View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0217Ase5 (Length: 114)
Name: NF0217Ase5
Description: NF0217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0217Ase5 |
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Alignment Details
Target: chr1 (Bit Score: 80; Significance: 5e-38; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 80; E-Value: 5e-38
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 41158457 - 41158363
Alignment:
| Q |
7 |
taataatgacacagagaatgacaa--ctaaaattgtacccttttttgttattgtttgtttcttatgcattttattatctcgtgaggcatcaatgg |
99 |
Q |
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| T |
41158457 |
taataatgacacagagaatgacaaaactaaaattggacccttttttgttattgtttgtttcttatgcattttattatctcgtgaggcatcaatgg |
41158363 |
T |
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