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| || ||||||||||||    
T  22863559 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgc 22863497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 28073180 - 28073242
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||||||||||||||| ||  |||||||| |||| |||||||||| ||||    
T  28073180 tcttagaaattgtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgagggttgc 28073242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 603
Target Start/End: Original strand, 35609488 - 35609617
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    ||||||||| | |||||||||  | ||||| ||  ||||||||| ||| ||||||||||||||| ||  |  ||||||||||||| || | || || |||    
T  35609488 ttcttagaaatcgtggttgggtgttacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaacacttgtttaggccatctcccat 35609587  T
Q  573 cccatgtgggactctttaacacacaccctca 603  Q
    || ||||||||||| ||||||||| ||||||    
T  35609588 ccaatgtgggactc-ttaacacaccccctca 35609617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 35788744 - 35788682
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  | ||||||||||| |||||||||||||||    
T  35788744 tcttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgc 35788682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 35796741 - 35796803
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||| | ||||||| ||| ||||||||||||| |||||||||||||||    
T  35796741 tcttagaaatggtggttggacttaacacaacctcacaaaaccggcttgtgaggtgaggattgc 35796803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 39902562 - 39902624
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||| |||| |||||||||||||||    
T  39902562 tcttagaaatggtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgc 39902624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 40717440 - 40717502
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||| ||| |||||||||||||||    
T  40717440 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttttgaggtgaggattgc 40717502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 50543566 - 50543628
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| |   ||||||||||||| |||||||||||||||    
T  50543566 tcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgc 50543628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 644
Target Start/End: Complemental strand, 1215971 - 1215907
Alignment:
Q  579 tgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||| |||| ||| ||||||||||| || |||||| |||||| |||||||||    
T  1215971 tgggactctttaacacactcccttatgaccaacactatt-ggacttggttcgtggacataaatggt 1215907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 620
Target Start/End: Original strand, 12005482 - 12005615
Alignment:
Q  488 gttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggactct 587  Q
    |||||| |||||||| ||| ||||||||||||| ||||||||||||||| ||  |  || ||||  ||||||  | || | |  ||| ||||||||||||    
T  12005482 gttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttattaacaaatgttcatgccatattttgtccgatgtgggactct 12005581  T
Q  588 ttaacacaca-ccctcatgcccaacactattggg 620  Q
    |||||||||| |||||| | ||| ||||||||||    
T  12005582 ttaacacacacccctcacgaccagcactattggg 12005615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 17222668 - 17222713
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||    
T  17222668 gggcctaacacatccttacaaaaccggcttgtgaggtgaggattgc 17222713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 514
Target Start/End: Original strand, 19190573 - 19190614
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaac 514  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  19190573 ttcttagaatttgtggttgggcctaacacagccctacaaaac 19190614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 21685084 - 21685023
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||| |||||||||||| ||||||| ||  |||||| |||||| |||||||||||||    
T  21685084 ttcttagaaattgtggttgggcttaacacaaccccacaaaatcggcttgtgaggtgaggatt 21685023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 536
Target Start/End: Original strand, 54054801 - 54054866
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||| |||||| | |||||||||||||||||| ||  |||||| |||||||||||||||| |||||    
T  54054801 tattattagaaatcgtggttgggcctaacacaaccccacaaaaacggcttatgaggtgagaattgc 54054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 5846229 - 5846169
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||| ||||||| || ||  |||||||||||||||||||||||||||||    
T  5846229 ttagaaatcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgc 5846169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 9685715 - 9685655
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  | ||||||||||| |||||||||||||||    
T  9685715 ttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgc 9685655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 14783188 - 14783248
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  14783188 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgc 14783248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 21498437 - 21498377
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||| | ||  ||||||||||||| |||||||||||||||    
T  21498437 ttagaaatcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgc 21498377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 22822435 - 22822375
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||||||| ||||| ||| ||  ||||||||||||| || ||||||||||    
T  22822435 tcttagaatttgtggttggacctaatacaaccgcacaaaaccggcttgtgtggtgaggatt 22822375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 28245539 - 28245587
Alignment:
Q  488 gttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  28245539 gttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 28245587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 40726806 - 40726746
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||| | ||||||||||||||||||  |  ||||||||||||| |||||||||||||    
T  40726806 tcttagaaatcgtggttgggcctaacacaatcctacaaaaccggcttgtgaggtgaggatt 40726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 545 - 644
Target Start/End: Original strand, 7572541 - 7572639
Alignment:
Q  545 ataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||| | || ||||| |  |||| |||||||||||||||| |||||| |||||||  ||    |||||||||| ||||||||||||||    
T  7572541 ataaacacttgttcaggccatctctcaactaatgtaggactctttaacacaccccctcacgcccaacggta-aaaggcttggtgcatggatataaatggt 7572639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 582 - 644
Target Start/End: Complemental strand, 8902838 - 8902778
Alignment:
Q  582 gactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||||| |||||| || ||||||||||   ||||||||| ||||||||||||||    
T  8902838 gactctttaacacaccccctcacgctcaacactatt--agcttggtgcatggatataaatggt 8902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 582 - 644
Target Start/End: Complemental strand, 8903086 - 8903026
Alignment:
Q  582 gactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||||| |||||| || ||||||||||   ||||||||| ||||||||||||||    
T  8903086 gactctttaacacaccccctcacgctcaacactatt--agcttggtgcatggatataaatggt 8903026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 35819138 - 35819189
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||| ||||||| ||||| ||||| |||||||||    
T  35819138 gtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgc 35819189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 644
Target Start/End: Complemental strand, 52559893 - 52559721
Alignment:
Q  470 ttattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacac-ttgttcagtctatttc 568  Q
    |||||||||||| |  ||||||||||||| |||  |  ||||||||||||| ||||||||| ||||||||  |  |||||||| ||||  |||| || ||    
T  52559893 ttattcttagaaatcatggttgggcctaatacaatcctacaaaaccggcttgtgaggtgagaattgctcccacttataaacacattgtcaagtc-atgtc 52559795  T
Q  569 tcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
      |||| |||||||| | |||||||||| ||||||   ||| ||||||| ||||||||| |||||| |||||||||    
T  52559794 ctatccgatgtggga-tttttaacacaccccctcacaaccagcactatt-gggcttggttcgtggacataaatggt 52559721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 53559288 - 53559351
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | |||||||||||||||||| ||  |||||| |||||| | |||||||||||||    
T  53559288 ttcttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgc 53559351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 1518249 - 1518187
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||| ||||||||||| ||  ||||||||||||| |||| ||||||||||    
T  1518249 tcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgc 1518187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 5398487 - 5398537
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| ||||||||| ||  ||||||||||||| |||||||||||||||    
T  5398487 tggttggacctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 5398537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 11036510 - 11036572
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||||| |||||||| ||   |||||||||||| |||||||| ||||||    
T  11036510 tcttagaaattgtggttgggtctaacacaaccccgcaaaaccggcttgtgaggtgatgattgc 11036572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 644
Target Start/End: Original strand, 20726732 - 20726769
Alignment:
Q  606 cccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20726732 cccaacactattggg-cttggtgcgtggatataaatggt 20726769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 22445537 - 22445475
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||||| |||||||| ||  ||||||||| ||| |  ||||||||||||    
T  22445537 tcttagaatttgtggttgggtctaacacaaccccacaaaaccgacttgtagggtgaggattgc 22445475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 534
Target Start/End: Complemental strand, 25052935 - 25052877
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| ||||||| |||||    
T  25052935 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggatt 25052877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 37836165 - 37836103
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||| ||||||||||| ||  ||||||||||||| | ||| |||||||||    
T  37836165 tcttagaaattgtggttaggcctaacacaaccccacaaaaccggcttgtaaggagaggattgc 37836103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 52559640 - 52559590
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  52559640 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgc 52559590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 534
Target Start/End: Original strand, 53814675 - 53814733
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||| | ||||||||||||||||||  |  ||||||||||||| |||||||||||||    
T  53814675 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggatt 53814733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 55100343 - 55100301
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaacc 515  Q
    |||||||||||||||||||||||||||||| | | ||||||||    
T  55100343 ttcttagaatttgtggttgggcctaacacaacttcacaaaacc 55100301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 22231072 - 22231133
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||| ||||| ||| ||  ||||||||||||| ||||||||||||||    
T  22231072 tcttagaaatcgtggttggacctaatacaaccccacaaaaccggcttgtgaggtgaggattg 22231133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 2463889 - 2463829
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||| ||||||||||||| ||  ||||||||||||| |||||| ||||||||    
T  2463889 ttagaaatggtggctgggcctaacacaaccccacaaaaccggcttgtgaggtaaggattgc 2463829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 20822056 - 20821996
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||||||||||||||  |  ||||||||||||| ||||||||| |||||    
T  20822056 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgc 20821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 21041436 - 21041376
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||||||||||||| |||||||| | | |  ||||||||| || |||||||||||||    
T  21041436 tcttagaatttgtggttgtgcctaacataacttcgcaaaaccggtttgtgaggtgaggatt 21041376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 517
Target Start/End: Complemental strand, 25324355 - 25324311
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccgg 517  Q
    ||||||||| | ||||||| |||||||||||||| ||||||||||    
T  25324355 ttcttagaaatcgtggttgcgcctaacacagcctcacaaaaccgg 25324311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 53814930 - 53814990
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||| ||||||| ||  ||||||||| ||| |||||||||||||||    
T  53814930 ttagaaatcgtggttgggcttaacacaaccccacaaaaccgacttgtgaggtgaggattgc 53814990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 474 - 641
Target Start/End: Complemental strand, 11525082 - 11524917
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| |||||| ||||||||||||| ||| |||||||||| || || |||||| ||||| |||||  |||||||||| ||||  | || ||||| |    
T  11525082 tcttagaaattgtggatgggcctaacacaacctcacaaaaccggattgtggggtgagcattgcccctgcttataaacacttattcaaaccatctctcaac 11524983  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaat 641  Q
    | ||||||||||||||||||| | || |||||||||||||||||  | ||||||||||||||||||||    
T  11524982 cgatgtgggactctttaacac-ccccatcatgcccaacactatt-agacttggtgcgtggatataaat 11524917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 475 - 641
Target Start/End: Complemental strand, 11525296 - 11525132
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcc 574  Q
    ||||||| |||| | ||||||||||||| ||| |||||||||| || || |||||| ||||| |||||  |||||||||| ||||  | || ||||| ||    
T  11525296 cttagaaattgttgatgggcctaacacaacctcacaaaaccggattgtggggtgagcattgcccctgcttataaacacttattcaaaccatctctcaacc 11525197  T
Q  575 catgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaat 641  Q
     ||||||||||||||||||| | || |||||||||||||||||  | ||||||||||||||||||||    
