View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0217Eco5 (Length: 547)

Name: NF0217Eco5
Description: NF0217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0217Eco5
NF0217Eco5
[»] chr4 (60 HSPs)
chr4 (11-544)||(53865232-53865766)
chr4 (11-62)||(8165765-8165817)
chr4 (11-62)||(25715716-25715768)
chr4 (11-70)||(36309606-36309666)
chr4 (11-62)||(54895407-54895459)
chr4 (11-62)||(9967685-9967736)
chr4 (10-70)||(2124339-2124400)
chr4 (11-71)||(21995664-21995725)
chr4 (10-70)||(37059706-37059767)
chr4 (11-71)||(41025055-41025116)
chr4 (11-62)||(1492675-1492727)
chr4 (11-62)||(2124534-2124586)
chr4 (11-62)||(12722927-12722979)
chr4 (11-62)||(25715646-25715698)
chr4 (11-62)||(31763097-31763149)
chr4 (15-62)||(36309419-36309467)
chr4 (11-62)||(43374450-43374502)
chr4 (11-62)||(54895572-54895624)
chr4 (10-62)||(6841824-6841877)
chr4 (11-62)||(12722740-12722793)
chr4 (11-67)||(31762927-31762984)
chr4 (11-62)||(562778-562830)
chr4 (15-62)||(8157282-8157330)
chr4 (11-62)||(33883297-33883349)
chr4 (11-62)||(33883472-33883524)
chr4 (11-62)||(36924244-36924296)
chr4 (11-62)||(37059904-37059956)
chr4 (11-62)||(53526254-53526306)
chr4 (23-69)||(33819687-33819734)
chr4 (11-61)||(51076901-51076952)
chr4 (21-62)||(17109917-17109959)
chr4 (13-62)||(30779346-30779396)
chr4 (10-62)||(38010698-38010751)
chr4 (15-62)||(9813138-9813186)
chr4 (15-62)||(10374046-10374094)
chr4 (11-62)||(16475009-16475061)
chr4 (15-62)||(17109722-17109770)
chr4 (15-62)||(43375514-43375562)
chr4 (11-62)||(47567899-47567951)
chr4 (24-74)||(10473650-10473701)
chr4 (22-72)||(22180199-22180250)
chr4 (11-69)||(38563801-38563860)
chr4 (11-61)||(42788664-42788715)
chr4 (11-49)||(562935-562973)
chr4 (22-62)||(638994-639035)
chr4 (22-62)||(11786104-11786145)
chr4 (22-62)||(11798271-11798312)
chr4 (22-62)||(13635620-13635661)
chr4 (22-62)||(15051031-15051072)
chr4 (22-62)||(30358837-30358878)
chr4 (22-62)||(30597829-30597870)
chr4 (22-62)||(45256895-45256936)
chr4 (22-62)||(49425952-49425993)
chr4 (22-62)||(49492407-49492448)
chr4 (22-62)||(50644670-50644711)
chr4 (20-56)||(9551573-9551609)
chr4 (11-71)||(27872988-27873043)
chr4 (11-62)||(36924433-36924485)
chr4 (11-62)||(53526441-53526493)
chr4 (11-62)||(53865067-53865119)
[»] chr8 (40 HSPs)
chr8 (10-69)||(32644043-32644102)
chr8 (10-62)||(35448598-35448651)
chr8 (11-62)||(1672920-1672972)
chr8 (11-62)||(15808888-15808940)
chr8 (11-72)||(23567479-23567541)
chr8 (10-62)||(27506709-27506762)
chr8 (11-62)||(17656621-17656673)
chr8 (11-62)||(21120195-21120247)
chr8 (11-62)||(23347710-23347762)
chr8 (11-62)||(23567632-23567684)
chr8 (17-62)||(17792887-17792933)
chr8 (11-62)||(185884-185936)
chr8 (11-62)||(186070-186122)
chr8 (11-62)||(10586050-10586102)
chr8 (11-62)||(15809829-15809881)
chr8 (11-46)||(5106724-5106759)
chr8 (23-69)||(18757329-18757376)
chr8 (15-49)||(28979299-28979333)
chr8 (11-44)||(17792714-17792747)
chr8 (11-48)||(28979448-28979485)
chr8 (11-58)||(10585867-10585915)
chr8 (11-43)||(17656807-17656839)
chr8 (11-70)||(21120313-21120373)
chr8 (11-62)||(34343252-34343304)
chr8 (11-62)||(34343440-34343492)
chr8 (15-62)||(204937-204983)
chr8 (15-62)||(319774-319820)
chr8 (11-46)||(1773110-1773145)
chr8 (11-41)||(32644236-32644266)
chr8 (22-56)||(40246548-40246582)
chr8 (11-62)||(45409408-45409461)
chr8 (22-62)||(1209786-1209827)
chr8 (22-62)||(4835521-4835562)
chr8 (11-62)||(18161291-18161344)
chr8 (22-62)||(23397443-23397484)
chr8 (11-48)||(23504512-23504549)
chr8 (18-62)||(24473240-24473285)
chr8 (22-62)||(34633216-34633257)
chr8 (22-62)||(39657711-39657752)
chr8 (23-62)||(35301632-35301672)
[»] chr3 (39 HSPs)
chr3 (11-75)||(50416553-50416618)
chr3 (11-71)||(36185894-36185955)
chr3 (11-62)||(8036803-8036855)
chr3 (11-70)||(36185721-36185781)
chr3 (11-74)||(47225837-47225901)
chr3 (11-62)||(50416483-50416535)
chr3 (11-71)||(12974006-12974067)
chr3 (11-62)||(19012551-19012603)
chr3 (11-70)||(47924157-47924220)
chr3 (11-62)||(8036978-8037030)
chr3 (11-62)||(21175257-21175309)
chr3 (11-62)||(27446202-27446254)
chr3 (15-62)||(47924359-47924407)
chr3 (11-57)||(30794857-30794904)
chr3 (16-62)||(38345283-38345330)
chr3 (13-62)||(12974182-12974231)
chr3 (11-72)||(49053218-49053280)
chr3 (11-59)||(47729245-47729294)
chr3 (11-71)||(49053415-49053476)
chr3 (11-62)||(16653500-16653551)
chr3 (11-62)||(19012395-19012446)
chr3 (21-71)||(16276663-16276714)
chr3 (11-61)||(20127162-20127213)
chr3 (15-62)||(49450560-49450606)
chr3 (22-56)||(53595583-53595617)
chr3 (22-62)||(2941821-2941862)
chr3 (22-62)||(3475302-3475343)
chr3 (22-62)||(6097579-6097620)
chr3 (22-62)||(8719137-8719178)
chr3 (22-62)||(9071024-9071065)
chr3 (22-62)||(9106397-9106438)
chr3 (22-62)||(9595875-9595916)
chr3 (22-62)||(19284801-19284842)
chr3 (22-62)||(30947806-30947847)
chr3 (22-62)||(47225763-47225804)
chr3 (22-62)||(50755192-50755233)
chr3 (22-62)||(54379292-54379333)
chr3 (23-62)||(10986483-10986523)
chr3 (23-62)||(34562402-34562442)
[»] chr1 (45 HSPs)
chr1 (11-70)||(42134122-42134182)
chr1 (11-70)||(45849103-45849163)
chr1 (11-62)||(17893075-17893127)
chr1 (11-70)||(18928944-18929004)
chr1 (10-70)||(18952402-18952463)
chr1 (11-62)||(14229350-14229402)
chr1 (11-74)||(17811272-17811336)
chr1 (11-62)||(32595107-32595159)
chr1 (15-62)||(33156995-33157043)
chr1 (11-57)||(14389852-14389899)
chr1 (11-68)||(9628588-9628646)
chr1 (11-60)||(18928783-18928833)
chr1 (11-62)||(1395340-1395392)
chr1 (11-62)||(9041040-9041092)
chr1 (11-62)||(10974636-10974688)
chr1 (11-62)||(14229175-14229227)
chr1 (11-62)||(17893262-17893314)
chr1 (11-70)||(29945405-29945465)
chr1 (15-62)||(31763966-31764014)
chr1 (11-62)||(32143758-32143810)
chr1 (11-62)||(33157169-33157221)
chr1 (11-70)||(46590553-46590613)
chr1 (11-45)||(12796618-12796652)
chr1 (11-62)||(11354500-11354552)
chr1 (11-62)||(12070599-12070651)
chr1 (22-62)||(18618965-18619005)
chr1 (22-62)||(25888924-25888964)
chr1 (11-62)||(31763778-31763830)
chr1 (11-62)||(32595272-32595324)
chr1 (11-62)||(42133947-42133999)
chr1 (11-62)||(45849298-45849350)
chr1 (11-62)||(49992521-49992573)
chr1 (16-62)||(12796426-12796473)
chr1 (22-56)||(44261192-44261226)
chr1 (22-62)||(16976085-16976126)
chr1 (22-62)||(23817440-23817481)
chr1 (22-62)||(24636056-24636097)
chr1 (22-62)||(43452672-43452713)
chr1 (22-62)||(48762226-48762267)
chr1 (22-62)||(49936832-49936873)
chr1 (11-48)||(49992707-49992744)
chr1 (22-62)||(4097113-4097153)
chr1 (11-62)||(14390033-14390085)
chr1 (11-62)||(46590748-46590800)
chr1 (11-62)||(47693855-47693907)
[»] chr5 (43 HSPs)
chr5 (11-69)||(7286943-7287001)
chr5 (11-62)||(11660971-11661023)
chr5 (11-62)||(39861769-39861821)
chr5 (11-75)||(3340580-3340645)
chr5 (11-71)||(39086511-39086572)
chr5 (11-62)||(20134202-20134254)
chr5 (11-62)||(20134388-20134440)
chr5 (11-62)||(22830777-22830829)
chr5 (11-62)||(23155528-23155580)
chr5 (11-62)||(35662070-35662122)
chr5 (11-70)||(35662222-35662282)
chr5 (11-62)||(39861582-39861634)
chr5 (11-62)||(15059622-15059675)
chr5 (11-62)||(5630260-5630312)
chr5 (15-71)||(11376574-11376630)
chr5 (11-62)||(11660796-11660848)
chr5 (11-62)||(16552250-16552302)
chr5 (15-62)||(22671990-22672038)
chr5 (11-62)||(22695529-22695581)
chr5 (11-62)||(39166329-39166381)
chr5 (11-62)||(42746522-42746574)
chr5 (14-71)||(20696319-20696377)
chr5 (11-71)||(36864061-36864122)
chr5 (10-70)||(36864256-36864317)
chr5 (11-62)||(703733-703785)
chr5 (15-62)||(15559052-15559100)
chr5 (11-62)||(23155832-23155884)
chr5 (11-62)||(25671277-25671329)
chr5 (15-58)||(39166158-39166202)
chr5 (10-49)||(42746831-42746870)
chr5 (11-49)||(20696145-20696183)
chr5 (22-56)||(35915992-35916026)
chr5 (22-62)||(3883930-3883971)
chr5 (23-56)||(7183914-7183947)
chr5 (22-62)||(14394598-14394639)
chr5 (22-62)||(14940251-14940292)
chr5 (10-62)||(15559121-15559174)
chr5 (22-62)||(26637732-26637773)
chr5 (22-62)||(37456810-37456851)
chr5 (15-62)||(5411749-5411797)
chr5 (15-62)||(7286756-7286804)
chr5 (10-46)||(33857374-33857410)
chr5 (11-62)||(39086695-39086747)
[»] chr2 (33 HSPs)
chr2 (10-70)||(30777290-30777351)
chr2 (11-71)||(31783787-31783848)
chr2 (11-70)||(42364682-42364742)
chr2 (11-62)||(31711688-31711739)
chr2 (10-70)||(15252834-15252895)
chr2 (11-71)||(31711504-31711565)
chr2 (11-62)||(20661584-20661636)
chr2 (11-62)||(34726607-34726659)
chr2 (11-70)||(37867344-37867404)
chr2 (11-62)||(42364495-42364547)
chr2 (17-70)||(16111700-16111754)
chr2 (11-71)||(22596493-22596554)
chr2 (15-71)||(34726789-34726846)
chr2 (11-62)||(12449057-12449109)
chr2 (11-62)||(15253009-15253061)
chr2 (11-62)||(19246665-19246717)
chr2 (11-62)||(20661399-20661451)
chr2 (11-62)||(22596307-22596359)
chr2 (11-62)||(25575326-25575378)
chr2 (11-62)||(44915480-44915532)
chr2 (15-71)||(37867148-37867205)
chr2 (11-62)||(15150280-15150332)
chr2 (11-62)||(20194016-20194068)
chr2 (11-62)||(22588321-22588373)
chr2 (15-62)||(24183590-24183638)
chr2 (11-49)||(22588507-22588545)
chr2 (22-56)||(37072723-37072757)
chr2 (22-56)||(39548533-39548567)
chr2 (22-62)||(7487149-7487190)
chr2 (22-62)||(25193991-25194032)
chr2 (11-62)||(31783971-31784026)
chr2 (22-62)||(39355165-39355206)
chr2 (11-62)||(12449232-12449284)
[»] scaffold0516 (1 HSPs)
scaffold0516 (11-62)||(1237-1289)
[»] scaffold0249 (2 HSPs)
scaffold0249 (11-62)||(23547-23599)
scaffold0249 (13-62)||(23726-23776)
[»] chr7 (41 HSPs)
chr7 (11-70)||(34227671-34227731)
chr7 (11-62)||(44426601-44426653)
chr7 (11-70)||(44426788-44426848)
chr7 (11-62)||(5728869-5728921)
chr7 (11-62)||(26945703-26945755)
chr7 (11-62)||(46004344-46004396)
chr7 (11-62)||(46004524-46004576)
chr7 (11-62)||(32604724-32604776)
chr7 (11-62)||(38837543-38837595)
chr7 (11-62)||(38837718-38837770)
chr7 (15-62)||(43742252-43742300)
chr7 (11-50)||(5728696-5728735)
chr7 (11-49)||(5728642-5728680)
chr7 (10-48)||(7843537-7843575)
chr7 (11-48)||(31192545-31192582)
chr7 (11-71)||(41065762-41065823)
chr7 (11-62)||(6620622-6620674)
chr7 (11-51)||(7843708-7843748)
chr7 (11-62)||(7845086-7845138)
chr7 (11-62)||(26945517-26945569)
chr7 (11-62)||(31365274-31365326)
chr7 (11-62)||(34227865-34227917)
chr7 (11-62)||(41065958-41066010)
chr7 (11-70)||(45478503-45478563)
chr7 (11-72)||(6620787-6620848)
chr7 (22-56)||(32089956-32089990)
chr7 (10-62)||(924500-924553)
chr7 (22-62)||(15973863-15973904)
chr7 (22-62)||(30884117-30884158)
chr7 (22-62)||(34228608-34228649)
chr7 (22-62)||(35737078-35737119)
chr7 (22-62)||(41911007-41911048)
chr7 (22-62)||(46358650-46358691)
chr7 (22-62)||(46572577-46572618)
chr7 (22-62)||(47340277-47340318)
chr7 (22-62)||(48692050-48692091)
chr7 (23-62)||(11732045-11732085)
chr7 (23-62)||(16933138-16933178)
chr7 (23-62)||(16938521-16938561)
chr7 (11-43)||(31365459-31365491)
chr7 (23-62)||(31660200-31660240)
[»] chr6 (21 HSPs)
chr6 (11-62)||(22857666-22857718)
chr6 (11-71)||(10698571-10698632)
chr6 (11-71)||(25119459-25119520)
chr6 (11-62)||(21384978-21385030)
chr6 (11-62)||(22857491-22857543)
chr6 (10-62)||(14237781-14237834)
chr6 (11-62)||(7371087-7371139)
chr6 (15-70)||(19281278-19281334)
chr6 (11-62)||(19284374-19284426)
chr6 (11-62)||(20522837-20522889)
chr6 (11-62)||(21384792-21384844)
chr6 (11-62)||(25119109-25119161)
chr6 (15-71)||(26713167-26713223)