T  11525196 gatgtgggactctttaacac-ccccatcatgcccaacactatt-agacttggtgcgtggatataaat 11525132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 545 - 642
Target Start/End: Original strand, 52676343 - 52676439
Alignment:
Q  545 ataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatg 642  Q
    |||||||||||||||  | || ||| |||| ||||||||||||||||||| | ||||||||| || ||||||| ||| ||||||||||||||||||||    
T  52676343 ataaacacttgttcataccatctcttatccaatgtgggactctttaacaccccccctcatgctcatcactatt-gggtttggtgcgtggatataaatg 52676439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 25137304 - 25137364
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  25137304 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgc 25137364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 589
Target Start/End: Original strand, 31181511 - 31181627
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    |||||||||||||||||||||||||||||| ||  | |||||| |||| ||||||||||||||| ||  |  |||||||| ||||||| | || ||| ||    
T  31181511 ttcttagaatttgtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttcaggccatctcttat 31181610  T
Q  573 cccatgtgggactcttt 589  Q
    || |||||| |||||||    
T  31181611 ccaatgtggaactcttt 31181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 644
Target Start/End: Original strand, 12325397 - 12325464
Alignment:
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||| |||||||||||||||||||||| | ||||||||||| ||||||||| |||||| |||||||||    
T  12325397 atgtgagactctttaacacacaccctcacgaccaacactatt-gggcttggttcgtggacataaatggt 12325464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 644
Target Start/End: Original strand, 12376538 - 12376605
Alignment:
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||| |||||||||||||||||||||| | ||||||||||| ||||||||| |||||| |||||||||    
T  12376538 atgtgagactctttaacacacaccctcacgaccaacactatt-gggcttggttcgtggacataaatggt 12376605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 38733468 - 38733405
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | || ||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  38733468 ttcttagaaatcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgc 38733405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 4113005 - 4113067
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  4113005 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 4113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 40079237 - 40079175
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  40079237 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 40079175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 530
Target Start/End: Complemental strand, 11234301 - 11234245
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgag 530  Q
    ||||| ||||||||||||||||||| ||| ||  |||||||||||||||||||||||    
T  11234301 tcttataatttgtggttgggcctaatacaaccccacaaaaccggcttatgaggtgag 11234245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 644
Target Start/End: Complemental strand, 17208773 - 17208706
Alignment:
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||| || ||||| |||||| |||||| ||||||||||||| |||||||||| |||||||||||||||    
T  17208773 atgtgagattctttcacacaccccctcacgcccaacactatt-gggcttggtgggtggatataaatggt 17208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 17452680 - 17452740
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  17452680 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 17452740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 51589075 - 51589015
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  51589075 ttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 51589015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 2859382 - 2859453
Alignment:
Q  465 aaatattattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||| ||| |||||||| | |||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||    
T  2859382 aaatgttactcttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgc 2859453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 644
Target Start/End: Original strand, 40188983 - 40189152
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    |||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||| |||||| | | ||| |  |||||||  | ||  |   || | ||||    
T  40188983 ttcttagaatttgtggttgggcctgacacaaccccacaaaaccgacttgtgagttgaggacttcccctacttataaacatatctttcggacatctttcat 40189082  T
Q  573 cccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
     | |||||| |||||  ||||||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  40189083 gcaatgtggaactctc-aacacacaccctcacatccaacactattggg-cttggtgcgtggatataaatggt 40189152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 40316051 - 40316110
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||| | ||||||||  |||||||| ||| ||||||||||||||||||||||||||||    
T  40316051 ttagaaatcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattg 40316110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 25145484 - 25145546
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||| |||||||| ||| ||||||||| ||| |||||||||||||||    
T  25145484 tcttagaaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgc 25145546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 31432229 - 31432291
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||||||| |||| ||  ||||||||||||| |||||||||||||||    
T  31432229 tcttagaaatcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggattgc 31432291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 35772114 - 35772052
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||||||||  ||||||||||||||    
T  35772114 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgc 35772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 35772349 - 35772287
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||| ||||||||    
T  35772349 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgc 35772287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 52650770 - 52650832
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| || ||||||||||||||||| ||  |||||||| |||| |||||||||||||||    
T  52650770 tcttagaaattatggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgc 52650832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 584 - 641
Target Start/End: Original strand, 8223420 - 8223476
Alignment:
Q  584 ctctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaat 641  Q
    ||||||||||||| ||||||  |||||||||||| ||||||||||| |||||||||||    
T  8223420 ctctttaacacacgccctcacacccaacactatt-gggcttggtgcatggatataaat 8223476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 25255396 - 25255335
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| ||||||||| ||||    
T  25255396 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgagaattg 25255335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 27413432 - 27413371
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||| ||||||||| ||| |||||| |||||| ||||||||||||||    
T  27413432 tcttagaaatcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattg 27413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 536
Target Start/End: Complemental strand, 38080680 - 38080627
Alignment:
Q  483 ttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||||| ||  ||||||| ||||| |||||||||||||||    
T  38080680 ttgtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgc 38080627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 536
Target Start/End: Original strand, 42586435 - 42586500
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||| | |||||||||||||||||| ||  ||||||  ||||| |||||||||||||||    
T  42586435 tattcttagaaatcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattgc 42586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 2859638 - 2859686
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||| |||||||| ||| ||||||||||||| |||||||||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 3169849 - 3169789
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  3169849 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgc 3169789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 31004442 - 31004498
Alignment:
Q  480 aatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||| ||||| || || ||||||||| |||| |||||||||||||||    
T  31004442 aatttgtggttgggtctaacgcaacccaacaaaaccagcttgtgaggtgaggattgc 31004498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 51589309 - 51589249
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||| ||||||||||| ||  ||||||||||||| |||||||||||||||    
T  51589309 ttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 51589249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 51589889 - 51589829
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  |||||| |||||| |||||||||||||||    
T  51589889 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgc 51589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 29898998 - 29898935
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | ||||||||||||| |||| ||| ||||||||||||| || |||||| |||||    
T  29898998 ttcttagaaatcgtggttgggcctagcacaacctcacaaaaccggcttgtgtggtgagaattgc 29898935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 8870909 - 8870971
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||| ||||||||| ||  |||||| |||||||||||||||| |||||    
T  8870909 tcttagaaatggtggttggacctaacacaaccccacaaaaacggcttatgaggtgagaattgc 8870971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 17452827 - 17452889
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||| ||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  17452827 tcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgc 17452889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 25145731 - 25145781
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||| ||||||| |||||||||||||||    
T  25145731 tggttgggcctaacacaaccccacaaatccggcttgtgaggtgaggattgc 25145781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 644
Target Start/End: Complemental strand, 25713478 - 25713310
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | |||||| ||||||||||| |   ||||||| ||||| |||||||| |||||| ||  |  |||||||| |  |||| | ||  |  |||    
T  25713478 tcttagaaatggtggttaggcctaacacaactccacaaaactggcttgtgaggtgacgattgcccccacttataaacacattgtcagaccatcacctatc 25713379  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||||||||| ||||| | |||||| | ||||||||||| ||||||||| |||||| |||||||||    
T  25713378 cgatgtgggactctt-aacaccccccctcacgaccaacactatt-gggcttggttcgtggacataaatggt 25713310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 26176993 - 26176931
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | | |||||||||||||||| ||  |||||||||| || |||||||||||||||    
T  26176993 tcttagaaatcgcggttgggcctaacacaaccccacaaaaccggtttttgaggtgaggattgc 26176931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 26177228 - 26177166
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||| || || |||||||||||||||    
T  26177228 tcttagaaatcgtggttgggcctaacacaaccccacaaaactggtttttgaggtgaggattgc 26177166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 26865357 - 26865419
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||| |||||| ||| ||  ||||||||||||| ||||||| |||||||    
T  26865357 tcttagaaattgtggttgagcctaatacaaccccacaaaaccggcttgtgaggtggggattgc 26865419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 33156818 - 33156756
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||||| || |||| ||||||||||    
T  33156818 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgagatgaggattgc 33156756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 538
Target Start/End: Complemental strand, 51590121 - 51590059
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctc 538  Q
    |||||| | ||| ||||||||||||||  |  ||||||||||||| |||||||||||||||||    
T  51590121 ttagaaatcgtgcttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggattgctc 51590059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 2997262 - 2997307
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| || | | |||||||||||||||||||||||||||||    
T  2997262 gggcctaactcatctttacaaaaccggcttatgaggtgaggattgc 2997307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 12244975 - 12245023
Alignment:
Q  488 gttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| ||||||||| ||  ||||||||||||| |||||||||||||||    
T  12244975 gttggacctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 12245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 533
Target Start/End: Original strand, 21626337 - 21626397
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggat 533  Q
    |||||||||  ||||||||||||||| ||||||  |||||||||| || ||| ||||||||    
T  21626337 ttcttagaaactgtggttgggcctaaaacagccccacaaaaccggattttgaagtgaggat 21626397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 39348365 - 39348413
Alignment:
Q  488 gttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||| ||  |||||||||| || |||||||||||||||    
T  39348365 gttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgc 39348413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 50695833 - 50695893
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||||||||| || |||||||| || ||  ||||||||||||| |||| ||||||||    
T  50695833 tcttagaatttgtgcttaggcctaactcaaccccacaaaaccggcttgtgagctgaggatt 50695893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 472 - 644
Target Start/End: Original strand, 30727115 - 30727286
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctca 571  Q
    |||||||||| |||||||||||||||||  | ||  |||||||| |||| ||||||||||||||| ||  |  |||||||||| ||| | | ||||||||    
T  30727115 attcttagaaattgtggttgggcctaacttaaccgtacaaaaccagcttgtgaggtgaggattgcccccacttataaacacttattctggccatttctca 30727214  T