chr6 (11-72)||(10588942-10589004)
chr6 (11-71)||(20522663-20522724)
chr6 (22-62)||(1449672-1449713)
chr6 (22-62)||(6900933-6900974)
chr6 (22-62)||(15493304-15493345)
chr6 (22-62)||(34869958-34869999)
chr6 (24-56)||(4338082-4338114)
chr6 (23-62)||(15034992-15035032)
[»] scaffold0102 (3 HSPs)
scaffold0102 (11-62)||(33619-33671)
scaffold0102 (11-43)||(15599-15631)
scaffold0102 (11-62)||(33806-33857)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-62)||(51908-51956)
[»] scaffold0004 (1 HSPs)
scaffold0004 (11-62)||(96002-96054)
[»] scaffold0129 (1 HSPs)
scaffold0129 (13-62)||(20111-20161)
[»] scaffold0031 (2 HSPs)
scaffold0031 (11-71)||(80856-80917)
scaffold0031 (11-45)||(80688-80722)
[»] scaffold0664 (1 HSPs)
scaffold0664 (11-62)||(3143-3195)
[»] scaffold0126 (1 HSPs)
scaffold0126 (11-71)||(37627-37688)
[»] scaffold0117 (1 HSPs)
scaffold0117 (12-62)||(17860-17910)
[»] scaffold0571 (1 HSPs)
scaffold0571 (22-62)||(548-589)
[»] scaffold0338 (1 HSPs)
scaffold0338 (22-62)||(6513-6554)
[»] scaffold0074 (1 HSPs)
scaffold0074 (22-62)||(24404-24445)
[»] scaffold0019 (1 HSPs)
scaffold0019 (15-62)||(72695-72743)


Alignment Details
Target: chr4 (Bit Score: 411; Significance: 0; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 11 - 544
Target Start/End: Original strand, 53865232 - 53865766
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataagcgcgcccaaaatgcactacgctagggtaatttcttggtaactagta 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53865232 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgcccaaaatgcactacgctagggtaatttcttggtaactagta 53865331  T
Q  110 atttcgcttgaacgcaatcactttttcttatttgaattttagatttctgcttgcacttgttttatccatgacaacagccctttctgcaattcgtattgtt 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||    
T  53865332 atttcgctcgaacgcaatcactttttcttatttgaattttagatttctgcttgcgcttgctttatccatggcaacagacctttctgcaattcgtattgtt 53865431  T
Q  210 gtcgccggcgacaaggaaccggcaagtctagtctaatcactacttttgccaccggaaaccctgttaaggatgtgccgacggtactcttatccacccgact 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  53865432 gtcgccggcgacaaggaaccggcaagtctagtctaatcactacttttgccaccggaaatcctgttaaggatgtgccgccggtactcttatccacccgact 53865531  T
Q  310 gcctaaacatctgtctccggatggcgtacgaatcacaatcatcgacacctcttctcagtatcaaaatatctgtgnnnnnnnnnnnnnnnnnnnnatcaaa 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||                    ||||||    
T  53865532 gcctaaacatctgtctccggatggcgtacgaatcacaatcatcgacacctcttcccggtatcaaaacatctgtgttttatttttacatttttttatcaaa 53865631  T
Q  410 atatgagtagcttgaggatcaagaaaccttttaggatttatttgtattgatatttcactttattttgttgttgttgctgtagtcctgaggactgttttaa 509  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53865632 atatgtatagcttgaggatcaagaaaccttttaggatttatttgtattgatatttcactttattttgttgttgttgctgtagtcctgaggactgttttaa 53865731  T
Q  510 agttggcgaacaactaagacgagctgatgcaattg 544  Q
    |||||| ||||||||||||||||||||||||||||    
T  53865732 agttggtgaacaactaagacgagctgatgcaattg 53865766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 8165817 - 8165765
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8165817 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 8165765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 25715716 - 25715768
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25715716 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataa 25715768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 36309606 - 36309666
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccc 70  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  36309606 aaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataaccgcgccc 36309666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 54895459 - 54895407
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54895459 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataa 54895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 9967736 - 9967685
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  9967736 aaaccatttctgaatttatgcagggtgcataaggattccttatgcaccataa 9967685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2124400 - 2124339
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||| || ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  2124400 taaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 2124339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 21995725 - 21995664
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  21995725 aaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 21995664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 37059767 - 37059706
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  37059767 taaaacatttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgcgccc 37059706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 41025116 - 41025055
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataagcgcgccca 71  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  41025116 aaaccatttctgaatttatgcagggtgcataaggatttcattatgtaccataaccgcgccca 41025055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 1492727 - 1492675
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  1492727 aaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataa 1492675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 2124534 - 2124586
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  2124534 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataa 2124586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 12722927 - 12722979
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  12722927 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataa 12722979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 25715698 - 25715646
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  25715698 aaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataa 25715646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 31763097 - 31763149
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31763097 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 31763149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 36309467 - 36309419
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36309467 catttctggatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 43374502 - 43374450
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  43374502 aaaccatttctggatttatgcagggtacataaggatttccttatgcaccataa 43374450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 54895572 - 54895624
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  54895572 aaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataa 54895624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 6841877 - 6841824
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  6841877 taaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 6841824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 12722793 - 12722740
Alignment:
Q  11 aaaccatttctggatttatgc-agggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  12722793 aaaccatttctggatttatgcaagggtgcataaggatttccttatgcaccataa 12722740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 31762984 - 31762927
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcg 67  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||    
T  31762984 aaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgcg 31762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 562830 - 562778
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  562830 aaaccatttctgaatttatgcagggtgcatagggatttccttatgcaccataa 562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 8157282 - 8157330
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  8157282 catttctagatttatgcagggtgcataaggatttccttatgcaccataa 8157330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 33883349 - 33883297
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  33883349 aaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataa 33883297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 33883472 - 33883524
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  33883472 aaaccatttttggatttatgcagggtgcataatgatttccttatgcaccataa 33883524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 36924296 - 36924244
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36924296 aaactatttttggatttatgcagggtgcataaggatttccttatgcaccataa 36924244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 37059904 - 37059956
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  37059904 aaaccatttctgaatttatgcagggtgcataaggattttcttatgtaccataa 37059956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 53526306 - 53526254
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  53526306 aaaccatttctggatttatgcaaagtgcataaggattttcttatgcaccataa 53526254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 33819734 - 33819687
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcc 69  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgcc 33819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 51076952 - 51076901
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccata 61  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  51076952 aaaccatttatagatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 17109917 - 17109959
Alignment:
Q  21 tggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  17109917 tggatttatgcagggtgcataaggatttccttatgcaccataa 17109959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 30779396 - 30779346
Alignment:
Q  13 accatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  30779396 accatttatggatttatgcaaggtgcataaggatttccttatgcaccataa 30779346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 38010698 - 38010751
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||| ||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  38010698 taaactatttctgaatttatgcagggtgcataaggatttccgtatgcaccataa 38010751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 9813138 - 9813186
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  9813138 catttctgaatttatgcagggtgcataaagatttccttatgcaccataa 9813186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 10374094 - 10374046
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  10374094 catttctggatttatgcagggtgcataaagatttccttatacaccataa 10374046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 16475009 - 16475061
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  16475009 aaaccatttatggatttatgcaggatgcataaagatttccttatgcaccataa 16475061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 17109770 - 17109722
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  17109770 catttctggatttatgcaaggtacataaggatttccttatgcaccataa 17109722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 43375514 - 43375562
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  43375514 catttctgaatttatgcagggtgcataaggatttccgtatgcaccataa 43375562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 47567951 - 47567899
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||| ||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  47567951 aaactatttctggatttatgcaaggtgcataaggattttcttattcaccataa 47567899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10473650 - 10473701
Alignment:
Q  24 atttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaaaa 74  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||| |||||||    
T  10473650 atttatgcacggtgcataaggatttccttatgcaccataaccgctcccaaaa 10473701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 22180250 - 22180199
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaa 72  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||| |||||    
T  22180250 ggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccaa 22180199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 38563860 - 38563801
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcc 69  Q
    ||||||||| |||||||||||||| || |||||||||| ||||||||| |||| ||||||    
T  38563860 aaaccatttatggatttatgcaggatgtataaggatttccttatgcactataaccgcgcc 38563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 42788664 - 42788715
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccata 61  Q
    |||| |||||| |||||||||||| ||||||||||||| |||||||||||||    
T  42788664 aaactatttcttgatttatgcaggatgcataaggatttccttatgcaccata 42788715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 562935 - 562973
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc 49  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  562935 aaaccatttctagatttatgcagggttcataaggatttc 562973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 638994 - 639035
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  638994 ggatttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 11786104 - 11786145
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  11786104 ggatttatgcacggtgcataaggatttccttatgcaccataa 11786145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 11798271 - 11798312
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  11798271 ggatttatgcacggtgcataaggatttccttatgcaccataa 11798312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 13635661 - 13635620
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  13635661 ggatttatgcacggtgcataaggatttccttatgcaccataa 13635620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 15051072 - 15051031
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  15051072 ggatttatgcacggtgcataaggatttccttatgcaccataa 15051031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 30358837 - 30358878
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  30358837 ggatttatgcacggtgcataaggatttccttatgcaccataa 30358878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 30597829 - 30597870
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  30597829 ggatttatgcacggtgcataaggatttccttatgcaccataa 30597870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 45256895 - 45256936
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  45256895 ggatttatgcacggtgcataaggatttccttatgcaccataa 45256936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 49425993 - 49425952
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  49425993 ggatttatgcacggtgcataaggatttccttatgcaccataa 49425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 49492448 - 49492407
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  49492448 ggatttatgcacggtgcataaggatttccttatgcaccataa 49492407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 50644670 - 50644711
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  50644670 ggatttatgcacggtgcataaggatttccttatgcaccataa 50644711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 9551609 - 9551573
Alignment:
Q  20 ctggatttatgcagggtgcataaggatttcttatgca 56  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  9551609 ctggacttatgcagggtgcataaggattccttatgca 9551573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 27872988 - 27873043
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttcttatgcaccataagcgcgccca 71  Q
    |||||||||||| ||||||||||||||||||     |||||||||||||||| ||| ||||    
T  27872988 aaaccatttctgaatttatgcagggtgcata-----ttcttatgcaccataaccgcaccca 27873043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 36924433 - 36924485
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||| | ||||| ||||| ||||||||||||||    
T  36924433 aaaccatttatggatttatgcaggatacataaagatttccttatgcaccataa 36924485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 53526441 - 53526493
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| | ||||||||||||| |||||| |||| ||||||||||||||    
T  53526441 aaaccatttcggaatttatgcagggtacataagaatttccttatgcaccataa 53526493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 53865119 - 53865067
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||||||| |||||    
T  53865119 aaaccatttctagatttatgcagagtgcataaagatttccttatgcatcataa 53865067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 32644102 - 32644043
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggatttcttatgcaccataagcgcgcc 69  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32644102 taaaccatttctggatttatgcagggtgcataaggattccttatgcaccataaccgcgcc 32644043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 35448598 - 35448651
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35448598 taaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 35448651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 1672920 - 1672972
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1672920 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 1672972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 15808940 - 15808888
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15808940 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataa 15808888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 23567541 - 23567479
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaa 72  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||    
T  23567541 aaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgcacccaa 23567479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 27506762 - 27506709
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  27506762 taaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataa 27506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 17656673 - 17656621
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  17656673 aaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataa 17656621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 21120247 - 21120195
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  21120247 aaaccatttctggatttatgcatggtgcataaggatttcattatgcaccataa 21120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 23347710 - 23347762
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23347710 aaaccatttctggatttatgcagggttcataaggattttcttatgcaccataa 23347762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 23567632 - 23567684
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  23567632 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataa 23567684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 17792887 - 17792933
Alignment:
Q  17 tttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  17792887 tttctggatttatgcagggtgcataaggatttccttatgcaccataa 17792933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 185936 - 185884
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  185936 aaaccatttctgaatttatgcagagtgcataaggatttccttatgcaccataa 185884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 186070 - 186122
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  186070 aaaccatttctggatttatacagggtgcataaggatttccttatacaccataa 186122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 10586050 - 10586102
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  10586050 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcatcataa 10586102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 15809829 - 15809881
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  15809829 aaaccatttctgaatttatggagggtgcataaggatttccttatgcaccataa 15809881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 5106724 - 5106759
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggat 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  5106724 aaaccatttctggatttatgcagggtgcataaggat 5106759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 18757329 - 18757376
Alignment:
Q  23 gatttatgcagggtgcataaggatttc-ttatgcaccataagcgcgcc 69  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18757329 gatttatgcagggtgcataaggatttctttatgcaccataaccgcgcc 18757376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 28979333 - 28979299
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttc 49  Q
    |||||||||||||||||||||||||||||||||||    
T  28979333 catttctggatttatgcagggtgcataaggatttc 28979299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 17792747 - 17792714
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagg 44  Q
    ||||||||||||||||||||||||||||||||||    
T  17792747 aaaccatttctggatttatgcagggtgcataagg 17792714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 28979448 - 28979485
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt 48  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28979448 aaaccatttctggatttatgcagagtgcataaggattt 28979485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 10585915 - 10585867
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcacc 58  Q
    ||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  10585915 aaaccatttctagatttatgcatggtgcataaggattttcttatgcacc 10585867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 17656807 - 17656839
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataag 43  Q
    |||||||||||||||||||||||||||||||||    
T  17656807 aaaccatttctggatttatgcagggtgcataag 17656839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 21120313 - 21120373
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccc 70  Q
    ||||||||||||||||||| ||||||||||||| | ||||||| ||||||||  |||||||    
T  21120313 aaaccatttctggatttatacagggtgcataagaattttcttacgcaccatagccgcgccc 21120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 34343304 - 34343252
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||    
T  34343304 aaaccatttctgaatttatgtagggtgcataaagatttccttatgcaccataa 34343252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 34343440 - 34343492
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||||  |||| ||||||||||||||    
T  34343440 aaaccatttctgaatttatgcagggtgcataataatttccttatgcaccataa 34343492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 204983 - 204937
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  204983 catttctgaatttatgcagggtgcataagaatttc-tatgcaccataa 204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 319820 - 319774
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  319820 catttctgaatttatgcagggtgcataagaatttc-tatgcaccataa 319774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 1773145 - 1773110
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggat 46  Q
    ||||||||||||||| ||||||||||||||||||||    
T  1773145 aaaccatttctggatgtatgcagggtgcataaggat 1773110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 41
Target Start/End: Original strand, 32644236 - 32644266
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcata 41  Q
    |||||||||||||||||||||||||||||||    