Q  572 tcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
     || |||||  |||||||||||||| |||||| ||||||||||||| |||||| ||  |||||||||||||||    
T  30727215 accgatgtgtcactctttaacacaccccctcacgcccaacactatt-gggcttagtttgtggatataaatggt 30727286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 482 - 644
Target Start/End: Complemental strand, 47849867 - 47849708
Alignment:
Q  482 tttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttca-gtctatttctcatcccatgtg 580  Q
    |||||||||||||||| |||| ||  ||||||| ||||| ||||||||| ||||| ||  |  ||||||||  ||||| ||| || | | |||| |||||    
T  47849867 tttgtggttgggcctagcacaaccccacaaaactggcttgtgaggtgagtattgccccaacttataaacac--gttcatgtc-atcttttatccgatgtg 47849771  T
Q  581 ggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||||||||| ||| |||||| |||||| | |||| |||||||||||||||||||    
T  47849770 ggactctttaacacacaccttcacgcccaatactatt-gagcttagtgcgtggatataaatggt 47849708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 40746348 - 40746288
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  40746348 ttagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgc 40746288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 21054952 - 21055014
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  21054952 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 21055014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 25620221 - 25620159
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  25620221 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 25620159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 6991840 - 6991779
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| |||||||||||||||||||| ||| | ||||| |||||| |||||||||||||    
T  6991840 tcttagaaattgtggttgggcctaacacaacctcataaaactggcttaagaggtgaggattg 6991779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 31892475 - 31892411
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    ||||||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||| |||||    
T  31892475 tattcttagaaatcgtggttgggcctaacacatccccacaaaaccggcttgtgaggtgaagattg 31892411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 34027476 - 34027416
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  34027476 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 34027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 644
Target Start/End: Complemental strand, 1596913 - 1596745
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacac-ttgttcagtctatttctcat 572  Q
    |||||| | |||||||||||||||||||| ||  ||||||||||||| | ||||||||||||| ||  |  ||||| || ||||| || | || ||   |    
T  1596913 tcttagtaattgtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaaacattgtt-aggccatgtcctgt 1596815  T
Q  573 cccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||||| ||||||||||| |||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  1596814 ccgatgtgggactc-ttaacacacactctcacgaccagcactatt-gggcttggttcgtggacataaatggt 1596745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 32474586 - 32474523
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| ||||||||||||||||| ||  |  ||||||||||||| |||||||||||||||    
T  32474586 ttcttagaaattgtggttgggcctaacgcaaacccacaaaaccggcttgtgaggtgaggattgc 32474523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 48243071 - 48243122
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  48243071 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 48243122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 4886414 - 4886352
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| |||  | |||||||||| |||||||||||||||    
T  4886414 tcttagaaatcgtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgc 4886352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 31485658 - 31485720
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||| ||||||||||| | | ||||||||||||| | |||||||||||||    
T  31485658 tcttagaaattgtggttaggcctaacacaacttcacaaaaccggcttgtcaggtgaggattgc 31485720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 535
Target Start/End: Original strand, 32278895 - 32278945
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||| |||||    
T  32278895 gtggttgagcctaacacaacctcacaaaaccggcttatgaggtgacgattg 32278945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 47710528 - 47710466
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||| ||||| |||||||||||||||    
T  47710528 tcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgc 47710466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 47722184 - 47722122
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||| ||||| |||||||||||||||    
T  47722184 tcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgc 47722122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 23839079 - 23839136
Alignment:
Q  477 tagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||| |||| | ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  23839079 tagaaattgtcgatgggcctaacacaacctcacaaaaccggcttgtgaggtgaggatt 23839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 26028972 - 26029025
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||||| |||||||| ||| |||||| |||||| ||||||||||||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattgctcc 26029025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 29469688 - 29469628
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| | |||||||||||||    
T  29469688 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 29469628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 644
Target Start/End: Complemental strand, 29469923 - 29469757
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatccc 575  Q
    |||||| | |||||||||||||||||| |   ||||||||||||| | ||||||||||||| ||  |  |||||||| |  |||| | || ||   |||     
T  29469923 ttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggccatgtcctgtccg 29469824  T
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||| ||||||||| |||||| | ||| ||||||| ||||||| | |||||| |||||||||    
T  29469823 atgtgggactc-ttaacacaccccctcacgaccagcactatt-gggcttgattcgtggacataaatggt 29469757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 644
Target Start/End: Original strand, 33996120 - 33996246
Alignment:
Q  516 ggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcccaacacta 615  Q
    ||||| ||||||||||||||  ||  || |||||||| |  |||| | || ||| |||| ||||||||||||| ||| |||||||||| |  ||||||||    
T  33996120 ggcttgtgaggtgaggattgtccccacgtataaacacattgtcagacaatgtcttatccgatgtgggactctt-aactcacaccctcacgatcaacacta 33996218  T
Q  616 ttggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||| |||||| |||||||||    
T  33996219 tt-gggcttggttcgtggacataaatggt 33996246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 48661556 - 48661616
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||||| ||||||||  || ||||||||||||| |||||||||||||||    
T  48661556 ttagaaatcgtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgc 48661616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 2544457 - 2544508
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||  ||||||||| ||| |||||||||||||||    
T  2544457 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgc 2544508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 11211689 - 11211740
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||| |||||| ||  ||||||||||||| |||||||||||||||    
T  11211689 gtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgaggattgc 11211740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 22339604 - 22339663
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||| |||| ||||||||||||||| |||||  |||||||||| |||||| |||||||    
T  22339604 ttagaaattgtcgttgggcctaacacaacctaaataaaccggcttgtgaggttaggattg 22339663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 34027713 - 34027650
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | ||| |||||||||||||| ||  ||||||||||||| ||| |||||||||||    
T  34027713 ttcttagaaatcgtgattgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgc 34027650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 3038095 - 3038145
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||||||||||| ||| |||||||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgc 3038145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 6634928 - 6634878
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  |||||||  ||||||||||||||||||||    
T  6634928 tggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgc 6634878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 14540963 - 14541013
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||| |||||||    
T  14540963 tggttgggcctaacacaaccccacaaaaccgacttatgaggtgtggattgc 14541013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 21861379 - 21861317
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||||||||||||  |  ||||||||||||| | |||||||||||||    
T  21861379 tcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgc 21861317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 21861614 - 21861552
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||| |||||| | |||||||||||||    
T  21861614 tcttagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgc 21861552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 22574920 - 22574858
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||||||||||||  || |||||  |||||| |||||||||||||||    
T  22574920 tcttagaaatcgtggttgggcctaacacaaactcacaaatacggcttgtgaggtgaggattgc 22574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 26239915 - 26239977
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||||| |||||||| ||  |||| |||| ||| |||||||||||||||    
T  26239915 tcttagaaattgtggttgggtctaacacaaccccacaataccgacttgtgaggtgaggattgc 26239977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 32879613 - 32879675
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | || ||||||||||||||| ||   |||||||||||| |||||||||||||||    
T  32879613 tcttagaagtcgtcgttgggcctaacacaaccccgcaaaaccggcttgtgaggtgaggattgc 32879675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 36993085 - 36993139
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcct 540  Q
    ||||||||||||||||| ||  |||||||| |||| ||||||||| |||||||||    
T  36993085 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgagcattgctcct 36993139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 472 - 538
Target Start/End: Complemental strand, 41191101 - 41191035
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctc 538  Q
    ||||||||||  |||| |||| |||||||||  || ||||||||||||| ||| |||||||||||||    
T  41191101 attcttagaaactgtgattggacctaacacaatctcacaaaaccggcttgtgatgtgaggattgctc 41191035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 603 - 644
Target Start/End: Complemental strand, 32292711 - 32292671
Alignment:
Q  603 atgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  32292711 atgcccaacactattggg-cttggtgcgtggatatatatggt 32292671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 6782944 - 6782884
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||| |||||||||| ||  ||||||||||||| | |||||||||||||    
T  6782944 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 6782884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 644
Target Start/End: Complemental strand, 25620343 - 25620288
Alignment:
Q  588 ttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||| ||| | ||||||||||| ||||||||| |||||| |||||||||    
T  25620343 ttaacacacaccttcacgaccaacactatt-gggcttggttcgtggacataaatggt 25620288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 40746571 - 40746523
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||||| ||| ||||||| ||||| ||||||| |||||    
T  40746571 tggttgggcctaacacaacctcacaaaactggcttgtgaggtgtggatt 40746523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 519
Target Start/End: Original strand, 48420738 - 48420786
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggct 519  Q
    ||||||||||||| ||||||||||||| |||| ||  ||||||||||||    
T  48420738 tattcttagaattcgtggttgggcctagcacaaccccacaaaaccggct 48420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 473 - 644
Target Start/End: Complemental strand, 38476363 - 38476195
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    |||||||||||||||||| | ||||||||| ||  |||||| |||||| ||||||||||||| | ||  |  |||||||||| ||||| | || |||||     
T  38476363 ttcttagaatttgtggttagtcctaacacaaccccacaaaatcggcttgtgaggtgaggatttcccccacttataaacacttattcaggccatctctcaa 38476264  T
Q  573 cccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |  ||||||||||||| |   ||||||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  38476263 ctgatgtgggactcttca--ccacaccctcatgcccaaaaccatt-gggctaggtgcgtggatataaatggt 38476195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 617
Target Start/End: Original strand, 26208013 - 26208154
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatccc 575  Q
    |||||| |||||||||||||||||| | ||  |||||||||||||||||||||| || |||  | ||  |||| |||||| |||  |||  | ||||||     
T  26208013 ttagaaattgtggttgggcctaacataaccccacaaaaccggcttatgaggtgatgaatgcctccgcctataagcacttgctcatactaactatcatcca 26208112  T
Q  576 atgtgggactctttaacacacaccctcatgcccaacactatt 617  Q
    |||||||| ||||||||||||||||||| || ||||||||||    
T  26208113 atgtgggaatctttaacacacaccctcacgcacaacactatt 26208154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 559
Target Start/End: Complemental strand, 38475832 - 38475747
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttca 559  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||  |  |||||||||||||||    
T  38475832 tcttagaatttgtggttgggcctaacacaaccctacaaaaccggcttgtgaggtgaggattgcccccacttataaacacttgttca 38475747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 472 - 536
Target Start/End: Complemental strand, 27205051 - 27204987
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||| | |||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  27205051 attcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgc 27204987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 472 - 536
Target Start/End: Complemental strand, 27205149 - 27205085
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||| | |||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  27205149 attcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgc 27205085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 644
Target Start/End: Original strand, 8466558 - 8466655
Alignment:
Q  545 ataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||| | || ||| |||| |||||||| ||||||| |||| || ||||||||| ||||||| |||||||||||||| |||||||||||    
T  8466558 ataaacacttgttcagaccatctcttatccgatgtgggattctttaa-acaccccttcatgcccatcactatt-gggcttggtgcgtgcatataaatggt 8466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 644
Target Start/End: Original strand, 11232193 - 11232361
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | ||||||||||||| ||  |  |||||||| |  |||| | || ||   ||    
T  11232193 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggccatgtcctgtc 11232292  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||||||| ||||||||| |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  11232293 cgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 11232361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 27205245 - 27205183
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  27205245 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgc 27205183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 5590369 - 5590429
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||    
T  5590369 ttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgc 5590429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 603
Target Start/End: Complemental strand, 7730009 - 7729897
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggactcttta 590  Q
    ||||||||| || ||| ||||||||||||| ||||||||||||||| ||  |  |||||||| || |||| | || ||  |||  |||||||||||||||    
T  7730009 gggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatggtcaggccatctcatatctgatgtgggactcttta 7729910  T
Q  591 acacacaccctca 603  Q
    |||||||||||||    
T  7729909 acacacaccctca 7729897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 477 - 536
Target Start/End: Complemental strand, 4828375 - 4828316
Alignment:
Q  477 tagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  4828375 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 4828316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 6542003 - 6541940
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||| ||||||||||||||||  |  ||||||||||||| |||||||||||||    
T  6542003 tattcttagaatttgcggttgggcctaacacaaacccacaaaaccggcttgtgaggtgaggatt 6541940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 39960277 - 39960215
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  39960277 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 39960215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 42846604 - 42846666
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  42846604 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 42846666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 536
Target Start/End: Complemental strand, 8929101 - 8929040
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| |||||||||||||||||| ||  ||||||||||||| ||||||| |||||||    
T  8929101 cttagaattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattgc 8929040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 41790743 - 41790683
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||||||||||||| || | |||||||||||||||||||||||||||    
T  41790743 tcttagaaatcgtggttgggcctaacacaaccca-caaaaccggcttatgaggtgaggattg 41790683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 19256587 - 19256647
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 19256647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 24075307 - 24075367
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  24075307 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 24075367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 477 - 536
Target Start/End: Original strand, 26800514 - 26800573
Alignment:
Q  477 tagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||| || ||||||||||||    
T  26800514 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgtggtgaggattgc 26800573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 609
Target Start/End: Original strand, 29907761 - 29907860
Alignment:
Q  510 aaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgccca 609  Q
    ||||||| ||| ||||||||||||||  ||  |  |||||||| |  |||| |||| ||| |||| ||||||||||||||||||||||||||||| ||||    
T  29907761 aaaaccgacttgtgaggtgaggattgaccccacttataaacacattgtcagactatctcttatccgatgtgggactctttaacacacaccctcataccca 29907860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 35385809 - 35385872
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | ||||||| || ||||||| ||  |||||||||||||||||||||||||||||    
T  35385809 ttcttagaaatggtggttgagcttaacacaaccccacaaaaccggcttatgaggtgaggattgc 35385872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 35682779 - 35682842
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | |||||||||||||||||| ||  |||||||||||||  ||||||||||||||    
T  35682779 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgc 35682842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 44694699 - 44694754
Alignment:
Q  465 aaatattattcttagaatttgtggttgggcctaacacagcctaacaaaaccggctt 520  Q
    ||||||| |||||||||||||||||||||||||||||| ||  ||||||| |||||    
T  44694699 aaatattcttcttagaatttgtggttgggcctaacacaaccccacaaaactggctt 44694754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 535
Target Start/End: Complemental strand, 4828142 - 4828092
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||||||||||||| ||  ||||||||||||| ||||||||||||||    
T  4828142 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 4828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 10450085 - 10450023
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  10450085 tcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgc 10450023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 10884149 - 10884088
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| || | |||||||||||| |||||||||||||||    
T  10884149 tcttagaaatcgtggttgggcctaacacaaccca-caaaaccggcttgtgaggtgaggattgc 10884088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 11232428 - 11232490
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | |||||||||||||    
T  11232428 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 11232490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 18004107 - 18004157
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  18004107 tggttgggcctaacacaacctcacaaaaccgacttatggggtgaggattgc 18004157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 18939296 - 18939358
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||| |||||| | |||| |||||||||||||||    
T  18939296 tcttagaaatggtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgc 18939358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 20301346 - 20301284
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||| ||||||| ||||| |||||| ||||||||    
T  20301346 tcttagaaatcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgc 20301284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 21087978 - 21087916
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||| ||||||| ||||| |||||| ||||||||    
T  21087978 tcttagaaatcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgc 21087916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 591
Target Start/End: Original strand, 22638177 - 22638295
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    ||||||||| | |||||||||| ||||||| ||  ||||||||||||| || |||||||||||| ||| |  ||||||||||   ||| | || ||| ||    
T  22638177 ttcttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttataaacactttgacaggccatctcttat 22638276  T
Q  573 cccatgtgggactctttaa 591  Q
    || ||||| ||||||||||    
T  22638277 ccgatgtgagactctttaa 22638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 582 - 644
Target Start/End: Original strand, 37867939 - 37868000
Alignment:
Q  582 gactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||||||| | ||||||||||| || |||||| |||||| |||||||||    
T  37867939 gactctttaacacacaccctcacgaccaacactatt-ggccttggttcgtggacataaatggt 37868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 582 - 644
Target Start/End: Original strand, 37868179 - 37868240
Alignment:
Q  582 gactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||  |||||| |||||||||    
T  37868179 gactctttaacacacaccctcacgaccaacactatt-gggcttggctcgtggacataaatggt 37868240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 39052928 - 39052990
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | || ||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  39052928 tcttagaaatcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 39052990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 529
Target Start/End: Complemental strand, 4963437 - 4963384
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtga 529  Q
    |||||| |||||||||||||||||||| ||  ||||||||||||| ||||||||    
T  4963437 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 4963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 536
Target Start/End: Original strand, 5931945 - 5932010
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| || | |||||||||||||||| | ||  ||||||||||||| |||||||||||||||    
T  5931945 tattcttaaaaatggtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgc 5932010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 10454511 - 10454450
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | ||||||| |||||||||| ||  ||||||||||||| ||||||||||||||    
T  10454511 tcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattg 10454450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 37001549 - 37001488
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| ||| ||||||||||    
T  37001549 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgtgaggattg 37001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 644
Target Start/End: Original strand, 39052790 - 39052861
Alignment:
Q  571 atcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||| ||||||||||||| ||||||| |||||| | ||||||||||| ||||||||| |||||| |||||||||    
T  39052790 atccgatgtgggactctt-aacacaccccctcacgaccaacactatt-gggcttggttcgtggacataaatggt 39052861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 45031373 - 45031422
Alignment:
Q  487 ggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||| ||| ||||||||||||| | |||||||||||||    
T  45031373 ggttgggcctaacacaaccttacaaaaccggcttgtaaggtgaggattgc 45031422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 619
Target Start/End: Original strand, 10615035 - 10615083
Alignment:
Q  571 atcccatgtgggactctttaacacacaccctcatgcccaacactattgg 619  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||    
T  10615035 atccgatgtgggactctttaacacacaccctcacaaccaacactattgg 10615083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 17469901 - 17469841
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  17469901 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 17469841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 17477148 - 17477088
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  17477148 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 17477088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 19256821 - 19256881
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  |||||||| |||| |||||||||||||||    
T  19256821 ttagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgc 19256881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 644
Target Start/End: Original strand, 39052638 - 39052704
Alignment:
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||| ||||||| |||||| | ||||||||||| ||||||||| |||||| |||||||||    
T  39052638 atgtgggactctt-aacacaccccctcacgaccaacactatt-gggcttggttcgtggacataaatggt 39052704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 39743612 - 39743552
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  |||||| |||||| |||||||||||||||    
T  39743612 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgc 39743552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 589
Target Start/End: Original strand, 44931204 - 44931296
Alignment:
Q  497 aacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggactcttt 589  Q
    |||||| ||| ||||||||||||| ||||| ||||||||| ||  |  |||||||||| ||||| | || ||||| || ||||||||||||||    
T  44931204 aacacatccttacaaaaccggcttgtgaggcgaggattgcccccacttataaacacttattcaggccatctctcaaccgatgtgggactcttt 44931296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Complemental strand, 37001300 - 37001249
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| |   ||||||||||||| |||||||||||||||    
T  37001300 gtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgc 37001249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 422452 - 422514
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||||||| |||||| ||  |||||| ||||||||||| ||| ||||||    
T  422452 tcttagaaattgtggttgggccaaacacaaccccacaaaatcggcttatgagctgatgattgc 422514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 6559448 - 6559510
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| |||||||||||||| | |||| | ||| ||||||||||||| | |||||||||||||    
T  6559448 tcttaaaatttgtggttgggacgaacataacctcacaaaaccggcttgtaaggtgaggattgc 6559510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 8716187 - 8716137