T  32644236 aaaccatttctggatttatgcagggtgcata 32644266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 40246582 - 40246548
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  40246582 ggatttatgcagggtgcataaggattccttatgca 40246548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 45409461 - 45409408
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt--cttatgcaccataa 62  Q
    ||||||||| | |||||||| |||||||||||||||||  ||||||||||||||    
T  45409461 aaaccattttttgatttatgtagggtgcataaggattttccttatgcaccataa 45409408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 1209786 - 1209827
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  1209786 ggatttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 4835562 - 4835521
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  4835562 ggatttatgcacggtgcataaggatttccttatgcaccataa 4835521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 18161344 - 18161291
Alignment:
Q  11 aaaccatttctggattta-tgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  18161344 aaactatttctggatttaatgtagggtgcataaggatttccttatgcaccataa 18161291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 23397443 - 23397484
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  23397443 ggatttatgcatggtgcataaggatttccttatgcaccataa 23397484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 23504549 - 23504512
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt 48  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  23504549 aaaccatttctgaatttatacagggtgcataaggattt 23504512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 24473240 - 24473285
Alignment:
Q  18 ttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||    
T  24473240 ttctgaatttatacagggtgcataaggatttccttatgcaccataa 24473285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 34633257 - 34633216
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  34633257 ggatttatgcacggtgcataaggatttccttatgcaccataa 34633216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 39657752 - 39657711
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  39657752 ggatttatgcacggtgcataaggatttccttatgcaccataa 39657711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 35301672 - 35301632
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  35301672 gatttatgcacggtgcataaggatttccttatgcaccataa 35301632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 50416553 - 50416618
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaaaat 75  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  50416553 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccaaaat 50416618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 36185894 - 36185955
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  36185894 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 36185955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 8036855 - 8036803
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8036855 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 8036803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 36185781 - 36185721
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  36185781 aaaccatttctggatttatgcaggatgcataaggatttccttatgcaccataaccgcgccc 36185721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 47225837 - 47225901
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaaaa 74  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||    
T  47225837 aaaccatttctggatttatgcagggtacataaggatttccttatgcaccataactgcgcccaaaa 47225901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 50416535 - 50416483
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50416535 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 50416483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 12974067 - 12974006
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  12974067 aaacaatttctggatttaggcagggtgcataaggatttccttatgcaccataaccgcgccca 12974006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 19012551 - 19012603
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19012551 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataa 19012603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 47924220 - 47924157
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga----tttcttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||||||    || |||||||||||||| |||||||    
T  47924220 aaaccatttctggatttatgcagggtgcataaggaatatttccttatgcaccataaccgcgccc 47924157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 8036978 - 8037030
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||    
T  8036978 aaaccatttttggatttatgcagggtgcataaggatttcctcatgcaccataa 8037030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 21175257 - 21175309
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  21175257 aaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 21175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 27446202 - 27446254
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  27446202 aaaccatttctgaatttatgcaaggtgcataaggatttccttatgcaccataa 27446254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 47924359 - 47924407
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  47924359 catttcttgatttatgcagggtgcataaggatttccttatgcaccataa 47924407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 30794904 - 30794857
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcac 57  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  30794904 aaaccatttctagatttatgcagggtgcataaggatttccttatgcac 30794857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 38345330 - 38345283
Alignment:
Q  16 atttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  38345330 atttctggatttatgcagggtgcataaagatttctttatgcaccataa 38345283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 12974182 - 12974231
Alignment:
Q  13 accatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  12974182 accatttctggatttatgca-ggtgcataaggatttccttatgcaccataa 12974231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 49053280 - 49053218
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaa 72  Q
    |||||||||||| |||||||| ||||||||||| |||| ||||||||||||||  ||||||||    
T  49053280 aaaccatttctgaatttatgccgggtgcataagaatttccttatgcaccataactgcgcccaa 49053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 47729245 - 47729294
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcacca 59  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  47729245 aaaccatttctgaatttatgtagggtgcataaggatttccttatgcacca 47729294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 49053415 - 49053476
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||| |||||||||||||||||||||| |||| ||||| |||||||||||||| ||| ||||    
T  49053415 aaactatttctggatttatgcagggtggataaagatttccttatgcaccataaccgcaccca 49053476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 16653551 - 16653500
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  16653551 aaaccatttctggatttatgca-ggtgcataagaatttccttatgcaccataa 16653500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 19012446 - 19012395
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  19012446 aaaccatttctggatttatgca-ggtgcataagaatttccttatgcaccataa 19012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 16276714 - 16276663
Alignment:
Q  21 tggatttatgcagggtgcataaggatttc-ttatgcaccataagcgcgccca 71  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||| ||||    
T  16276714 tggatttatgcacggtgcataaggatttctttatgcaccataaccgctccca 16276663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20127162 - 20127213
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccata 61  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  20127162 aaactatttctgaatttatgcagggtgcataaggattttcttatgcatcata 20127213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 49450560 - 49450606
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||    
T  49450560 catttctgaatttatgcagggtgcataagg-ttccttatgcaccataa 49450606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 53595583 - 53595617
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  53595583 ggatttatgcagggtgcataaggattccttatgca 53595617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 2941862 - 2941821
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  2941862 ggatttatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 3475343 - 3475302
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  3475343 ggatttatgcacggtgcataaggatttccttatgcaccataa 3475302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 6097620 - 6097579
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  6097620 ggatttatgcacggtgcataaggatttccttatgcaccataa 6097579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 8719137 - 8719178
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  8719137 ggatttatgcacggtgcataaggatttccttatgcaccataa 8719178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 9071024 - 9071065
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  9071024 ggatttatgcacggtgcataaggatttccttatgcaccataa 9071065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 9106397 - 9106438
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  9106397 ggatttatgcacggtgcataaggatttccttatgcaccataa 9106438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 9595916 - 9595875
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  9595916 ggatttatgcacggtgcataaggatttccttatgcaccataa 9595875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 19284801 - 19284842
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  19284801 ggatttatgcacggtgcataaggatttccttatgcaccataa 19284842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 30947847 - 30947806
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  30947847 ggatttatgcacggtgcataaggatttccttatgcaccataa 30947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 47225804 - 47225763
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  47225804 ggatttatgcagggtgcataaggatttgtttatgcaccataa 47225763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 50755192 - 50755233
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  50755192 ggatttatgcacggtgcataaggatttccttatgcaccataa 50755233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 54379292 - 54379333
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  54379292 ggatttatgcacggtgcataaggatttccttatgcaccataa 54379333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 10986483 - 10986523
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  10986483 gatttatgcacggtgcataaggatttccttatgcaccataa 10986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 34562442 - 34562402
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  34562442 gatttatgcacggtgcataaggatttccttatgcaccataa 34562402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 9e-19; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 42134122 - 42134182
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  42134122 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 42134182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 45849163 - 45849103
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  45849163 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataatcgcgccc 45849103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 17893127 - 17893075
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17893127 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 17893075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 18928944 - 18929004
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  18928944 aaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 18929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 18952463 - 18952402
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataagcgcgccc 70  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||    
T  18952463 taaaccatttctggatttatgtagggtgcataaggatttctttatgcacgataaccgcgccc 18952402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 14229350 - 14229402
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14229350 aaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataa 14229402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 17811272 - 17811336
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaaaa 74  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||| ||||    
T  17811272 aaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgcgccaaaaa 17811336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 32595159 - 32595107
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  32595159 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataa 32595107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 33157043 - 33156995
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33157043 catttctggatttatgcagggtgcataaggatttccttatgcaccataa 33156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 14389899 - 14389852
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcac 57  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  14389899 aaaccatttctggatttatgcagggtgcataaggatttccttatgcac 14389852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 9628588 - 9628646
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgc 68  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  9628588 aaacaattactggatttatgcagggtgcataaggatttccttatgcaccataaccgcgc 9628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 18928833 - 18928783
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccat 60  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  18928833 aaaccaattctggatttatgcagggtgcataaggatttccttatgcaccat 18928783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 1395340 - 1395392
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  1395340 aaaccatttctgaatttatgcatggtgcataaggatttccttatgcaccataa 1395392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 9041040 - 9041092
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  9041040 aaaccatttctgaaattatgcagggtgcataaggatttccttatgcaccataa 9041092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 10974688 - 10974636
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  10974688 aaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataa 10974636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 14229227 - 14229175
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  14229227 aaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataa 14229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 17893262 - 17893314
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17893262 aaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 17893314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 29945405 - 29945465
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||  |||||||||| |||||||||||||| |||||||||||||| |||||||    
T  29945405 aaaccatttctaaatttatgcagagtgcataaggatttccttatgcaccataaccgcgccc 29945465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 31763966 - 31764014
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  31763966 catttctggatttatgtagggtgcataaggatttccttatgcaccataa 31764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 32143758 - 32143810
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  32143758 aaaccatttctagatttatgcagagtgcataaggatttccttatgcaccataa 32143810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 33157169 - 33157221
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  33157169 aaaccatttctggatttatgcagggtgcataatgatttccttatccaccataa 33157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 46590613 - 46590553
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccc 70  Q
    |||||||||||||||| ||||||| |||||||| | ||||||||||||||||| |||||||    
T  46590613 aaaccatttctggattaatgcaggatgcataagaattttcttatgcaccataatcgcgccc 46590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 12796618 - 12796652
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga 45  Q
    |||||||||||||||||||||||||||||||||||    
T  12796618 aaaccatttctggatttatgcagggtgcataagga 12796652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 11354500 - 11354552
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| || |||||||||| |||||||||||||| ||||||||||||||    
T  11354500 aaaccatttatgaatttatgcagagtgcataaggatttgcttatgcaccataa 11354552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 12070599 - 12070651
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| | |||||||||||||||||||| |||| ||||||||||||||    
T  12070599 aaaccatttcggaatttatgcagggtgcataagaatttccttatgcaccataa 12070651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 18618965 - 18619005
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  18618965 ggatttatgcacggtgcataaggattccttatgcaccataa 18619005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 25888964 - 25888924
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  25888964 ggatttatgcacggtgcataaggattccttatgcaccataa 25888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 31763830 - 31763778
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| || |||||||||||||| |||||||||| ||||||||||||||    
T  31763830 aaaccatttttgaatttatgcagggtgtataaggatttccttatgcaccataa 31763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 32595272 - 32595324
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| |||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  32595272 aaacaatttctagatttaagcagggtgcataaggatttccttatgcaccataa 32595324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 42133999 - 42133947
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| |||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  42133999 aaactatttctagatttatgcaggatgcataaggatttccttatgcaccataa 42133947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 45849298 - 45849350
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| |||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  45849298 aaactatttatggatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 49992573 - 49992521
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| |||||||| || |||||||||||||| ||||||||||||||    
T  49992573 aaaccatttctagatttatgaagtgtgcataaggatttccttatgcaccataa 49992521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 12796473 - 12796426
Alignment:
Q  16 atttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  12796473 atttctggatttatgcaaggtgcagaaggatttccttatgcaccataa 12796426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 44261192 - 44261226
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  44261192 ggatttatgcagggtgcataaggattccttatgca 44261226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 16976085 - 16976126
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  16976085 ggatttatgcacggtgcataaggatttccttatgcaccataa 16976126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 23817440 - 23817481
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  23817440 ggatttatgcacggtgcataaggatttccttatgcaccataa 23817481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 24636056 - 24636097
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  24636056 ggatttatgcacggtgcataaggatttccttatgcaccataa 24636097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 43452672 - 43452713
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  43452672 ggatttatgcacggtgcataaggatttccttatgcaccataa 43452713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 48762267 - 48762226
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  48762267 ggatttatgcacggtgcataaggatttccttatgcaccataa 48762226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 49936873 - 49936832
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  49936873 ggatttatgcacggtgcataaggatttccttatgcaccataa 49936832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 49992707 - 49992744
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt 48  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  49992707 aaaccatttctgaatttatgcagggtgcataagaattt 49992744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 4097153 - 4097113
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    ||||||| ||| |||||||||||||| ||||||||||||||    
T  4097153 ggatttaagcacggtgcataaggattccttatgcaccataa 4097113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 14390033 - 14390085
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagg-atttcttatgcaccataa 62  Q
    |||||||||||  ||||||||||||||||||||| | | ||||||||||||||    
T  14390033 aaaccatttctaaatttatgcagggtgcataaggaaatccttatgcaccataa 14390085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 46590748 - 46590800
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| | ||||||| |||||||||||| ||||| ||||||||||||||    
T  46590748 aaaccatttatcgatttatacagggtgcataaagatttccttatgcaccataa 46590800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 47693855 - 47693907
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||  ||||||||||| ||||| |||||||| |||||    
T  47693855 aaaccatttctggatttataaagggtgcataaagatttccttatgcatcataa 47693907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 7286943 - 7287001
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttcttatgcaccataagcgcgcc 69  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  7286943 aaaccatttccggatttatgcagggtgcataaggattccttatgcaccataaccgcgcc 7287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 11660971 - 11661023
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11660971 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 11661023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39861769 - 39861821
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39861769 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 39861821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3340645 - 3340580
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaaaat 75  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  3340645 aaaccatttctaaatttatgcagggtgcataaggatttccttatgcaccataaccgcacccaaaat 3340580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 39086572 - 39086511
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccca 71  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  39086572 aaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgcaccca 39086511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 20134254 - 20134202
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  20134254 aaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataa 20134202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 20134388 - 20134440