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||| ||  |||||| ||||||||||||||||||||||    
T  8716187 tggttgggtctaacacaaccccacaaaatcggcttatgaggtgaggattgc 8716137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 12317131 - 12317069
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||||||||||||  |  |||||| | ||||||||||||||||||||    
T  12317131 tcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgc 12317069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 12547183 - 12547121
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | || ||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  12547183 tcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgc 12547121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 24532432 - 24532482
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgc 24532482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 536
Target Start/End: Original strand, 38447442 - 38447488
Alignment:
Q  490 tgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  38447442 tgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 38447488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 42049686 - 42049748
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||| |||||| |||| ||| ||||||||||||| || ||||||||||||    
T  42049686 tcttagaaatcgtggttaggcctaccacaacctcacaaaaccggcttgtggggtgaggattgc 42049748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 593
Target Start/End: Original strand, 12022386 - 12022506
Alignment:
Q  475 cttagaatttgtgg--ttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    ||||||||||||||  |||||||||||||| ||   |||||| ||||| | ||||||||||| |  || |  ||||||||||||| || | |  ||| ||    
T  12022386 cttagaatttgtggacttgggcctaacacatccccgcaaaactggcttgtaaggtgaggatttccgctacttataaacacttgttgaggccacctcttat 12022485  T
Q  573 cccatgtgggactctttaaca 593  Q
    || ||||||||||||||||||    
T  12022486 ccaatgtgggactctttaaca 12022506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 20702861 - 20702820
Alignment:
Q  495 ctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||| |||||||||||||||||| ||||||||||    
T  20702861 ctaacacaacctcacaaaaccggcttatgagatgaggattgc 20702820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 31079809 - 31079862
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctc 538  Q
    ||||||| | |||||||||||  ||||||| ||||| |||||||||||||||||    
T  31079809 gtggttgagtctaacacagccccacaaaactggcttttgaggtgaggattgctc 31079862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 7267466 - 7267526
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||||| |||||||| ||  ||||||||||||| |||||||| ||||||    
T  7267466 ttagaaatggtggttgggtctaacacaaccctacaaaaccggcttgtgaggtgatgattgc 7267526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 34842761 - 34842701
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||| |||||||||| ||  ||||||||| | |||||||||||||||||    
T  34842761 ttagaaatcgtggttgagcctaacacaaccccacaaaaccgacctatgaggtgaggattgc 34842701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 539
Target Start/End: Complemental strand, 34843181 - 34843137
Alignment:
Q  495 ctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||||| ||  ||||||||||||| ||||||||||||||||||    
T  34843181 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgctcc 34843137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 479 - 593
Target Start/End: Complemental strand, 7369804 - 7369690
Alignment:
Q  479 gaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatg 578  Q
    |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||| ||| ||  |  |||||||||||||||  | || ||| |||| |||    
T  7369804 gaatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttataaacacttgttcatgccatctcttatccaatg 7369705  T
Q  579 tgggactctttaaca 593  Q
    |||||||||||||||    
T  7369704 tgggactctttaaca 7369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 534
Target Start/End: Original strand, 18333462 - 18333524
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||    
T  18333462 attcttagaatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 18333524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 474 - 644
Target Start/End: Original strand, 41666756 - 41666924
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||  |  |||||||| |  |||| | || ||   ||    
T  41666756 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggccatgtcctgtc 41666855  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||||||| ||||||||| |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  41666856 cgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 41666924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 15480644 - 15480583
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| |||||||||||||||||||| ||  ||||||||||||| ||||||||||||||    
T  15480644 tcttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 15480583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 28510177 - 28510114
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | |||||||||||||||||| ||  |||||||||||||||||| ||||||||||    
T  28510177 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgagatgaggattgc 28510114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 644
Target Start/End: Original strand, 24346500 - 24346668
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| ||||||||| |||||||||| ||  | ||||||||||| ||||||||||||| | ||  |  |||||||| |  |||| | || ||  |||    
T  24346500 tcttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcaggccatgtcctatc 24346599  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||||||| ||||||||| |||||| | ||| ||||||| | ||||||| |||||| |||||||||    
T  24346600 cgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gagcttggttcgtggacataaatggt 24346668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 25258093 - 25258155
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  25258093 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 25258155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 25321883 - 25321945
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  25321883 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 25321945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 41666992 - 41667054
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  41666992 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 41667054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 536
Target Start/End: Complemental strand, 9368679 - 9368618
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| || ||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  9368679 cttagaaattatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 9368618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 8287884 - 8287824
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| |||||||||||||||||||| ||  ||||||||||||| ||||||| |||||||    
T  8287884 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtggggattgc 8287824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 18333698 - 18333758
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||||| |||||||||||||||||| ||  ||||||||||||| |||||||| ||||    
T  18333698 tcttagaattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgacgatt 18333758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 27132994 - 27133054
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  27132994 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 27133054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 522
Target Start/End: Original strand, 30588855 - 30588903
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttat 522  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  30588855 tcttagaatttgtggttgggccttacacaacccaacaaaaccggcttat 30588903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 644
Target Start/End: Original strand, 8081124 - 8081281
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg-ctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggac 584  Q
    ||||||||||||||||| ||  ||||||||||||| |||| ||||||||| | ||  |  |||||||| |  |||| | || ||  |||| |||||||||    
T  8081124 tggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccccacttataaacacattgtcaggccatgtcctatccgatgtgggac 8081223  T
Q  585 tctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||| |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  8081224 tc-ttaacacaccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 8081281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 539
Target Start/End: Complemental strand, 42295662 - 42295599
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||| |||| ||||||||||||||| |   ||||||||||||| ||||||||||||||||||    
T  42295662 ttagaaattgtcgttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgctcc 42295599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 535
Target Start/End: Original strand, 95260 - 95326
Alignment:
Q  469 attattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||| ||||||||||  ||||||||||||||||| ||  ||||||||||||| |||| |||||||||    
T  95260 attactcttagaattcttggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattg 95326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 9682315 - 9682361
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggctt 520  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  9682315 tcttagaatttgtggttggacctaacacaacctcacaaaaccggctt 9682361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 19705988 - 19705926
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| |   ||||||||||||||| |||||||||||||    
T  19705988 tcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttataaggtgaggattgc 19705926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 644
Target Start/End: Original strand, 24269870 - 24270037
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| ||||||||| |||||||||| ||  | ||||||||||| ||||||||||||| | ||  |  |||||||| |  |||| | || ||  |||    
T  24269870 tcttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattac-cccacttataaacacattgtcaggccatgtcctatc 24269968  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||||||| ||||||||| |||||| | ||| ||||||| | ||||||| |||||| |||||||||    
T  24269969 cgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gagcttggttcgtggacataaatggt 24270037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 534
Target Start/End: Original strand, 24487646 - 24487704
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||| | |||||||||| ||||||| ||| ||||||||||||| |||||||||||||    
T  24487646 ttagaaatcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggatt 24487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 24528613 - 24528563
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 24528563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 170563 - 170608
Alignment:
Q  487 ggttgggcctaacacagcctaacaaaaccggcttatgaggtgagga 532  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||    
T  170563 ggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagga 170608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 531
Target Start/End: Original strand, 12151910 - 12151967
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgagg 531  Q
    ||||||||| |||||| | |||||||||| ||| ||||||||||||| ||||||||||    
T  12151910 tcttagaatatgtggtagcgcctaacacaacctcacaaaaccggcttgtgaggtgagg 12151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 599 - 644
Target Start/End: Complemental strand, 30494710 - 30494666
Alignment:
Q  599 cctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  30494710 cctcatgcccaacactattgga-cttggtgcgtggatataaatggt 30494666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 599 - 644
Target Start/End: Complemental strand, 30535053 - 30535009
Alignment:
Q  599 cctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  30535053 cctcatgcccaacactattgga-cttggtgcgtggatataaatggt 30535009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 30758315 - 30758360
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| || ||| |||||||||||||||||||||||||||||    
T  30758315 gggcctaactcatccttacaaaaccggcttatgaggtgaggattgc 30758360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 8098400 - 8098340
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||| ||||||| ||  ||||||||||||| |||||||||||||||    
T  8098400 ttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattgc 8098340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 29909722 - 29909782
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| |   ||||||||||||| |||||||||||||||    
T  29909722 ttagaaatggtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgc 29909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 60172 - 60110
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||| ||||| |||||| | ||  ||||||||||||| |||||||||||||||    
T  60172 tcttagaaattgtgattgggtctaacataaccccacaaaaccggcttgtgaggtgaggattgc 60110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 472 - 534
Target Start/End: Complemental strand, 12034777 - 12034715
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||||| | ||||||||||||||||||  |  ||||||| ||||| |||||||||||||    
T  12034777 attcttagaaatcgtggttgggcctaacacaatcctacaaaactggcttgtgaggtgaggatt 12034715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 13296757 - 13296696
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| || | |||||| ||||| |||||||||||||||    
T  13296757 tcttagaaatcgtggttgggcctaacacaaccca-caaaactggcttgtgaggtgaggattgc 13296696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 15480407 - 15480345
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||| | ||  |||||||| |||| |||||||||||||||    
T  15480407 tcttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgc 15480345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 17352434 - 17352496