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  20134388 aaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataa 20134440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 22830777 - 22830829
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22830777 aaaccatttctggatttatgcagtgtgcataaggatttccttatgcaccataa 22830829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 23155580 - 23155528
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  23155580 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 23155528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 35662122 - 35662070
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  35662122 aaaccatttctggatttatgtagggtgcataaggatttccttatgcaccataa 35662070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 35662222 - 35662282
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  35662222 aaaccatttatggatttatgcagggtgcataagtatttccttatgcaccataaccgcgccc 35662282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 39861634 - 39861582
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  39861634 aaaccatttctggatttatgcagggtgcataaggatttccttatgccccataa 39861582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 15059622 - 15059675
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataa-ggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15059622 aaaccatttctggatttatgcagggtgcataagggatttccttatgcaccataa 15059675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 5630260 - 5630312
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  5630260 aaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 5630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 11376574 - 11376630
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttcttatgcaccataagcgcgccca 71  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  11376574 catttctgaatttatgcagtgtgcataaggattccttatgcaccataactgcgccca 11376630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 11660848 - 11660796
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  11660848 aaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccataa 11660796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 16552302 - 16552250
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  16552302 aaaccatttctgaatttatgcagggtgcatacggatttccttatgcaccataa 16552250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 22671990 - 22672038
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22671990 catttctggatttatgcaggatgcataaggatttccttatgcaccataa 22672038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 22695529 - 22695581
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  22695529 aaactatttctggatttatgcaaggtgcataaggatttccttatgcaccataa 22695581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39166329 - 39166381
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  39166329 aaaccatttctaaatttatgcagggtgcataaggattttcttatgcaccataa 39166381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 42746574 - 42746522
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  42746574 aaaccatttctggatttatgcaggattcataaggatttccttatgcaccataa 42746522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 20696319 - 20696377
Alignment:
Q  14 ccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||||| ||| ||||    
T  20696319 ccatttatggatttatgcagggtgaataaggatttccttatgcaccataaccgcaccca 20696377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 36864122 - 36864061
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    ||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||| ||||    
T  36864122 aaaccatttctagatttatgcagtgtgcataagaatttccttatgcaccataaccgcaccca 36864061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 36864256 - 36864317
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||| |||||||| |||||||    
T  36864256 taaatcatttctgaatttatgcagagtgcataaggatttccttatacaccataaccgcgccc 36864317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 703785 - 703733
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  703785 aaaccatttctaaatttatgcaggatgcataaggatttccttatgcaccataa 703733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 15559100 - 15559052
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  15559100 catttctgaatttatgcatggtgcataaggatttccttatgcaccataa 15559052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 23155832 - 23155884
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    |||| |||| |||||||||||| |||||||||||||||| |||||||||||||    
T  23155832 aaacaatttttggatttatgcaaggtgcataaggatttcattatgcaccataa 23155884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 25671277 - 25671329
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||    
T  25671277 aaaccatttctgaatttatgcatggtacataaggatttccttatgcaccataa 25671329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 39166202 - 39166158
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcacc 58  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  39166202 catttctggatttatgcagggtgcataagaatttccttatgcacc 39166158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 42746831 - 42746870
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggatttc 49  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  42746831 taaaccatttctgaatttatgcagggtgcataaagatttc 42746870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 20696183 - 20696145
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc 49  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  20696183 aaaccatttctggatttatgtagggtacataaggatttc 20696145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 35915992 - 35916026
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  35915992 ggatttatgcagggtgcataaggattccttatgca 35916026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 3883971 - 3883930
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  3883971 ggatttatgcacggtgcataaggatttccttatgcaccataa 3883930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 7183914 - 7183947
Alignment:
Q  23 gatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||| |||||||||    
T  7183914 gatttatgcagggtgcataaggatgtcttatgca 7183947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 14394598 - 14394639
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  14394598 ggatttatgcacggtgcataaggatttccttatgcaccataa 14394639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 14940292 - 14940251
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  14940292 ggatttatgcacggtgcataaggatttccttatgcaccataa 14940251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 15559121 - 15559174
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||| |||||||||||| |||||| |||||| ||||||||||||||    
T  15559121 taaatcatttctagatttatgcaggatgcatacggatttccttatgcaccataa 15559174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 26637773 - 26637732
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  26637773 ggatttatgcacggtgcataaggatttccttatgcaccataa 26637732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 37456810 - 37456851
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  37456810 ggatttatgcatggtgcataaggatttccttatgcaccataa 37456851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 5411749 - 5411797
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  5411749 catttctgaatttatgaagggtgcataagaatttccttatgcaccataa 5411797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 7286804 - 7286756
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||| ||||||||||||||||||| ||||| ||||| ||||||||    
T  7286804 catttctgaatttatgcagggtgcataaagatttccttatacaccataa 7286756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 33857410 - 33857374
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggat 46  Q
    |||||||||| |||||||||| |||||||||||||||    
T  33857410 taaaccatttttggatttatgaagggtgcataaggat 33857374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39086695 - 39086747
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||| ||  |||||||||||||| ||||||||||||||    
T  39086695 aaaccatttctagatttatacatagtgcataaggatttccttatgcaccataa 39086747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 5e-17; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 30777351 - 30777290
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  30777351 taaaccatttctggatttatgcagggtgcataaggatttttttatgcaccataaccgcgccc 30777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 31783848 - 31783787
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  31783848 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 31783787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 42364682 - 42364742
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  42364682 aaaccatttctggatttatgcagggtgcataaggatttccttttgcaccataaccgcgccc 42364742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 31711688 - 31711739
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttcttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  31711688 aaaccatttctgaatttatgcagggtgcatgaggatttcttatgcaccataa 31711739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 15252895 - 15252834
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||||||    
T  15252895 taaaccatttctggatttatgcagggtgcataaggatttccttatgcactatagtcgcgccc 15252834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 31711565 - 31711504
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||    
T  31711565 aaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgcaccca 31711504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 20661584 - 20661636
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  20661584 aaaccatttctggatttatgcagggtgcataatgatttccttatgcaccataa 20661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 34726659 - 34726607
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  34726659 aaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataa 34726607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 37867344 - 37867404
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  37867344 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccgtaaccgcgccc 37867404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 42364547 - 42364495
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  42364547 aaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataa 42364495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 16111700 - 16111754
Alignment:
Q  17 tttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  16111700 tttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 16111754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 22596493 - 22596554
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||    
T  22596493 aaacaatttctggatttatgcagggtacataaggatttccttatgcaccataaccgcaccca 22596554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 34726789 - 34726846
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||    
T  34726789 catttctggatttatgcagggtgcataagaatttccttatgcaccataaccgcaccca 34726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 12449109 - 12449057
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  12449109 aaaccatttctgaatttatgcagtgtgcataaggatttccttatgcaccataa 12449057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 15253009 - 15253061
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  15253009 aaaccatttctgaatttatgcagggtgcataaggatttcgttatacaccataa 15253061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 19246717 - 19246665
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  19246717 aaacaatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 19246665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 20661451 - 20661399
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||||    
T  20661451 aaaccatttatagatttatgcagggtgcataaggatttccttatgcaccataa 20661399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22596359 - 22596307
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  22596359 aaaccaattctggatttatgcagggtgcataaggatttccttatacaccataa 22596307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 25575378 - 25575326
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  25575378 aaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataa 25575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 44915480 - 44915532
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  44915480 aaacaatttctggatttatgcagggtgcataagcatttccttatgcaccataa 44915532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 37867205 - 37867148
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||| ||| ||||    
T  37867205 catttctgaatttatgcagggtggataaggatttccttatgcaccataaccgcaccca 37867148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 15150280 - 15150332
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||| |||||| ||||||||||| |||||||||| |||||||||||||||||    
T  15150280 aaaccttttctgaatttatgcaggatgcataaggattttcttatgcaccataa 15150332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 20194016 - 20194068
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| |||||||| |||||||||||| |||| ||||||||||||||    
T  20194016 aaaccatttctagatttatgtagggtgcataagaatttccttatgcaccataa 20194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22588373 - 22588321
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagg-atttcttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||| | | ||||||||||||||    
T  22588373 aaaccatttctgaatttatgcagggtgcataaggaaatccttatgcaccataa 22588321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 24183590 - 24183638
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  24183590 cattcctgaatttatgcagggtgcataaggatttccttatgcaccataa 24183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 22588507 - 22588545
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc 49  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  22588507 aaactatttctggatttatgtagggtgcataaggatttc 22588545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 37072723 - 37072757
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  37072723 ggatttatgcagggtgcataaggattccttatgca 37072757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 39548533 - 39548567
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  39548533 ggatttatgcagggtgcataaggattccttatgca 39548567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 7487190 - 7487149
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  7487190 ggatttatgcacggtgcataaggatttccttatgcaccataa 7487149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 25193991 - 25194032
Alignment:
Q  22 ggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  25193991 ggatttatgcacggtgcataaggatttcattatgcaccataa 25194032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 31783971 - 31784026
Alignment:
Q  11 aaaccatttctggatttatgcag---ggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||   ||||||||||||||| ||||||||||||||    
T  31783971 aaaccatttctgaatttatgcagggtggtgcataaggatttccttatgcaccataa 31784026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 39355165 - 39355206
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  39355165 ggatttatgcacggtgcataaggatttccttatgcaccataa 39355206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 12449232 - 12449284
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||  ||||||||| ||||||||| ||||| ||||||||||||||    
T  12449232 aaaccatttctaaatttatgcaaggtgcataaagatttccttatgcaccataa 12449284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 1237 - 1289
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1237 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 23599 - 23547
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23599 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 23547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 23726 - 23776
Alignment:
Q  13 accatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||    
T  23726 accatttatcgatttatgcagggtgcataaggatttccttatgcaccataa 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 34227731 - 34227671
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  34227731 aaaccatttctggatttatgcaggttgcataaggatttccttatgcaccataaccgcgccc 34227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 44426653 - 44426601
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44426653 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataa 44426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 44426788 - 44426848
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  44426788 aaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 44426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 5728869 - 5728921
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  5728869 aaaccatttctggatttatgcagggtgcataagaattttcttatgcaccataa 5728921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 26945703 - 26945755
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26945703 aaactatttctggatttatgcagggtgcataaggatttccttatgcaccataa 26945755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 46004396 - 46004344
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  46004396 aaaccatttctggatttatgcagagtgcataaggatttcgttatgcaccataa 46004344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 46004524 - 46004576
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  46004524 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 46004576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 32604776 - 32604724
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  32604776 aaaccatttctgaatttatgcagggtgcataaagattttcttatgcaccataa 32604724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 38837595 - 38837543
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  38837595 aaaccatttctgaatttatgcagggtgcataaggatttccgtatgcaccataa 38837543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 38837718 - 38837770
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  38837718 aaaccatttttggatttatgcaaggtgcataaggatttccttatgcaccataa 38837770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 43742300 - 43742252
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  43742300 catttctggatttatgcaggatgcataaggatttccttatgcaccataa 43742252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 5728735 - 5728696
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttct 50  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  5728735 aaaccatttctgaatttatgcagggtgcataaggatttct 5728696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 5728680 - 5728642
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc 49  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5728680 aaaccatttctggatttatgcaaggtgcataaggatttc 5728642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 7843575 - 7843537
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt 48  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7843575 taaaccatttctggatttatgcagcgtgcataaggattt 7843537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 31192545 - 31192582
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt 48  Q
    |||||||||||||||||||||||| |||||||||||||    
T  31192545 aaaccatttctggatttatgcaggatgcataaggattt 31192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 41065823 - 41065762
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||||||  ||||||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  41065823 aaaccatttctaaatttatgcaggatgcataaagattttcttatgcaccataaccgcgccca 41065762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 6620674 - 6620622
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    ||||||||| ||||||||||||  ||||||||||||||| |||||||||||||    
T  6620674 aaaccatttatggatttatgcatagtgcataaggatttcgttatgcaccataa 6620622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 7843708 - 7843748
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttctt 51  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  7843708 aaaccatttctgaatttatgcaggttgcataaggatttctt 7843748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 7845086 - 7845138
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  7845086 aaaccatttctaaatttatgcaggttgcataaggatttccttatgcaccataa 7845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 26945569 - 26945517
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  26945569 aaacaatttctggatatatgcagggtgcataagaatttccttatgcaccataa 26945517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 31365326 - 31365274
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||| | ||||||||||||| ||||||||||||||    
T  31365326 aaaccatttatggatttatgcaagatgcataaggatttccttatgcaccataa 31365274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 34227865 - 34227917
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| || |||||||||||||||||||| |||| ||||||||||||||    
T  34227865 aaaccatttatgaatttatgcagggtgcataagaatttccttatgcaccataa 34227917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 41065958 - 41066010
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||  ||||||||||||| ||||||||||| ||||||||||||||    
T  41065958 aaaccatttctaaatttatgcagggtacataaggatttccttatgcaccataa 41066010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 45478503 - 45478563
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccc 70  Q
    |||| ||| ||||||||||||| | |||||||||| ||||||||||||||||| |||||||    
T  45478503 aaacaattactggatttatgcaagatgcataaggattttcttatgcaccataaccgcgccc 45478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 6620787 - 6620848
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggatttc-ttatgcaccataagcgcgcccaa 72  Q
    ||||||||| ||||| || ||||||| |||||||||||| ||||||||||||| |||||||||    
T  6620787 aaaccatttgtggatgtacgcagggt-cataaggatttccttatgcaccataaccgcgcccaa 6620848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 32089990 - 32089956
Alignment:
Q  22 ggatttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||||| ||||||||    
T  32089990 ggatttatgcagggtgcataaggattccttatgca 32089956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 924553 - 924500
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||||| ||||||||| |||| |||| ||||| ||||||||||||||    
T  924553 taaaccatttctgaatttatgcaaggtgtataaagatttccttatgcaccataa 924500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 15973904 - 15973863
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  15973904 ggatttatgcatggtgcataaggatttccttatgcaccataa 15973863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 30884158 - 30884117