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||| ||||||| || ||| ||||||||||||| |||||||| ||||||    
T  17352434 tcttagaagtggtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgc 17352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 24531684 - 24531622
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||| ||||||| ||  |||||| |||||| |||||||||||||||    
T  24531684 tcttagaaatcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgc 24531622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Complemental strand, 7092221 - 7092172
Alignment:
Q  487 ggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||| ||  ||||||| ||||| |||||||||||||||    
T  7092221 ggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgc 7092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 30770065 - 30770110
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| || ||| |||||||||| ||||||||||||||||||    
T  30770065 gggcctaactcatccttacaaaaccggtttatgaggtgaggattgc 30770110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 31974289 - 31974236
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    ||||||||||||||||| ||  ||||||| ||||| || |||||||||||||||    
T  31974289 tggttgggcctaacacaaccccacaaaactggcttgtgcggtgaggattgctcc 31974236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 38731837 - 38731898
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | ||||||| |||||||||| ||| |||||| || ||| ||||||||||||||    
T  38731837 tcttagaaatggtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattg 38731898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 576 - 644
Target Start/End: Original strand, 6919295 - 6919361
Alignment:
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||| |||||||||| ||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  6919295 atgtgggactctt-aacacacaccatcacgaccagcactatt-gggcttggttcgtggacataaatggt 6919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 644
Target Start/End: Complemental strand, 31974415 - 31974357
Alignment:
Q  584 ctctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||| |||||||| ||||||  ||||||||||||||| ||||||| |||||||||||||||    
T  31974415 ctctgtaacacac-ccctcacacccaacactattggg-cttggtgtgtggatataaatggt 31974357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 644
Target Start/End: Original strand, 5711436 - 5711606
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctca 571  Q
    |||||||||| | |||||||||||||||||| ||  ||||||||||||| | ||||||||||||| ||  |  |||||||| |  |||| | |||||       
T  5711436 attcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacattgtcaggccatttcctt 5711535  T
Q  572 tcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||| ||||||||||| ||||||||| |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  5711536 tccgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 5711606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 475 - 641
Target Start/End: Original strand, 21383284 - 21383454
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaa--ccggcttatgaggtgaggattgctcctgcgc----ataaacacttgttcagtctatttc 568  Q
    ||||||| |||||||||||||||||||| ||  ||||||  ||||||| ||||||||||||||| ||  | |    |||||||| ||||||| |||| |     
T  21383284 cttagaaattgtggttgggcctaacacaaccccacaaaaaaccggcttgtgaggtgaggattgccccc-cacttatataaacacgtgttcagactatctt 21383382  T
Q  569 tcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaat 641  Q
    | |||| ||| ||||||||||||||||| ||||||  |||| ||||||| | |||||||||||||||||||||    
T  21383383 ttatccgatgcgggactctttaacacaccccctcacacccaccactatt-gtgcttggtgcgtggatataaat 21383454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 474 - 644
Target Start/End: Complemental strand, 16419587 - 16419419
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||  |  |||||||| |  |||| | || ||  |||    
T  16419587 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagaccatgtcctatc 16419488  T
Q  574 ccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    | ||||||||||| ||||||||| |||||| | ||| ||||||| | ||||||| |||||| |||||||||    
T  16419487 cgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gagcttggttcgtggacataaatggt 16419419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 593
Target Start/End: Complemental strand, 13210611 - 13210492
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    ||||||||||||||||||||||||||||  ||  ||||||||| | | ||||||||||||||| |   |  ||||||| | |||||| | || ||||||     
T  13210611 tcttagaatttgtggttgggcctaacacgaccccacaaaaccgacctgtgaggtgaggattgccctctcttataaacattcgttcaggccatctctcatt 13210512  T
Q  574 ccatgtgggactctttaaca 593  Q
    | ||||||||||||||||||    
T  13210511 caatgtgggactctttaaca 13210492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 17719485 - 17719423
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||    
T  17719485 tcttagaaattgtggttgggccgaacacaacccgacaaaaccggcttgtgaggtgaggattgc 17719423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 40379208 - 40379270
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  40379208 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 40379270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 40379443 - 40379505
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  40379443 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 40379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 13210841 - 13210780
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||||||||||||||||||| |  | ||||| ||| |||||||||||||||    
T  13210841 ttcttagaatttgtggttgggcctaacacagtcccaaaaaactggcatatgaggtgaggatt 13210780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 539
Target Start/End: Original strand, 14466409 - 14466474
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | ||||||||||||||||    
T  14466409 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgctcc 14466474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 536
Target Start/End: Complemental strand, 2324314 - 2324263
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  2324314 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 2324263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 19191611 - 19191670
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| ||||||||||||||    
T  19191611 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 19191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 2029854 - 2029792
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||| ||| ||  ||||||||||||| |||||||||||||||    
T  2029854 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgc 2029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 2030089 - 2030027
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||| ||| ||  ||||||||||||| |||||||||||||||    
T  2030089 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgc 2030027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 588
Target Start/End: Complemental strand, 8227434 - 8227320
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||||||||||||||| |||||| | ||  ||||||||| ||  | ||||||||||||| ||  |  |||||||||||||||  | || |||||||    
T  8227434 tcttagaatttgtggttgggactaacataaccctacaaaaccgcctcgtaaggtgaggattgcccccacttataaacacttgttcatgccatctctcatc 8227335  T
Q  574 ccatgtgggactctt 588  Q
    | ||||| |||||||    
T  8227334 caatgtgtgactctt 8227320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 28407792 - 28407854
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| |   ||||||||||||| |||||||||||||||    
T  28407792 tcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgc 28407854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 567 - 644
Target Start/End: Complemental strand, 13210754 - 13210679
Alignment:
Q  567 tctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||| ||||||||||||||||||||| |||||| | ||||||||||| | |||||||| |||| | ||||||||    
T  13210754 tctcatccaatgtgggactctttaacacaccccctcacg-ccaacactatt-gagcttggtgtgtgggtgtaaatggt 13210679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 536
Target Start/End: Complemental strand, 29718412 - 29718351
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| | |||||| ||||||||||| ||  ||||||||||||| |||||||||||||||    
T  29718412 cttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 29718351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 5450492 - 5450544
Alignment:
Q  477 tagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtga 529  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||| ||||||||    
T  5450492 tagaatttgtggttgggcctaagacaaccccacaaaaccggcttgtgaggtga 5450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 32884178 - 32884130
Alignment:
Q  488 gttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  32884178 gttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 32884130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 644
Target Start/End: Original strand, 33606087 - 33606221
Alignment:
Q  508 acaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggactctttaacacacaccctcatgcc 607  Q
    |||||||||| || ||||||||||||||| ||| |  |||||||| | ||||| | || ||  |||| ||||||||||| |||||||||  ||||| | |    
T  33606087 acaaaaccggtttgtgaggtgaggattgcccctacttataaacacattttcaggccatctcctatccgatgtgggactc-ttaacacaccacctcacgac 33606185  T
Q  608 caacactattggggcttggtgcgtggatataaatggt 644  Q
    || |||||||  |||||||| |||||| |||||||||    
T  33606186 catcactatt-aggcttggttcgtggacataaatggt 33606221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Complemental strand, 2324548 - 2324497
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  2324548 gtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 2324497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 37769953 - 37770004
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| |||||||| ||  |||||||||||||||||||||| ||||||    
T  37769953 gtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgc 37770004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 5711674 - 5711736
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | |||||| ||||||    
T  5711674 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttttaaggtgatgattgc 5711736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 532
Target Start/End: Complemental strand, 16419352 - 16419294
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgagga 532  Q
    |||||||| | |||||||||||||| ||| ||  ||||||||||||| |||||||||||    
T  16419352 tcttagaaatcgtggttgggcctaatacaaccccacaaaaccggcttgtgaggtgagga 16419294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 17719651 - 17719589
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||||| || |||||| ||||||||    
T  17719651 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtcaggattgc 17719589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 27897605 - 27897667
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||| ||| ||||||||| |||||    
T  27897605 tcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgagaattgc 27897667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 37840422 - 37840360
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| || ||||||||||||| |||||| ||  ||||||||||||| |||||||| ||||||    
T  37840422 tcttaaaaattgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgatgattgc 37840360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 536
Target Start/End: Complemental strand, 21591866 - 21591805
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| | |||||||||||||||||| ||  | ||||||| |||||||||||| ||||||    
T  21591866 cttagaaatcgtggttgggcctaacacaaccccataaaaccgacttatgaggtgaagattgc 21591805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 533
Target Start/End: Original strand, 27897504 - 27897561
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggat 533  Q
    |||||| | ||||||| |||||||||| ||| | ||||||||||| ||||||||||||    
T  27897504 ttagaaatggtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 644
Target Start/End: Original strand, 31001839 - 31001915
Alignment:
Q  567 tctcatcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||| || ||||| || ||| |||||||| |  ||||||||| |||||||||| |||||| ||||||||||||||||    
T  31001839 tctcaaccgatgtgagattctctaacacacccattcatgcccatcactattggg-cttggttcgtggatataaatggt 31001915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Complemental strand, 40010077 - 40010032
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||| ||| ||||||||||||| | |||||||||||||    
T  40010077 gggcctaacacatccttacaaaaccggcttgtaaggtgaggattgc 40010032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 536
Target Start/End: Original strand, 93737 - 93781
Alignment:
Q  492 ggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| || ||| ||||||||||||| |||||||||||||||    
T  93737 ggcctaactcatcctcacaaaaccggcttgtgaggtgaggattgc 93781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 5509152 - 5509104
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||||| ||  |||||||| |||| |||||||||||||    
T  5509152 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggatt 5509104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 536
Target Start/End: Original strand, 15124545 - 15124609
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| || | ||||||||| |||||||| ||  |||||| |||||||||||||| |||||||    
T  15124545 attcttaaaaatcgtggttgggtctaacacaaccccacaaaatcggcttatgaggtggggattgc 15124609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 17854930 - 17854990
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||||| ||| |||| ||  ||||||||||||| |||||||||||||||    
T  17854930 ttagaaatcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgc 17854990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 594
Target Start/End: Original strand, 19570973 - 19571093
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | ||||||||||||||||||     |||||| || ||||||||||||||||||| ||  |  |||||||| ||||||||  |||  |  ||    