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  30884158 ggatttatgcacggtgcataaggatttccttatgcaccataa 30884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 34228649 - 34228608
Alignment:
Q  22 ggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  34228649 ggatttatgcacggtgcataaggattttcttatgcaccataa 34228608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 35737078 - 35737119
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  35737078 ggatttatgcacggtgcataaggatttccttatgcaccataa 35737119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 41911048 - 41911007
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  41911048 ggatttatgcacggtgcataaggatttccttatgcaccataa 41911007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 46358650 - 46358691
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  46358650 ggatttatgcacggtgcataaggatttccttatgcaccataa 46358691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 46572618 - 46572577
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  46572618 ggatttatgcatggtgcataaggatttccttatgcaccataa 46572577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 47340277 - 47340318
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  47340277 ggatttatgcacggtgcataaggatttccttatgcaccataa 47340318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 48692050 - 48692091
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  48692050 ggatttatgcacggtgcataaggatttccttatgcaccataa 48692091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 11732085 - 11732045
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  11732085 gatttatgcacggtgcataaggatttccttatgcaccataa 11732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 16933178 - 16933138
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  16933178 gatttatgcacggtgcataaggatttccttatgcaccataa 16933138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 16938561 - 16938521
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  16938561 gatttatgcacggtgcataaggatttccttatgcaccataa 16938521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 31365459 - 31365491
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataag 43  Q
    ||||||||| |||||||||||||||||||||||    
T  31365459 aaaccatttatggatttatgcagggtgcataag 31365491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 31660200 - 31660240
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  31660200 gatttatgcacggtgcataaggatttccttatgcaccataa 31660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 22857666 - 22857718
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22857666 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataa 22857718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 10698632 - 10698571
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  10698632 aaaccatttcttgatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccca 10698571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 25119459 - 25119520
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  25119459 aaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgcaccca 25119520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 21384978 - 21385030
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  21384978 aaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataa 21385030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22857543 - 22857491
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  22857543 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 22857491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 14237834 - 14237781
Alignment:
Q  10 taaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  14237834 taaacaatttctggatttatgtagggtgcataaggatttccttatgcaccataa 14237781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 7371087 - 7371139
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  7371087 aaaccatttctggatttaagcagggtgcataaagattttcttatgcaccataa 7371139  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 19281334 - 19281278
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccc 70  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||    
T  19281334 catttctgaatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 19281278  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 19284426 - 19284374
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||||    
T  19284426 aaaccatttttagatttatgcagggtgcataaggatttccttatgcaccataa 19284374  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 20522837 - 20522889
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  20522837 aaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccataa 20522889  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 21384844 - 21384792
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  21384844 aaaccatttctggatttatgcaggatgcataagaatttccttatgcaccataa 21384792  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 25119161 - 25119109
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  25119161 aaaccatttctgaatttatgcagggtgcataagaatttccttatgcaccataa 25119109  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 26713167 - 26713223
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttcttatgcaccataagcgcgccca 71  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||| ||| ||||    
T  26713167 catttctgaatttatatagggtgcataaggatttcttatgcaccataaccgcaccca 26713223  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 10588942 - 10589004
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgcccaa 72  Q
    |||| |||| || ||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  10588942 aaactatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgcacccaa 10589004  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 20522724 - 20522663
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    |||||||||||| |||||||||||||||||||  |||| |||||||||||||| | ||||||    
T  20522724 aaaccatttctgaatttatgcagggtgcataaatatttccttatgcaccataaccacgccca 20522663  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 1449672 - 1449713
Alignment:
Q  22 ggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  1449672 ggatttatgcacggtgcataaggattttcttatgcaccataa 1449713  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 6900933 - 6900974
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  6900933 ggatttatgcacggtgcataaggatttccttatgcaccataa 6900974  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 15493304 - 15493345
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  15493304 ggatttatgcacggtgcataaggatttccttatgcaccataa 15493345  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 34869999 - 34869958
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  34869999 ggatttatgcacggtgcataaggatttccttatgcaccataa 34869958  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 4338114 - 4338082
Alignment:
Q  24 atttatgcagggtgcataaggatttcttatgca 56  Q
    |||||||||||||||||||||||| ||||||||    
T  4338114 atttatgcagggtgcataaggattccttatgca 4338082  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 15034992 - 15035032
Alignment:
Q  23 gatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  15034992 gatttatgcacggtgcataaggatttccttatgcaccataa 15035032  T

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Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 33671 - 33619
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  33671 aaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataa 33619  T

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Target: scaffold0102; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 15631 - 15599
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataag 43  Q
    ||||||||||||||||||||||| |||||||||    
T  15631 aaaccatttctggatttatgcagagtgcataag 15599  T

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Target: scaffold0102; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 33806 - 33857
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||| |||||||||||| |||||||||| |||| ||||||||||||||    
T  33806 aaaccatttttggatttatgca-ggtgcataagaatttccttatgcaccataa 33857  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 51956 - 51908
Alignment:
Q  15 catttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51956 catttctggatttatgcagggtgcataaggatttccttatgcaccataa 51908  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 96054 - 96002
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  96054 aaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataa 96002  T

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Target: scaffold0129 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 20111 - 20161
Alignment:
Q  13 accatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  20111 accatttctgaatttatgcagggtgcataaggatttccttatgcaccataa 20161  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 80856 - 80917
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataagcgcgccca 71  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  80856 aaaccatttctgaatttttgcagggtgcataaggattttcttatgcaccataaccgcaccca 80917  T

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Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 80722 - 80688
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataagga 45  Q
    ||||||||||||||||||||| |||||||||||||    
T  80722 aaaccatttctggatttatgcggggtgcataagga 80688  T

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Target: scaffold0664 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 3143 - 3195
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  3143 aaaccatttctggatttatgcagggtgcataaagatttccttatgcacgataa 3195  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 37688 - 37627
Alignment:
Q  11 aaaccatttctggatttatgcagggtgcataaggattt-cttatgcaccataagcgcgccca 71  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||| |||| ||| ||||    
T  37688 aaaccatttatggatttatgtagggtgcataaggatttccttatgcacaataaccgcaccca 37627  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 17910 - 17860
Alignment:
Q  12 aaccatttctggatttatgcagggtgcataagga-tttcttatgcaccataa 62  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||||    
T  17910 aaccatttctggatttatgca-ggtgcataatgattttcttatgcaccataa 17860  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 589 - 548
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  589 ggatttatgcacggtgcataaggatttccttatgcaccataa 548  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 6513 - 6554
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  6513 ggatttatgcatggtgcataaggatttccttatgcaccataa 6554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 24404 - 24445
Alignment:
Q  22 ggatttatgcagggtgcataaggattt-cttatgcaccataa 62  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  24404 ggatttatgcacggtgcataaggatttccttatgcaccataa 24445  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 72695 - 72743
Alignment:
Q  15 catttctggatttatgcagggtgcataaggatttc-ttatgcaccataa 62  Q
    |||||||  |||||||||| ||||||||||||||| |||||||||||||    
T  72695 catttctaaatttatgcagagtgcataaggatttcgttatgcaccataa 72743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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