T  19570973 tcttagaaatcgtggttgggcctaacacaattccacaaaatcgacttatgaggtgaggattgcccccacttataaacacatgttcagttcattatttgtc 19571072  T
Q  574 ccatgtgggactctttaacac 594  Q
    | ||||| |||||||||||||    
T  19571073 cgatgtgagactctttaacac 19571093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 526
Target Start/End: Original strand, 27036426 - 27036466
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgagg 526  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  27036426 tggttgggcctaacacaaccctacaaaaccggcttatgagg 27036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 33456078 - 33456019
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||| ||||||||||||| || ||| |||||||||| || | |||||||||||||    
T  33456078 ttagaatttg-ggttgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 33456019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 473 - 644
Target Start/End: Original strand, 4868575 - 4868744
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    ||||||||| | |||||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||  |  |||||||| |  |||| | || ||   |    
T  4868575 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggccatgtcctgt 4868674  T
Q  573 cccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||||| ||||||||| |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  4868675 ccgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 4868744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 11721990 - 11721928
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  11721990 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgc 11721928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 536
Target Start/End: Original strand, 25065087 - 25065155
Alignment:
Q  468 tattattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||| | || ||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  25065087 tattattcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 25065155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 4868812 - 4868874
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  4868812 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 4868874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 8001549 - 8001611
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||||||||||||||| || ||||||| || |||||||||||| ||||||    
T  8001549 tcttagaaattgtggttgggcctaacacaacccaacaaaatcgacttatgaggtgaagattgc 8001611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 534
Target Start/End: Complemental strand, 27656541 - 27656483
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||| |||||||||||||||||||| ||  ||||||||||||| |||||||||||||    
T  27656541 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 27656483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 33494624 - 33494562
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  33494624 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 33494562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 536
Target Start/End: Complemental strand, 8026692 - 8026627
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||| |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  8026692 tattattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 8026627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 13741001 - 13740936
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||||| |||||||||||||||||||| ||  ||||||||| ||| ||| ||||||||||||||    
T  13741001 tcttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcc 13740936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 13746501 - 13746436
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||||| |||||||||||||||||||| ||  ||||||||| ||| ||| ||||||||||||||    
T  13746501 tcttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcc 13746436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 8026472 - 8026412
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  8026472 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 8026412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 12330180 - 12330240
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||    
T  12330180 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgc 12330240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 12330292 - 12330352
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||| ||||||||||||| |||| ||||||||||    
T  12330292 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgc 12330352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 30256895 - 30256835
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  30256895 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 30256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 3713427 - 3713365
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||| |||||||||| ||| |||||| |||||| ||| |||||||||||    
T  3713427 tcttagaaattgtggttgtgcctaacacaaccttacaaaatcggcttttgatgtgaggattgc 3713365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 9705339 - 9705277
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||| |||||||| ||  ||||||||||||| |||||||||||||||    
T  9705339 tcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 9705277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 13353286 - 13353224
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | |||||||||||||    
T  13353286 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 13353224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 33796411 - 33796349
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | |||||||||||||    
T  33796411 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 33796349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 5648671 - 5648732
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| || ||||||| ||||||||| ||| ||||||||||||| |||||||| |||||    
T  5648671 tcttagaaattatggttggacctaacacaacctcacaaaaccggcttgtgaggtgatgattg 5648732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 644
Target Start/End: Original strand, 12329954 - 12330111
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacac-ttgttcagtctatttctcatcccatgtggga 583  Q
    |||||||||||||||||| ||| |||||| | |||| ||||||||||||||| ||  |  |||||||| |||||   || || ||| |||| ||||||||    
T  12329954 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacattgttatatc-atatcttatccgatgtggga 12330052  T
Q  584 ctctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||| ||||||||| |||||| | ||| || || | ||||||||| |||||| |||||||||    
T  12330053 ctc-ttaacacaccccctcacgaccagca-taattgggcttggttcgtggacataaatggt 12330111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 8566960 - 8567019
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||| | |||||||||||||||||| ||  |||||||||| || ||||||||||||||    
T  8566960 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattg 8567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 19713038 - 19712975
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| | ||||||||||||||||||  |  ||||||||||||| ||||||||| |||||    
T  19713038 ttcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgc 19712975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 6623409 - 6623471
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||| ||||||||| ||  ||||||||||||| | |||||||||||||    
T  6623409 tcttagaaatcgtggttggacctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 6623471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 9705105 - 9705043
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||| ||| |||||||| ||||||    
T  9705105 tcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgc 9705043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 644
Target Start/End: Complemental strand, 12268988 - 12268943
Alignment:
Q  598 ccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||||    
T  12268988 ccctcatgcccaacactatt-gggtttggtgcgtgtatataaatggt 12268943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 539
Target Start/End: Original strand, 16722817 - 16722871
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcc 539  Q
    |||||||||||||||||| ||  |||||| |||||| ||||||||| ||||||||    
T  16722817 gtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgctcc 16722871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 17147659 - 17147721
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||| ||||||| | ||  ||||||||||||| |||||||||||||||    
T  17147659 tcttagaaatggtggttggacctaacataaccccacaaaaccggcttgtgaggtgaggattgc 17147721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 536
Target Start/End: Original strand, 28867972 - 28868018
Alignment:
Q  490 tgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  28867972 tgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 28868018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 19639112 - 19639173
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||| ||||||||||||  || ||||||| || ||||||||||||||    
T  19639112 tcttagaaatcgtggttggacctaacacagccccactaaaccggtttgtgaggtgaggattg 19639173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 19712801 - 19712737
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacag--cctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||||||||||||   ||  ||||||||||||| |||||||||||||||    
T  19712801 tcttagaaatggtggttgggcctaacacacaaccccacaaaaccggcttgtgaggtgaggattgc 19712737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 536
Target Start/End: Complemental strand, 30256662 - 30256601
Alignment:
Q  475 cttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||| | |||||||||||||||||| ||  |||||||||| || |||| ||||||||||    
T  30256662 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgc 30256601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 2753331 - 2753283
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    ||||||||||||||||| ||  ||||||||| ||| |||||||||||||    
T  2753331 tggttgggcctaacacaaccccacaaaaccgccttgtgaggtgaggatt 2753283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 533
Target Start/End: Original strand, 5572394 - 5572442
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggat 533  Q
    |||||||||||||||||| ||  ||||||||| ||| ||||||||||||    
T  5572394 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggat 5572442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 21690805 - 21690745
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | ||||||| |||||||||| ||  |||||| |||||| |||||||||||||||    
T  21690805 ttagaaatcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgc 21690745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 27772797 - 27772737
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||| ||||||||| |   ||||||||||||| |||||||||||||||    
T  27772797 ttagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgc 27772737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 644
Target Start/End: Complemental strand, 2237 - 2068
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcat 572  Q
    ||||||||| | |||||||||||||||||| ||  ||||||||||||| | ||||||||||||| ||  |  |||||||| |  |||| | || ||   |    
T  2237 ttcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggccatgtcctgt 2138  T
Q  573 cccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    || ||||||||||| ||||||||| |||||| | ||| ||||||| ||||||||| |||||| |||||||||    
T  2137 ccgatgtgggactc-ttaacacaccccctcacgaccagcactatt-gggcttggttcgtggacataaatggt 2068  T

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Target: scaffold0519; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 2001 - 1939
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| | |||||||||||||    
T  2001 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 8019053 - 8018991
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  8019053 tcttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 8018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 22729185 - 22729123
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||    
T  22729185 tcttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgc 22729123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 45828104 - 45828042
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||    
T  45828104 tcttagaaattgtggtagggcctaacacaacctcacaaaaccggcttgtgaggtgaggattgc 45828042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 472 - 644
Target Start/End: Original strand, 35038191 - 35038361
Alignment:
Q  472 attcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctca 571  Q
    |||||||||| | |||||||||||||||||| ||  ||||||||||||| ||||||||||||| | ||  |  |||||||| |  |||| | ||  |  |    
T  35038191 attcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcaggccatcaccta 35038290  T
Q  572 tcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||| ||||||||||| ||||||||| |||||| | |||  |||||| ||||||||| |||||| |||||||||    
T  35038291 tccgatgtgggactc-ttaacacaccccctcacgaccagtactatt-gggcttggttcgtggacataaatggt 35038361  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 1723075 - 1723137
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  1723075 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 1723137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 4155409 - 4155347
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  4155409 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgc 4155347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 24866282 - 24866220
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  24866282 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 24866220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 644
Target Start/End: Original strand, 22775494 - 22775566
Alignment:
Q  571 atcccatgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||| ||||||||||| | |||||||  ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  22775494 atccaatgtgggactcctaaacacaccacctcatgcccaacactatt-gggattggtgcatggatataaatggt 22775566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 11589868 - 11589808
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  11589868 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 11589808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 54567977 - 54567917
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||    
T  54567977 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 54567917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 20327624 - 20327675
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  20327624 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 20327675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 4155645 - 4155583
Alignment:
Q  473 ttcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    ||||||||| | |||||||||||||||||| ||  | ||||||||||| ||||||||||||||    
T  4155645 ttcttagaaatcgtggttgggcctaacacaaccctaaaaaaccggcttttgaggtgaggattg 4155583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 534
Target Start/End: Original strand, 13574922 - 13574980
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||||||||    
T  13574922 ttagaaattgtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggatt 13574980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 20327860 - 20327910
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 20327910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 34610646 - 34610584
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| ||||||||||| |||||||| ||  ||||||||| ||| |||||||||||||||    
T  34610646 tcttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgc 34610584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 603
Target Start/End: Complemental strand, 45828319 - 45828202
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtgggact 585  Q
    ||||||||||||||||| ||  |||||||| |||| |||||||  |||||| ||  |  |||||||| ||||||| | || | |  ||| ||||||||||    
T  45828319 tggttgggcctaacacaaccccacaaaacctgcttgtgaggtggagattgcccccacttataaacacatgttcaggccatcttttgtccgatgtgggact 45828220  T
Q  586 ctttaacacacaccctca 603  Q
    ||||||||||| ||||||    
T  45828219 ctttaacacaccccctca 45828202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 644
Target Start/End: Original strand, 13574785 - 13574852
Alignment:
Q  576 atgtgggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    ||||||||||||||||||||| |||||| | | | ||||||| ||||||||| |||||| |||||||||    
T  13574785 atgtgggactctttaacacactccctcacgactagcactatt-gggcttggttcgtggacataaatggt 13574852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 50052540 - 50052600
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| ||| |||||||||||    
T  50052540 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgc 50052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 644
Target Start/End: Complemental strand, 21888719 - 21888557
Alignment:
Q  481 atttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatcccatgtg 580  Q
    |||| ||||| |||| |||||||||  ||||||||| |||||||||||  |||||| | |    ||||||| | ||||||   || ||||| ||   |||    
T  21888719 atttttggttcggcccaacacagccccacaaaaccgacttatgaggtgtagattgcccatagttataaacattcgttcaggtcatctctcaaccaccgtg 21888620  T
Q  581 ggactctttaacacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
     |||||||||||||||||  ||| | ||||||||||||||| ||| || |||||||||||||||    
T  21888619 agactctttaacacacactttcacgtccaacactattgggg-ttgatgtgtggatataaatggt 21888557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 27670402 - 27670453
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||  ||||||||||| | |||||||||||||||    
T  27670402 gtggttgggcctaacacaaccccacaaaaccggcctttgaggtgaggattgc 27670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 1800300 - 1800238
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| |||||||||| || ||||| ||  |||||||||| || |||||||||||||||    
T  1800300 tcttagaatatgtggttgggtcttacacaaccccacaaaaccggtttgtgaggtgaggattgc 1800238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 7697397 - 7697459
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||| ||||||||||| ||  |||||||| |||| |||||||| ||||||    
T  7697397 tcttagaaattgtggttaggcctaacacaaccccacaaaaccagcttgtgaggtgatgattgc 7697459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 8142407 - 8142468
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||| ||||||||| |||| ||| ||||||||||||| |||||||||||||||    
T  8142407 tcttagaaatcgtgattgggccta-cacaacctcacaaaaccggcttgtgaggtgaggattgc 8142468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 16239676 - 16239614
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||||||||||||  |  ||||||||||||| |||||||||| ||||    
T  16239676 tcttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgc 16239614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 17638319 - 17638257
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||   ||||||| |||| |||||||||||||||    
T  17638319 tcttagaaatcgtggttgggcctaacacaacccctcaaaaccagcttgtgaggtgaggattgc 17638257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 23708223 - 23708285
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| || ||||| |||| |||||||||  || ||||||||||||| |||||||||||||||    
T  23708223 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgc 23708285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 23726679 - 23726741
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| || ||||| |||| |||||||||  || ||||||||||||| |||||||||||||||    
T  23726679 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgc 23726741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 23745135 - 23745197
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| || ||||| |||| |||||||||  || ||||||||||||| |||||||||||||||    
T  23745135 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgc 23745197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 24063660 - 24063722
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| || ||||| |||| |||||||||  || ||||||||||||| |||||||||||||||    
T  24063660 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgc 24063722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 31317313 - 31317251
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||| ||||||||||  |  ||||||||||||| |||||||||||||||    
T  31317313 tcttagaaatcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattgc 31317251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 35038427 - 35038489
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | |||||||||||||||||| ||  |||||||| |||| | |||||||||||||    
T  35038427 tcttagaagtcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgc 35038489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 43781668 - 43781606
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| |||||||||||||||||||| |   ||||||||| ||| ||| |||||||||||    
T  43781668 tcttagaaattgtggttgggcctaacacaactctacaaaaccgacttgtgaagtgaggattgc 43781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 45138970 - 45139032
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||| || ||||| ||  ||||||||||||| |||||||||||||||    
T  45138970 tcttagaaatcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgc 45139032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 54368601 - 54368539
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| | ||||||||| |||||||| ||  | ||||||||||| |||||||||||||||    
T  54368601 tcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgc 54368539  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 12930127 - 12930188
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||| ||| ||||| ||||    
T  12930127 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgagaattg 12930188  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 21832200 - 21832245
Alignment:
Q  491 gggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||||||| || ||| ||||||||||||| |||||||||||||||    
T  21832200 gggcctaactcatccttacaaaaccggcttgtgaggtgaggattgc 21832245  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 21888512 - 21888451
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||||||  |||||||| ||||||| | | ||||||| ||||||||||||||| ||||    
T  21888512 tcttagaatttacggttgggcgtaacacaccttcacaaaactggcttatgaggtgagaattg 21888451  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 644
Target Start/End: Complemental strand, 31151048 - 31150996
Alignment:
Q  591 acacacaccctcatgcccaacactattggggcttggtgcgtggatataaatggt 644  Q
    |||||| || ||||||||||||||||| ||||||||||| || |||||||||||    
T  31151048 acacaccccttcatgcccaacactatt-gggcttggtgcatgtatataaatggt 31150996  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 536
Target Start/End: Complemental strand, 33205553 - 33205488
Alignment:
Q  471 tattcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| ||||| | |||||||||||||||||| ||   |||||| ||||| |||||||||||||||    
T  33205553 tattcatagaaatcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgc 33205488  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 9273044 - 9272984
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||| ||||||| ||  ||||||||||||| |||||||||| ||||    
T  9273044 ttagaaatggtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgagggttgc 9272984  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 529
Target Start/End: Original strand, 13574694 - 13574738
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtga 529  Q
    |||||||||||||||||| ||  ||||||||||||| ||||||||    
T  13574694 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 13574738  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 20479092 - 20479033
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||||| ||||||||||||| |||  ||| |||||| |||||| |||||||||||||    
T  20479092 tcttagaatt-gtggttgggcctatcaccacctcacaaaaacggcttgtgaggtgaggatt 20479033  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 502
Target Start/End: Complemental strand, 41915255 - 41915227
Alignment:
Q  474 tcttagaatttgtggttgggcctaacaca 502  Q
    |||||||||||||||||||||||||||||    
T  41915255 tcttagaatttgtggttgggcctaacaca 41915227  T

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Target: scaffold0692 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 588
Target Start/End: Original strand, 5753 - 5867
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgctcctgcgcataaacacttgttcagtctatttctcatc 573  Q
    |||||||| | |||||||||||||||||| ||   |||||||||||| |||| |||||||||| ||  |  |||||||| |  |||| |||| ||| |||    
T  5753 tcttagaaatcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcagactatgtcttatc 5852  T
Q  574 ccatgtgggactctt 588  Q
    | |||||||||||||    
T  5853 cgatgtgggactctt 5867  T

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Target: scaffold0692; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 5543 - 5605
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||| || ||||||||||||||||| ||   |||||||||||| ||| |||||||||||    
T  5543 tcttagaaattatggttgggcctaacacaaccccgcaaaaccggcttgtgaagtgaggattgc 5605  T

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Target: scaffold0400 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 3928 - 3868
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| ||||||||| |||||||||| ||  ||||||| ||||| |||||||||||||||    
T  3928 ttagaaattgtggttgtgcctaacacaaccccacaaaactggcttgtgaggtgaggattgc 3868  T

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Target: scaffold0365 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 4572 - 4512
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| ||||||||| |||||||||| ||  ||||||| ||||| |||||||||||||||    
T  4572 ttagaaattgtggttgtgcctaacacaaccccacaaaactggcttgtgaggtgaggattgc 4512  T

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Target: scaffold0181 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 21024 - 20964
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggatt 534  Q
    |||||||| | |||||||||| ||||||| ||  ||||||||||||| |||||||||||||    
T  21024 tcttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggatt 20964  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 56542 - 56482
Alignment:
Q  476 ttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| | |||||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  56542 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgc 56482  T

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Target: scaffold0766 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 536
Target Start/End: Complemental strand, 6348 - 6297
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||||||||||||||| ||  |||||| |||||| |||||||||||||||    
T  6348 gtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgc 6297  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 4440 - 4490
Alignment:
Q  486 tggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    |||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 4490  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 535
Target Start/End: Complemental strand, 14377 - 14327
Alignment:
Q  485 gtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattg 535  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||| |||||    
T  14377 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattg 14327  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 12732 - 12670
Alignment:
Q  474 tcttagaatttgtggttgggcctaacacagcctaacaaaaccggcttatgaggtgaggattgc 536  Q
    ||||| || |||||||||||||||||||| ||  |||||| || ||| |||||||||||||||    
T  12732 tcttaaaaattgtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgc 12670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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